protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 322 |
| AccBSI | CCGCTC | 1 cut(s) | 272 |
| AciI | CCGC | 3 cut(s) | 270, 769, 809 |
| AclWI | GGATC | 1 cut(s) | 166 |
| AcsI | RAATTY | 2 cut(s) | 755, 866 |
| AfaI | GTAC | 3 cut(s) | 129, 288, 635 |
| AgsI | TTSAA | 1 cut(s) | 505 |
| AjnI | CCWGG | 1 cut(s) | 4 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 17, 49 |
| AleI | CACNNNNGTG | 1 cut(s) | 621 |
| AluBI | AGCT | 7 cut(s) | 45, 152, 167, 395, 557, 647, 800 |
| AluI | AGCT | 7 cut(s) | 45, 152, 167, 395, 557, 647, 800 |
| Alw26I | GTCTC | 1 cut(s) | 621 |
| AlwI | GGATC | 1 cut(s) | 166 |
| AoxI | GGCC | 1 cut(s) | 766 |
| ApeKI | GCWGC | 3 cut(s) | 149, 179, 392 |
| ApoI | RAATTY | 2 cut(s) | 755, 866 |
| AspS9I | GGNCC | 1 cut(s) | 766 |
| AsuHPI | GGTGA | 2 cut(s) | 89, 383 |
| BanI | GGYRCC | 1 cut(s) | 322 |
| BbvI | GCAGC | 3 cut(s) | 161, 191, 404 |
| BccI | CCATC | 2 cut(s) | 566, 816 |
| BceAI | ACGGC | 2 cut(s) | 310, 603 |
| BciT130I | CCWGG | 1 cut(s) | 6 |
| BcoDI | GTCTC | 1 cut(s) | 621 |
| BfaI | CTAG | 1 cut(s) | 153 |
| BfmI | CTRYAG | 1 cut(s) | 162 |
| BglII | AGATCT | 1 cut(s) | 238 |
| BisI | GCNGC | 5 cut(s) | 150, 180, 393, 769, 809 |
| BlsI | GCNGC | 5 cut(s) | 151, 181, 394, 770, 810 |
| Bme1390I | CCNGG | 1 cut(s) | 6 |
| BmgT120I | GGNCC | 1 cut(s) | 766 |
| BmiI | GGNNCC | 1 cut(s) | 324 |
| BmrFI | CCNGG | 1 cut(s) | 6 |
| BmrI | ACTGGG | 1 cut(s) | 91 |
| BmuI | ACTGGG | 1 cut(s) | 91 |
| BpmI | CTGGAG | 1 cut(s) | 25 |
| Bpu10I | CCTNAGC | 1 cut(s) | 93 |
| BpuEI | CTTGAG | 1 cut(s) | 216 |
| BsaJI | CCNNGG | 3 cut(s) | 622, 669, 791 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 23, 53 |
| Bse1I | ACTGG | 2 cut(s) | 86, 728 |
| Bse3DI | GCAATG | 1 cut(s) | 174 |
| BseBI | CCWGG | 1 cut(s) | 6 |
| BseDI | CCNNGG | 3 cut(s) | 622, 669, 791 |
| BseMI | GCAATG | 1 cut(s) | 174 |
| BseNI | ACTGG | 2 cut(s) | 86, 728 |
| BseXI | GCAGC | 3 cut(s) | 161, 191, 404 |
| BseYI | CCCAGC | 1 cut(s) | 395 |
| BshFI | GGCC | 1 cut(s) | 768 |
| BshNI | GGYRCC | 1 cut(s) | 322 |
| BsmAI | GTCTC | 1 cut(s) | 621 |
| BsmBI | CGTCTC | 1 cut(s) | 621 |
| BsnI | GGCC | 1 cut(s) | 768 |
| Bsp143I | GATC | 3 cut(s) | 158, 238, 651 |
| Bsp19I | CCATGG | 1 cut(s) | 669 |
| BspACI | CCGC | 3 cut(s) | 270, 769, 809 |
| BspANI | GGCC | 1 cut(s) | 768 |
| BspLI | GGNNCC | 1 cut(s) | 324 |
| BspPI | GGATC | 1 cut(s) | 166 |
| BspQI | GCTCTTC | 3 cut(s) | 174, 279, 492 |
| BspT107I | GGYRCC | 1 cut(s) | 322 |
| BsrBI | CCGCTC | 1 cut(s) | 272 |
| BsrDI | GCAATG | 1 cut(s) | 174 |
| BsrI | ACTGG | 2 cut(s) | 86, 728 |
| BssECI | CCNNGG | 3 cut(s) | 622, 669, 791 |
| BssMI | GATC | 3 cut(s) | 158, 238, 651 |
| BssT1I | CCWWGG | 1 cut(s) | 669 |
| Bst2UI | CCWGG | 1 cut(s) | 6 |
| Bst4CI | ACNGT | 3 cut(s) | 20, 623, 638 |
| Bst6I | CTCTTC | 3 cut(s) | 174, 279, 492 |
| BstC8I | GCNNGC | 1 cut(s) | 742 |
| BstDEI | CTNAG | 2 cut(s) | 93, 131 |
| BstDSI | CCRYGG | 3 cut(s) | 622, 669, 791 |
| BstKTI | GATC | 3 cut(s) | 161, 241, 654 |
| BstMAI | GTCTC | 1 cut(s) | 621 |
| BstMBI | GATC | 3 cut(s) | 158, 238, 651 |
| BstNI | CCWGG | 1 cut(s) | 6 |
| BstNSI | RCATGY | 3 cut(s) | 197, 515, 748 |
| BstSCI | CCNGG | 1 cut(s) | 4 |
| BstSFI | CTRYAG | 1 cut(s) | 162 |
| BstV1I | GCAGC | 3 cut(s) | 161, 191, 404 |
| BstX2I | RGATCY | 2 cut(s) | 158, 238 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 623 |
| BstYI | RGATCY | 2 cut(s) | 158, 238 |
| BsuRI | GGCC | 1 cut(s) | 768 |
| BtgI | CCRYGG | 3 cut(s) | 622, 669, 791 |
| BtsIMutI | CAGTG | 1 cut(s) | 643 |
| Cac8I | GCNNGC | 1 cut(s) | 742 |
| Cfr13I | GGNCC | 1 cut(s) | 766 |
| CseI | GACGC | 1 cut(s) | 314 |
| Csp6I | GTAC | 3 cut(s) | 128, 287, 634 |
| CviAII | CATG | 5 cut(s) | 194, 386, 512, 670, 745 |
| CviQI | GTAC | 3 cut(s) | 128, 287, 634 |
| DdeI | CTNAG | 2 cut(s) | 93, 131 |
| DpnI | GATC | 3 cut(s) | 160, 240, 653 |
| DpnII | GATC | 3 cut(s) | 158, 238, 651 |
| Eam1104I | CTCTTC | 3 cut(s) | 174, 279, 492 |
| EarI | CTCTTC | 3 cut(s) | 174, 279, 492 |
| Eco130I | CCWWGG | 1 cut(s) | 669 |
| EcoRII | CCWGG | 1 cut(s) | 4 |
| EcoT14I | CCWWGG | 1 cut(s) | 669 |
| ErhI | CCWWGG | 1 cut(s) | 669 |
| Esp3I | CGTCTC | 1 cut(s) | 621 |
| FaeI | CATG | 5 cut(s) | 197, 389, 515, 673, 748 |
| FatI | CATG | 5 cut(s) | 193, 385, 511, 669, 744 |
| Fnu4HI | GCNGC | 5 cut(s) | 150, 180, 393, 769, 809 |
| Fsp4HI | GCNGC | 5 cut(s) | 150, 180, 393, 769, 809 |
| FspBI | CTAG | 1 cut(s) | 153 |
| GluI | GCNGC | 5 cut(s) | 150, 180, 393, 769, 809 |
| GsaI | CCCAGC | 1 cut(s) | 399 |
| GsuI | CTGGAG | 1 cut(s) | 25 |
| HaeIII | GGCC | 1 cut(s) | 768 |
| HgaI | GACGC | 1 cut(s) | 314 |
| Hin1II | CATG | 5 cut(s) | 197, 389, 515, 673, 748 |
| HindIII | AAGCTT | 2 cut(s) | 555, 798 |
| HinfI | GANTC | 3 cut(s) | 38, 62, 229 |
| HphI | GGTGA | 2 cut(s) | 89, 383 |
| Hpy166II | GTNNAC | 1 cut(s) | 304 |
| Hpy188I | TCNGA | 1 cut(s) | 15 |
| Hpy188III | TCNNGA | 3 cut(s) | 233, 242, 502 |
| Hpy8I | GTNNAC | 1 cut(s) | 304 |
| HpyAV | CCTTC | 4 cut(s) | 182, 286, 392, 856 |
| HpyCH4III | ACNGT | 3 cut(s) | 20, 623, 638 |
| HpyCH4V | TGCA | 7 cut(s) | 179, 199, 267, 412, 517, 677, 744 |
| HpyF3I | CTNAG | 2 cut(s) | 93, 131 |
| Hsp92II | CATG | 5 cut(s) | 197, 389, 515, 673, 748 |
| Kzo9I | GATC | 3 cut(s) | 158, 238, 651 |
| LguI | GCTCTTC | 3 cut(s) | 174, 279, 492 |
| LmnI | GCTCC | 1 cut(s) | 857 |
| LpnPI | CCDG | 9 cut(s) | 18, 55, 67, 159, 227, 326, 381, 698, 741 |
| Lsp1109I | GCAGC | 3 cut(s) | 161, 191, 404 |
| MaeI | CTAG | 1 cut(s) | 153 |
| MaeIII | GTNAC | 2 cut(s) | 77, 784 |
| MalI | GATC | 3 cut(s) | 160, 240, 653 |
| MbiI | CCGCTC | 1 cut(s) | 272 |
| MboI | GATC | 3 cut(s) | 158, 238, 651 |
| MboII | GAAGA | 7 cut(s) | 161, 248, 266, 458, 461, 479, 653 |
| MfeI | CAATTG | 2 cut(s) | 475, 761 |
| MflI | RGATCY | 2 cut(s) | 158, 238 |
| MluCI | AATT | 5 cut(s) | 117, 475, 755, 761, 866 |
| MlyI | GAGTC | 2 cut(s) | 32, 223 |
| MmeI | TCCRAC | 2 cut(s) | 48, 495 |
| MnlI | CCTC | 5 cut(s) | 149, 177, 310, 435, 730 |
| MseI | TTAA | 4 cut(s) | 663, 752, 803, 880 |
| MslI | CAYNNNNRTG | 1 cut(s) | 621 |
| MspA1I | CMGCKG | 1 cut(s) | 395 |
| MspR9I | CCNGG | 1 cut(s) | 6 |
| MunI | CAATTG | 2 cut(s) | 475, 761 |
| MvaI | CCWGG | 1 cut(s) | 6 |
| NcoI | CCATGG | 1 cut(s) | 669 |
| NdeII | GATC | 3 cut(s) | 158, 238, 651 |
| NlaIII | CATG | 5 cut(s) | 197, 389, 515, 673, 748 |
| NlaIV | GGNNCC | 1 cut(s) | 324 |
| NmuCI | GTSAC | 1 cut(s) | 77 |
| NspI | RCATGY | 3 cut(s) | 197, 515, 748 |
| OliI | CACNNNNGTG | 1 cut(s) | 621 |
| PciSI | GCTCTTC | 3 cut(s) | 174, 279, 492 |
| PfeI | GAWTC | 1 cut(s) | 62 |
| PkrI | GCNGC | 5 cut(s) | 151, 181, 394, 770, 810 |
| PleI | GAGTC | 2 cut(s) | 32, 223 |
| PpsI | GAGTC | 2 cut(s) | 32, 223 |
| Psp6I | CCWGG | 1 cut(s) | 4 |
| PspFI | CCCAGC | 1 cut(s) | 395 |
| PspGI | CCWGG | 1 cut(s) | 4 |
| PspN4I | GGNNCC | 1 cut(s) | 324 |
| PspPI | GGNCC | 1 cut(s) | 766 |
| PsuI | RGATCY | 2 cut(s) | 158, 238 |
| PvuII | CAGCTG | 1 cut(s) | 395 |
| RsaI | GTAC | 3 cut(s) | 129, 288, 635 |
| RsaNI | GTAC | 3 cut(s) | 128, 287, 634 |
| RseI | CAYNNNNRTG | 1 cut(s) | 621 |
| SapI | GCTCTTC | 3 cut(s) | 174, 279, 492 |
| SaqAI | TTAA | 4 cut(s) | 663, 752, 803, 880 |
| SatI | GCNGC | 5 cut(s) | 150, 180, 393, 769, 809 |
| Sau3AI | GATC | 3 cut(s) | 158, 238, 651 |
| Sau96I | GGNCC | 1 cut(s) | 766 |
| SchI | GAGTC | 2 cut(s) | 32, 223 |
| ScrFI | CCNGG | 1 cut(s) | 6 |
| SfcI | CTRYAG | 1 cut(s) | 162 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 621 |
| SmlI | CTYRAG | 1 cut(s) | 231 |
| SmoI | CTYRAG | 1 cut(s) | 231 |
| Sse9I | AATT | 5 cut(s) | 117, 475, 755, 761, 866 |
| SsiI | CCGC | 3 cut(s) | 270, 769, 809 |
| SspMI | CTAG | 1 cut(s) | 153 |
| StyD4I | CCNGG | 1 cut(s) | 4 |
| StyI | CCWWGG | 1 cut(s) | 669 |
| TaaI | ACNGT | 3 cut(s) | 20, 623, 638 |
| TaqI | TCGA | 2 cut(s) | 36, 654 |
| TasI | AATT | 5 cut(s) | 117, 475, 755, 761, 866 |
| TatI | WGTACW | 3 cut(s) | 127, 286, 633 |
| TauI | GCSGC | 2 cut(s) | 771, 811 |
| TfiI | GAWTC | 1 cut(s) | 62 |
| Tru1I | TTAA | 4 cut(s) | 663, 752, 803, 880 |
| Tru9I | TTAA | 4 cut(s) | 663, 752, 803, 880 |
| TscAI | CASTG | 1 cut(s) | 643 |
| TseFI | GTSAC | 1 cut(s) | 77 |
| TseI | GCWGC | 3 cut(s) | 149, 179, 392 |
| Tsp45I | GTSAC | 1 cut(s) | 77 |
| TspDTI | ATGAA | 2 cut(s) | 63, 374 |
| TspGWI | ACGGA | 1 cut(s) | 772 |
| TspRI | CASTG | 1 cut(s) | 643 |
| XapI | RAATTY | 2 cut(s) | 755, 866 |
| XceI | RCATGY | 3 cut(s) | 197, 515, 748 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 692, 819 |
| XspI | CTAG | 1 cut(s) | 153 |