protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 249 - 360 | 1.1e-19 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 755 |
| AccII | CGCG | 1 cut(s) | 559 |
| AccIII | TCCGGA | 1 cut(s) | 514 |
| AciI | CCGC | 4 cut(s) | 455, 557, 719, 906 |
| AclI | AACGTT | 1 cut(s) | 1101 |
| AclWI | GGATC | 4 cut(s) | 19, 53, 528, 971 |
| AcsI | RAATTY | 4 cut(s) | 25, 167, 414, 563 |
| AcuI | CTGAAG | 1 cut(s) | 777 |
| AdeI | CACNNNGTG | 1 cut(s) | 560 |
| AfaI | GTAC | 2 cut(s) | 637, 715 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 454 |
| AgsI | TTSAA | 5 cut(s) | 8, 290, 490, 527, 1053 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 270, 302 |
| AluBI | AGCT | 3 cut(s) | 164, 182, 362 |
| AluI | AGCT | 3 cut(s) | 164, 182, 362 |
| Alw21I | GWGCWC | 1 cut(s) | 652 |
| AlwI | GGATC | 4 cut(s) | 19, 53, 528, 971 |
| Aor13HI | TCCGGA | 1 cut(s) | 514 |
| AoxI | GGCC | 1 cut(s) | 274 |
| ApeKI | GCWGC | 2 cut(s) | 179, 194 |
| ApoI | RAATTY | 4 cut(s) | 25, 167, 414, 563 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 77 |
| AspLEI | GCGC | 1 cut(s) | 504 |
| AspS9I | GGNCC | 1 cut(s) | 274 |
| AsuHPI | GGTGA | 2 cut(s) | 395, 604 |
| Bbv12I | GWGCWC | 1 cut(s) | 652 |
| BbvI | GCAGC | 2 cut(s) | 191, 206 |
| BccI | CCATC | 4 cut(s) | 374, 403, 433, 958 |
| BciVI | GTATCC | 1 cut(s) | 455 |
| BfaI | CTAG | 1 cut(s) | 510 |
| BfuI | GTATCC | 1 cut(s) | 455 |
| BglII | AGATCT | 1 cut(s) | 1041 |
| BisI | GCNGC | 4 cut(s) | 180, 195, 456, 906 |
| BlsI | GCNGC | 4 cut(s) | 181, 196, 457, 907 |
| BmcAI | AGTACT | 1 cut(s) | 715 |
| BmgT120I | GGNCC | 1 cut(s) | 274 |
| BmsI | GCATC | 1 cut(s) | 1008 |
| BsaJI | CCNNGG | 2 cut(s) | 448, 909 |
| BsaWI | WCCGGW | 1 cut(s) | 514 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 454 |
| BseAI | TCCGGA | 1 cut(s) | 514 |
| BseDI | CCNNGG | 2 cut(s) | 448, 909 |
| BseGI | GGATG | 1 cut(s) | 1023 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 454 |
| BseMII | CTCAG | 1 cut(s) | 862 |
| BseRI | GAGGAG | 1 cut(s) | 687 |
| BseXI | GCAGC | 2 cut(s) | 191, 206 |
| Bsh1236I | CGCG | 1 cut(s) | 559 |
| BshFI | GGCC | 1 cut(s) | 276 |
| BsiHKAI | GWGCWC | 1 cut(s) | 652 |
| BsiSI | CCGG | 1 cut(s) | 515 |
| BslFI | GGGAC | 1 cut(s) | 891 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 454 |
| BsmFI | GGGAC | 1 cut(s) | 891 |
| BsmI | GAATGC | 2 cut(s) | 680, 740 |
| BsnI | GGCC | 1 cut(s) | 276 |
| Bsp1286I | GDGCHC | 1 cut(s) | 652 |
| Bsp13I | TCCGGA | 1 cut(s) | 514 |
| Bsp1407I | TGTACA | 1 cut(s) | 635 |
| Bsp143I | GATC | 5 cut(s) | 11, 45, 520, 963, 1041 |
| Bsp19I | CCATGG | 1 cut(s) | 909 |
| BspACI | CCGC | 4 cut(s) | 455, 557, 719, 906 |
| BspANI | GGCC | 1 cut(s) | 276 |
| BspCNI | CTCAG | 1 cut(s) | 861 |
| BspEI | TCCGGA | 1 cut(s) | 514 |
| BspFNI | CGCG | 1 cut(s) | 559 |
| BspPI | GGATC | 4 cut(s) | 19, 53, 528, 971 |
| BspQI | GCTCTTC | 1 cut(s) | 975 |
| BsrGI | TGTACA | 1 cut(s) | 635 |
| BssECI | CCNNGG | 2 cut(s) | 448, 909 |
| BssMI | GATC | 5 cut(s) | 11, 45, 520, 963, 1041 |
| BssT1I | CCWWGG | 1 cut(s) | 909 |
| Bst4CI | ACNGT | 2 cut(s) | 144, 640 |
| Bst6I | CTCTTC | 1 cut(s) | 975 |
| BstAUI | TGTACA | 1 cut(s) | 635 |
| BstC8I | GCNNGC | 1 cut(s) | 162 |
| BstDEI | CTNAG | 2 cut(s) | 97, 848 |
| BstDSI | CCRYGG | 2 cut(s) | 448, 909 |
| BstF5I | GGATG | 1 cut(s) | 1023 |
| BstFNI | CGCG | 1 cut(s) | 559 |
| BstHHI | GCGC | 1 cut(s) | 504 |
| BstKTI | GATC | 5 cut(s) | 14, 48, 523, 966, 1044 |
| BstMBI | GATC | 5 cut(s) | 11, 45, 520, 963, 1041 |
| BstNSI | RCATGY | 2 cut(s) | 109, 1091 |
| BstUI | CGCG | 1 cut(s) | 559 |
| BstV1I | GCAGC | 2 cut(s) | 191, 206 |
| BstX2I | RGATCY | 2 cut(s) | 520, 1041 |
| BstYI | RGATCY | 2 cut(s) | 520, 1041 |
| BsuI | GTATCC | 1 cut(s) | 455 |
| BsuRI | GGCC | 1 cut(s) | 276 |
| BtgI | CCRYGG | 2 cut(s) | 448, 909 |
| BtgZI | GCGATG | 1 cut(s) | 405 |
| BtsCI | GGATG | 1 cut(s) | 1023 |
| Cac8I | GCNNGC | 1 cut(s) | 162 |
| CfoI | GCGC | 1 cut(s) | 504 |
| Cfr13I | GGNCC | 1 cut(s) | 274 |
| CseI | GACGC | 1 cut(s) | 773 |
| Csp6I | GTAC | 2 cut(s) | 636, 714 |
| CviAII | CATG | 8 cut(s) | 89, 106, 335, 505, 664, 910, 960, 1088 |
| CviJI | RGCY | 8 cut(s) | 164, 182, 208, 276, 362, 458, 509, 530 |
| CviKI_1 | RGCY | 8 cut(s) | 164, 182, 208, 276, 362, 458, 509, 530 |
| CviQI | GTAC | 2 cut(s) | 636, 714 |
| DdeI | CTNAG | 2 cut(s) | 97, 848 |
| DpnI | GATC | 5 cut(s) | 13, 47, 522, 965, 1043 |
| DpnII | GATC | 5 cut(s) | 11, 45, 520, 963, 1041 |
| DraIII | CACNNNGTG | 1 cut(s) | 560 |
| Eam1104I | CTCTTC | 1 cut(s) | 975 |
| EarI | CTCTTC | 1 cut(s) | 975 |
| EciI | GGCGGA | 1 cut(s) | 708 |
| Eco130I | CCWWGG | 1 cut(s) | 909 |
| Eco57I | CTGAAG | 1 cut(s) | 777 |
| EcoRI | GAATTC | 1 cut(s) | 167 |
| EcoT14I | CCWWGG | 1 cut(s) | 909 |
| ErhI | CCWWGG | 1 cut(s) | 909 |
| FaeI | CATG | 8 cut(s) | 92, 109, 338, 508, 667, 913, 963, 1091 |
| FaqI | GGGAC | 1 cut(s) | 891 |
| FatI | CATG | 8 cut(s) | 88, 105, 334, 504, 663, 909, 959, 1087 |
| FauNDI | CATATG | 1 cut(s) | 405 |
| Fnu4HI | GCNGC | 4 cut(s) | 180, 195, 456, 906 |
| FokI | GGATG | 1 cut(s) | 1030 |
| Fsp4HI | GCNGC | 4 cut(s) | 180, 195, 456, 906 |
| FspBI | CTAG | 1 cut(s) | 510 |
| GlaI | GCGC | 1 cut(s) | 503 |
| GluI | GCNGC | 4 cut(s) | 180, 195, 456, 906 |
| HaeIII | GGCC | 1 cut(s) | 276 |
| HapII | CCGG | 1 cut(s) | 515 |
| HgaI | GACGC | 1 cut(s) | 773 |
| HhaI | GCGC | 1 cut(s) | 504 |
| Hin1II | CATG | 8 cut(s) | 92, 109, 338, 508, 667, 913, 963, 1091 |
| Hin6I | GCGC | 1 cut(s) | 502 |
| HinP1I | GCGC | 1 cut(s) | 502 |
| HindIII | AAGCTT | 1 cut(s) | 360 |
| HinfI | GANTC | 1 cut(s) | 813 |
| HpaII | CCGG | 1 cut(s) | 515 |
| HphI | GGTGA | 2 cut(s) | 395, 604 |
| Hpy166II | GTNNAC | 1 cut(s) | 73 |
| Hpy188I | TCNGA | 3 cut(s) | 702, 885, 955 |
| Hpy188III | TCNNGA | 3 cut(s) | 515, 524, 545 |
| Hpy8I | GTNNAC | 1 cut(s) | 73 |
| HpyAV | CCTTC | 2 cut(s) | 593, 729 |
| HpyCH4III | ACNGT | 2 cut(s) | 144, 640 |
| HpyCH4IV | ACGT | 2 cut(s) | 826, 1101 |
| HpyF3I | CTNAG | 2 cut(s) | 97, 848 |
| HpySE526I | ACGT | 2 cut(s) | 826, 1101 |
| Hsp92II | CATG | 8 cut(s) | 92, 109, 338, 508, 667, 913, 963, 1091 |
| HspAI | GCGC | 1 cut(s) | 502 |
| Kpn2I | TCCGGA | 1 cut(s) | 514 |
| Kzo9I | GATC | 5 cut(s) | 11, 45, 520, 963, 1041 |
| LguI | GCTCTTC | 1 cut(s) | 975 |
| LmnI | GCTCC | 1 cut(s) | 499 |
| LpnPI | CCDG | 5 cut(s) | 528, 730, 794, 959, 975 |
| Lsp1109I | GCAGC | 2 cut(s) | 191, 206 |
| LweI | GCATC | 1 cut(s) | 1008 |
| MaeI | CTAG | 1 cut(s) | 510 |
| MaeII | ACGT | 2 cut(s) | 826, 1101 |
| MaeIII | GTNAC | 2 cut(s) | 477, 658 |
| MalI | GATC | 5 cut(s) | 13, 47, 522, 965, 1043 |
| MboI | GATC | 5 cut(s) | 11, 45, 520, 963, 1041 |
| MboII | GAAGA | 5 cut(s) | 145, 420, 848, 962, 1077 |
| MfeI | CAATTG | 1 cut(s) | 999 |
| MflI | RGATCY | 2 cut(s) | 520, 1041 |
| MhlI | GDGCHC | 1 cut(s) | 652 |
| MmeI | TCCRAC | 1 cut(s) | 477 |
| MnlI | CCTC | 9 cut(s) | 142, 197, 511, 708, 827, 857, 870, 937, 1015 |
| MroI | TCCGGA | 1 cut(s) | 514 |
| MroXI | GAANNNNTTC | 1 cut(s) | 77 |
| MseI | TTAA | 5 cut(s) | 119, 233, 324, 342, 1097 |
| MslI | CAYNNNNRTG | 2 cut(s) | 81, 1012 |
| MspI | CCGG | 1 cut(s) | 515 |
| MunI | CAATTG | 1 cut(s) | 999 |
| Mva1269I | GAATGC | 2 cut(s) | 680, 740 |
| MvnI | CGCG | 1 cut(s) | 559 |
| NcoI | CCATGG | 1 cut(s) | 909 |
| NdeI | CATATG | 1 cut(s) | 405 |
| NdeII | GATC | 5 cut(s) | 11, 45, 520, 963, 1041 |
| NlaIII | CATG | 8 cut(s) | 92, 109, 338, 508, 667, 913, 963, 1091 |
| NspI | RCATGY | 2 cut(s) | 109, 1091 |
| PciSI | GCTCTTC | 1 cut(s) | 975 |
| PctI | GAATGC | 2 cut(s) | 680, 740 |
| PdmI | GAANNNNTTC | 1 cut(s) | 77 |
| PfeI | GAWTC | 1 cut(s) | 813 |
| PkrI | GCNGC | 4 cut(s) | 181, 196, 457, 907 |
| PsiI | TTATAA | 1 cut(s) | 755 |
| Psp1406I | AACGTT | 1 cut(s) | 1101 |
| PspPI | GGNCC | 1 cut(s) | 274 |
| PsuI | RGATCY | 2 cut(s) | 520, 1041 |
| RsaI | GTAC | 2 cut(s) | 637, 715 |
| RsaNI | GTAC | 2 cut(s) | 636, 714 |
| RseI | CAYNNNNRTG | 2 cut(s) | 81, 1012 |
| SapI | GCTCTTC | 1 cut(s) | 975 |
| SaqAI | TTAA | 5 cut(s) | 119, 233, 324, 342, 1097 |
| SatI | GCNGC | 4 cut(s) | 180, 195, 456, 906 |
| Sau3AI | GATC | 5 cut(s) | 11, 45, 520, 963, 1041 |
| Sau96I | GGNCC | 1 cut(s) | 274 |
| ScaI | AGTACT | 1 cut(s) | 715 |
| SduI | GDGCHC | 1 cut(s) | 652 |
| SetI | ASST | 7 cut(s) | 166, 184, 285, 364, 649, 829, 1104 |
| SfaNI | GCATC | 1 cut(s) | 1008 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 81, 1012 |
| SsiI | CCGC | 4 cut(s) | 455, 557, 719, 906 |
| SspI | AATATT | 1 cut(s) | 231 |
| SspMI | CTAG | 1 cut(s) | 510 |
| StyI | CCWWGG | 1 cut(s) | 909 |
| TaaI | ACNGT | 2 cut(s) | 144, 640 |
| TaiI | ACGT | 2 cut(s) | 829, 1104 |
| TaqI | TCGA | 4 cut(s) | 300, 611, 862, 1074 |
| TatI | WGTACW | 2 cut(s) | 635, 713 |
| TauI | GCSGC | 2 cut(s) | 458, 908 |
| TfiI | GAWTC | 1 cut(s) | 813 |
| Tru1I | TTAA | 5 cut(s) | 119, 233, 324, 342, 1097 |
| Tru9I | TTAA | 5 cut(s) | 119, 233, 324, 342, 1097 |
| TseI | GCWGC | 2 cut(s) | 179, 194 |
| TspDTI | ATGAA | 6 cut(s) | 75, 80, 105, 389, 408, 629 |
| TspGWI | ACGGA | 2 cut(s) | 71, 437 |
| XapI | RAATTY | 4 cut(s) | 25, 167, 414, 563 |
| XceI | RCATGY | 2 cut(s) | 109, 1091 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 957 |
| XmnI | GAANNNNTTC | 1 cut(s) | 77 |
| XspI | CTAG | 1 cut(s) | 510 |
| ZrmI | AGTACT | 1 cut(s) | 715 |