Domain of unknown function
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF4219 | PF13961 | 16 - 41 | 2.7e-07 | Domain of unknown function (DUF4219) |
| Retrotran_gag_2 | PF14223 | 29 - 110 | 4.8e-08 | gag-polypeptide of LTR copia-type |
| Ank_2 | PF12796 | 166 - 251 | 1.5e-09 | Ankyrin repeats (3 copies) |
| Ank_5 | PF13857 | 181 - 224 | 1.5e-06 | Ankyrin repeats (many copies) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1271 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 146 |
| AccI | GTMKAC | 1 cut(s) | 1090 |
| AciI | CCGC | 4 cut(s) | 79, 225, 366, 1225 |
| AclI | AACGTT | 1 cut(s) | 117 |
| AclWI | GGATC | 6 cut(s) | 277, 536, 1029, 1042, 1085, 1103 |
| AcoI | YGGCCR | 2 cut(s) | 99, 482 |
| AcsI | RAATTY | 1 cut(s) | 897 |
| AcuI | CTGAAG | 3 cut(s) | 329, 735, 1024 |
| AfaI | GTAC | 4 cut(s) | 10, 364, 753, 1293 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 146, 585, 783 |
| AgsI | TTSAA | 4 cut(s) | 374, 439, 506, 737 |
| AjnI | CCWGG | 2 cut(s) | 285, 878 |
| AleI | CACNNNNGTG | 1 cut(s) | 1215 |
| AluBI | AGCT | 4 cut(s) | 200, 563, 863, 1163 |
| AluI | AGCT | 4 cut(s) | 200, 563, 863, 1163 |
| Alw26I | GTCTC | 2 cut(s) | 543, 869 |
| AlwI | GGATC | 6 cut(s) | 277, 536, 1029, 1042, 1085, 1103 |
| AoxI | GGCC | 4 cut(s) | 99, 482, 881, 889 |
| ApeKI | GCWGC | 2 cut(s) | 575, 1305 |
| ApoI | RAATTY | 1 cut(s) | 897 |
| AseI | ATTAAT | 2 cut(s) | 594, 768 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 327 |
| AspS9I | GGNCC | 1 cut(s) | 890 |
| AsuHPI | GGTGA | 4 cut(s) | 161, 428, 560, 748 |
| BaeGI | GKGCMC | 1 cut(s) | 1276 |
| BalI | TGGCCA | 1 cut(s) | 484 |
| BamHI | GGATCC | 1 cut(s) | 1034 |
| BanI | GGYRCC | 1 cut(s) | 1271 |
| BauI | CACGAG | 1 cut(s) | 220 |
| BbsI | GAAGAC | 1 cut(s) | 396 |
| BbvI | GCAGC | 2 cut(s) | 587, 1292 |
| BccI | CCATC | 3 cut(s) | 813, 881, 1125 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 184, 218 |
| BciT130I | CCWGG | 2 cut(s) | 287, 880 |
| BclI | TGATCA | 1 cut(s) | 1156 |
| BcoDI | GTCTC | 2 cut(s) | 543, 869 |
| BfaI | CTAG | 2 cut(s) | 572, 723 |
| BglII | AGATCT | 1 cut(s) | 634 |
| BisI | GCNGC | 2 cut(s) | 576, 1306 |
| BlsI | GCNGC | 2 cut(s) | 577, 1307 |
| BmcAI | AGTACT | 1 cut(s) | 10 |
| Bme1390I | CCNGG | 2 cut(s) | 287, 880 |
| BmgT120I | GGNCC | 1 cut(s) | 890 |
| BmiI | GGNNCC | 2 cut(s) | 1036, 1273 |
| BmrFI | CCNGG | 2 cut(s) | 287, 880 |
| BmsI | GCATC | 1 cut(s) | 1183 |
| BpiI | GAAGAC | 1 cut(s) | 396 |
| BpmI | CTGGAG | 1 cut(s) | 91 |
| BsaI | GGTCTC | 2 cut(s) | 543, 869 |
| BsaJI | CCNNGG | 1 cut(s) | 579 |
| BsaWI | WCCGGW | 2 cut(s) | 160, 1256 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 146, 585, 783 |
| Bse1I | ACTGG | 3 cut(s) | 74, 791, 831 |
| Bse3DI | GCAATG | 1 cut(s) | 682 |
| BseBI | CCWGG | 2 cut(s) | 287, 880 |
| BseDI | CCNNGG | 1 cut(s) | 579 |
| BseGI | GGATG | 1 cut(s) | 1229 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 146, 585, 783 |
| BseMI | GCAATG | 1 cut(s) | 682 |
| BseMII | CTCAG | 1 cut(s) | 1254 |
| BseNI | ACTGG | 3 cut(s) | 74, 791, 831 |
| BseSI | GKGCMC | 1 cut(s) | 1276 |
| BseXI | GCAGC | 2 cut(s) | 587, 1292 |
| BsgI | GTGCAG | 1 cut(s) | 1291 |
| BshFI | GGCC | 4 cut(s) | 101, 484, 883, 891 |
| BshNI | GGYRCC | 1 cut(s) | 1271 |
| BsiSI | CCGG | 2 cut(s) | 161, 1257 |
| BslFI | GGGAC | 1 cut(s) | 959 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 146, 585, 783 |
| BsmAI | GTCTC | 2 cut(s) | 543, 869 |
| BsmFI | GGGAC | 1 cut(s) | 959 |
| BsmI | GAATGC | 2 cut(s) | 196, 1027 |
| BsnI | GGCC | 4 cut(s) | 101, 484, 883, 891 |
| Bso31I | GGTCTC | 2 cut(s) | 543, 869 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1276 |
| Bsp143I | GATC | 7 cut(s) | 282, 541, 634, 1034, 1077, 1108, 1156 |
| BspACI | CCGC | 4 cut(s) | 79, 225, 366, 1225 |
| BspANI | GGCC | 4 cut(s) | 101, 484, 883, 891 |
| BspCNI | CTCAG | 1 cut(s) | 1253 |
| BspHI | TCATGA | 2 cut(s) | 1120, 1263 |
| BspLI | GGNNCC | 2 cut(s) | 1036, 1273 |
| BspPI | GGATC | 6 cut(s) | 277, 536, 1029, 1042, 1085, 1103 |
| BspQI | GCTCTTC | 1 cut(s) | 570 |
| BspT107I | GGYRCC | 1 cut(s) | 1271 |
| BspTNI | GGTCTC | 2 cut(s) | 543, 869 |
| BsrDI | GCAATG | 1 cut(s) | 682 |
| BsrI | ACTGG | 3 cut(s) | 74, 791, 831 |
| BssECI | CCNNGG | 1 cut(s) | 579 |
| BssMI | GATC | 7 cut(s) | 282, 541, 634, 1034, 1077, 1108, 1156 |
| BssNAI | GTATAC | 1 cut(s) | 1091 |
| BssSI | CACGAG | 1 cut(s) | 220 |
| BssT1I | CCWWGG | 1 cut(s) | 579 |
| Bst1107I | GTATAC | 1 cut(s) | 1091 |
| Bst2BI | CACGAG | 1 cut(s) | 220 |
| Bst2UI | CCWGG | 2 cut(s) | 287, 880 |
| Bst4CI | ACNGT | 4 cut(s) | 615, 653, 698, 1088 |
| Bst6I | CTCTTC | 2 cut(s) | 336, 570 |
| BstC8I | GCNNGC | 1 cut(s) | 1165 |
| BstDEI | CTNAG | 1 cut(s) | 1240 |
| BstF5I | GGATG | 1 cut(s) | 1229 |
| BstKTI | GATC | 7 cut(s) | 285, 544, 637, 1037, 1080, 1111, 1159 |
| BstMAI | GTCTC | 2 cut(s) | 543, 869 |
| BstMBI | GATC | 7 cut(s) | 282, 541, 634, 1034, 1077, 1108, 1156 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 272, 533, 719 |
| BstNI | CCWGG | 2 cut(s) | 287, 880 |
| BstNSI | RCATGY | 1 cut(s) | 209 |
| BstSCI | CCNGG | 2 cut(s) | 285, 878 |
| BstSLI | GKGCMC | 1 cut(s) | 1276 |
| BstV1I | GCAGC | 2 cut(s) | 587, 1292 |
| BstV2I | GAAGAC | 1 cut(s) | 396 |
| BstX2I | RGATCY | 5 cut(s) | 282, 541, 634, 1034, 1077 |
| BstYI | RGATCY | 5 cut(s) | 282, 541, 634, 1034, 1077 |
| BstZ17I | GTATAC | 1 cut(s) | 1091 |
| BsuRI | GGCC | 4 cut(s) | 101, 484, 883, 891 |
| BtsCI | GGATG | 1 cut(s) | 1229 |
| BtsI | GCAGTG | 1 cut(s) | 261 |
| BtsIMutI | CAGTG | 4 cut(s) | 67, 261, 478, 1048 |
| Cac8I | GCNNGC | 1 cut(s) | 1165 |
| CciI | TCATGA | 2 cut(s) | 1120, 1263 |
| Cfr13I | GGNCC | 1 cut(s) | 890 |
| Csp6I | GTAC | 4 cut(s) | 9, 363, 752, 1292 |
| CviAII | CATG | 6 cut(s) | 146, 206, 276, 464, 1121, 1264 |
| CviQI | GTAC | 4 cut(s) | 9, 363, 752, 1292 |
| DdeI | CTNAG | 1 cut(s) | 1240 |
| DpnI | GATC | 7 cut(s) | 284, 543, 636, 1036, 1079, 1110, 1158 |
| DpnII | GATC | 7 cut(s) | 282, 541, 634, 1034, 1077, 1108, 1156 |
| EaeI | YGGCCR | 2 cut(s) | 99, 482 |
| Eam1104I | CTCTTC | 2 cut(s) | 336, 570 |
| EarI | CTCTTC | 2 cut(s) | 336, 570 |
| EciI | GGCGGA | 1 cut(s) | 1240 |
| Eco130I | CCWWGG | 1 cut(s) | 579 |
| Eco147I | AGGCCT | 1 cut(s) | 883 |
| Eco31I | GGTCTC | 2 cut(s) | 543, 869 |
| Eco32I | GATATC | 2 cut(s) | 517, 1128 |
| Eco57I | CTGAAG | 3 cut(s) | 329, 735, 1024 |
| EcoRII | CCWGG | 2 cut(s) | 285, 878 |
| EcoRV | GATATC | 2 cut(s) | 517, 1128 |
| EcoT14I | CCWWGG | 1 cut(s) | 579 |
| ErhI | CCWWGG | 1 cut(s) | 579 |
| FaeI | CATG | 6 cut(s) | 149, 209, 279, 467, 1124, 1267 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 77, 109, 953, 985 |
| FaqI | GGGAC | 1 cut(s) | 959 |
| FatI | CATG | 6 cut(s) | 145, 205, 275, 463, 1120, 1263 |
| FauI | CCCGC | 2 cut(s) | 72, 218 |
| FauNDI | CATATG | 1 cut(s) | 921 |
| FbaI | TGATCA | 1 cut(s) | 1156 |
| FblI | GTMKAC | 1 cut(s) | 1090 |
| Fnu4HI | GCNGC | 2 cut(s) | 576, 1306 |
| FokI | GGATG | 1 cut(s) | 1216 |
| Fsp4HI | GCNGC | 2 cut(s) | 576, 1306 |
| FspBI | CTAG | 2 cut(s) | 572, 723 |
| GluI | GCNGC | 2 cut(s) | 576, 1306 |
| GsuI | CTGGAG | 1 cut(s) | 91 |
| HaeIII | GGCC | 4 cut(s) | 101, 484, 883, 891 |
| HapII | CCGG | 2 cut(s) | 161, 1257 |
| Hin1II | CATG | 6 cut(s) | 149, 209, 279, 467, 1124, 1267 |
| HindIII | AAGCTT | 1 cut(s) | 198 |
| HinfI | GANTC | 2 cut(s) | 41, 152 |
| HpaII | CCGG | 2 cut(s) | 161, 1257 |
| HphI | GGTGA | 4 cut(s) | 161, 428, 560, 748 |
| Hpy166II | GTNNAC | 2 cut(s) | 1091, 1249 |
| Hpy188I | TCNGA | 4 cut(s) | 157, 246, 1289, 1322 |
| Hpy188III | TCNNGA | 6 cut(s) | 332, 503, 638, 1032, 1121, 1264 |
| Hpy8I | GTNNAC | 2 cut(s) | 1091, 1249 |
| Hpy99I | CGWCG | 2 cut(s) | 657, 995 |
| HpyAV | CCTTC | 7 cut(s) | 98, 304, 341, 407, 578, 1041, 1048 |
| HpyCH4III | ACNGT | 4 cut(s) | 615, 653, 698, 1088 |
| HpyCH4IV | ACGT | 3 cut(s) | 117, 958, 1060 |
| HpyCH4V | TGCA | 8 cut(s) | 205, 275, 300, 941, 1027, 1202, 1220, 1308 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 272, 533, 719 |
| HpyF3I | CTNAG | 1 cut(s) | 1240 |
| HpySE526I | ACGT | 3 cut(s) | 117, 958, 1060 |
| Hsp92II | CATG | 6 cut(s) | 149, 209, 279, 467, 1124, 1267 |
| Ksp22I | TGATCA | 1 cut(s) | 1156 |
| Kzo9I | GATC | 7 cut(s) | 282, 541, 634, 1034, 1077, 1108, 1156 |
| LguI | GCTCTTC | 1 cut(s) | 570 |
| Lsp1109I | GCAGC | 2 cut(s) | 587, 1292 |
| LweI | GCATC | 1 cut(s) | 1183 |
| MaeI | CTAG | 2 cut(s) | 572, 723 |
| MaeII | ACGT | 3 cut(s) | 117, 958, 1060 |
| MaeIII | GTNAC | 4 cut(s) | 22, 609, 659, 847 |
| MalI | GATC | 7 cut(s) | 284, 543, 636, 1036, 1079, 1110, 1158 |
| MboI | GATC | 7 cut(s) | 282, 541, 634, 1034, 1077, 1108, 1156 |
| MboII | GAAGA | 9 cut(s) | 199, 353, 401, 518, 557, 644, 1163, 1199, 1202 |
| MfeI | CAATTG | 1 cut(s) | 781 |
| MflI | RGATCY | 5 cut(s) | 282, 541, 634, 1034, 1077 |
| MhlI | GDGCHC | 1 cut(s) | 1276 |
| MlsI | TGGCCA | 1 cut(s) | 484 |
| MluCI | AATT | 6 cut(s) | 255, 369, 509, 732, 781, 897 |
| MluNI | TGGCCA | 1 cut(s) | 484 |
| MmeI | TCCRAC | 2 cut(s) | 150, 1196 |
| MnlI | CCTC | 8 cut(s) | 37, 166, 337, 481, 783, 793, 903, 1260 |
| Mox20I | TGGCCA | 1 cut(s) | 484 |
| MroXI | GAANNNNTTC | 1 cut(s) | 327 |
| MscI | TGGCCA | 1 cut(s) | 484 |
| MseI | TTAA | 6 cut(s) | 48, 84, 594, 768, 915, 1056 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1215 |
| Msp20I | TGGCCA | 1 cut(s) | 484 |
| MspI | CCGG | 2 cut(s) | 161, 1257 |
| MspR9I | CCNGG | 2 cut(s) | 287, 880 |
| MunI | CAATTG | 1 cut(s) | 781 |
| Mva1269I | GAATGC | 2 cut(s) | 196, 1027 |
| MvaI | CCWGG | 2 cut(s) | 287, 880 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 272, 533, 719 |
| NdeI | CATATG | 1 cut(s) | 921 |
| NdeII | GATC | 7 cut(s) | 282, 541, 634, 1034, 1077, 1108, 1156 |
| NlaIII | CATG | 6 cut(s) | 149, 209, 279, 467, 1124, 1267 |
| NlaIV | GGNNCC | 2 cut(s) | 1036, 1273 |
| NmuCI | GTSAC | 1 cut(s) | 847 |
| NspI | RCATGY | 1 cut(s) | 209 |
| OliI | CACNNNNGTG | 1 cut(s) | 1215 |
| PagI | TCATGA | 2 cut(s) | 1120, 1263 |
| PceI | AGGCCT | 1 cut(s) | 883 |
| PciSI | GCTCTTC | 1 cut(s) | 570 |
| PctI | GAATGC | 2 cut(s) | 196, 1027 |
| PdmI | GAANNNNTTC | 1 cut(s) | 327 |
| PfeI | GAWTC | 2 cut(s) | 41, 152 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 146 |
| PfoI | TCCNGGA | 1 cut(s) | 285 |
| PkrI | GCNGC | 2 cut(s) | 577, 1307 |
| PshBI | ATTAAT | 2 cut(s) | 594, 768 |
| Psp1406I | AACGTT | 1 cut(s) | 117 |
| Psp6I | CCWGG | 2 cut(s) | 285, 878 |
| PspGI | CCWGG | 2 cut(s) | 285, 878 |
| PspN4I | GGNNCC | 2 cut(s) | 1036, 1273 |
| PspPI | GGNCC | 1 cut(s) | 890 |
| PsuI | RGATCY | 5 cut(s) | 282, 541, 634, 1034, 1077 |
| RsaI | GTAC | 4 cut(s) | 10, 364, 753, 1293 |
| RsaNI | GTAC | 4 cut(s) | 9, 363, 752, 1292 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1215 |
| SapI | GCTCTTC | 1 cut(s) | 570 |
| SaqAI | TTAA | 6 cut(s) | 48, 84, 594, 768, 915, 1056 |
| SatI | GCNGC | 2 cut(s) | 576, 1306 |
| Sau3AI | GATC | 7 cut(s) | 282, 541, 634, 1034, 1077, 1108, 1156 |
| Sau96I | GGNCC | 1 cut(s) | 890 |
| ScaI | AGTACT | 1 cut(s) | 10 |
| ScrFI | CCNGG | 2 cut(s) | 287, 880 |
| SduI | GDGCHC | 1 cut(s) | 1276 |
| SfaNI | GCATC | 1 cut(s) | 1183 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1215 |
| Sse9I | AATT | 6 cut(s) | 255, 369, 509, 732, 781, 897 |
| SseBI | AGGCCT | 1 cut(s) | 883 |
| SsiI | CCGC | 4 cut(s) | 79, 225, 366, 1225 |
| SspI | AATATT | 1 cut(s) | 598 |
| SspMI | CTAG | 2 cut(s) | 572, 723 |
| StuI | AGGCCT | 1 cut(s) | 883 |
| StyD4I | CCNGG | 2 cut(s) | 285, 878 |
| StyI | CCWWGG | 1 cut(s) | 579 |
| TaaI | ACNGT | 4 cut(s) | 615, 653, 698, 1088 |
| TaiI | ACGT | 3 cut(s) | 120, 961, 1063 |
| TaqI | TCGA | 1 cut(s) | 798 |
| TasI | AATT | 6 cut(s) | 255, 369, 509, 732, 781, 897 |
| TatI | WGTACW | 3 cut(s) | 8, 751, 1291 |
| TfiI | GAWTC | 2 cut(s) | 41, 152 |
| Tru1I | TTAA | 6 cut(s) | 48, 84, 594, 768, 915, 1056 |
| Tru9I | TTAA | 6 cut(s) | 48, 84, 594, 768, 915, 1056 |
| TscAI | CASTG | 4 cut(s) | 74, 268, 478, 1048 |
| TseFI | GTSAC | 1 cut(s) | 847 |
| TseI | GCWGC | 2 cut(s) | 575, 1305 |
| Tsp45I | GTSAC | 1 cut(s) | 847 |
| TspDTI | ATGAA | 5 cut(s) | 200, 449, 462, 873, 938 |
| TspGWI | ACGGA | 2 cut(s) | 1000, 1008 |
| TspRI | CASTG | 4 cut(s) | 74, 268, 478, 1048 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 146 |
| VspI | ATTAAT | 2 cut(s) | 594, 768 |
| XapI | RAATTY | 1 cut(s) | 897 |
| XceI | RCATGY | 1 cut(s) | 209 |
| XmiI | GTMKAC | 1 cut(s) | 1090 |
| XmnI | GAANNNNTTC | 1 cut(s) | 327 |
| XspI | CTAG | 2 cut(s) | 572, 723 |
| ZrmI | AGTACT | 1 cut(s) | 10 |