Prupe.2G080900_v2.0.a1

Domain of unknown function

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
12469989 .. 12474521
4533 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G080900.1

Sequence Viewer

Length: 2127 bp
ATGGCCGTCTCCGCAGATGCAGCTGTTGTGGAAGTTCTTGATAGCAGTAACTATGTGGATTGGAGTGTATTGGTTAAAAATTACTTGTTGGCTCAAGACCTTTGGGATGTAGTGGAACAAGACGAAGAAGAAGAAGACGAAGAGGAAGAAGAAGCGGATGATAAGTTCAAAGCTTGGAGGAAGAAGAATGCCACGGCTTTACATAAAATCCAAATTTTGTGCGGGCGGGAAGCTTTTTCCCTCATTAGAAACGCCACTTCAGCCAAACGCGCTTGGGATACTTTGGCAGAAAAGTTCAAGCGAAAACCAGATGCTGCAATTGCTGCCAAGCATGATCCGTATCAACCTTTCTTCGCTGCTGTTAAGCTTGGTGATTGGCGTAAAGCGAAGGAATTTCTTACCCGAGATCCCAATGCAATAAGAGCAAGATATTCAACAGGAGGGACAGCTCTTCACATTGCAACCAAGTTCGGACATGAGCATATTGTGGAAGAGTTGGTTCAGTTGATGACACCGGAAGACTTGGAAATGCAAGATGTTACTTGGACAGCTCTTCATCTTGCTGCAAGATTAAATCTCAAAATGGTTGAATGCATGGTTAGAAAGAACAAGAAACTACTTGGCATTGTTGAAGAGTCCCACCGTCTGACACCAATTCTCTTCGCTGCTAAGAATGACTTATGGGATATCGTTCGTTATCTCTACTCCGTCACTCCGATCCAAGACCTAATGCCAGAGAATGGCCCTTATGGCGCTGGACTTGTTTGCTTTTGTTTACTAGCCAAACAATTTGATATTGCGTGGGAATTACTTCAGCGTTGCCCACGATTGGTAATTACTAAAGATGTTGTGGGAACATCCCCTATACGTGCATTGGCTGGCATCCCTTCTGCATTTCCGAGTGGGACGCCGCTCAAATTCTGGGAAAAATGGATCTATGATGGCATACACATACAACATCCTCCTGCCATCCATGATGTTCACGTCAATGTTGAAAATCTAGAAGAGAAACTGGGCAACCAAAATATCAGTTTCTCAGTCTTCGGTTTCACGCAAGGGCCTTCTTCAAGCCTCTGCAAGCTTTTAGGAATCAACCGCATATGTGAAATGAAATTGATCCACGCTCGATCCCTAGATATTTTGGATTACATGTGTGAAGTGGTAAAACATCTAGACACTCAAGAAATGGAAGATGGCCTTGTCTATGCAGCAATATTCCGAGCTGTACAAAGGGGGATTATTGAGTTCGTTATTCGTTTATGTAAAGTAGATCCGGATATATTGTGGAAAACAAATTCAATGGGAAGGAACATCTTTCAGTATTCAATTGAGTGTCGCCAGGAAAAAGTATATAGCCTCATATATGGGGTTGGTCAGAGAAATCTTATTGCAACATTTTCAGATGCTTCTGGAAATGATATGCTACATCTTGCAGGGATGCTATCTCCAACAGAAAAACTTGATCTTATTTCAGGTGCAGCCTTGCAAATGCAGAGAGAAAGACAATGGTTCAAGGAGGTGAAAAGTCTTGTAGTTTTACCCTCGGGAGTGGGAGCTTTCAATAAACAGGGTATGAGACCCCATGAACTATTTACCCAGAACCATAATAAATTGAAGGAAGAAGGAGAAAAGTGGATGAAAGATGCAGCAACCTCTTGTACAGTTGTAGGTGCTCTCACTATTACCATCATGTTTGCTGCAGCCTTCACGGTGCCTGGTGGAAACAATGGAGGAACAGGCTTTCCCTTGTTCTTAGATGAAAAGATGTTTTTGGTTTTTATAGTTTCAGATGCTATATCACTCTTTTCTTCCACCACTTCAGTGTTGATGTTTTTGGGAATCCTTACATCACGATATGCAGAAGACGATTTTCTAAAATCCTTACCCACAAAGATGATAATCGGCCTTTCAACACTCTTGATTTCCATCGCTTCCATGATGGTTGCCTTTTGTTCTGCTCTTTTCCTTATGCTTCATGAAAAACTATGGATTGTCATTCCAATCATTTTCCTCTCCAGCGTTCCAGTCACCTTATTTATTTGGATGCAATTTCCTGTTCTTGTTGAGATTTTCATTTCTACATATGGAGGAGGGATATTTGACAAGAAAGTGAGACGGTGGATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

709

Amino Acids

79.85

Weight (kDa)

6.07

Isoelectric Point (pI)

39.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000027)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18670 AT3G18670 AT3G54065
fragaria_vesca FvH4_1g26570 FvH4_1g26570 FvH4_5g19270 FvH4_5g19273 FvH4_5g35840 FvH4_5g36340 FvH4_5g36630 FvH4_5g37181 FvH4_5g37182 FvH4_5g37185 FvH4_5g37240 FvH4_5g37260 FvH4_6g21440 FvH4_6g44571 FvH4_6g44572 FvH4_6g44610 FvH4_6g44620 FvH4_6g44650 FvH4_6g44660 FvH4_6g45151 FvH4_6g45152 FvH4_6g45152 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45154 FvH4_6g51440 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090
malus_domestica MD00G1010300.v1.1 MD00G1010400.v1.1 MD00G1010500.v1.1 MD00G1011000.v1.1 MD00G1011200.v1.1 MD00G1011500.v1.1 MD00G1011900.v1.1 MD03G1133900.v1.1 MD03G1134100.v1.1 MD09G1086300.v1.1 MD09G1086500.v1.1 MD09G1086900.v1.1 MD09G1087000.v1.1 MD09G1088000.v1.1 MD09G1088100.v1.1 MD09G1088200.v1.1 MD09G1088300.v1.1 MD09G1089000.v1.1 MD09G1089300.v1.1 MD09G1133800.v1.1 MD16G1219400.v1.1 MD17G1027900.v1.1 MD17G1028400.v1.1 MD17G1028600.v1.1 MD17G1028700.v1.1 MD17G1028900.v1.1 MD17G1029000.v1.1 MD17G1029100.v1.1 MD17G1029200.v1.1 MD17G1075400.v1.1 MD17G1076000.v1.1 MD17G1077000.v1.1 MD17G1077100.v1.1 MD17G1077800.v1.1 MD17G1078000.v1.1 MD17G1078100.v1.1 MD17G1078300.v1.1 MD17G1100900.v1.1 MD17G1101100.v1.1 MD17G1101400.v1.1 MD17G1104200.v1.1 MD17G1104500.v1.1 MD17G1121300.v1.1 MD17G1121600.v1.1 MD17G1121900.v1.1 MD17G1122700.v1.1 MD17G1218800.v1.1
prunus_persica Prupe.2G033800_v2.0.a1 Prupe.2G033900_v2.0.a1 Prupe.2G080300_v2.0.a1 Prupe.2G080700_v2.0.a1 Prupe.2G080900_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G082000_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082200_v2.0.a1 Prupe.2G082300_v2.0.a1 Prupe.2G082700_v2.0.a1 Prupe.2G082800_v2.0.a1 Prupe.2G082900_v2.0.a1 Prupe.3G235600_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236800_v2.0.a1 Prupe.3G237000_v2.0.a1 Prupe.3G237100_v2.0.a1 Prupe.3G237300_v2.0.a1 Prupe.3G237400_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.4G282500_v2.0.a1 Prupe.4G282500_v2.0.a1
pyrus_communis pycom03g08990 pycom03g09000 pycom09g01180 pycom09g01190 pycom09g01220 pycom09g01230 pycom09g01360 pycom09g01370 pycom09g01380 pycom09g01410 pycom09g05500 pycom11g10280 pycom11g10290 pycom11g10310 pycom16g18270 pycom16g18280 pycom17g02280 pycom17g02290 pycom17g02300 pycom17g02360 pycom17g02390 pycom17g02410 pycom17g02440 pycom17g02460 pycom17g02470 pycom17g02480 pycom17g02510 pycom17g02530 pycom17g02540 pycom17g02550 pycom17g02560 pycom17g02570 pycom17g02580 pycom17g02630 pycom17g02640 pycom17g04970 pycom17g04980 pycom17g05010 pycom17g07090 pycom17g07620 pycom17g07630 pycom17g07640 pycom17g07650 pycom17g07660 pycom17g07740 pycom17g07760 pycom17g07770 pycom17g09580 pycom17g11170 pycom17g11200 pycom17g11220 pycom17g11240 pycom17g11250 pycom17g11300 pycom17g11340 pycom17g11380 pycom17g11440
rosa_chinensis RchiOBHm_Chr1g0332901 RchiOBHm_Chr1g0338981 RchiOBHm_Chr1g0338991 RchiOBHm_Chr1g0341201 RchiOBHm_Chr1g0341211 RchiOBHm_Chr1g0342721 RchiOBHm_Chr1g0343191 RchiOBHm_Chr2g0146761 RchiOBHm_Chr2g0161791 RchiOBHm_Chr2g0161801 RchiOBHm_Chr2g0161841 RchiOBHm_Chr2g0162041 RchiOBHm_Chr2g0162651 RchiOBHm_Chr2g0162691 RchiOBHm_Chr2g0162701 RchiOBHm_Chr2g0162711 RchiOBHm_Chr2g0162721 RchiOBHm_Chr2g0162811 RchiOBHm_Chr2g0162831 RchiOBHm_Chr2g0162841 RchiOBHm_Chr4g0416381 RchiOBHm_Chr4g0416391 RchiOBHm_Chr5g0075981 RchiOBHm_Chr6g0276101 RchiOBHm_Chr7g0214581 RchiOBHm_Chr7g0214631 RchiOBHm_Chr7g0214651 RchiOBHm_Chr7g0214721 RchiOBHm_Chr7g0223161 RchiOBHm_Chr7g0230661 RchiOBHm_Chr7g0230751 RchiOBHm_Chr7g0230781 RchiOBHm_Chr7g0234581 RchiOBHm_Chr7g0234601 RchiOBHm_Chr7g0237561 RchiOBHm_Chr7g0237571 RchiOBHm_Chr7g0238781 RchiOBHm_Chr7g0238811 RchiOBHm_Chr7g0242161 RchiOBHm_Chr7g0242401 RchiOBHm_Chr7g0242451 RchiOBHm_Chr7g0242921 RchiOBHm_Chr7g0242981 RchiOBHm_Chr7g0243111 RchiOBHm_Chr7g0243251 RchiOBHm_Chr7g0243331
rosa_laevigata RLG00000000803 RLG00000000807 RLG00000000809 RLG00000000811 RLG00000000814 RLG00000000854 RLG00000000859 RLG00000000864 RLG00000000994 RLG00000000995 RLG00000001458 RLG00000001461 RLG00000001474 RLG00000001476 RLG00000002729 RLG00000002730 RLG00000003505 RLG00000008871 RLG00000008873 RLG00000018513 RLG00000021300 RLG00000021303 RLG00000021318 RLG00000021356 RLG00000021357 RLG00000029070 RLG00000029071 RLG00000029171 RLG00000029189 RLG00000029190 RLG00000029640 RLG00000034635
rosa_multiflora Rmu_co8149086.1_g000001 Rmu_co8460577.1_g000001 Rmu_sc0000429.1_g000062 Rmu_sc0000429.1_g000071 Rmu_sc0000429.1_g000081 Rmu_sc0000863.1_g000020 Rmu_sc0001488.1_g000011 Rmu_sc0001545.1_g000007 Rmu_sc0001849.1_g000068 Rmu_sc0001993.1_g000003 Rmu_sc0002222.1_g000002 Rmu_sc0002308.1_g000053 Rmu_sc0002308.1_g000069 Rmu_sc0002480.1_g000007 Rmu_sc0003179.1_g000041 Rmu_sc0004213.1_g000011 Rmu_sc0007101.1_g000012 Rmu_sc0008565.1_g000011 Rmu_sc0009298.1_g000003 Rmu_sc0010407.1_g000009 Rmu_sc0010407.1_g000013 Rmu_sc0026966.1_g000004 Rmu_ssc0000152.1_g000012 Rmu_ssc0000152.1_g000014 Rmu_ssc0000295.1_g000021 Rmu_ssc0000295.1_g000026
rosa_roxburghii Rroxscaffold_1G00029600 Rroxscaffold_2G00087790 Rroxscaffold_2G00087800 Rroxscaffold_2G00088360 Rroxscaffold_2G00088500 Rroxscaffold_2G00088530 Rroxscaffold_2G00088590 Rroxscaffold_3G00221570 Rroxscaffold_3G00222190 Rroxscaffold_3G00222240 Rroxscaffold_3G00222880 Rroxscaffold_3G00222900 Rroxscaffold_3G00223990 Rroxscaffold_3G00229750 Rroxscaffold_3G00229760 Rroxscaffold_3G00245140 Rroxscaffold_3G00245150 Rroxscaffold_3G00245200 Rroxscaffold_3G00253520 Rroxscaffold_3G00253530 Rroxscaffold_4G00294500 Rroxscaffold_4G00311800 Rroxscaffold_4G00311830 Rroxscaffold_4G00311850 Rroxscaffold_4G00313180 Rroxscaffold_4G00313210 Rroxscaffold_4G00316270 Rroxscaffold_4G00317910 Rroxscaffold_4G00317920 Rroxscaffold_5G00349290 Rroxscaffold_5G00349300 Rroxscaffold_5G00349310 Rroxscaffold_5G00351950 Rroxscaffold_5G00351960 Rroxscaffold_5G00353390 Rroxscaffold_7G00192540
rosa_rugosa Rorug01G0102500 Rorug01G0102600 Rorug01G0146400.1 Rorug01G0146500.1 Rorug01G0159400.1 Rorug01G0159500.1 Rorug02G0491900 Rorug02G0492000 Rorug02G0492100 Rorug02G0492200 Rorug02G0492300 Rorug02G0492400 Rorug02G0492500 Rorug02G0492700 Rorug02G0498500 Rorug02G0498600 Rorug02G0498800 Rorug04G0006900 Rorug04G0053700 Rorug06G0002000 Rorug06G0002100 Rorug07G0304700 Rorug07G0304800 Rorug07G0304800 Rorug07G0304800 Rorug07G0305300 Rorug07G0305400 Rorug07G0305500 Rorug07G0305500 Rorug07G0318300 Rorug07G0318600 Rorug07G0323600
rosa_samantha Rh1AG128900 Rh1AG162500 Rh1AG163000 Rh1AG164000 Rh1AG164700 Rh1AG173200 Rh1AG173300 Rh1AG173800 Rh1BG098100 Rh1BG129800 Rh1BG130600 Rh1BG141300 Rh1BG141500 Rh1BG141600 Rh1CG122700 Rh1CG151900 Rh1CG152400 Rh1CG153100 Rh1CG153500 Rh1CG161400 Rh1CG161600 Rh1DG134200 Rh1DG173500 Rh1DG173700 Rh2AG558100 Rh2AG558500 Rh2AG560200 Rh2AG564700 Rh2AG564800 Rh2BG465600 Rh2BG571700 Rh2BG572000 Rh2BG573500 Rh2CG439800 Rh2CG541800 Rh2CG542100 Rh2CG542200 Rh2CG543800 Rh2CG547300 Rh2DG474700 Rh2DG580600 Rh2DG580900 Rh2DG581200 Rh2DG581700 Rh2DG581800 Rh2DG583500 Rh2DG587200 Rh2DG587300 Rh2DG587400 Rh4AG128900 Rh4AG203800 Rh4AG319900 Rh4AG320000 Rh4BG122200 Rh4BG201100 Rh4CG136000 Rh4DG122400 Rh4DG201100 Rh4DG323600 Rh6BG077000 Rh6DG206200 Rh7AG282300 Rh7AG282500 Rh7AG283400 Rh7AG358600 Rh7AG414500 Rh7AG415200 Rh7AG415500 Rh7AG461700 Rh7AG469300 Rh7AG477800 Rh7BG273900 Rh7BG274000 Rh7BG390400 Rh7BG390500 Rh7BG391500 Rh7BG391800 Rh7BG408300 Rh7BG432000 Rh7BG439200 Rh7BG449200 Rh7BG449900 Rh7BG450400 Rh7BG450500 Rh7CG220900 Rh7CG301600 Rh7CG302700 Rh7CG377000 Rh7CG433900 Rh7CG434200 Rh7CG478800 Rh7DG286200 Rh7DG354000 Rh7DG424600 Rh7DG448000 Rh7DG462800 Rh7DG462900
rosa_wichuraiana Rw0G003440 Rw0G011970 Rw0G017120 Rw0G017130 Rw0G017140 Rw0G018470 Rw0G018480 Rw0G020440 Rw1G010470 Rw2G046180 Rw2G046210 Rw2G046230 Rw2G046390 Rw2G046400 Rw2G046710 Rw2G046720 Rw2G046730 Rw3G025310 Rw4G010410 Rw4G017250 Rw6G018270 Rw7G018180 Rw7G024130 Rw7G024160 Rw7G024170 Rw7G034060 Rw7G034250 Rw7G034260 Rw7G034400 Rw7G034410 Rw7G038210 Rw7G039020 Rw7G039060 Rw7G039280 Rw7G039400 Rw7G039470 Rw7G039880 Rw7G039890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1711
AccB7I CCANNNNNTGG 1 cut(s) 740
AccBSI CCGCTC 1 cut(s) 913
AccII CGCG 1 cut(s) 270
AccIII TCCGGA 1 cut(s) 1273
AciI CCGC 6 cut(s) 12, 155, 222, 226, 911, 1096
AclWI GGATC 7 cut(s) 329, 401, 712, 941, 1111, 1122, 1265
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 4 cut(s) 213, 392, 917, 1294
AcuI CTGAAG 3 cut(s) 243, 797, 1803
AcyI GRCGYC 1 cut(s) 908
AfaI GTAC 2 cut(s) 1227, 1660
AfiI CCNNNNNNNGG 2 cut(s) 740, 829
AflIII ACRYGT 1 cut(s) 1149
AjiI CACGTC 1 cut(s) 985
AjnI CCWGG 2 cut(s) 1338, 1714
AleI CACNNNNGTG 1 cut(s) 1820
AloI GAACNNNNNNTCC 4 cut(s) 149, 181, 1726, 1758
AluBI AGCT 9 cut(s) 23, 173, 233, 367, 449, 551, 1081, 1223, 1556
AluI AGCT 9 cut(s) 23, 173, 233, 367, 449, 551, 1081, 1223, 1556
Alw21I GWGCWC 1 cut(s) 1675
Alw26I GTCTC 3 cut(s) 13, 1570, 2107
AlwI GGATC 7 cut(s) 329, 401, 712, 941, 1111, 1122, 1265
AlwNI CAGNNNCTG 1 cut(s) 314
Ama87I CYCGRG 2 cut(s) 402, 1543
Aor13HI TCCGGA 1 cut(s) 1273
AoxI GGCC 5 cut(s) 3, 742, 1058, 1195, 1903
ApoI RAATTY 4 cut(s) 213, 392, 917, 1294
Asp700I GAANNNNTTC 1 cut(s) 810
AspLEI GCGC 2 cut(s) 272, 755
AspS9I GGNCC 2 cut(s) 743, 1058
AsuHPI GGTGA 3 cut(s) 383, 1531, 2020
AvaI CYCGRG 2 cut(s) 402, 1543
BanI GGYRCC 1 cut(s) 1711
BbsI GAAGAC 4 cut(s) 141, 525, 1033, 1869
Bbv12I GWGCWC 1 cut(s) 1675
BccI CCATC 6 cut(s) 935, 977, 1187, 1694, 1933, 1934
BceAI ACGGC 1 cut(s) 210
BciT130I CCWGG 2 cut(s) 1340, 1716
BciVI GTATCC 1 cut(s) 271
BcoDI GTCTC 3 cut(s) 13, 1570, 2107
BfaI CTAG 4 cut(s) 779, 1001, 1133, 1172
BfmI CTRYAG 1 cut(s) 1698
BfoI RGCGCY 1 cut(s) 756
BfuI GTATCC 1 cut(s) 271
BglI GCCNNNNNGGC 1 cut(s) 750
Bme1390I CCNGG 2 cut(s) 1340, 1716
BmeT110I CYCGRG 2 cut(s) 402, 1543
BmgBI CACGTC 1 cut(s) 985
BmgT120I GGNCC 2 cut(s) 743, 1058
BmiI GGNNCC 1 cut(s) 1713
BmrFI CCNGG 2 cut(s) 1340, 1716
BmrI ACTGGG 1 cut(s) 1022
BmsI GCATC 8 cut(s) 7, 301, 891, 1393, 1428, 1633, 1780, 2034
BmuI ACTGGG 1 cut(s) 1022
BpiI GAAGAC 4 cut(s) 141, 525, 1033, 1869
BpmI CTGGAG 1 cut(s) 1999
BpuEI CTTGAG 2 cut(s) 78, 1164
BsaAI YACGTR 1 cut(s) 869
BsaBI GATNNNNATC 3 cut(s) 339, 1898, 1925
BsaHI GRCGYC 1 cut(s) 908
BsaI GGTCTC 1 cut(s) 1570
BsaJI CCNNGG 2 cut(s) 192, 1542
BsaWI WCCGGW 2 cut(s) 514, 1273
Bsc4I CCNNNNNNNGG 2 cut(s) 740, 829
Bse1I ACTGG 2 cut(s) 1017, 2024
Bse3DI GCAATG 1 cut(s) 456
Bse8I GATNNNNATC 3 cut(s) 339, 1898, 1925
BseAI TCCGGA 1 cut(s) 1273
BseBI CCWGG 2 cut(s) 1340, 1716
BseDI CCNNGG 2 cut(s) 192, 1542
BseGI GGATG 9 cut(s) 112, 163, 857, 882, 958, 969, 1443, 1641, 2049
BseJI GATNNNNATC 3 cut(s) 339, 1898, 1925
BseLI CCNNNNNNNGG 2 cut(s) 740, 829
BseMI GCAATG 1 cut(s) 456
BseMII CTCAG 1 cut(s) 1050
BseNI ACTGG 2 cut(s) 1017, 2024
BseRI GAGGAG 1 cut(s) 2103
BsgI GTGCAG 1 cut(s) 1497
Bsh1236I CGCG 1 cut(s) 270
BshFI GGCC 5 cut(s) 5, 744, 1060, 1197, 1905
BshNI GGYRCC 1 cut(s) 1711
BsiHKAI GWGCWC 1 cut(s) 1675
BsiHKCI CYCGRG 2 cut(s) 402, 1543
BsiSI CCGG 2 cut(s) 515, 1274
BslFI GGGAC 3 cut(s) 457, 622, 919
BslI CCNNNNNNNGG 2 cut(s) 740, 829
BsmAI GTCTC 3 cut(s) 13, 1570, 2107
BsmBI CGTCTC 2 cut(s) 13, 2107
BsmFI GGGAC 3 cut(s) 457, 622, 919
BsmI GAATGC 2 cut(s) 193, 596
BsnI GGCC 5 cut(s) 5, 744, 1060, 1197, 1905
Bso31I GGTCTC 1 cut(s) 1570
BsoBI CYCGRG 2 cut(s) 402, 1543
Bsp1286I GDGCHC 1 cut(s) 1675
Bsp13I TCCGGA 1 cut(s) 1273
Bsp1407I TGTACA 2 cut(s) 1225, 1658
Bsp143I GATC 8 cut(s) 334, 406, 717, 933, 1116, 1127, 1270, 1462
BspACI CCGC 6 cut(s) 12, 155, 222, 226, 911, 1096
BspANI GGCC 5 cut(s) 5, 744, 1060, 1197, 1905
BspCNI CTCAG 1 cut(s) 1049
BspEI TCCGGA 1 cut(s) 1273
BspFNI CGCG 1 cut(s) 270
BspHI TCATGA 1 cut(s) 1975
BspLI GGNNCC 1 cut(s) 1713
BspMAI CTGCAG 1 cut(s) 1702
BspPI GGATC 7 cut(s) 329, 401, 712, 941, 1111, 1122, 1265
BspQI GCTCTTC 2 cut(s) 456, 558
BspT107I GGYRCC 1 cut(s) 1711
BspTNI GGTCTC 1 cut(s) 1570
BsrBI CCGCTC 1 cut(s) 913
BsrDI GCAATG 1 cut(s) 456
BsrGI TGTACA 2 cut(s) 1225, 1658
BsrI ACTGG 2 cut(s) 1017, 2024
BssECI CCNNGG 2 cut(s) 192, 1542
BssMI GATC 8 cut(s) 334, 406, 717, 933, 1116, 1127, 1270, 1462
BssNI GRCGYC 1 cut(s) 908
Bst2UI CCWGG 2 cut(s) 1340, 1716
Bst4CI ACNGT 4 cut(s) 644, 1663, 1711, 2118
Bst6I CTCTTC 7 cut(s) 135, 456, 486, 558, 627, 665, 999
BstACI GRCGYC 1 cut(s) 908
BstAPI GCANNNNNTGC 1 cut(s) 323
BstAUI TGTACA 2 cut(s) 1225, 1658
BstBAI YACGTR 1 cut(s) 869
BstC8I GCNNGC 3 cut(s) 224, 880, 1079
BstDEI CTNAG 3 cut(s) 669, 1036, 1753
BstDSI CCRYGG 1 cut(s) 192
BstF5I GGATG 9 cut(s) 112, 163, 857, 882, 958, 969, 1443, 1641, 2049
BstFNI CGCG 1 cut(s) 270
BstH2I RGCGCY 1 cut(s) 756
BstHHI GCGC 2 cut(s) 272, 755
BstKTI GATC 8 cut(s) 337, 409, 720, 936, 1119, 1130, 1273, 1465
BstMAI GTCTC 3 cut(s) 13, 1570, 2107
BstMBI GATC 8 cut(s) 334, 406, 717, 933, 1116, 1127, 1270, 1462
BstMWI GCNNNNNNNGC 8 cut(s) 11, 20, 260, 269, 320, 323, 422, 750
BstNI CCWGG 2 cut(s) 1340, 1716
BstNSI RCATGY 1 cut(s) 1153
BstSCI CCNGG 2 cut(s) 1338, 1714
BstSFI CTRYAG 1 cut(s) 1698
BstUI CGCG 1 cut(s) 270
BstV2I GAAGAC 4 cut(s) 141, 525, 1033, 1869
BstX2I RGATCY 3 cut(s) 406, 933, 1270
BstYI RGATCY 3 cut(s) 406, 933, 1270
BsuI GTATCC 1 cut(s) 271
BsuRI GGCC 5 cut(s) 5, 744, 1060, 1197, 1905
BtgI CCRYGG 1 cut(s) 192
BtgZI GCGATG 1 cut(s) 1912
BtrI CACGTC 1 cut(s) 985
BtsCI GGATG 9 cut(s) 112, 163, 857, 882, 958, 969, 1443, 1641, 2049
BtsIMutI CAGTG 1 cut(s) 1827
Cac8I GCNNGC 3 cut(s) 224, 880, 1079
CaiI CAGNNNCTG 1 cut(s) 314
CciI TCATGA 1 cut(s) 1975
CfoI GCGC 2 cut(s) 272, 755
Cfr13I GGNCC 2 cut(s) 743, 1058
CseI GACGC 1 cut(s) 916
Csp6I GTAC 2 cut(s) 1226, 1659
CviAII CATG 9 cut(s) 332, 476, 595, 974, 1150, 1583, 1690, 1936, 1976
CviQI GTAC 2 cut(s) 1226, 1659
DdeI CTNAG 3 cut(s) 669, 1036, 1753
DpnI GATC 8 cut(s) 336, 408, 719, 935, 1118, 1129, 1272, 1464
DpnII GATC 8 cut(s) 334, 406, 717, 933, 1116, 1127, 1270, 1462
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 7 cut(s) 135, 456, 486, 558, 627, 665, 999
EarI CTCTTC 7 cut(s) 135, 456, 486, 558, 627, 665, 999
Eco31I GGTCTC 1 cut(s) 1570
Eco32I GATATC 1 cut(s) 688
Eco57I CTGAAG 3 cut(s) 243, 797, 1803
Eco88I CYCGRG 2 cut(s) 402, 1543
EcoO109I RGGNCCY 1 cut(s) 1058
EcoRII CCWGG 2 cut(s) 1338, 1714
EcoRV GATATC 1 cut(s) 688
EcoT22I ATGCAT 1 cut(s) 596
Esp3I CGTCTC 2 cut(s) 13, 2107
FaeI CATG 9 cut(s) 335, 479, 598, 977, 1153, 1586, 1693, 1939, 1979
FalI AAGNNNNNCTT 4 cut(s) 662, 694, 1182, 1214
FaqI GGGAC 3 cut(s) 457, 622, 919
FatI CATG 9 cut(s) 331, 475, 594, 973, 1149, 1582, 1689, 1935, 1975
FauI CCCGC 2 cut(s) 215, 219
FauNDI CATATG 2 cut(s) 1100, 2083
FokI GGATG 9 cut(s) 119, 170, 844, 869, 945, 956, 1450, 1648, 2056
FspBI CTAG 4 cut(s) 779, 1001, 1133, 1172
GlaI GCGC 2 cut(s) 271, 754
GsuI CTGGAG 1 cut(s) 1999
HaeII RGCGCY 1 cut(s) 756
HaeIII GGCC 5 cut(s) 5, 744, 1060, 1197, 1905
HapII CCGG 2 cut(s) 515, 1274
HgaI GACGC 1 cut(s) 916
HhaI GCGC 2 cut(s) 272, 755
Hin1I GRCGYC 1 cut(s) 908
Hin1II CATG 9 cut(s) 335, 479, 598, 977, 1153, 1586, 1693, 1939, 1979
Hin6I GCGC 2 cut(s) 270, 753
HinP1I GCGC 2 cut(s) 270, 753
HindIII AAGCTT 4 cut(s) 171, 231, 365, 1079
HinfI GANTC 3 cut(s) 635, 1089, 1839
HpaII CCGG 2 cut(s) 515, 1274
HphI GGTGA 3 cut(s) 383, 1531, 2020
Hpy166II GTNNAC 2 cut(s) 776, 982
Hpy188I TCNGA 8 cut(s) 473, 648, 717, 900, 1220, 1377, 1402, 1789
Hpy8I GTNNAC 2 cut(s) 776, 982
HpyAV CCTTC 7 cut(s) 382, 897, 1071, 1299, 1609, 1616, 1714
HpyCH4III ACNGT 4 cut(s) 644, 1663, 1711, 2118
HpyCH4IV ACGT 2 cut(s) 868, 984
HpyF10VI GCNNNNNNNGC 8 cut(s) 11, 20, 260, 269, 320, 323, 422, 750
HpyF3I CTNAG 3 cut(s) 669, 1036, 1753
HpySE526I ACGT 2 cut(s) 868, 984
Hsp92I GRCGYC 1 cut(s) 908
Hsp92II CATG 9 cut(s) 335, 479, 598, 977, 1153, 1586, 1693, 1939, 1979
HspAI GCGC 2 cut(s) 270, 753
Kpn2I TCCGGA 1 cut(s) 1273
Kzo9I GATC 8 cut(s) 334, 406, 717, 933, 1116, 1127, 1270, 1462
LguI GCTCTTC 2 cut(s) 456, 558
LmnI GCTCC 1 cut(s) 1553
LweI GCATC 8 cut(s) 7, 301, 891, 1393, 1428, 1633, 1780, 2034
MaeI CTAG 4 cut(s) 779, 1001, 1133, 1172
MaeII ACGT 2 cut(s) 868, 984
MaeIII GTNAC 4 cut(s) 47, 538, 709, 2026
MalI GATC 8 cut(s) 336, 408, 719, 935, 1118, 1129, 1272, 1464
MbiI CCGCTC 1 cut(s) 913
MboI GATC 8 cut(s) 334, 406, 717, 933, 1116, 1127, 1270, 1462
MfeI CAATTG 2 cut(s) 318, 1326
MflI RGATCY 3 cut(s) 406, 933, 1270
MhlI GDGCHC 1 cut(s) 1675
MlyI GAGTC 1 cut(s) 644
MmeI TCCRAC 1 cut(s) 1472
Mph1103I ATGCAT 1 cut(s) 596
MroI TCCGGA 1 cut(s) 1273
MroXI GAANNNNTTC 1 cut(s) 810
MseI TTAA 3 cut(s) 75, 363, 572
MslI CAYNNNNRTG 3 cut(s) 987, 1820, 1892
MspA1I CMGCKG 1 cut(s) 23
MspI CCGG 2 cut(s) 515, 1274
MspR9I CCNGG 2 cut(s) 1340, 1716
MunI CAATTG 2 cut(s) 318, 1326
Mva1269I GAATGC 2 cut(s) 193, 596
MvaI CCWGG 2 cut(s) 1340, 1716
MvnI CGCG 1 cut(s) 270
MwoI GCNNNNNNNGC 8 cut(s) 11, 20, 260, 269, 320, 323, 422, 750
NdeI CATATG 2 cut(s) 1100, 2083
NdeII GATC 8 cut(s) 334, 406, 717, 933, 1116, 1127, 1270, 1462
NlaIII CATG 9 cut(s) 335, 479, 598, 977, 1153, 1586, 1693, 1939, 1979
NlaIV GGNNCC 1 cut(s) 1713
NmuCI GTSAC 2 cut(s) 709, 2026
NsiI ATGCAT 1 cut(s) 596
NspI RCATGY 1 cut(s) 1153
OliI CACNNNNGTG 1 cut(s) 1820
PagI TCATGA 1 cut(s) 1975
PciI ACATGT 1 cut(s) 1149
PciSI GCTCTTC 2 cut(s) 456, 558
PctI GAATGC 2 cut(s) 193, 596
PdmI GAANNNNTTC 1 cut(s) 810
PfeI GAWTC 2 cut(s) 1089, 1839
PflMI CCANNNNNTGG 1 cut(s) 740
PleI GAGTC 1 cut(s) 643
PpsI GAGTC 1 cut(s) 643
Ppu21I YACGTR 1 cut(s) 869
PscI ACATGT 1 cut(s) 1149
Psp6I CCWGG 2 cut(s) 1338, 1714
PspGI CCWGG 2 cut(s) 1338, 1714
PspN4I GGNNCC 1 cut(s) 1713
PspPI GGNCC 2 cut(s) 743, 1058
PstI CTGCAG 1 cut(s) 1702
PstNI CAGNNNCTG 1 cut(s) 314
PsuI RGATCY 3 cut(s) 406, 933, 1270
PvuII CAGCTG 1 cut(s) 23
RsaI GTAC 2 cut(s) 1227, 1660
RsaNI GTAC 2 cut(s) 1226, 1659
RseI CAYNNNNRTG 3 cut(s) 987, 1820, 1892
SapI GCTCTTC 2 cut(s) 456, 558
SaqAI TTAA 3 cut(s) 75, 363, 572
Sau3AI GATC 8 cut(s) 334, 406, 717, 933, 1116, 1127, 1270, 1462
Sau96I GGNCC 2 cut(s) 743, 1058
SchI GAGTC 1 cut(s) 644
ScrFI CCNGG 2 cut(s) 1340, 1716
SduI GDGCHC 1 cut(s) 1675
SfaNI GCATC 8 cut(s) 7, 301, 891, 1393, 1428, 1633, 1780, 2034
SfcI CTRYAG 1 cut(s) 1698
SmiMI CAYNNNNRTG 3 cut(s) 987, 1820, 1892
SmlI CTYRAG 2 cut(s) 93, 1179
SmoI CTYRAG 2 cut(s) 93, 1179
SsiI CCGC 6 cut(s) 12, 155, 222, 226, 911, 1096
SspI AATATT 1 cut(s) 1215
SspMI CTAG 4 cut(s) 779, 1001, 1133, 1172
StyD4I CCNGG 2 cut(s) 1338, 1714
TaaI ACNGT 4 cut(s) 644, 1663, 1711, 2118
TaiI ACGT 2 cut(s) 871, 987
TaqI TCGA 1 cut(s) 1126
TatI WGTACW 2 cut(s) 1225, 1658
TauI GCSGC 1 cut(s) 913
TfiI GAWTC 2 cut(s) 1089, 1839
Tru1I TTAA 3 cut(s) 75, 363, 572
Tru9I TTAA 3 cut(s) 75, 363, 572
TscAI CASTG 1 cut(s) 1827
TseFI GTSAC 2 cut(s) 709, 2026
Tsp45I GTSAC 2 cut(s) 709, 2026
TspDTI ATGAA 8 cut(s) 545, 1124, 1599, 1652, 1773, 1964, 1992, 2062
TspGWI ACGGA 2 cut(s) 327, 697
TspRI CASTG 1 cut(s) 1827
Van91I CCANNNNNTGG 1 cut(s) 740
XapI RAATTY 4 cut(s) 213, 392, 917, 1294
XbaI TCTAGA 2 cut(s) 1000, 1171
XceI RCATGY 1 cut(s) 1153
XmnI GAANNNNTTC 1 cut(s) 810
XspI CTAG 4 cut(s) 779, 1001, 1133, 1172
Zsp2I ATGCAT 1 cut(s) 596
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.