protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 493, 510 |
| AclWI | GGATC | 2 cut(s) | 175, 188 |
| AcoI | YGGCCR | 1 cut(s) | 438 |
| AcyI | GRCGYC | 1 cut(s) | 385 |
| AfaI | GTAC | 2 cut(s) | 133, 251 |
| AfeI | AGCGCT | 1 cut(s) | 516 |
| AgsI | TTSAA | 1 cut(s) | 206 |
| AjnI | CCWGG | 1 cut(s) | 13 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 165, 197 |
| AluBI | AGCT | 2 cut(s) | 137, 191 |
| AluI | AGCT | 2 cut(s) | 137, 191 |
| Alw26I | GTCTC | 2 cut(s) | 189, 308 |
| AlwI | GGATC | 2 cut(s) | 175, 188 |
| Aor51HI | AGCGCT | 1 cut(s) | 516 |
| AoxI | GGCC | 2 cut(s) | 350, 438 |
| ApeKI | GCWGC | 1 cut(s) | 466 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 440, 472 |
| AseI | ATTAAT | 2 cut(s) | 369, 539 |
| AspLEI | GCGC | 2 cut(s) | 359, 517 |
| AspS9I | GGNCC | 1 cut(s) | 351 |
| AsuC2I | CCSGG | 1 cut(s) | 354 |
| AsuHPI | GGTGA | 2 cut(s) | 26, 79 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 135, 168 |
| BalI | TGGCCA | 1 cut(s) | 440 |
| BamHI | GGATCC | 1 cut(s) | 180 |
| BbvI | GCAGC | 1 cut(s) | 478 |
| BciT130I | CCWGG | 1 cut(s) | 15 |
| BciVI | GTATCC | 1 cut(s) | 438 |
| BcnI | CCSGG | 1 cut(s) | 354 |
| BcoDI | GTCTC | 2 cut(s) | 189, 308 |
| BfaI | CTAG | 1 cut(s) | 192 |
| BfoI | RGCGCY | 2 cut(s) | 360, 518 |
| BfuI | GTATCC | 1 cut(s) | 438 |
| BisI | GCNGC | 1 cut(s) | 467 |
| BlsI | GCNGC | 1 cut(s) | 468 |
| Bme1390I | CCNGG | 2 cut(s) | 15, 354 |
| BmgT120I | GGNCC | 1 cut(s) | 351 |
| BmiI | GGNNCC | 1 cut(s) | 182 |
| BmrFI | CCNGG | 2 cut(s) | 15, 354 |
| BmsI | GCATC | 3 cut(s) | 11, 167, 498 |
| BoxI | GACNNNNGTC | 1 cut(s) | 126 |
| BpuMI | CCSGG | 1 cut(s) | 354 |
| BsaHI | GRCGYC | 1 cut(s) | 385 |
| BsaJI | CCNNGG | 1 cut(s) | 441 |
| Bse1I | ACTGG | 1 cut(s) | 257 |
| BseBI | CCWGG | 1 cut(s) | 15 |
| BseDI | CCNNGG | 1 cut(s) | 441 |
| BseGI | GGATG | 2 cut(s) | 26, 489 |
| BseMII | CTCAG | 1 cut(s) | 326 |
| BseNI | ACTGG | 1 cut(s) | 257 |
| BseXI | GCAGC | 1 cut(s) | 478 |
| BshFI | GGCC | 2 cut(s) | 352, 440 |
| BsiSI | CCGG | 1 cut(s) | 354 |
| BslFI | GGGAC | 1 cut(s) | 372 |
| BsmAI | GTCTC | 2 cut(s) | 189, 308 |
| BsmFI | GGGAC | 1 cut(s) | 372 |
| BsnI | GGCC | 2 cut(s) | 352, 440 |
| Bsp143I | GATC | 2 cut(s) | 28, 180 |
| Bsp19I | CCATGG | 1 cut(s) | 441 |
| BspACI | CCGC | 2 cut(s) | 493, 510 |
| BspANI | GGCC | 2 cut(s) | 352, 440 |
| BspCNI | CTCAG | 1 cut(s) | 327 |
| BspLI | GGNNCC | 1 cut(s) | 182 |
| BspPI | GGATC | 2 cut(s) | 175, 188 |
| BsrI | ACTGG | 1 cut(s) | 257 |
| BssECI | CCNNGG | 1 cut(s) | 441 |
| BssMI | GATC | 2 cut(s) | 28, 180 |
| BssNI | GRCGYC | 1 cut(s) | 385 |
| BssT1I | CCWWGG | 1 cut(s) | 441 |
| Bst2UI | CCWGG | 1 cut(s) | 15 |
| Bst4CI | ACNGT | 5 cut(s) | 10, 148, 177, 426, 435 |
| BstACI | GRCGYC | 1 cut(s) | 385 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 164, 472 |
| BstC8I | GCNNGC | 1 cut(s) | 487 |
| BstDEI | CTNAG | 1 cut(s) | 335 |
| BstDSI | CCRYGG | 1 cut(s) | 441 |
| BstF5I | GGATG | 2 cut(s) | 26, 489 |
| BstH2I | RGCGCY | 2 cut(s) | 360, 518 |
| BstHHI | GCGC | 2 cut(s) | 359, 517 |
| BstKTI | GATC | 2 cut(s) | 31, 183 |
| BstMAI | GTCTC | 2 cut(s) | 189, 308 |
| BstMBI | GATC | 2 cut(s) | 28, 180 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 164, 472 |
| BstNI | CCWGG | 1 cut(s) | 15 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 126 |
| BstSCI | CCNGG | 2 cut(s) | 13, 352 |
| BstV1I | GCAGC | 1 cut(s) | 478 |
| BstX2I | RGATCY | 1 cut(s) | 180 |
| BstYI | RGATCY | 1 cut(s) | 180 |
| BsuI | GTATCC | 1 cut(s) | 438 |
| BsuRI | GGCC | 2 cut(s) | 352, 440 |
| BtgI | CCRYGG | 1 cut(s) | 441 |
| BtsCI | GGATG | 2 cut(s) | 26, 489 |
| BtsI | GCAGTG | 1 cut(s) | 502 |
| BtsIMutI | CAGTG | 2 cut(s) | 182, 502 |
| Cac8I | GCNNGC | 1 cut(s) | 487 |
| CfoI | GCGC | 2 cut(s) | 359, 517 |
| Cfr13I | GGNCC | 1 cut(s) | 351 |
| CseI | GACGC | 1 cut(s) | 374 |
| Csp6I | GTAC | 2 cut(s) | 132, 250 |
| CviAII | CATG | 4 cut(s) | 199, 323, 408, 442 |
| CviQI | GTAC | 2 cut(s) | 132, 250 |
| DdeI | CTNAG | 1 cut(s) | 335 |
| DpnI | GATC | 2 cut(s) | 30, 182 |
| DpnII | GATC | 2 cut(s) | 28, 180 |
| EaeI | YGGCCR | 1 cut(s) | 438 |
| Eco130I | CCWWGG | 1 cut(s) | 441 |
| Eco47III | AGCGCT | 1 cut(s) | 516 |
| EcoRII | CCWGG | 1 cut(s) | 13 |
| EcoT14I | CCWWGG | 1 cut(s) | 441 |
| ErhI | CCWWGG | 1 cut(s) | 441 |
| FaeI | CATG | 4 cut(s) | 202, 326, 411, 445 |
| FaiI | YATR | 8 cut(s) | 47, 200, 221, 324, 374, 409, 443, 473 |
| FaqI | GGGAC | 1 cut(s) | 372 |
| FatI | CATG | 4 cut(s) | 198, 322, 407, 441 |
| Fnu4HI | GCNGC | 1 cut(s) | 467 |
| FokI | GGATG | 2 cut(s) | 33, 476 |
| Fsp4HI | GCNGC | 1 cut(s) | 467 |
| FspBI | CTAG | 1 cut(s) | 192 |
| GlaI | GCGC | 2 cut(s) | 358, 516 |
| GluI | GCNGC | 1 cut(s) | 467 |
| HaeII | RGCGCY | 2 cut(s) | 360, 518 |
| HaeIII | GGCC | 2 cut(s) | 352, 440 |
| HapII | CCGG | 1 cut(s) | 354 |
| HgaI | GACGC | 1 cut(s) | 374 |
| HhaI | GCGC | 2 cut(s) | 359, 517 |
| Hin1I | GRCGYC | 1 cut(s) | 385 |
| Hin1II | CATG | 4 cut(s) | 202, 326, 411, 445 |
| Hin6I | GCGC | 2 cut(s) | 357, 515 |
| HinP1I | GCGC | 2 cut(s) | 357, 515 |
| HpaII | CCGG | 1 cut(s) | 354 |
| HphI | GGTGA | 2 cut(s) | 26, 79 |
| Hpy99I | CGWCG | 2 cut(s) | 88, 132 |
| HpyAV | CCTTC | 1 cut(s) | 342 |
| HpyCH4III | ACNGT | 5 cut(s) | 10, 148, 177, 426, 435 |
| HpyCH4IV | ACGT | 1 cut(s) | 298 |
| HpyCH4V | TGCA | 4 cut(s) | 158, 167, 407, 500 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 164, 472 |
| HpyF3I | CTNAG | 1 cut(s) | 335 |
| HpySE526I | ACGT | 1 cut(s) | 298 |
| Hsp92I | GRCGYC | 1 cut(s) | 385 |
| Hsp92II | CATG | 4 cut(s) | 202, 326, 411, 445 |
| HspAI | GCGC | 2 cut(s) | 357, 515 |
| Kzo9I | GATC | 2 cut(s) | 28, 180 |
| LmnI | GCTCC | 1 cut(s) | 512 |
| LpnPI | CCDG | 5 cut(s) | 27, 228, 270, 367, 471 |
| Lsp1109I | GCAGC | 1 cut(s) | 478 |
| LweI | GCATC | 3 cut(s) | 11, 167, 498 |
| MaeI | CTAG | 1 cut(s) | 192 |
| MaeII | ACGT | 1 cut(s) | 298 |
| MaeIII | GTNAC | 1 cut(s) | 338 |
| MalI | GATC | 2 cut(s) | 30, 182 |
| MboI | GATC | 2 cut(s) | 28, 180 |
| MboII | GAAGA | 2 cut(s) | 23, 113 |
| MflI | RGATCY | 1 cut(s) | 180 |
| MlsI | TGGCCA | 1 cut(s) | 440 |
| MluCI | AATT | 1 cut(s) | 536 |
| MluNI | TGGCCA | 1 cut(s) | 440 |
| MnlI | CCTC | 4 cut(s) | 58, 258, 319, 323 |
| Mox20I | TGGCCA | 1 cut(s) | 440 |
| MscI | TGGCCA | 1 cut(s) | 440 |
| MseI | TTAA | 3 cut(s) | 225, 369, 539 |
| Msp20I | TGGCCA | 1 cut(s) | 440 |
| MspI | CCGG | 1 cut(s) | 354 |
| MspR9I | CCNGG | 2 cut(s) | 15, 354 |
| MvaI | CCWGG | 1 cut(s) | 15 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 164, 472 |
| NciI | CCSGG | 1 cut(s) | 354 |
| NcoI | CCATGG | 1 cut(s) | 441 |
| NdeII | GATC | 2 cut(s) | 28, 180 |
| NlaIII | CATG | 4 cut(s) | 202, 326, 411, 445 |
| NlaIV | GGNNCC | 1 cut(s) | 182 |
| NmuCI | GTSAC | 1 cut(s) | 338 |
| PkrI | GCNGC | 1 cut(s) | 468 |
| PshAI | GACNNNNGTC | 1 cut(s) | 126 |
| PshBI | ATTAAT | 2 cut(s) | 369, 539 |
| Psp6I | CCWGG | 1 cut(s) | 13 |
| PspGI | CCWGG | 1 cut(s) | 13 |
| PspN4I | GGNNCC | 1 cut(s) | 182 |
| PspPI | GGNCC | 1 cut(s) | 351 |
| PsuI | RGATCY | 1 cut(s) | 180 |
| RsaI | GTAC | 2 cut(s) | 133, 251 |
| RsaNI | GTAC | 2 cut(s) | 132, 250 |
| SaqAI | TTAA | 3 cut(s) | 225, 369, 539 |
| SatI | GCNGC | 1 cut(s) | 467 |
| Sau3AI | GATC | 2 cut(s) | 28, 180 |
| Sau96I | GGNCC | 1 cut(s) | 351 |
| ScrFI | CCNGG | 2 cut(s) | 15, 354 |
| SetI | ASST | 5 cut(s) | 19, 69, 139, 193, 301 |
| SfaNI | GCATC | 3 cut(s) | 11, 167, 498 |
| Sse9I | AATT | 1 cut(s) | 536 |
| SsiI | CCGC | 2 cut(s) | 493, 510 |
| SspMI | CTAG | 1 cut(s) | 192 |
| StyD4I | CCNGG | 2 cut(s) | 13, 352 |
| StyI | CCWWGG | 1 cut(s) | 441 |
| TaaI | ACNGT | 5 cut(s) | 10, 148, 177, 426, 435 |
| TaiI | ACGT | 1 cut(s) | 301 |
| TasI | AATT | 1 cut(s) | 536 |
| TatI | WGTACW | 1 cut(s) | 249 |
| Tru1I | TTAA | 3 cut(s) | 225, 369, 539 |
| Tru9I | TTAA | 3 cut(s) | 225, 369, 539 |
| TscAI | CASTG | 2 cut(s) | 182, 502 |
| TseFI | GTSAC | 1 cut(s) | 338 |
| TseI | GCWGC | 1 cut(s) | 466 |
| Tsp45I | GTSAC | 1 cut(s) | 338 |
| TspDTI | ATGAA | 1 cut(s) | 62 |
| TspGWI | ACGGA | 3 cut(s) | 79, 360, 468 |
| TspRI | CASTG | 2 cut(s) | 182, 502 |
| VspI | ATTAAT | 2 cut(s) | 369, 539 |
| XspI | CTAG | 1 cut(s) | 192 |