protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 48 - 160 | 1.3e-21 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 253 |
| AclWI | GGATC | 2 cut(s) | 582, 607 |
| AfaI | GTAC | 1 cut(s) | 172 |
| AgsI | TTSAA | 3 cut(s) | 25, 53, 127 |
| AjiI | CACGTC | 1 cut(s) | 360 |
| AjnI | CCWGG | 1 cut(s) | 226 |
| AluBI | AGCT | 1 cut(s) | 623 |
| AluI | AGCT | 1 cut(s) | 623 |
| Alw21I | GWGCWC | 1 cut(s) | 187 |
| AlwI | GGATC | 2 cut(s) | 582, 607 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 227 |
| AoxI | GGCC | 1 cut(s) | 415 |
| ApeKI | GCWGC | 1 cut(s) | 443 |
| AspLEI | GCGC | 1 cut(s) | 470 |
| AspS9I | GGNCC | 1 cut(s) | 390 |
| AvaII | GGWCC | 1 cut(s) | 390 |
| BauI | CACGAG | 1 cut(s) | 93 |
| BbsI | GAAGAC | 1 cut(s) | 381 |
| Bbv12I | GWGCWC | 1 cut(s) | 187 |
| BbvI | GCAGC | 1 cut(s) | 430 |
| BccI | CCATC | 4 cut(s) | 206, 403, 482, 485 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 126, 160 |
| BciT130I | CCWGG | 1 cut(s) | 228 |
| BclI | TGATCA | 1 cut(s) | 453 |
| BfmI | CTRYAG | 1 cut(s) | 14 |
| BisI | GCNGC | 1 cut(s) | 444 |
| BlsI | GCNGC | 1 cut(s) | 445 |
| Bme1390I | CCNGG | 1 cut(s) | 228 |
| Bme18I | GGWCC | 1 cut(s) | 390 |
| BmgBI | CACGTC | 1 cut(s) | 360 |
| BmgT120I | GGNCC | 1 cut(s) | 390 |
| BmrFI | CCNGG | 1 cut(s) | 228 |
| BpiI | GAAGAC | 1 cut(s) | 381 |
| BsaWI | WCCGGW | 1 cut(s) | 535 |
| Bse1I | ACTGG | 1 cut(s) | 512 |
| BseBI | CCWGG | 1 cut(s) | 228 |
| BseMII | CTCAG | 1 cut(s) | 90 |
| BseNI | ACTGG | 1 cut(s) | 512 |
| BseRI | GAGGAG | 1 cut(s) | 64 |
| BseXI | GCAGC | 1 cut(s) | 430 |
| BshFI | GGCC | 1 cut(s) | 417 |
| BsiHKAI | GWGCWC | 1 cut(s) | 187 |
| BsiSI | CCGG | 1 cut(s) | 536 |
| BslFI | GGGAC | 2 cut(s) | 169, 363 |
| BsmFI | GGGAC | 2 cut(s) | 169, 363 |
| BsmI | GAATGC | 1 cut(s) | 215 |
| BsnI | GGCC | 1 cut(s) | 417 |
| Bsp1286I | GDGCHC | 1 cut(s) | 187 |
| Bsp1407I | TGTACA | 1 cut(s) | 170 |
| Bsp143I | GATC | 3 cut(s) | 453, 587, 599 |
| BspANI | GGCC | 1 cut(s) | 417 |
| BspCNI | CTCAG | 1 cut(s) | 89 |
| BspPI | GGATC | 2 cut(s) | 582, 607 |
| BsrGI | TGTACA | 1 cut(s) | 170 |
| BsrI | ACTGG | 1 cut(s) | 512 |
| BssMI | GATC | 3 cut(s) | 453, 587, 599 |
| BssSI | CACGAG | 1 cut(s) | 93 |
| Bst2BI | CACGAG | 1 cut(s) | 93 |
| Bst2UI | CCWGG | 1 cut(s) | 228 |
| Bst4CI | ACNGT | 4 cut(s) | 18, 83, 178, 223 |
| Bst6I | CTCTTC | 1 cut(s) | 135 |
| BstAUI | TGTACA | 1 cut(s) | 170 |
| BstC8I | GCNNGC | 1 cut(s) | 625 |
| BstDEI | CTNAG | 1 cut(s) | 76 |
| BstHHI | GCGC | 1 cut(s) | 470 |
| BstKTI | GATC | 3 cut(s) | 456, 590, 602 |
| BstMBI | GATC | 3 cut(s) | 453, 587, 599 |
| BstNI | CCWGG | 1 cut(s) | 228 |
| BstSCI | CCNGG | 1 cut(s) | 226 |
| BstSFI | CTRYAG | 1 cut(s) | 14 |
| BstV1I | GCAGC | 1 cut(s) | 430 |
| BstV2I | GAAGAC | 1 cut(s) | 381 |
| BstX2I | RGATCY | 2 cut(s) | 587, 599 |
| BstYI | RGATCY | 2 cut(s) | 587, 599 |
| BsuRI | GGCC | 1 cut(s) | 417 |
| BtrI | CACGTC | 1 cut(s) | 360 |
| BtsIMutI | CAGTG | 1 cut(s) | 23 |
| Cac8I | GCNNGC | 1 cut(s) | 625 |
| CaiI | CAGNNNCTG | 1 cut(s) | 227 |
| CfoI | GCGC | 1 cut(s) | 470 |
| Cfr13I | GGNCC | 1 cut(s) | 390 |
| Csp6I | GTAC | 1 cut(s) | 171 |
| CviAII | CATG | 6 cut(s) | 59, 202, 265, 448, 481, 607 |
| CviJI | RGCY | 2 cut(s) | 417, 623 |
| CviKI_1 | RGCY | 2 cut(s) | 417, 623 |
| CviQI | GTAC | 1 cut(s) | 171 |
| DdeI | CTNAG | 1 cut(s) | 76 |
| DpnI | GATC | 3 cut(s) | 455, 589, 601 |
| DpnII | GATC | 3 cut(s) | 453, 587, 599 |
| Eam1104I | CTCTTC | 1 cut(s) | 135 |
| EarI | CTCTTC | 1 cut(s) | 135 |
| Eco47I | GGWCC | 1 cut(s) | 390 |
| EcoRII | CCWGG | 1 cut(s) | 226 |
| EcoT22I | ATGCAT | 1 cut(s) | 270 |
| FaeI | CATG | 6 cut(s) | 62, 205, 268, 451, 484, 610 |
| FaqI | GGGAC | 2 cut(s) | 169, 363 |
| FatI | CATG | 6 cut(s) | 58, 201, 264, 447, 480, 606 |
| FbaI | TGATCA | 1 cut(s) | 453 |
| FblI | GTMKAC | 1 cut(s) | 253 |
| Fnu4HI | GCNGC | 1 cut(s) | 444 |
| Fsp4HI | GCNGC | 1 cut(s) | 444 |
| GlaI | GCGC | 1 cut(s) | 469 |
| GluI | GCNGC | 1 cut(s) | 444 |
| HaeIII | GGCC | 1 cut(s) | 417 |
| HapII | CCGG | 1 cut(s) | 536 |
| HhaI | GCGC | 1 cut(s) | 470 |
| Hin1II | CATG | 6 cut(s) | 62, 205, 268, 451, 484, 610 |
| Hin6I | GCGC | 1 cut(s) | 468 |
| HinP1I | GCGC | 1 cut(s) | 468 |
| HincII | GTYRAC | 1 cut(s) | 363 |
| HindII | GTYRAC | 1 cut(s) | 363 |
| HinfI | GANTC | 2 cut(s) | 112, 143 |
| HpaII | CCGG | 1 cut(s) | 536 |
| Hpy166II | GTNNAC | 2 cut(s) | 254, 363 |
| Hpy188I | TCNGA | 4 cut(s) | 79, 284, 301, 615 |
| Hpy8I | GTNNAC | 2 cut(s) | 254, 363 |
| HpyCH4III | ACNGT | 4 cut(s) | 18, 83, 178, 223 |
| HpyCH4IV | ACGT | 2 cut(s) | 359, 458 |
| HpyCH4V | TGCA | 8 cut(s) | 4, 161, 209, 268, 371, 527, 551, 585 |
| HpyF3I | CTNAG | 1 cut(s) | 76 |
| HpySE526I | ACGT | 2 cut(s) | 359, 458 |
| Hsp92II | CATG | 6 cut(s) | 62, 205, 268, 451, 484, 610 |
| HspAI | GCGC | 1 cut(s) | 468 |
| Ksp22I | TGATCA | 1 cut(s) | 453 |
| Kzo9I | GATC | 3 cut(s) | 453, 587, 599 |
| LpnPI | CCDG | 6 cut(s) | 213, 234, 240, 525, 549, 609 |
| Lsp1109I | GCAGC | 1 cut(s) | 430 |
| MaeII | ACGT | 2 cut(s) | 359, 458 |
| MaeIII | GTNAC | 1 cut(s) | 193 |
| MalI | GATC | 3 cut(s) | 455, 589, 601 |
| MboI | GATC | 3 cut(s) | 453, 587, 599 |
| MboII | GAAGA | 5 cut(s) | 139, 152, 386, 594, 628 |
| MflI | RGATCY | 2 cut(s) | 587, 599 |
| MhlI | GDGCHC | 1 cut(s) | 187 |
| MluCI | AATT | 4 cut(s) | 98, 122, 336, 507 |
| MlyI | GAGTC | 1 cut(s) | 152 |
| MnlI | CCTC | 5 cut(s) | 22, 85, 127, 331, 578 |
| Mph1103I | ATGCAT | 1 cut(s) | 270 |
| MseI | TTAA | 2 cut(s) | 69, 631 |
| MspI | CCGG | 1 cut(s) | 536 |
| MspR9I | CCNGG | 1 cut(s) | 228 |
| Mva1269I | GAATGC | 1 cut(s) | 215 |
| MvaI | CCWGG | 1 cut(s) | 228 |
| NdeII | GATC | 3 cut(s) | 453, 587, 599 |
| NlaIII | CATG | 6 cut(s) | 62, 205, 268, 451, 484, 610 |
| NsiI | ATGCAT | 1 cut(s) | 270 |
| PctI | GAATGC | 1 cut(s) | 215 |
| PfeI | GAWTC | 1 cut(s) | 112 |
| PkrI | GCNGC | 1 cut(s) | 445 |
| PleI | GAGTC | 1 cut(s) | 151 |
| PpsI | GAGTC | 1 cut(s) | 151 |
| Psp6I | CCWGG | 1 cut(s) | 226 |
| PspGI | CCWGG | 1 cut(s) | 226 |
| PspPI | GGNCC | 1 cut(s) | 390 |
| PstNI | CAGNNNCTG | 1 cut(s) | 227 |
| PsuI | RGATCY | 2 cut(s) | 587, 599 |
| RsaI | GTAC | 1 cut(s) | 172 |
| RsaNI | GTAC | 1 cut(s) | 171 |
| SaqAI | TTAA | 2 cut(s) | 69, 631 |
| SatI | GCNGC | 1 cut(s) | 444 |
| Sau3AI | GATC | 3 cut(s) | 453, 587, 599 |
| Sau96I | GGNCC | 1 cut(s) | 390 |
| SchI | GAGTC | 1 cut(s) | 152 |
| ScrFI | CCNGG | 1 cut(s) | 228 |
| SduI | GDGCHC | 1 cut(s) | 187 |
| SetI | ASST | 5 cut(s) | 33, 253, 362, 461, 625 |
| SfcI | CTRYAG | 1 cut(s) | 14 |
| SinI | GGWCC | 1 cut(s) | 390 |
| Sse9I | AATT | 4 cut(s) | 98, 122, 336, 507 |
| StyD4I | CCNGG | 1 cut(s) | 226 |
| TaaI | ACNGT | 4 cut(s) | 18, 83, 178, 223 |
| TaiI | ACGT | 2 cut(s) | 362, 461 |
| TaqI | TCGA | 1 cut(s) | 146 |
| TasI | AATT | 4 cut(s) | 98, 122, 336, 507 |
| TatI | WGTACW | 1 cut(s) | 170 |
| TfiI | GAWTC | 1 cut(s) | 112 |
| Tru1I | TTAA | 2 cut(s) | 69, 631 |
| Tru9I | TTAA | 2 cut(s) | 69, 631 |
| TscAI | CASTG | 1 cut(s) | 23 |
| TseI | GCWGC | 1 cut(s) | 443 |
| TspDTI | ATGAA | 5 cut(s) | 75, 164, 253, 280, 421 |
| TspRI | CASTG | 1 cut(s) | 23 |
| VpaK11BI | GGWCC | 1 cut(s) | 390 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 406 |
| XmiI | GTMKAC | 1 cut(s) | 253 |
| Zsp2I | ATGCAT | 1 cut(s) | 270 |