protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 107, 210 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 403 |
| AccI | GTMKAC | 2 cut(s) | 264, 407 |
| AccIII | TCCGGA | 1 cut(s) | 130 |
| AcsI | RAATTY | 1 cut(s) | 204 |
| AflIII | ACRYGT | 2 cut(s) | 94, 289 |
| AgsI | TTSAA | 3 cut(s) | 77, 188, 376 |
| Aor13HI | TCCGGA | 1 cut(s) | 130 |
| ApeKI | GCWGC | 1 cut(s) | 341 |
| ApoI | RAATTY | 1 cut(s) | 204 |
| BbvI | GCAGC | 1 cut(s) | 353 |
| BceAI | ACGGC | 1 cut(s) | 167 |
| BfmI | CTRYAG | 1 cut(s) | 365 |
| BisI | GCNGC | 1 cut(s) | 342 |
| BlsI | GCNGC | 1 cut(s) | 343 |
| BmsI | GCATC | 1 cut(s) | 342 |
| BpuEI | CTTGAG | 1 cut(s) | 386 |
| BsaJI | CCNNGG | 1 cut(s) | 334 |
| BsaWI | WCCGGW | 1 cut(s) | 130 |
| Bse3DI | GCAATG | 2 cut(s) | 43, 75 |
| BseAI | TCCGGA | 1 cut(s) | 130 |
| BseDI | CCNNGG | 1 cut(s) | 334 |
| BseMI | GCAATG | 2 cut(s) | 43, 75 |
| BseXI | GCAGC | 1 cut(s) | 353 |
| BsgI | GTGCAG | 1 cut(s) | 360 |
| BsiSI | CCGG | 1 cut(s) | 131 |
| Bsp13I | TCCGGA | 1 cut(s) | 130 |
| Bsp143I | GATC | 1 cut(s) | 40 |
| BspEI | TCCGGA | 1 cut(s) | 130 |
| BsrDI | GCAATG | 2 cut(s) | 43, 75 |
| BssECI | CCNNGG | 1 cut(s) | 334 |
| BssMI | GATC | 1 cut(s) | 40 |
| BssT1I | CCWWGG | 1 cut(s) | 334 |
| Bst4CI | ACNGT | 1 cut(s) | 369 |
| Bst6I | CTCTTC | 1 cut(s) | 412 |
| BstKTI | GATC | 1 cut(s) | 43 |
| BstMBI | GATC | 1 cut(s) | 40 |
| BstNSI | RCATGY | 4 cut(s) | 16, 98, 172, 293 |
| BstSFI | CTRYAG | 1 cut(s) | 365 |
| BstV1I | GCAGC | 1 cut(s) | 353 |
| BtsIMutI | CAGTG | 1 cut(s) | 374 |
| CseI | GACGC | 1 cut(s) | 406 |
| CviAII | CATG | 5 cut(s) | 13, 20, 95, 169, 290 |
| CviJI | RGCY | 3 cut(s) | 54, 80, 344 |
| CviKI_1 | RGCY | 3 cut(s) | 54, 80, 344 |
| DpnI | GATC | 1 cut(s) | 42 |
| DpnII | GATC | 1 cut(s) | 40 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 403 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 403 |
| Eam1104I | CTCTTC | 1 cut(s) | 412 |
| EarI | CTCTTC | 1 cut(s) | 412 |
| Eco130I | CCWWGG | 1 cut(s) | 334 |
| EcoT14I | CCWWGG | 1 cut(s) | 334 |
| EcoT22I | ATGCAT | 1 cut(s) | 14 |
| ErhI | CCWWGG | 1 cut(s) | 334 |
| FaeI | CATG | 5 cut(s) | 16, 23, 98, 172, 293 |
| FatI | CATG | 5 cut(s) | 12, 19, 94, 168, 289 |
| FblI | GTMKAC | 2 cut(s) | 264, 407 |
| Fnu4HI | GCNGC | 1 cut(s) | 342 |
| Fsp4HI | GCNGC | 1 cut(s) | 342 |
| GluI | GCNGC | 1 cut(s) | 342 |
| HapII | CCGG | 1 cut(s) | 131 |
| HgaI | GACGC | 1 cut(s) | 406 |
| Hin1II | CATG | 5 cut(s) | 16, 23, 98, 172, 293 |
| HinfI | GANTC | 1 cut(s) | 379 |
| HpaII | CCGG | 1 cut(s) | 131 |
| Hpy166II | GTNNAC | 2 cut(s) | 265, 408 |
| Hpy188III | TCNNGA | 3 cut(s) | 131, 197, 376 |
| Hpy8I | GTNNAC | 2 cut(s) | 265, 408 |
| Hpy99I | CGWCG | 1 cut(s) | 400 |
| HpyCH4III | ACNGT | 1 cut(s) | 369 |
| HpyCH4IV | ACGT | 3 cut(s) | 261, 330, 445 |
| HpyCH4V | TGCA | 6 cut(s) | 12, 36, 46, 61, 341, 355 |
| HpySE526I | ACGT | 3 cut(s) | 261, 330, 445 |
| Hsp92II | CATG | 5 cut(s) | 16, 23, 98, 172, 293 |
| Kpn2I | TCCGGA | 1 cut(s) | 130 |
| Kzo9I | GATC | 1 cut(s) | 40 |
| LpnPI | CCDG | 2 cut(s) | 144, 282 |
| Lsp1109I | GCAGC | 1 cut(s) | 353 |
| LweI | GCATC | 1 cut(s) | 342 |
| MaeII | ACGT | 3 cut(s) | 261, 330, 445 |
| MaeIII | GTNAC | 2 cut(s) | 119, 145 |
| MalI | GATC | 1 cut(s) | 42 |
| MboI | GATC | 1 cut(s) | 40 |
| MboII | GAAGA | 2 cut(s) | 212, 429 |
| MluCI | AATT | 2 cut(s) | 204, 451 |
| MlyI | GAGTC | 1 cut(s) | 373 |
| MnlI | CCTC | 3 cut(s) | 83, 294, 413 |
| Mph1103I | ATGCAT | 1 cut(s) | 14 |
| MroI | TCCGGA | 1 cut(s) | 130 |
| MseI | TTAA | 2 cut(s) | 441, 454 |
| MspI | CCGG | 1 cut(s) | 131 |
| NdeII | GATC | 1 cut(s) | 40 |
| NlaIII | CATG | 5 cut(s) | 16, 23, 98, 172, 293 |
| NmuCI | GTSAC | 1 cut(s) | 119 |
| NsiI | ATGCAT | 1 cut(s) | 14 |
| NspI | RCATGY | 4 cut(s) | 16, 98, 172, 293 |
| PciI | ACATGT | 2 cut(s) | 94, 289 |
| PkrI | GCNGC | 1 cut(s) | 343 |
| PleI | GAGTC | 1 cut(s) | 373 |
| PpsI | GAGTC | 1 cut(s) | 373 |
| PscI | ACATGT | 2 cut(s) | 94, 289 |
| PsiI | TTATAA | 2 cut(s) | 107, 210 |
| SaqAI | TTAA | 2 cut(s) | 441, 454 |
| SatI | GCNGC | 1 cut(s) | 342 |
| Sau3AI | GATC | 1 cut(s) | 40 |
| SchI | GAGTC | 1 cut(s) | 373 |
| SetI | ASST | 5 cut(s) | 216, 264, 333, 340, 448 |
| SfaNI | GCATC | 1 cut(s) | 342 |
| SfcI | CTRYAG | 1 cut(s) | 365 |
| SmlI | CTYRAG | 1 cut(s) | 401 |
| SmoI | CTYRAG | 1 cut(s) | 401 |
| Sse9I | AATT | 2 cut(s) | 204, 451 |
| SspI | AATATT | 1 cut(s) | 426 |
| StyI | CCWWGG | 1 cut(s) | 334 |
| TaaI | ACNGT | 1 cut(s) | 369 |
| TaiI | ACGT | 3 cut(s) | 264, 333, 448 |
| TaqI | TCGA | 1 cut(s) | 429 |
| TasI | AATT | 2 cut(s) | 204, 451 |
| Tru1I | TTAA | 2 cut(s) | 441, 454 |
| Tru9I | TTAA | 2 cut(s) | 441, 454 |
| TscAI | CASTG | 1 cut(s) | 374 |
| TseFI | GTSAC | 1 cut(s) | 119 |
| TseI | GCWGC | 1 cut(s) | 341 |
| Tsp45I | GTSAC | 1 cut(s) | 119 |
| TspRI | CASTG | 1 cut(s) | 374 |
| XapI | RAATTY | 1 cut(s) | 204 |
| XceI | RCATGY | 4 cut(s) | 16, 98, 172, 293 |
| XmiI | GTMKAC | 2 cut(s) | 264, 407 |
| Zsp2I | ATGCAT | 1 cut(s) | 14 |