protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 618 |
| Acc36I | ACCTGC | 1 cut(s) | 19 |
| AciI | CCGC | 1 cut(s) | 61 |
| AclWI | GGATC | 1 cut(s) | 36 |
| AcvI | CACGTG | 1 cut(s) | 563 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 72, 73, 365, 506 |
| AflII | CTTAAG | 1 cut(s) | 422 |
| AflIII | ACRYGT | 2 cut(s) | 560, 562 |
| AgsI | TTSAA | 2 cut(s) | 52, 443 |
| AjiI | CACGTC | 2 cut(s) | 175, 190 |
| AluBI | AGCT | 5 cut(s) | 153, 448, 472, 525, 592 |
| AluI | AGCT | 5 cut(s) | 153, 448, 472, 525, 592 |
| Alw26I | GTCTC | 4 cut(s) | 166, 180, 224, 513 |
| AlwI | GGATC | 1 cut(s) | 36 |
| Ama87I | CYCGRG | 1 cut(s) | 183 |
| AoxI | GGCC | 1 cut(s) | 63 |
| ApaI | GGGCCC | 1 cut(s) | 67 |
| ApeKI | GCWGC | 2 cut(s) | 113, 214 |
| AspLEI | GCGC | 2 cut(s) | 141, 467 |
| AspS9I | GGNCC | 2 cut(s) | 63, 64 |
| AsuC2I | CCSGG | 2 cut(s) | 67, 578 |
| AsuHPI | GGTGA | 1 cut(s) | 542 |
| AvaI | CYCGRG | 1 cut(s) | 183 |
| BaeGI | GKGCMC | 1 cut(s) | 67 |
| BanII | GRGCYC | 1 cut(s) | 67 |
| BbrPI | CACGTG | 1 cut(s) | 563 |
| BbvI | GCAGC | 2 cut(s) | 125, 201 |
| BccI | CCATC | 2 cut(s) | 17, 160 |
| BceAI | ACGGC | 4 cut(s) | 159, 202, 282, 478 |
| BcnI | CCSGG | 2 cut(s) | 67, 578 |
| BcoDI | GTCTC | 4 cut(s) | 166, 180, 224, 513 |
| BfaI | CTAG | 3 cut(s) | 95, 248, 516 |
| BfmI | CTRYAG | 1 cut(s) | 12 |
| BfoI | RGCGCY | 1 cut(s) | 468 |
| BfrI | CTTAAG | 1 cut(s) | 422 |
| BfuAI | ACCTGC | 1 cut(s) | 19 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 136 |
| BisI | GCNGC | 2 cut(s) | 114, 215 |
| BlpI | GCTNAGC | 1 cut(s) | 468 |
| BlsI | GCNGC | 2 cut(s) | 115, 216 |
| Bme1390I | CCNGG | 2 cut(s) | 67, 578 |
| BmeT110I | CYCGRG | 1 cut(s) | 183 |
| BmgBI | CACGTC | 2 cut(s) | 175, 190 |
| BmgT120I | GGNCC | 2 cut(s) | 63, 64 |
| BmiI | GGNNCC | 1 cut(s) | 65 |
| BmrFI | CCNGG | 2 cut(s) | 67, 578 |
| BmsI | GCATC | 1 cut(s) | 244 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 272, 304 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 468 |
| BpuMI | CCSGG | 2 cut(s) | 67, 578 |
| BsaAI | YACGTR | 1 cut(s) | 563 |
| BsaBI | GATNNNNATC | 1 cut(s) | 27 |
| BsaJI | CCNNGG | 1 cut(s) | 364 |
| BsaWI | WCCGGW | 1 cut(s) | 527 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 72, 73, 365, 506 |
| Bse3DI | GCAATG | 1 cut(s) | 510 |
| Bse8I | GATNNNNATC | 1 cut(s) | 27 |
| BseDI | CCNNGG | 1 cut(s) | 364 |
| BseGI | GGATG | 2 cut(s) | 103, 586 |
| BseJI | GATNNNNATC | 1 cut(s) | 27 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 72, 73, 365, 506 |
| BseMI | GCAATG | 1 cut(s) | 510 |
| BseMII | CTCAG | 2 cut(s) | 303, 459 |
| BseRI | GAGGAG | 2 cut(s) | 221, 469 |
| BseSI | GKGCMC | 1 cut(s) | 67 |
| BseXI | GCAGC | 2 cut(s) | 125, 201 |
| BshFI | GGCC | 1 cut(s) | 65 |
| BsiHKCI | CYCGRG | 1 cut(s) | 183 |
| BsiSI | CCGG | 3 cut(s) | 67, 528, 577 |
| BslFI | GGGAC | 1 cut(s) | 473 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 72, 73, 365, 506 |
| BsmAI | GTCTC | 4 cut(s) | 166, 180, 224, 513 |
| BsmBI | CGTCTC | 1 cut(s) | 180 |
| BsmFI | GGGAC | 1 cut(s) | 473 |
| BsnI | GGCC | 1 cut(s) | 65 |
| BsoBI | CYCGRG | 1 cut(s) | 183 |
| Bsp120I | GGGCCC | 1 cut(s) | 63 |
| Bsp1286I | GDGCHC | 1 cut(s) | 67 |
| Bsp143I | GATC | 2 cut(s) | 28, 300 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 468 |
| BspACI | CCGC | 1 cut(s) | 61 |
| BspANI | GGCC | 1 cut(s) | 65 |
| BspCNI | CTCAG | 2 cut(s) | 302, 460 |
| BspLI | GGNNCC | 1 cut(s) | 65 |
| BspMAI | CTGCAG | 1 cut(s) | 16 |
| BspMI | ACCTGC | 1 cut(s) | 19 |
| BspPI | GGATC | 1 cut(s) | 36 |
| BspTI | CTTAAG | 1 cut(s) | 422 |
| BsrDI | GCAATG | 1 cut(s) | 510 |
| BssECI | CCNNGG | 1 cut(s) | 364 |
| BssMI | GATC | 2 cut(s) | 28, 300 |
| BstAFI | CTTAAG | 1 cut(s) | 422 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 11 |
| BstBAI | YACGTR | 1 cut(s) | 563 |
| BstC8I | GCNNGC | 4 cut(s) | 63, 132, 393, 590 |
| BstDEI | CTNAG | 3 cut(s) | 149, 289, 468 |
| BstDSI | CCRYGG | 1 cut(s) | 364 |
| BstF5I | GGATG | 2 cut(s) | 103, 586 |
| BstH2I | RGCGCY | 1 cut(s) | 468 |
| BstHHI | GCGC | 2 cut(s) | 141, 467 |
| BstKTI | GATC | 2 cut(s) | 31, 303 |
| BstMAI | GTCTC | 4 cut(s) | 166, 180, 224, 513 |
| BstMBI | GATC | 2 cut(s) | 28, 300 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 11, 67, 136, 392 |
| BstNSI | RCATGY | 1 cut(s) | 395 |
| BstSCI | CCNGG | 2 cut(s) | 65, 576 |
| BstSFI | CTRYAG | 1 cut(s) | 12 |
| BstSLI | GKGCMC | 1 cut(s) | 67 |
| BstV1I | GCAGC | 2 cut(s) | 125, 201 |
| BsuRI | GGCC | 1 cut(s) | 65 |
| BtgI | CCRYGG | 1 cut(s) | 364 |
| BtgZI | GCGATG | 1 cut(s) | 267 |
| BtrI | CACGTC | 2 cut(s) | 175, 190 |
| BtsCI | GGATG | 2 cut(s) | 103, 586 |
| BveI | ACCTGC | 1 cut(s) | 19 |
| Cac8I | GCNNGC | 4 cut(s) | 63, 132, 393, 590 |
| CfoI | GCGC | 2 cut(s) | 141, 467 |
| Cfr13I | GGNCC | 2 cut(s) | 63, 64 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 363, 398 |
| CviAII | CATG | 2 cut(s) | 353, 392 |
| DdeI | CTNAG | 3 cut(s) | 149, 289, 468 |
| DpnI | GATC | 2 cut(s) | 30, 302 |
| DpnII | GATC | 2 cut(s) | 28, 300 |
| Eco24I | GRGCYC | 1 cut(s) | 67 |
| Eco72I | CACGTG | 1 cut(s) | 563 |
| Eco88I | CYCGRG | 1 cut(s) | 183 |
| EcoT38I | GRGCYC | 1 cut(s) | 67 |
| Esp3I | CGTCTC | 1 cut(s) | 180 |
| FaeI | CATG | 2 cut(s) | 356, 395 |
| FaiI | YATR | 7 cut(s) | 272, 320, 354, 393, 544, 601, 618 |
| FaqI | GGGAC | 1 cut(s) | 473 |
| FatI | CATG | 2 cut(s) | 352, 391 |
| FauI | CCCGC | 1 cut(s) | 54 |
| Fnu4HI | GCNGC | 2 cut(s) | 114, 215 |
| FokI | GGATG | 2 cut(s) | 90, 593 |
| FriOI | GRGCYC | 1 cut(s) | 67 |
| Fsp4HI | GCNGC | 2 cut(s) | 114, 215 |
| FspBI | CTAG | 3 cut(s) | 95, 248, 516 |
| GlaI | GCGC | 2 cut(s) | 140, 466 |
| GluI | GCNGC | 2 cut(s) | 114, 215 |
| HaeII | RGCGCY | 1 cut(s) | 468 |
| HaeIII | GGCC | 1 cut(s) | 65 |
| HapII | CCGG | 3 cut(s) | 67, 528, 577 |
| HhaI | GCGC | 2 cut(s) | 141, 467 |
| Hin1II | CATG | 2 cut(s) | 356, 395 |
| Hin6I | GCGC | 2 cut(s) | 139, 465 |
| HinP1I | GCGC | 2 cut(s) | 139, 465 |
| HinfI | GANTC | 2 cut(s) | 287, 533 |
| HpaII | CCGG | 3 cut(s) | 67, 528, 577 |
| HphI | GGTGA | 1 cut(s) | 542 |
| Hpy188I | TCNGA | 3 cut(s) | 33, 292, 596 |
| Hpy188III | TCNNGA | 3 cut(s) | 107, 163, 185 |
| HpyAV | CCTTC | 1 cut(s) | 356 |
| HpyCH4IV | ACGT | 3 cut(s) | 174, 189, 562 |
| HpyCH4V | TGCA | 2 cut(s) | 14, 391 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 11, 67, 136, 392 |
| HpyF3I | CTNAG | 3 cut(s) | 149, 289, 468 |
| HpySE526I | ACGT | 3 cut(s) | 174, 189, 562 |
| Hsp92II | CATG | 2 cut(s) | 356, 395 |
| HspAI | GCGC | 2 cut(s) | 139, 465 |
| Kzo9I | GATC | 2 cut(s) | 28, 300 |
| LmnI | GCTCC | 1 cut(s) | 530 |
| LpnPI | CCDG | 7 cut(s) | 24, 80, 120, 144, 541, 590, 602 |
| Lsp1109I | GCAGC | 2 cut(s) | 125, 201 |
| LweI | GCATC | 1 cut(s) | 244 |
| MaeI | CTAG | 3 cut(s) | 95, 248, 516 |
| MaeII | ACGT | 3 cut(s) | 174, 189, 562 |
| MaeIII | GTNAC | 2 cut(s) | 284, 430 |
| MalI | GATC | 2 cut(s) | 30, 302 |
| MboI | GATC | 2 cut(s) | 28, 300 |
| MboII | GAAGA | 2 cut(s) | 40, 340 |
| MfeI | CAATTG | 1 cut(s) | 548 |
| MhlI | GDGCHC | 1 cut(s) | 67 |
| MluCI | AATT | 2 cut(s) | 306, 548 |
| MlyI | GAGTC | 1 cut(s) | 281 |
| MseI | TTAA | 3 cut(s) | 221, 312, 423 |
| MspCI | CTTAAG | 1 cut(s) | 422 |
| MspI | CCGG | 3 cut(s) | 67, 528, 577 |
| MspR9I | CCNGG | 2 cut(s) | 67, 578 |
| MunI | CAATTG | 1 cut(s) | 548 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 11, 67, 136, 392 |
| NciI | CCSGG | 2 cut(s) | 67, 578 |
| NdeII | GATC | 2 cut(s) | 28, 300 |
| NlaIII | CATG | 2 cut(s) | 356, 395 |
| NlaIV | GGNNCC | 1 cut(s) | 65 |
| NmuCI | GTSAC | 1 cut(s) | 284 |
| NspI | RCATGY | 1 cut(s) | 395 |
| PaeI | GCATGC | 1 cut(s) | 395 |
| PaeR7I | CTCGAG | 1 cut(s) | 183 |
| PfeI | GAWTC | 1 cut(s) | 533 |
| PfoI | TCCNGGA | 1 cut(s) | 576 |
| PkrI | GCNGC | 2 cut(s) | 115, 216 |
| PleI | GAGTC | 1 cut(s) | 281 |
| PmaCI | CACGTG | 1 cut(s) | 563 |
| PmlI | CACGTG | 1 cut(s) | 563 |
| PpsI | GAGTC | 1 cut(s) | 281 |
| Ppu21I | YACGTR | 1 cut(s) | 563 |
| PsiI | TTATAA | 1 cut(s) | 618 |
| PspCI | CACGTG | 1 cut(s) | 563 |
| PspN4I | GGNNCC | 1 cut(s) | 65 |
| PspOMI | GGGCCC | 1 cut(s) | 63 |
| PspPI | GGNCC | 2 cut(s) | 63, 64 |
| PstI | CTGCAG | 1 cut(s) | 16 |
| SaqAI | TTAA | 3 cut(s) | 221, 312, 423 |
| SatI | GCNGC | 2 cut(s) | 114, 215 |
| Sau3AI | GATC | 2 cut(s) | 28, 300 |
| Sau96I | GGNCC | 2 cut(s) | 63, 64 |
| SchI | GAGTC | 1 cut(s) | 281 |
| ScrFI | CCNGG | 2 cut(s) | 67, 578 |
| SduI | GDGCHC | 1 cut(s) | 67 |
| SfaNI | GCATC | 1 cut(s) | 244 |
| SfcI | CTRYAG | 1 cut(s) | 12 |
| Sfr274I | CTCGAG | 1 cut(s) | 183 |
| SlaI | CTCGAG | 1 cut(s) | 183 |
| SmlI | CTYRAG | 2 cut(s) | 183, 422 |
| SmoI | CTYRAG | 2 cut(s) | 183, 422 |
| SphI | GCATGC | 1 cut(s) | 395 |
| Sse9I | AATT | 2 cut(s) | 306, 548 |
| SsiI | CCGC | 1 cut(s) | 61 |
| SspMI | CTAG | 3 cut(s) | 95, 248, 516 |
| StyD4I | CCNGG | 2 cut(s) | 65, 576 |
| TaiI | ACGT | 3 cut(s) | 177, 192, 565 |
| TaqI | TCGA | 3 cut(s) | 164, 184, 303 |
| TasI | AATT | 2 cut(s) | 306, 548 |
| TfiI | GAWTC | 1 cut(s) | 533 |
| Tru1I | TTAA | 3 cut(s) | 221, 312, 423 |
| Tru9I | TTAA | 3 cut(s) | 221, 312, 423 |
| TseFI | GTSAC | 1 cut(s) | 284 |
| TseI | GCWGC | 2 cut(s) | 113, 214 |
| Tsp45I | GTSAC | 1 cut(s) | 284 |
| TspDTI | ATGAA | 1 cut(s) | 239 |
| Vha464I | CTTAAG | 1 cut(s) | 422 |
| XceI | RCATGY | 1 cut(s) | 395 |
| XhoI | CTCGAG | 1 cut(s) | 183 |
| XspI | CTAG | 3 cut(s) | 95, 248, 516 |