protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 354 |
| AciI | CCGC | 2 cut(s) | 216, 376 |
| AcuI | CTGAAG | 1 cut(s) | 171 |
| AgsI | TTSAA | 2 cut(s) | 25, 292 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 272, 304 |
| AluBI | AGCT | 3 cut(s) | 75, 155, 295 |
| AluI | AGCT | 3 cut(s) | 75, 155, 295 |
| Alw21I | GWGCWC | 1 cut(s) | 77 |
| Alw26I | GTCTC | 1 cut(s) | 305 |
| Ama87I | CYCGRG | 1 cut(s) | 78 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 287 |
| AsuHPI | GGTGA | 2 cut(s) | 133, 353 |
| AvaI | CYCGRG | 1 cut(s) | 78 |
| BanII | GRGCYC | 1 cut(s) | 77 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 318, 350 |
| BbsI | GAAGAC | 2 cut(s) | 72, 111 |
| Bbv12I | GWGCWC | 1 cut(s) | 77 |
| BceAI | ACGGC | 1 cut(s) | 344 |
| BcoDI | GTCTC | 1 cut(s) | 305 |
| BfuAI | ACCTGC | 1 cut(s) | 354 |
| BmeT110I | CYCGRG | 1 cut(s) | 78 |
| BmiI | GGNNCC | 1 cut(s) | 358 |
| BpiI | GAAGAC | 2 cut(s) | 72, 111 |
| BpmI | CTGGAG | 1 cut(s) | 91 |
| BpuEI | CTTGAG | 1 cut(s) | 287 |
| BsaJI | CCNNGG | 2 cut(s) | 186, 258 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 272, 302 |
| Bse1I | ACTGG | 1 cut(s) | 74 |
| BseDI | CCNNGG | 2 cut(s) | 186, 258 |
| BseGI | GGATG | 3 cut(s) | 121, 133, 177 |
| BseMII | CTCAG | 1 cut(s) | 213 |
| BseNI | ACTGG | 1 cut(s) | 74 |
| BsiHKAI | GWGCWC | 1 cut(s) | 77 |
| BsiHKCI | CYCGRG | 1 cut(s) | 78 |
| BslFI | GGGAC | 1 cut(s) | 232 |
| BsmAI | GTCTC | 1 cut(s) | 305 |
| BsmBI | CGTCTC | 1 cut(s) | 305 |
| BsmFI | GGGAC | 1 cut(s) | 232 |
| BsmI | GAATGC | 1 cut(s) | 187 |
| BsoBI | CYCGRG | 1 cut(s) | 78 |
| Bsp1286I | GDGCHC | 1 cut(s) | 77 |
| Bsp19I | CCATGG | 1 cut(s) | 258 |
| BspACI | CCGC | 2 cut(s) | 216, 376 |
| BspCNI | CTCAG | 1 cut(s) | 214 |
| BspLI | GGNNCC | 1 cut(s) | 358 |
| BspMI | ACCTGC | 1 cut(s) | 354 |
| BsrI | ACTGG | 1 cut(s) | 74 |
| BssECI | CCNNGG | 2 cut(s) | 186, 258 |
| BssT1I | CCWWGG | 2 cut(s) | 186, 258 |
| Bst4CI | ACNGT | 2 cut(s) | 16, 341 |
| BstDEI | CTNAG | 1 cut(s) | 222 |
| BstDSI | CCRYGG | 1 cut(s) | 258 |
| BstEII | GGTNACC | 1 cut(s) | 341 |
| BstF5I | GGATG | 3 cut(s) | 121, 133, 177 |
| BstMAI | GTCTC | 1 cut(s) | 305 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 197, 263 |
| BstNSI | RCATGY | 1 cut(s) | 200 |
| BstPI | GGTNACC | 1 cut(s) | 341 |
| BstV2I | GAAGAC | 2 cut(s) | 72, 111 |
| BtgI | CCRYGG | 1 cut(s) | 258 |
| BtsCI | GGATG | 3 cut(s) | 121, 133, 177 |
| BveI | ACCTGC | 1 cut(s) | 354 |
| CviAII | CATG | 3 cut(s) | 197, 259, 267 |
| CviJI | RGCY | 6 cut(s) | 75, 155, 191, 257, 295, 359 |
| CviKI_1 | RGCY | 6 cut(s) | 75, 155, 191, 257, 295, 359 |
| DdeI | CTNAG | 1 cut(s) | 222 |
| Ecl136II | GAGCTC | 1 cut(s) | 75 |
| Eco130I | CCWWGG | 2 cut(s) | 186, 258 |
| Eco24I | GRGCYC | 1 cut(s) | 77 |
| Eco53kI | GAGCTC | 1 cut(s) | 75 |
| Eco57I | CTGAAG | 1 cut(s) | 171 |
| Eco88I | CYCGRG | 1 cut(s) | 78 |
| Eco91I | GGTNACC | 1 cut(s) | 341 |
| EcoICRI | GAGCTC | 1 cut(s) | 75 |
| EcoO65I | GGTNACC | 1 cut(s) | 341 |
| EcoT14I | CCWWGG | 2 cut(s) | 186, 258 |
| EcoT38I | GRGCYC | 1 cut(s) | 77 |
| ErhI | CCWWGG | 2 cut(s) | 186, 258 |
| Esp3I | CGTCTC | 1 cut(s) | 305 |
| FaeI | CATG | 3 cut(s) | 200, 262, 270 |
| FaiI | YATR | 8 cut(s) | 57, 63, 91, 140, 198, 260, 268, 354 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 77, 109 |
| FaqI | GGGAC | 1 cut(s) | 232 |
| FatI | CATG | 3 cut(s) | 196, 258, 266 |
| FauI | CCCGC | 1 cut(s) | 209 |
| FokI | GGATG | 3 cut(s) | 120, 128, 184 |
| FriOI | GRGCYC | 1 cut(s) | 77 |
| GsuI | CTGGAG | 1 cut(s) | 91 |
| Hin1II | CATG | 3 cut(s) | 200, 262, 270 |
| HphI | GGTGA | 2 cut(s) | 133, 353 |
| Hpy188I | TCNGA | 1 cut(s) | 310 |
| Hpy188III | TCNNGA | 3 cut(s) | 38, 85, 364 |
| Hpy99I | CGWCG | 1 cut(s) | 365 |
| HpyAV | CCTTC | 1 cut(s) | 31 |
| HpyCH4III | ACNGT | 2 cut(s) | 16, 341 |
| HpyCH4IV | ACGT | 1 cut(s) | 298 |
| HpyCH4V | TGCA | 1 cut(s) | 29 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 197, 263 |
| HpyF3I | CTNAG | 1 cut(s) | 222 |
| HpySE526I | ACGT | 1 cut(s) | 298 |
| Hsp92II | CATG | 3 cut(s) | 200, 262, 270 |
| LmnI | GCTCC | 2 cut(s) | 72, 356 |
| LpnPI | CCDG | 2 cut(s) | 55, 359 |
| MaeII | ACGT | 1 cut(s) | 298 |
| MaeIII | GTNAC | 2 cut(s) | 16, 341 |
| MboII | GAAGA | 5 cut(s) | 77, 116, 187, 190, 329 |
| MfeI | CAATTG | 1 cut(s) | 30 |
| MhlI | GDGCHC | 1 cut(s) | 77 |
| MluCI | AATT | 2 cut(s) | 30, 58 |
| MnlI | CCTC | 1 cut(s) | 265 |
| MroXI | GAANNNNTTC | 1 cut(s) | 287 |
| MseI | TTAA | 2 cut(s) | 48, 204 |
| MslI | CAYNNNNRTG | 2 cut(s) | 60, 257 |
| MunI | CAATTG | 1 cut(s) | 30 |
| Mva1269I | GAATGC | 1 cut(s) | 187 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 197, 263 |
| NcoI | CCATGG | 1 cut(s) | 258 |
| NlaIII | CATG | 3 cut(s) | 200, 262, 270 |
| NlaIV | GGNNCC | 1 cut(s) | 358 |
| NmuCI | GTSAC | 1 cut(s) | 341 |
| NspI | RCATGY | 1 cut(s) | 200 |
| PctI | GAATGC | 1 cut(s) | 187 |
| PdmI | GAANNNNTTC | 1 cut(s) | 287 |
| Psp124BI | GAGCTC | 1 cut(s) | 77 |
| PspEI | GGTNACC | 1 cut(s) | 341 |
| PspN4I | GGNNCC | 1 cut(s) | 358 |
| RseI | CAYNNNNRTG | 2 cut(s) | 60, 257 |
| SacI | GAGCTC | 1 cut(s) | 77 |
| SaqAI | TTAA | 2 cut(s) | 48, 204 |
| SduI | GDGCHC | 1 cut(s) | 77 |
| SetI | ASST | 8 cut(s) | 23, 77, 111, 157, 276, 297, 301, 348 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 60, 257 |
| SmlI | CTYRAG | 1 cut(s) | 302 |
| SmoI | CTYRAG | 1 cut(s) | 302 |
| Sse9I | AATT | 2 cut(s) | 30, 58 |
| SsiI | CCGC | 2 cut(s) | 216, 376 |
| SspI | AATATT | 1 cut(s) | 333 |
| SstI | GAGCTC | 1 cut(s) | 77 |
| StyI | CCWWGG | 2 cut(s) | 186, 258 |
| TaaI | ACNGT | 2 cut(s) | 16, 341 |
| TaiI | ACGT | 1 cut(s) | 301 |
| TaqI | TCGA | 1 cut(s) | 363 |
| TasI | AATT | 2 cut(s) | 30, 58 |
| Tru1I | TTAA | 2 cut(s) | 48, 204 |
| Tru9I | TTAA | 2 cut(s) | 48, 204 |
| TseFI | GTSAC | 1 cut(s) | 341 |
| Tsp45I | GTSAC | 1 cut(s) | 341 |
| TspDTI | ATGAA | 2 cut(s) | 78, 188 |
| TspGWI | ACGGA | 1 cut(s) | 230 |
| XceI | RCATGY | 1 cut(s) | 200 |
| XmnI | GAANNNNTTC | 1 cut(s) | 287 |