protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 912, 1523 |
| Acc65I | GGTACC | 1 cut(s) | 396 |
| AccB1I | GGYRCC | 1 cut(s) | 396 |
| AciI | CCGC | 3 cut(s) | 1085, 1299, 1371 |
| AclI | AACGTT | 3 cut(s) | 1376, 1382, 1669 |
| AclWI | GGATC | 3 cut(s) | 641, 744, 935 |
| AcsI | RAATTY | 4 cut(s) | 488, 1392, 1601, 1649 |
| AcuI | CTGAAG | 2 cut(s) | 821, 1323 |
| AfaI | GTAC | 3 cut(s) | 398, 1070, 1092 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 131, 529 |
| AgsI | TTSAA | 6 cut(s) | 267, 343, 422, 494, 515, 1569 |
| AjnI | CCWGG | 4 cut(s) | 164, 1030, 1270, 1538 |
| AluBI | AGCT | 8 cut(s) | 59, 251, 365, 745, 779, 953, 1040, 1337 |
| AluI | AGCT | 8 cut(s) | 59, 251, 365, 745, 779, 953, 1040, 1337 |
| Alw21I | GWGCWC | 3 cut(s) | 610, 755, 1231 |
| Alw26I | GTCTC | 2 cut(s) | 396, 1193 |
| AlwI | GGATC | 3 cut(s) | 641, 744, 935 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 748, 1271 |
| ApeKI | GCWGC | 5 cut(s) | 745, 1037, 1051, 1253, 1256 |
| ApoI | RAATTY | 4 cut(s) | 488, 1392, 1601, 1649 |
| Asp718I | GGTACC | 1 cut(s) | 396 |
| AspLEI | GCGC | 1 cut(s) | 455 |
| AspS9I | GGNCC | 3 cut(s) | 443, 544, 684 |
| AsuHPI | GGTGA | 4 cut(s) | 74, 193, 205, 1193 |
| AvaII | GGWCC | 3 cut(s) | 443, 544, 684 |
| BaeGI | GKGCMC | 1 cut(s) | 524 |
| BanI | GGYRCC | 1 cut(s) | 396 |
| BbsI | GAAGAC | 1 cut(s) | 1422 |
| Bbv12I | GWGCWC | 3 cut(s) | 610, 755, 1231 |
| BbvI | GCAGC | 5 cut(s) | 732, 1049, 1063, 1240, 1243 |
| BccI | CCATC | 2 cut(s) | 196, 1591 |
| BceAI | ACGGC | 4 cut(s) | 156, 391, 869, 1218 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 374, 408, 633, 667 |
| BciT130I | CCWGG | 4 cut(s) | 166, 1032, 1272, 1540 |
| BcoDI | GTCTC | 2 cut(s) | 396, 1193 |
| BfaI | CTAG | 1 cut(s) | 1613 |
| BfmI | CTRYAG | 1 cut(s) | 1172 |
| BfoI | RGCGCY | 1 cut(s) | 456 |
| BglII | AGATCT | 1 cut(s) | 1141 |
| BisI | GCNGC | 5 cut(s) | 746, 1038, 1052, 1254, 1257 |
| BlpI | GCTNAGC | 1 cut(s) | 749 |
| BlsI | GCNGC | 5 cut(s) | 747, 1039, 1053, 1255, 1258 |
| Bme1390I | CCNGG | 4 cut(s) | 166, 1032, 1272, 1540 |
| Bme18I | GGWCC | 3 cut(s) | 443, 544, 684 |
| BmgT120I | GGNCC | 3 cut(s) | 443, 544, 684 |
| BmiI | GGNNCC | 3 cut(s) | 398, 445, 686 |
| BmrFI | CCNGG | 4 cut(s) | 166, 1032, 1272, 1540 |
| BmrI | ACTGGG | 1 cut(s) | 441 |
| BmsI | GCATC | 7 cut(s) | 37, 106, 151, 488, 663, 1038, 1333 |
| BmuI | ACTGGG | 1 cut(s) | 441 |
| BpiI | GAAGAC | 1 cut(s) | 1422 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 597, 629 |
| BpmI | CTGGAG | 1 cut(s) | 1293 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 749 |
| BsaWI | WCCGGW | 4 cut(s) | 131, 415, 681, 1552 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 389, 419 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 131, 529 |
| Bse118I | RCCGGY | 1 cut(s) | 1289 |
| Bse1I | ACTGG | 5 cut(s) | 195, 447, 947, 1464, 1577 |
| Bse3DI | GCAATG | 1 cut(s) | 774 |
| BseBI | CCWGG | 4 cut(s) | 166, 1032, 1272, 1540 |
| BseGI | GGATG | 6 cut(s) | 97, 121, 211, 479, 1197, 1602 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 131, 529 |
| BseMI | GCAATG | 1 cut(s) | 774 |
| BseMII | CTCAG | 1 cut(s) | 740 |
| BseNI | ACTGG | 5 cut(s) | 195, 447, 947, 1464, 1577 |
| BseSI | GKGCMC | 1 cut(s) | 524 |
| BseXI | GCAGC | 5 cut(s) | 732, 1049, 1063, 1240, 1243 |
| BsgI | GTGCAG | 1 cut(s) | 1056 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1371 |
| BshNI | GGYRCC | 1 cut(s) | 396 |
| BsiEI | CGRYCG | 1 cut(s) | 1371 |
| BsiHKAI | GWGCWC | 3 cut(s) | 610, 755, 1231 |
| BsiSI | CCGG | 5 cut(s) | 132, 416, 682, 1290, 1553 |
| BslFI | GGGAC | 1 cut(s) | 670 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 131, 529 |
| BsmAI | GTCTC | 2 cut(s) | 396, 1193 |
| BsmBI | CGTCTC | 1 cut(s) | 1193 |
| BsmFI | GGGAC | 1 cut(s) | 670 |
| BsmI | GAATGC | 2 cut(s) | 299, 1301 |
| Bsp1286I | GDGCHC | 4 cut(s) | 524, 610, 755, 1231 |
| Bsp143I | GATC | 5 cut(s) | 633, 663, 736, 927, 1141 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 749 |
| BspACI | CCGC | 3 cut(s) | 1085, 1299, 1371 |
| BspCNI | CTCAG | 1 cut(s) | 741 |
| BspLI | GGNNCC | 3 cut(s) | 398, 445, 686 |
| BspPI | GGATC | 3 cut(s) | 641, 744, 935 |
| BspQI | GCTCTTC | 1 cut(s) | 150 |
| BspT107I | GGYRCC | 1 cut(s) | 396 |
| BsrDI | GCAATG | 1 cut(s) | 774 |
| BsrFI | RCCGGY | 1 cut(s) | 1289 |
| BsrI | ACTGG | 5 cut(s) | 195, 447, 947, 1464, 1577 |
| BssAI | RCCGGY | 1 cut(s) | 1289 |
| BssMI | GATC | 5 cut(s) | 633, 663, 736, 927, 1141 |
| Bst2UI | CCWGG | 4 cut(s) | 166, 1032, 1272, 1540 |
| Bst4CI | ACNGT | 8 cut(s) | 235, 519, 673, 757, 1219, 1267, 1627, 1640 |
| Bst6I | CTCTTC | 1 cut(s) | 150 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 161 |
| BstC8I | GCNNGC | 4 cut(s) | 994, 998, 1002, 1461 |
| BstDEI | CTNAG | 2 cut(s) | 749, 810 |
| BstF5I | GGATG | 6 cut(s) | 97, 121, 211, 479, 1197, 1602 |
| BstH2I | RGCGCY | 1 cut(s) | 456 |
| BstHHI | GCGC | 1 cut(s) | 455 |
| BstKTI | GATC | 5 cut(s) | 636, 666, 739, 930, 1144 |
| BstMAI | GTCTC | 2 cut(s) | 396, 1193 |
| BstMBI | GATC | 5 cut(s) | 633, 663, 736, 927, 1141 |
| BstMCI | CGRYCG | 1 cut(s) | 1371 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 56, 113, 161, 1051, 1343 |
| BstNI | CCWGG | 4 cut(s) | 166, 1032, 1272, 1540 |
| BstNSI | RCATGY | 1 cut(s) | 982 |
| BstSCI | CCNGG | 4 cut(s) | 164, 1030, 1270, 1538 |
| BstSFI | CTRYAG | 1 cut(s) | 1172 |
| BstSLI | GKGCMC | 1 cut(s) | 524 |
| BstV1I | GCAGC | 5 cut(s) | 732, 1049, 1063, 1240, 1243 |
| BstV2I | GAAGAC | 1 cut(s) | 1422 |
| BstX2I | RGATCY | 3 cut(s) | 633, 927, 1141 |
| BstYI | RGATCY | 3 cut(s) | 633, 927, 1141 |
| BtsCI | GGATG | 6 cut(s) | 97, 121, 211, 479, 1197, 1602 |
| BtsIMutI | CAGTG | 2 cut(s) | 454, 753 |
| Cac8I | GCNNGC | 4 cut(s) | 994, 998, 1002, 1461 |
| CaiI | CAGNNNCTG | 2 cut(s) | 748, 1271 |
| CfoI | GCGC | 1 cut(s) | 455 |
| Cfr10I | RCCGGY | 1 cut(s) | 1289 |
| Cfr13I | GGNCC | 3 cut(s) | 443, 544, 684 |
| Csp6I | GTAC | 3 cut(s) | 397, 1069, 1091 |
| CviQI | GTAC | 3 cut(s) | 397, 1069, 1091 |
| DdeI | CTNAG | 2 cut(s) | 749, 810 |
| DpnI | GATC | 5 cut(s) | 635, 665, 738, 929, 1143 |
| DpnII | GATC | 5 cut(s) | 633, 663, 736, 927, 1141 |
| Eam1104I | CTCTTC | 1 cut(s) | 150 |
| EarI | CTCTTC | 1 cut(s) | 150 |
| Eco47I | GGWCC | 3 cut(s) | 443, 544, 684 |
| Eco57I | CTGAAG | 2 cut(s) | 821, 1323 |
| EcoRI | GAATTC | 2 cut(s) | 1392, 1601 |
| EcoRII | CCWGG | 4 cut(s) | 164, 1030, 1270, 1538 |
| EcoT22I | ATGCAT | 1 cut(s) | 299 |
| Esp3I | CGTCTC | 1 cut(s) | 1193 |
| FaqI | GGGAC | 1 cut(s) | 670 |
| FauI | CCCGC | 1 cut(s) | 1306 |
| FauNDI | CATATG | 2 cut(s) | 387, 987 |
| Fnu4HI | GCNGC | 5 cut(s) | 746, 1038, 1052, 1254, 1257 |
| FokI | GGATG | 6 cut(s) | 84, 108, 218, 466, 1204, 1609 |
| Fsp4HI | GCNGC | 5 cut(s) | 746, 1038, 1052, 1254, 1257 |
| FspBI | CTAG | 1 cut(s) | 1613 |
| GlaI | GCGC | 1 cut(s) | 454 |
| GluI | GCNGC | 5 cut(s) | 746, 1038, 1052, 1254, 1257 |
| GsuI | CTGGAG | 1 cut(s) | 1293 |
| HaeII | RGCGCY | 1 cut(s) | 456 |
| HapII | CCGG | 5 cut(s) | 132, 416, 682, 1290, 1553 |
| HhaI | GCGC | 1 cut(s) | 455 |
| Hin6I | GCGC | 1 cut(s) | 453 |
| HinP1I | GCGC | 1 cut(s) | 453 |
| HincII | GTYRAC | 1 cut(s) | 1380 |
| HindII | GTYRAC | 1 cut(s) | 1380 |
| HinfI | GANTC | 6 cut(s) | 349, 554, 645, 1109, 1156, 1549 |
| HpaI | GTTAAC | 1 cut(s) | 1380 |
| HpaII | CCGG | 5 cut(s) | 132, 416, 682, 1290, 1553 |
| HphI | GGTGA | 4 cut(s) | 74, 193, 205, 1193 |
| Hpy166II | GTNNAC | 3 cut(s) | 1058, 1380, 1532 |
| Hpy188I | TCNGA | 5 cut(s) | 16, 362, 409, 776, 1342 |
| Hpy188III | TCNNGA | 7 cut(s) | 101, 598, 830, 847, 899, 1106, 1426 |
| Hpy8I | GTNNAC | 3 cut(s) | 1058, 1380, 1532 |
| Hpy99I | CGWCG | 1 cut(s) | 800 |
| HpyAV | CCTTC | 3 cut(s) | 597, 1189, 1523 |
| HpyCH4III | ACNGT | 8 cut(s) | 235, 519, 673, 757, 1219, 1267, 1627, 1640 |
| HpyCH4IV | ACGT | 5 cut(s) | 795, 1376, 1382, 1405, 1669 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 56, 113, 161, 1051, 1343 |
| HpyF3I | CTNAG | 2 cut(s) | 749, 810 |
| HpySE526I | ACGT | 5 cut(s) | 795, 1376, 1382, 1405, 1669 |
| HspAI | GCGC | 1 cut(s) | 453 |
| KpnI | GGTACC | 1 cut(s) | 400 |
| KspAI | GTTAAC | 1 cut(s) | 1380 |
| Kzo9I | GATC | 5 cut(s) | 633, 663, 736, 927, 1141 |
| LguI | GCTCTTC | 1 cut(s) | 150 |
| LmnI | GCTCC | 2 cut(s) | 605, 777 |
| Lsp1109I | GCAGC | 5 cut(s) | 732, 1049, 1063, 1240, 1243 |
| LweI | GCATC | 7 cut(s) | 37, 106, 151, 488, 663, 1038, 1333 |
| MaeI | CTAG | 1 cut(s) | 1613 |
| MaeII | ACGT | 5 cut(s) | 795, 1376, 1382, 1405, 1669 |
| MaeIII | GTNAC | 2 cut(s) | 244, 1579 |
| MalI | GATC | 5 cut(s) | 635, 665, 738, 929, 1143 |
| MboI | GATC | 5 cut(s) | 633, 663, 736, 927, 1141 |
| MboII | GAAGA | 4 cut(s) | 137, 582, 1353, 1427 |
| MflI | RGATCY | 3 cut(s) | 633, 927, 1141 |
| MhlI | GDGCHC | 4 cut(s) | 524, 610, 755, 1231 |
| MlyI | GAGTC | 3 cut(s) | 548, 1103, 1165 |
| MmeI | TCCRAC | 1 cut(s) | 708 |
| MnlI | CCTC | 7 cut(s) | 97, 410, 1069, 1075, 1104, 1268, 1619 |
| Mph1103I | ATGCAT | 1 cut(s) | 299 |
| MseI | TTAA | 4 cut(s) | 509, 1020, 1379, 1653 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1445 |
| MspA1I | CMGCKG | 1 cut(s) | 745 |
| MspI | CCGG | 5 cut(s) | 132, 416, 682, 1290, 1553 |
| MspR9I | CCNGG | 4 cut(s) | 166, 1032, 1272, 1540 |
| Mva1269I | GAATGC | 2 cut(s) | 299, 1301 |
| MvaI | CCWGG | 4 cut(s) | 166, 1032, 1272, 1540 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 56, 113, 161, 1051, 1343 |
| NdeI | CATATG | 2 cut(s) | 387, 987 |
| NdeII | GATC | 5 cut(s) | 633, 663, 736, 927, 1141 |
| NlaIV | GGNNCC | 3 cut(s) | 398, 445, 686 |
| NmuCI | GTSAC | 1 cut(s) | 1579 |
| NsiI | ATGCAT | 1 cut(s) | 299 |
| NspI | RCATGY | 1 cut(s) | 982 |
| PciSI | GCTCTTC | 1 cut(s) | 150 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1373 |
| PctI | GAATGC | 2 cut(s) | 299, 1301 |
| PfeI | GAWTC | 3 cut(s) | 349, 645, 1549 |
| PfoI | TCCNGGA | 2 cut(s) | 1270, 1538 |
| PkrI | GCNGC | 5 cut(s) | 747, 1039, 1053, 1255, 1258 |
| PleI | GAGTC | 3 cut(s) | 548, 1103, 1164 |
| PpsI | GAGTC | 3 cut(s) | 548, 1103, 1164 |
| PsiI | TTATAA | 2 cut(s) | 912, 1523 |
| Psp1406I | AACGTT | 3 cut(s) | 1376, 1382, 1669 |
| Psp6I | CCWGG | 4 cut(s) | 164, 1030, 1270, 1538 |
| PspGI | CCWGG | 4 cut(s) | 164, 1030, 1270, 1538 |
| PspN4I | GGNNCC | 3 cut(s) | 398, 445, 686 |
| PspPI | GGNCC | 3 cut(s) | 443, 544, 684 |
| PstNI | CAGNNNCTG | 2 cut(s) | 748, 1271 |
| PsuI | RGATCY | 3 cut(s) | 633, 927, 1141 |
| PvuII | CAGCTG | 1 cut(s) | 745 |
| RsaI | GTAC | 3 cut(s) | 398, 1070, 1092 |
| RsaNI | GTAC | 3 cut(s) | 397, 1069, 1091 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1445 |
| SapI | GCTCTTC | 1 cut(s) | 150 |
| SaqAI | TTAA | 4 cut(s) | 509, 1020, 1379, 1653 |
| SatI | GCNGC | 5 cut(s) | 746, 1038, 1052, 1254, 1257 |
| Sau3AI | GATC | 5 cut(s) | 633, 663, 736, 927, 1141 |
| Sau96I | GGNCC | 3 cut(s) | 443, 544, 684 |
| SchI | GAGTC | 3 cut(s) | 548, 1103, 1165 |
| ScrFI | CCNGG | 4 cut(s) | 166, 1032, 1272, 1540 |
| SduI | GDGCHC | 4 cut(s) | 524, 610, 755, 1231 |
| SfaNI | GCATC | 7 cut(s) | 37, 106, 151, 488, 663, 1038, 1333 |
| SfcI | CTRYAG | 1 cut(s) | 1172 |
| SinI | GGWCC | 3 cut(s) | 443, 544, 684 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1445 |
| SsiI | CCGC | 3 cut(s) | 1085, 1299, 1371 |
| SspI | AATATT | 1 cut(s) | 425 |
| SspMI | CTAG | 1 cut(s) | 1613 |
| StyD4I | CCNGG | 4 cut(s) | 164, 1030, 1270, 1538 |
| TaaI | ACNGT | 8 cut(s) | 235, 519, 673, 757, 1219, 1267, 1627, 1640 |
| TaiI | ACGT | 5 cut(s) | 798, 1379, 1385, 1408, 1672 |
| TaqI | TCGA | 2 cut(s) | 230, 798 |
| TaqII | GACCGA | 1 cut(s) | 657 |
| TfiI | GAWTC | 3 cut(s) | 349, 645, 1549 |
| Tru1I | TTAA | 4 cut(s) | 509, 1020, 1379, 1653 |
| Tru9I | TTAA | 4 cut(s) | 509, 1020, 1379, 1653 |
| TscAI | CASTG | 2 cut(s) | 454, 760 |
| TseFI | GTSAC | 1 cut(s) | 1579 |
| TseI | GCWGC | 5 cut(s) | 745, 1037, 1051, 1253, 1256 |
| Tsp45I | GTSAC | 1 cut(s) | 1579 |
| TspDTI | ATGAA | 9 cut(s) | 33, 48, 327, 582, 870, 937, 1208, 1294, 1326 |
| TspGWI | ACGGA | 3 cut(s) | 114, 456, 557 |
| TspRI | CASTG | 2 cut(s) | 454, 760 |
| VpaK11BI | GGWCC | 3 cut(s) | 443, 544, 684 |
| XapI | RAATTY | 4 cut(s) | 488, 1392, 1601, 1649 |
| XceI | RCATGY | 1 cut(s) | 982 |
| XspI | CTAG | 1 cut(s) | 1613 |
| Zsp2I | ATGCAT | 1 cut(s) | 299 |