protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 41 - 153 | 1.4e-25 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 203 |
| AciI | CCGC | 1 cut(s) | 201 |
| AcsI | RAATTY | 1 cut(s) | 478 |
| AcvI | CACGTG | 1 cut(s) | 74 |
| AdeI | CACNNNGTG | 1 cut(s) | 74 |
| AfaI | GTAC | 2 cut(s) | 27, 151 |
| AgsI | TTSAA | 1 cut(s) | 35 |
| AjnI | CCWGG | 3 cut(s) | 205, 586, 614 |
| AluBI | AGCT | 2 cut(s) | 79, 161 |
| AluI | AGCT | 2 cut(s) | 79, 161 |
| Alw21I | GWGCWC | 1 cut(s) | 81 |
| Alw26I | GTCTC | 1 cut(s) | 128 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 615 |
| ApeKI | GCWGC | 2 cut(s) | 161, 446 |
| ApoI | RAATTY | 1 cut(s) | 478 |
| AseI | ATTAAT | 1 cut(s) | 104 |
| AspS9I | GGNCC | 1 cut(s) | 584 |
| AsuHPI | GGTGA | 3 cut(s) | 190, 479, 517 |
| AvaII | GGWCC | 1 cut(s) | 584 |
| BanII | GRGCYC | 1 cut(s) | 81 |
| BauI | CACGAG | 1 cut(s) | 95 |
| BbrPI | CACGTG | 1 cut(s) | 74 |
| BbsI | GAAGAC | 1 cut(s) | 224 |
| Bbv12I | GWGCWC | 1 cut(s) | 81 |
| BbvI | GCAGC | 2 cut(s) | 148, 433 |
| BccI | CCATC | 1 cut(s) | 185 |
| BceAI | ACGGC | 1 cut(s) | 434 |
| BciT130I | CCWGG | 3 cut(s) | 207, 588, 616 |
| BcoDI | GTCTC | 1 cut(s) | 128 |
| BfmI | CTRYAG | 1 cut(s) | 189 |
| BisI | GCNGC | 2 cut(s) | 162, 447 |
| BlsI | GCNGC | 2 cut(s) | 163, 448 |
| Bme1390I | CCNGG | 3 cut(s) | 207, 588, 616 |
| Bme18I | GGWCC | 1 cut(s) | 584 |
| BmgT120I | GGNCC | 1 cut(s) | 584 |
| BmrFI | CCNGG | 3 cut(s) | 207, 588, 616 |
| BmsI | GCATC | 2 cut(s) | 377, 531 |
| BpiI | GAAGAC | 1 cut(s) | 224 |
| BsaAI | YACGTR | 1 cut(s) | 74 |
| BsaBI | GATNNNNATC | 1 cut(s) | 269 |
| BsaJI | CCNNGG | 2 cut(s) | 309, 614 |
| Bse1I | ACTGG | 2 cut(s) | 29, 469 |
| Bse8I | GATNNNNATC | 1 cut(s) | 269 |
| BseBI | CCWGG | 3 cut(s) | 207, 588, 616 |
| BseDI | CCNNGG | 2 cut(s) | 309, 614 |
| BseGI | GGATG | 3 cut(s) | 286, 299, 546 |
| BseJI | GATNNNNATC | 1 cut(s) | 269 |
| BseNI | ACTGG | 2 cut(s) | 29, 469 |
| BseXI | GCAGC | 2 cut(s) | 148, 433 |
| BsiHKAI | GWGCWC | 1 cut(s) | 81 |
| BsmAI | GTCTC | 1 cut(s) | 128 |
| BsmI | GAATGC | 1 cut(s) | 194 |
| Bsp1286I | GDGCHC | 1 cut(s) | 81 |
| Bsp1407I | TGTACA | 1 cut(s) | 149 |
| Bsp143I | GATC | 2 cut(s) | 390, 522 |
| BspACI | CCGC | 1 cut(s) | 201 |
| BsrBI | CCGCTC | 1 cut(s) | 203 |
| BsrGI | TGTACA | 1 cut(s) | 149 |
| BsrI | ACTGG | 2 cut(s) | 29, 469 |
| BssECI | CCNNGG | 2 cut(s) | 309, 614 |
| BssMI | GATC | 2 cut(s) | 390, 522 |
| BssSI | CACGAG | 1 cut(s) | 95 |
| Bst2BI | CACGAG | 1 cut(s) | 95 |
| Bst2UI | CCWGG | 3 cut(s) | 207, 588, 616 |
| Bst4CI | ACNGT | 1 cut(s) | 154 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 443 |
| BstAUI | TGTACA | 1 cut(s) | 149 |
| BstBAI | YACGTR | 1 cut(s) | 74 |
| BstC8I | GCNNGC | 1 cut(s) | 510 |
| BstF5I | GGATG | 3 cut(s) | 286, 299, 546 |
| BstKTI | GATC | 2 cut(s) | 393, 525 |
| BstMAI | GTCTC | 1 cut(s) | 128 |
| BstMBI | GATC | 2 cut(s) | 390, 522 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 200, 443 |
| BstNI | CCWGG | 3 cut(s) | 207, 588, 616 |
| BstSCI | CCNGG | 3 cut(s) | 205, 586, 614 |
| BstSFI | CTRYAG | 1 cut(s) | 189 |
| BstV1I | GCAGC | 2 cut(s) | 148, 433 |
| BstV2I | GAAGAC | 1 cut(s) | 224 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 244 |
| BtsCI | GGATG | 3 cut(s) | 286, 299, 546 |
| Cac8I | GCNNGC | 1 cut(s) | 510 |
| CaiI | CAGNNNCTG | 1 cut(s) | 615 |
| Cfr13I | GGNCC | 1 cut(s) | 584 |
| Csp6I | GTAC | 2 cut(s) | 26, 150 |
| CviAII | CATG | 4 cut(s) | 41, 181, 244, 427 |
| CviJI | RGCY | 3 cut(s) | 79, 161, 512 |
| CviKI_1 | RGCY | 3 cut(s) | 79, 161, 512 |
| CviQI | GTAC | 2 cut(s) | 26, 150 |
| DpnI | GATC | 2 cut(s) | 392, 524 |
| DpnII | GATC | 2 cut(s) | 390, 522 |
| DraIII | CACNNNGTG | 1 cut(s) | 74 |
| Ecl136II | GAGCTC | 1 cut(s) | 79 |
| Eco24I | GRGCYC | 1 cut(s) | 81 |
| Eco47I | GGWCC | 1 cut(s) | 584 |
| Eco53kI | GAGCTC | 1 cut(s) | 79 |
| Eco72I | CACGTG | 1 cut(s) | 74 |
| EcoICRI | GAGCTC | 1 cut(s) | 79 |
| EcoRII | CCWGG | 3 cut(s) | 205, 586, 614 |
| EcoT22I | ATGCAT | 1 cut(s) | 42 |
| EcoT38I | GRGCYC | 1 cut(s) | 81 |
| FaeI | CATG | 4 cut(s) | 44, 184, 247, 430 |
| FatI | CATG | 4 cut(s) | 40, 180, 243, 426 |
| FauNDI | CATATG | 1 cut(s) | 63 |
| Fnu4HI | GCNGC | 2 cut(s) | 162, 447 |
| FokI | GGATG | 3 cut(s) | 286, 293, 553 |
| FriOI | GRGCYC | 1 cut(s) | 81 |
| Fsp4HI | GCNGC | 2 cut(s) | 162, 447 |
| GluI | GCNGC | 2 cut(s) | 162, 447 |
| Hin1II | CATG | 4 cut(s) | 44, 184, 247, 430 |
| HinfI | GANTC | 2 cut(s) | 44, 330 |
| HphI | GGTGA | 3 cut(s) | 190, 479, 517 |
| Hpy188I | TCNGA | 3 cut(s) | 280, 522, 611 |
| Hpy188III | TCNNGA | 2 cut(s) | 95, 415 |
| HpyAV | CCTTC | 1 cut(s) | 598 |
| HpyCH4III | ACNGT | 1 cut(s) | 154 |
| HpyCH4IV | ACGT | 2 cut(s) | 73, 343 |
| HpyCH4V | TGCA | 5 cut(s) | 40, 116, 350, 437, 544 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 200, 443 |
| HpySE526I | ACGT | 2 cut(s) | 73, 343 |
| Hsp92II | CATG | 4 cut(s) | 44, 184, 247, 430 |
| Kzo9I | GATC | 2 cut(s) | 390, 522 |
| LmnI | GCTCC | 1 cut(s) | 208 |
| LpnPI | CCDG | 9 cut(s) | 42, 192, 213, 219, 450, 494, 573, 600, 601 |
| Lsp1109I | GCAGC | 2 cut(s) | 148, 433 |
| LweI | GCATC | 2 cut(s) | 377, 531 |
| MaeII | ACGT | 2 cut(s) | 73, 343 |
| MaeIII | GTNAC | 3 cut(s) | 172, 221, 295 |
| MalI | GATC | 2 cut(s) | 392, 524 |
| MbiI | CCGCTC | 1 cut(s) | 203 |
| MboI | GATC | 2 cut(s) | 390, 522 |
| MboII | GAAGA | 3 cut(s) | 224, 365, 509 |
| MhlI | GDGCHC | 1 cut(s) | 81 |
| MluCI | AATT | 3 cut(s) | 101, 315, 478 |
| MnlI | CCTC | 6 cut(s) | 4, 319, 344, 374, 422, 563 |
| Mph1103I | ATGCAT | 1 cut(s) | 42 |
| MseI | TTAA | 4 cut(s) | 104, 129, 261, 597 |
| MslI | CAYNNNNRTG | 2 cut(s) | 242, 458 |
| MspR9I | CCNGG | 3 cut(s) | 207, 588, 616 |
| Mva1269I | GAATGC | 1 cut(s) | 194 |
| MvaI | CCWGG | 3 cut(s) | 207, 588, 616 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 200, 443 |
| NdeI | CATATG | 1 cut(s) | 63 |
| NdeII | GATC | 2 cut(s) | 390, 522 |
| NlaIII | CATG | 4 cut(s) | 44, 184, 247, 430 |
| NmuCI | GTSAC | 1 cut(s) | 295 |
| NsiI | ATGCAT | 1 cut(s) | 42 |
| PctI | GAATGC | 1 cut(s) | 194 |
| PfeI | GAWTC | 2 cut(s) | 44, 330 |
| PkrI | GCNGC | 2 cut(s) | 163, 448 |
| PmaCI | CACGTG | 1 cut(s) | 74 |
| PmlI | CACGTG | 1 cut(s) | 74 |
| Ppu21I | YACGTR | 1 cut(s) | 74 |
| PshBI | ATTAAT | 1 cut(s) | 104 |
| Psp124BI | GAGCTC | 1 cut(s) | 81 |
| Psp6I | CCWGG | 3 cut(s) | 205, 586, 614 |
| PspCI | CACGTG | 1 cut(s) | 74 |
| PspGI | CCWGG | 3 cut(s) | 205, 586, 614 |
| PspPI | GGNCC | 1 cut(s) | 584 |
| PstNI | CAGNNNCTG | 1 cut(s) | 615 |
| RsaI | GTAC | 2 cut(s) | 27, 151 |
| RsaNI | GTAC | 2 cut(s) | 26, 150 |
| RseI | CAYNNNNRTG | 2 cut(s) | 242, 458 |
| SacI | GAGCTC | 1 cut(s) | 81 |
| SaqAI | TTAA | 4 cut(s) | 104, 129, 261, 597 |
| SatI | GCNGC | 2 cut(s) | 162, 447 |
| Sau3AI | GATC | 2 cut(s) | 390, 522 |
| Sau96I | GGNCC | 1 cut(s) | 584 |
| ScrFI | CCNGG | 3 cut(s) | 207, 588, 616 |
| SduI | GDGCHC | 1 cut(s) | 81 |
| SetI | ASST | 9 cut(s) | 15, 76, 81, 163, 232, 311, 346, 581, 609 |
| SfaNI | GCATC | 2 cut(s) | 377, 531 |
| SfcI | CTRYAG | 1 cut(s) | 189 |
| SinI | GGWCC | 1 cut(s) | 584 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 242, 458 |
| Sse9I | AATT | 3 cut(s) | 101, 315, 478 |
| SsiI | CCGC | 1 cut(s) | 201 |
| SspI | AATATT | 1 cut(s) | 594 |
| SstI | GAGCTC | 1 cut(s) | 81 |
| StyD4I | CCNGG | 3 cut(s) | 205, 586, 614 |
| TaaI | ACNGT | 1 cut(s) | 154 |
| TaiI | ACGT | 2 cut(s) | 76, 346 |
| TaqI | TCGA | 1 cut(s) | 416 |
| TaqII | GACCGA | 1 cut(s) | 383 |
| TasI | AATT | 3 cut(s) | 101, 315, 478 |
| TatI | WGTACW | 1 cut(s) | 149 |
| TfiI | GAWTC | 2 cut(s) | 44, 330 |
| Tru1I | TTAA | 4 cut(s) | 104, 129, 261, 597 |
| Tru9I | TTAA | 4 cut(s) | 104, 129, 261, 597 |
| TseFI | GTSAC | 1 cut(s) | 295 |
| TseI | GCWGC | 2 cut(s) | 161, 446 |
| Tsp45I | GTSAC | 1 cut(s) | 295 |
| TspDTI | ATGAA | 4 cut(s) | 57, 122, 232, 559 |
| VpaK11BI | GGWCC | 1 cut(s) | 584 |
| VspI | ATTAAT | 1 cut(s) | 104 |
| XapI | RAATTY | 1 cut(s) | 478 |
| Zsp2I | ATGCAT | 1 cut(s) | 42 |