Rh1BG098100

Domain of unknown function

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
Physical Location & Seq
Reverse (-)
17220984 .. 17228006
7023 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG098100.1

Sequence Viewer

Length: 858 bp
ATGGCAGAGACAGTGAGCGCAAGTGCAATAGTTCTTCAAGTCCTGGGCAGAGAAAACTATGAGGATTGGAGTGTACGGGTCAGAACCTATTTGCTGGCAAAAAATCTTTGGGATGTGGTTGAAGCCCGTGGTGAACCACCTAAACCTCAGCAGGGTGAAGCTAAATATAAGACCTGGAGGAAAAACAATGATGAGGCTCTGCATGCAATTCAAATTTCTTGCGGTCCTGATACATTTCCTTTGATCCGTGACAAAATCACGGCCAAAACTGCGTGGAACACTTTGGTAGCCGAGTTCAAGCCAGATTTACAGGAAACTCCAGGAAGTGCCAACAACTTTCATCAATATGAAGATCTTTTCAAAGTTGTGGTGGATGGCGATTTAGATGCCACAAATGAGTTTCTTGAGAAAAATGAGAATGCAGTAAGTGCCCGAATTACTTACTTAGGCAAAACAGCTCTTCACACCGCAGCCGATGCCGGGCACCTGGAAATAGTGAAGTTGTTAGTGAACAAGATGAAAAAGGAAGACTTAGCGATACAAGGGTATGATGGCAAGACTGCTCTTGTTGTTGCTATAAATAGAGGAGACATGAAAATGGTTAAATGCATGGTTACAAAGAACAAAAATATTGTTCGCATTGTTGATGCTTCCAAAAGACTTCCTGTTGTCTTGGCTTACCGAAATAGCTTTTGGAAGATAGCTAAATATCTCTATTCTCTTACTCCACTGGAAGATTTAATGCCAGAAAATGGACCTAATGGTGCAACACTTGTTTCTCAATGTTTCTATGCAAAAAAATATGCCAAAGAACAGTCTTCCGTCAACAGTTTACAAATGCATCATGACACTCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

285

Amino Acids

32.03

Weight (kDa)

8.25

Isoelectric Point (pI)

29.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4219 PF13961 15 - 41 1.8e-08 Domain of unknown function (DUF4219)
Retrotran_gag_2 PF14223 27 - 101 1.6e-10 gag-polypeptide of LTR copia-type
Ank_2 PF12796 123 - 172 2e-06 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000027)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18670 AT3G18670 AT3G54065
fragaria_vesca FvH4_1g26570 FvH4_1g26570 FvH4_5g19270 FvH4_5g19273 FvH4_5g35840 FvH4_5g36340 FvH4_5g36630 FvH4_5g37181 FvH4_5g37182 FvH4_5g37185 FvH4_5g37240 FvH4_5g37260 FvH4_6g21440 FvH4_6g44571 FvH4_6g44572 FvH4_6g44610 FvH4_6g44620 FvH4_6g44650 FvH4_6g44660 FvH4_6g45151 FvH4_6g45152 FvH4_6g45152 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45154 FvH4_6g51440 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090
malus_domestica MD00G1010300.v1.1 MD00G1010400.v1.1 MD00G1010500.v1.1 MD00G1011000.v1.1 MD00G1011200.v1.1 MD00G1011500.v1.1 MD00G1011900.v1.1 MD03G1133900.v1.1 MD03G1134100.v1.1 MD09G1086300.v1.1 MD09G1086500.v1.1 MD09G1086900.v1.1 MD09G1087000.v1.1 MD09G1088000.v1.1 MD09G1088100.v1.1 MD09G1088200.v1.1 MD09G1088300.v1.1 MD09G1089000.v1.1 MD09G1089300.v1.1 MD09G1133800.v1.1 MD16G1219400.v1.1 MD17G1027900.v1.1 MD17G1028400.v1.1 MD17G1028600.v1.1 MD17G1028700.v1.1 MD17G1028900.v1.1 MD17G1029000.v1.1 MD17G1029100.v1.1 MD17G1029200.v1.1 MD17G1075400.v1.1 MD17G1076000.v1.1 MD17G1077000.v1.1 MD17G1077100.v1.1 MD17G1077800.v1.1 MD17G1078000.v1.1 MD17G1078100.v1.1 MD17G1078300.v1.1 MD17G1100900.v1.1 MD17G1101100.v1.1 MD17G1101400.v1.1 MD17G1104200.v1.1 MD17G1104500.v1.1 MD17G1121300.v1.1 MD17G1121600.v1.1 MD17G1121900.v1.1 MD17G1122700.v1.1 MD17G1218800.v1.1
prunus_persica Prupe.2G033800_v2.0.a1 Prupe.2G033900_v2.0.a1 Prupe.2G080300_v2.0.a1 Prupe.2G080700_v2.0.a1 Prupe.2G080900_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G082000_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082200_v2.0.a1 Prupe.2G082300_v2.0.a1 Prupe.2G082700_v2.0.a1 Prupe.2G082800_v2.0.a1 Prupe.2G082900_v2.0.a1 Prupe.3G235600_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236800_v2.0.a1 Prupe.3G237000_v2.0.a1 Prupe.3G237100_v2.0.a1 Prupe.3G237300_v2.0.a1 Prupe.3G237400_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.4G282500_v2.0.a1 Prupe.4G282500_v2.0.a1
pyrus_communis pycom03g08990 pycom03g09000 pycom09g01180 pycom09g01190 pycom09g01220 pycom09g01230 pycom09g01360 pycom09g01370 pycom09g01380 pycom09g01410 pycom09g05500 pycom11g10280 pycom11g10290 pycom11g10310 pycom16g18270 pycom16g18280 pycom17g02280 pycom17g02290 pycom17g02300 pycom17g02360 pycom17g02390 pycom17g02410 pycom17g02440 pycom17g02460 pycom17g02470 pycom17g02480 pycom17g02510 pycom17g02530 pycom17g02540 pycom17g02550 pycom17g02560 pycom17g02570 pycom17g02580 pycom17g02630 pycom17g02640 pycom17g04970 pycom17g04980 pycom17g05010 pycom17g07090 pycom17g07620 pycom17g07630 pycom17g07640 pycom17g07650 pycom17g07660 pycom17g07740 pycom17g07760 pycom17g07770 pycom17g09580 pycom17g11170 pycom17g11200 pycom17g11220 pycom17g11240 pycom17g11250 pycom17g11300 pycom17g11340 pycom17g11380 pycom17g11440
rosa_chinensis RchiOBHm_Chr1g0332901 RchiOBHm_Chr1g0338981 RchiOBHm_Chr1g0338991 RchiOBHm_Chr1g0341201 RchiOBHm_Chr1g0341211 RchiOBHm_Chr1g0342721 RchiOBHm_Chr1g0343191 RchiOBHm_Chr2g0146761 RchiOBHm_Chr2g0161791 RchiOBHm_Chr2g0161801 RchiOBHm_Chr2g0161841 RchiOBHm_Chr2g0162041 RchiOBHm_Chr2g0162651 RchiOBHm_Chr2g0162691 RchiOBHm_Chr2g0162701 RchiOBHm_Chr2g0162711 RchiOBHm_Chr2g0162721 RchiOBHm_Chr2g0162811 RchiOBHm_Chr2g0162831 RchiOBHm_Chr2g0162841 RchiOBHm_Chr4g0416381 RchiOBHm_Chr4g0416391 RchiOBHm_Chr5g0075981 RchiOBHm_Chr6g0276101 RchiOBHm_Chr7g0214581 RchiOBHm_Chr7g0214631 RchiOBHm_Chr7g0214651 RchiOBHm_Chr7g0214721 RchiOBHm_Chr7g0223161 RchiOBHm_Chr7g0230661 RchiOBHm_Chr7g0230751 RchiOBHm_Chr7g0230781 RchiOBHm_Chr7g0234581 RchiOBHm_Chr7g0234601 RchiOBHm_Chr7g0237561 RchiOBHm_Chr7g0237571 RchiOBHm_Chr7g0238781 RchiOBHm_Chr7g0238811 RchiOBHm_Chr7g0242161 RchiOBHm_Chr7g0242401 RchiOBHm_Chr7g0242451 RchiOBHm_Chr7g0242921 RchiOBHm_Chr7g0242981 RchiOBHm_Chr7g0243111 RchiOBHm_Chr7g0243251 RchiOBHm_Chr7g0243331
rosa_laevigata RLG00000000803 RLG00000000807 RLG00000000809 RLG00000000811 RLG00000000814 RLG00000000854 RLG00000000859 RLG00000000864 RLG00000000994 RLG00000000995 RLG00000001458 RLG00000001461 RLG00000001474 RLG00000001476 RLG00000002729 RLG00000002730 RLG00000003505 RLG00000008871 RLG00000008873 RLG00000018513 RLG00000021300 RLG00000021303 RLG00000021318 RLG00000021356 RLG00000021357 RLG00000029070 RLG00000029071 RLG00000029171 RLG00000029189 RLG00000029190 RLG00000029640 RLG00000034635
rosa_multiflora Rmu_co8149086.1_g000001 Rmu_co8460577.1_g000001 Rmu_sc0000429.1_g000062 Rmu_sc0000429.1_g000071 Rmu_sc0000429.1_g000081 Rmu_sc0000863.1_g000020 Rmu_sc0001488.1_g000011 Rmu_sc0001545.1_g000007 Rmu_sc0001849.1_g000068 Rmu_sc0001993.1_g000003 Rmu_sc0002222.1_g000002 Rmu_sc0002308.1_g000053 Rmu_sc0002308.1_g000069 Rmu_sc0002480.1_g000007 Rmu_sc0003179.1_g000041 Rmu_sc0004213.1_g000011 Rmu_sc0007101.1_g000012 Rmu_sc0008565.1_g000011 Rmu_sc0009298.1_g000003 Rmu_sc0010407.1_g000009 Rmu_sc0010407.1_g000013 Rmu_sc0026966.1_g000004 Rmu_ssc0000152.1_g000012 Rmu_ssc0000152.1_g000014 Rmu_ssc0000295.1_g000021 Rmu_ssc0000295.1_g000026
rosa_roxburghii Rroxscaffold_1G00029600 Rroxscaffold_2G00087790 Rroxscaffold_2G00087800 Rroxscaffold_2G00088360 Rroxscaffold_2G00088500 Rroxscaffold_2G00088530 Rroxscaffold_2G00088590 Rroxscaffold_3G00221570 Rroxscaffold_3G00222190 Rroxscaffold_3G00222240 Rroxscaffold_3G00222880 Rroxscaffold_3G00222900 Rroxscaffold_3G00223990 Rroxscaffold_3G00229750 Rroxscaffold_3G00229760 Rroxscaffold_3G00245140 Rroxscaffold_3G00245150 Rroxscaffold_3G00245200 Rroxscaffold_3G00253520 Rroxscaffold_3G00253530 Rroxscaffold_4G00294500 Rroxscaffold_4G00311800 Rroxscaffold_4G00311830 Rroxscaffold_4G00311850 Rroxscaffold_4G00313180 Rroxscaffold_4G00313210 Rroxscaffold_4G00316270 Rroxscaffold_4G00317910 Rroxscaffold_4G00317920 Rroxscaffold_5G00349290 Rroxscaffold_5G00349300 Rroxscaffold_5G00349310 Rroxscaffold_5G00351950 Rroxscaffold_5G00351960 Rroxscaffold_5G00353390 Rroxscaffold_7G00192540
rosa_rugosa Rorug01G0102500 Rorug01G0102600 Rorug01G0146400.1 Rorug01G0146500.1 Rorug01G0159400.1 Rorug01G0159500.1 Rorug02G0491900 Rorug02G0492000 Rorug02G0492100 Rorug02G0492200 Rorug02G0492300 Rorug02G0492400 Rorug02G0492500 Rorug02G0492700 Rorug02G0498500 Rorug02G0498600 Rorug02G0498800 Rorug04G0006900 Rorug04G0053700 Rorug06G0002000 Rorug06G0002100 Rorug07G0304700 Rorug07G0304800 Rorug07G0304800 Rorug07G0304800 Rorug07G0305300 Rorug07G0305400 Rorug07G0305500 Rorug07G0305500 Rorug07G0318300 Rorug07G0318600 Rorug07G0323600
rosa_samantha Rh1AG128900 Rh1AG162500 Rh1AG163000 Rh1AG164000 Rh1AG164700 Rh1AG173200 Rh1AG173300 Rh1AG173800 Rh1BG098100 Rh1BG129800 Rh1BG130600 Rh1BG141300 Rh1BG141500 Rh1BG141600 Rh1CG122700 Rh1CG151900 Rh1CG152400 Rh1CG153100 Rh1CG153500 Rh1CG161400 Rh1CG161600 Rh1DG134200 Rh1DG173500 Rh1DG173700 Rh2AG558100 Rh2AG558500 Rh2AG560200 Rh2AG564700 Rh2AG564800 Rh2BG465600 Rh2BG571700 Rh2BG572000 Rh2BG573500 Rh2CG439800 Rh2CG541800 Rh2CG542100 Rh2CG542200 Rh2CG543800 Rh2CG547300 Rh2DG474700 Rh2DG580600 Rh2DG580900 Rh2DG581200 Rh2DG581700 Rh2DG581800 Rh2DG583500 Rh2DG587200 Rh2DG587300 Rh2DG587400 Rh4AG128900 Rh4AG203800 Rh4AG319900 Rh4AG320000 Rh4BG122200 Rh4BG201100 Rh4CG136000 Rh4DG122400 Rh4DG201100 Rh4DG323600 Rh6BG077000 Rh6DG206200 Rh7AG282300 Rh7AG282500 Rh7AG283400 Rh7AG358600 Rh7AG414500 Rh7AG415200 Rh7AG415500 Rh7AG461700 Rh7AG469300 Rh7AG477800 Rh7BG273900 Rh7BG274000 Rh7BG390400 Rh7BG390500 Rh7BG391500 Rh7BG391800 Rh7BG408300 Rh7BG432000 Rh7BG439200 Rh7BG449200 Rh7BG449900 Rh7BG450400 Rh7BG450500 Rh7CG220900 Rh7CG301600 Rh7CG302700 Rh7CG377000 Rh7CG433900 Rh7CG434200 Rh7CG478800 Rh7DG286200 Rh7DG354000 Rh7DG424600 Rh7DG448000 Rh7DG462800 Rh7DG462900
rosa_wichuraiana Rw0G003440 Rw0G011970 Rw0G017120 Rw0G017130 Rw0G017140 Rw0G018470 Rw0G018480 Rw0G020440 Rw1G010470 Rw2G046180 Rw2G046210 Rw2G046230 Rw2G046390 Rw2G046400 Rw2G046710 Rw2G046720 Rw2G046730 Rw3G025310 Rw4G010410 Rw4G017250 Rw6G018270 Rw7G018180 Rw7G024130 Rw7G024160 Rw7G024170 Rw7G034060 Rw7G034250 Rw7G034260 Rw7G034400 Rw7G034410 Rw7G038210 Rw7G039020 Rw7G039060 Rw7G039280 Rw7G039400 Rw7G039470 Rw7G039880 Rw7G039890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 483
AccB7I CCANNNNNTGG 1 cut(s) 752
AciI CCGC 2 cut(s) 222, 468
AclWI GGATC 1 cut(s) 238
AcoI YGGCCR 1 cut(s) 261
AcsI RAATTY 1 cut(s) 213
AfaI GTAC 1 cut(s) 75
AfiI CCNNNNNNNGG 3 cut(s) 152, 480, 752
AgsI TTSAA 5 cut(s) 38, 122, 212, 298, 361
AjnI CCWGG 4 cut(s) 42, 173, 319, 486
AjuI GAANNNNNNNTTGG 2 cut(s) 676, 708
AluBI AGCT 4 cut(s) 161, 458, 690, 704
AluI AGCT 4 cut(s) 161, 458, 690, 704
Alw26I GTCTC 2 cut(s) 2, 582
AlwI GGATC 1 cut(s) 238
AoxI GGCC 1 cut(s) 261
ApeKI GCWGC 1 cut(s) 470
ApoI RAATTY 1 cut(s) 213
AspLEI GCGC 1 cut(s) 20
AspS9I GGNCC 2 cut(s) 224, 755
AsuC2I CCSGG 1 cut(s) 481
AsuHPI GGTGA 2 cut(s) 143, 167
AvaII GGWCC 2 cut(s) 224, 755
BaeGI GKGCMC 2 cut(s) 433, 486
BaeI ACNNNNGTAYC 2 cut(s) 530, 563
BanI GGYRCC 1 cut(s) 483
BbsI GAAGAC 2 cut(s) 534, 810
BbvCI CCTCAGC 1 cut(s) 147
BbvI GCAGC 1 cut(s) 482
BccI CCATC 2 cut(s) 368, 545
BceAI ACGGC 1 cut(s) 276
BcgI CGANNNNNNTGC 2 cut(s) 368, 402
BciT130I CCWGG 4 cut(s) 44, 175, 321, 488
BcnI CCSGG 1 cut(s) 481
BcoDI GTCTC 2 cut(s) 2, 582
BglII AGATCT 1 cut(s) 352
BisI GCNGC 1 cut(s) 471
BlsI GCNGC 1 cut(s) 472
Bme1390I CCNGG 5 cut(s) 44, 175, 321, 481, 488
Bme18I GGWCC 2 cut(s) 224, 755
BmgT120I GGNCC 2 cut(s) 224, 755
BmiI GGNNCC 1 cut(s) 485
BmrFI CCNGG 5 cut(s) 44, 175, 321, 481, 488
BmsI GCATC 4 cut(s) 376, 466, 637, 850
BpiI GAAGAC 2 cut(s) 534, 810
BpmI CTGGAG 2 cut(s) 196, 303
Bpu10I CCTNAGC 1 cut(s) 147
BpuEI CTTGAG 1 cut(s) 425
BpuMI CCSGG 1 cut(s) 481
BsaJI CCNNGG 2 cut(s) 43, 127
Bsc4I CCNNNNNNNGG 3 cut(s) 152, 480, 752
Bse1I ACTGG 1 cut(s) 735
BseBI CCWGG 4 cut(s) 44, 175, 321, 488
BseDI CCNNGG 2 cut(s) 43, 127
BseGI GGATG 2 cut(s) 118, 379
BseLI CCNNNNNNNGG 3 cut(s) 152, 480, 752
BseMII CTCAG 1 cut(s) 161
BseNI ACTGG 1 cut(s) 735
BseRI GAGGAG 1 cut(s) 600
BseSI GKGCMC 2 cut(s) 433, 486
BseXI GCAGC 1 cut(s) 482
BshFI GGCC 1 cut(s) 263
BshNI GGYRCC 1 cut(s) 483
BsiSI CCGG 1 cut(s) 480
BslI CCNNNNNNNGG 3 cut(s) 152, 480, 752
BsmAI GTCTC 2 cut(s) 2, 582
BsmI GAATGC 1 cut(s) 424
BsnI GGCC 1 cut(s) 263
Bsp1286I GDGCHC 2 cut(s) 433, 486
Bsp143I GATC 2 cut(s) 243, 352
BspACI CCGC 2 cut(s) 222, 468
BspANI GGCC 1 cut(s) 263
BspCNI CTCAG 1 cut(s) 160
BspHI TCATGA 1 cut(s) 844
BspLI GGNNCC 1 cut(s) 485
BspPI GGATC 1 cut(s) 238
BspQI GCTCTTC 1 cut(s) 465
BspT107I GGYRCC 1 cut(s) 483
BsrI ACTGG 1 cut(s) 735
BssECI CCNNGG 2 cut(s) 43, 127
BssMI GATC 2 cut(s) 243, 352
Bst2UI CCWGG 4 cut(s) 44, 175, 321, 488
Bst4CI ACNGT 3 cut(s) 13, 816, 830
Bst6I CTCTTC 1 cut(s) 465
BstAPI GCANNNNNTGC 2 cut(s) 428, 476
BstC8I GCNNGC 2 cut(s) 96, 204
BstDEI CTNAG 3 cut(s) 147, 445, 532
BstDSI CCRYGG 1 cut(s) 127
BstF5I GGATG 2 cut(s) 118, 379
BstHHI GCGC 1 cut(s) 20
BstKTI GATC 2 cut(s) 246, 355
BstMAI GTCTC 2 cut(s) 2, 582
BstMBI GATC 2 cut(s) 243, 352
BstMWI GCNNNNNNNGC 4 cut(s) 203, 269, 428, 476
BstNI CCWGG 4 cut(s) 44, 175, 321, 488
BstNSI RCATGY 1 cut(s) 206
BstSCI CCNGG 5 cut(s) 42, 173, 319, 479, 486
BstSLI GKGCMC 2 cut(s) 433, 486
BstV1I GCAGC 1 cut(s) 482
BstV2I GAAGAC 2 cut(s) 534, 810
BstX2I RGATCY 1 cut(s) 352
BstYI RGATCY 1 cut(s) 352
BsuRI GGCC 1 cut(s) 263
BtgI CCRYGG 1 cut(s) 127
BtsCI GGATG 2 cut(s) 118, 379
BtsIMutI CAGTG 2 cut(s) 18, 728
Cac8I GCNNGC 2 cut(s) 96, 204
CciI TCATGA 1 cut(s) 844
CfoI GCGC 1 cut(s) 20
Cfr13I GGNCC 2 cut(s) 224, 755
Csp6I GTAC 1 cut(s) 74
CviAII CATG 4 cut(s) 203, 592, 610, 845
CviQI GTAC 1 cut(s) 74
DdeI CTNAG 3 cut(s) 147, 445, 532
DpnI GATC 2 cut(s) 245, 354
DpnII GATC 2 cut(s) 243, 352
EaeI YGGCCR 1 cut(s) 261
Eam1104I CTCTTC 1 cut(s) 465
EarI CTCTTC 1 cut(s) 465
Eco47I GGWCC 2 cut(s) 224, 755
EcoRII CCWGG 4 cut(s) 42, 173, 319, 486
EcoT22I ATGCAT 2 cut(s) 611, 843
FaeI CATG 4 cut(s) 206, 595, 613, 848
FalI AAGNNNNNCTT 2 cut(s) 515, 547
FatI CATG 4 cut(s) 202, 591, 609, 844
Fnu4HI GCNGC 1 cut(s) 471
FokI GGATG 2 cut(s) 125, 386
Fsp4HI GCNGC 1 cut(s) 471
GlaI GCGC 1 cut(s) 19
GluI GCNGC 1 cut(s) 471
GsuI CTGGAG 2 cut(s) 196, 303
HaeIII GGCC 1 cut(s) 263
HapII CCGG 1 cut(s) 480
HhaI GCGC 1 cut(s) 20
Hin1II CATG 4 cut(s) 206, 595, 613, 848
Hin6I GCGC 1 cut(s) 18
HinP1I GCGC 1 cut(s) 18
HincII GTYRAC 1 cut(s) 826
HindII GTYRAC 1 cut(s) 826
HpaII CCGG 1 cut(s) 480
HphI GGTGA 2 cut(s) 143, 167
Hpy166II GTNNAC 5 cut(s) 74, 134, 511, 826, 833
Hpy188I TCNGA 1 cut(s) 83
Hpy188III TCNNGA 3 cut(s) 227, 404, 845
Hpy8I GTNNAC 5 cut(s) 74, 134, 511, 826, 833
HpyCH4III ACNGT 3 cut(s) 13, 816, 830
HpyCH4V TGCA 8 cut(s) 26, 202, 206, 422, 609, 767, 794, 841
HpyF10VI GCNNNNNNNGC 4 cut(s) 203, 269, 428, 476
HpyF3I CTNAG 3 cut(s) 147, 445, 532
Hsp92II CATG 4 cut(s) 206, 595, 613, 848
HspAI GCGC 1 cut(s) 18
Kzo9I GATC 2 cut(s) 243, 352
LguI GCTCTTC 1 cut(s) 465
Lsp1109I GCAGC 1 cut(s) 482
LweI GCATC 4 cut(s) 376, 466, 637, 850
MaeIII GTNAC 2 cut(s) 248, 613
MalI GATC 2 cut(s) 245, 354
MboI GATC 2 cut(s) 243, 352
MboII GAAGA 7 cut(s) 26, 362, 452, 539, 709, 746, 810
MflI RGATCY 1 cut(s) 352
MhlI GDGCHC 2 cut(s) 433, 486
MluCI AATT 3 cut(s) 207, 213, 435
MnlI CCTC 5 cut(s) 55, 156, 171, 187, 578
Mph1103I ATGCAT 2 cut(s) 611, 843
MseI TTAA 2 cut(s) 603, 740
MslI CAYNNNNRTG 2 cut(s) 345, 596
MspI CCGG 1 cut(s) 480
MspR9I CCNGG 5 cut(s) 44, 175, 321, 481, 488
Mva1269I GAATGC 1 cut(s) 424
MvaI CCWGG 4 cut(s) 44, 175, 321, 488
MwoI GCNNNNNNNGC 4 cut(s) 203, 269, 428, 476
NciI CCSGG 1 cut(s) 481
NdeII GATC 2 cut(s) 243, 352
NlaIII CATG 4 cut(s) 206, 595, 613, 848
NlaIV GGNNCC 1 cut(s) 485
NmeAIII GCCGAG 1 cut(s) 316
NmuCI GTSAC 1 cut(s) 248
NsiI ATGCAT 2 cut(s) 611, 843
NspI RCATGY 1 cut(s) 206
PaeI GCATGC 1 cut(s) 206
PagI TCATGA 1 cut(s) 844
PciSI GCTCTTC 1 cut(s) 465
PctI GAATGC 1 cut(s) 424
PflMI CCANNNNNTGG 1 cut(s) 752
PfoI TCCNGGA 1 cut(s) 319
PkrI GCNGC 1 cut(s) 472
Psp6I CCWGG 4 cut(s) 42, 173, 319, 486
PspGI CCWGG 4 cut(s) 42, 173, 319, 486
PspN4I GGNNCC 1 cut(s) 485
PspPI GGNCC 2 cut(s) 224, 755
PsuI RGATCY 1 cut(s) 352
RsaI GTAC 1 cut(s) 75
RsaNI GTAC 1 cut(s) 74
RseI CAYNNNNRTG 2 cut(s) 345, 596
SapI GCTCTTC 1 cut(s) 465
SaqAI TTAA 2 cut(s) 603, 740
SatI GCNGC 1 cut(s) 471
Sau3AI GATC 2 cut(s) 243, 352
Sau96I GGNCC 2 cut(s) 224, 755
ScrFI CCNGG 5 cut(s) 44, 175, 321, 481, 488
SduI GDGCHC 2 cut(s) 433, 486
SfaNI GCATC 4 cut(s) 376, 466, 637, 850
SinI GGWCC 2 cut(s) 224, 755
SmiMI CAYNNNNRTG 2 cut(s) 345, 596
SmlI CTYRAG 1 cut(s) 404
SmoI CTYRAG 1 cut(s) 404
SphI GCATGC 1 cut(s) 206
Sse9I AATT 3 cut(s) 207, 213, 435
SsiI CCGC 2 cut(s) 222, 468
SspI AATATT 1 cut(s) 631
StyD4I CCNGG 5 cut(s) 42, 173, 319, 479, 486
TaaI ACNGT 3 cut(s) 13, 816, 830
TasI AATT 3 cut(s) 207, 213, 435
Tru1I TTAA 2 cut(s) 603, 740
Tru9I TTAA 2 cut(s) 603, 740
TscAI CASTG 2 cut(s) 18, 735
TseFI GTSAC 1 cut(s) 248
TseI GCWGC 1 cut(s) 470
Tsp45I GTSAC 1 cut(s) 248
TspDTI ATGAA 4 cut(s) 329, 363, 533, 608
TspGWI ACGGA 2 cut(s) 236, 811
TspRI CASTG 2 cut(s) 18, 735
Van91I CCANNNNNTGG 1 cut(s) 752
VpaK11BI GGWCC 2 cut(s) 224, 755
XapI RAATTY 1 cut(s) 213
XceI RCATGY 1 cut(s) 206
Zsp2I ATGCAT 2 cut(s) 611, 843
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.