protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 609 |
| AcsI | RAATTY | 3 cut(s) | 42, 49, 367 |
| AcuI | CTGAAG | 1 cut(s) | 291 |
| AfaI | GTAC | 3 cut(s) | 24, 148, 511 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 609 |
| AgsI | TTSAA | 1 cut(s) | 242 |
| AhlI | ACTAGT | 1 cut(s) | 289 |
| AjnI | CCWGG | 2 cut(s) | 202, 580 |
| AluBI | AGCT | 1 cut(s) | 245 |
| AluI | AGCT | 1 cut(s) | 245 |
| Alw26I | GTCTC | 1 cut(s) | 124 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 203 |
| AoxI | GGCC | 2 cut(s) | 391, 480 |
| ApeKI | GCWGC | 2 cut(s) | 185, 188 |
| ApoI | RAATTY | 3 cut(s) | 42, 49, 367 |
| AspLEI | GCGC | 1 cut(s) | 161 |
| AspS9I | GGNCC | 2 cut(s) | 480, 578 |
| AsuHPI | GGTGA | 1 cut(s) | 391 |
| AvaII | GGWCC | 1 cut(s) | 578 |
| BbvI | GCAGC | 2 cut(s) | 172, 200 |
| BccI | CCATC | 1 cut(s) | 50 |
| BciT130I | CCWGG | 2 cut(s) | 204, 582 |
| BcoDI | GTCTC | 1 cut(s) | 124 |
| BcuI | ACTAGT | 1 cut(s) | 289 |
| BfaI | CTAG | 2 cut(s) | 290, 507 |
| BfmI | CTRYAG | 1 cut(s) | 186 |
| BfoI | RGCGCY | 1 cut(s) | 162 |
| BisI | GCNGC | 2 cut(s) | 186, 189 |
| BlsI | GCNGC | 2 cut(s) | 187, 190 |
| BmcAI | AGTACT | 1 cut(s) | 511 |
| Bme1390I | CCNGG | 2 cut(s) | 204, 582 |
| Bme18I | GGWCC | 1 cut(s) | 578 |
| BmgT120I | GGNCC | 2 cut(s) | 480, 578 |
| BmrFI | CCNGG | 2 cut(s) | 204, 582 |
| BmsI | GCATC | 1 cut(s) | 24 |
| BpmI | CTGGAG | 1 cut(s) | 498 |
| BpuEI | CTTGAG | 1 cut(s) | 347 |
| BsaJI | CCNNGG | 1 cut(s) | 608 |
| BsaWI | WCCGGW | 1 cut(s) | 25 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 609 |
| Bse1I | ACTGG | 1 cut(s) | 515 |
| BseBI | CCWGG | 2 cut(s) | 204, 582 |
| BseDI | CCNNGG | 1 cut(s) | 608 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 609 |
| BseNI | ACTGG | 1 cut(s) | 515 |
| BseRI | GAGGAG | 2 cut(s) | 44, 122 |
| BseXI | GCAGC | 2 cut(s) | 172, 200 |
| BshFI | GGCC | 2 cut(s) | 393, 482 |
| BsiSI | CCGG | 1 cut(s) | 26 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 609 |
| BsmAI | GTCTC | 1 cut(s) | 124 |
| BsnI | GGCC | 2 cut(s) | 393, 482 |
| Bsp1407I | TGTACA | 1 cut(s) | 146 |
| Bsp19I | CCATGG | 1 cut(s) | 608 |
| BspANI | GGCC | 2 cut(s) | 393, 482 |
| BspHI | TCATGA | 1 cut(s) | 91 |
| BspMAI | CTGCAG | 1 cut(s) | 190 |
| BsrGI | TGTACA | 1 cut(s) | 146 |
| BsrI | ACTGG | 1 cut(s) | 515 |
| BssECI | CCNNGG | 1 cut(s) | 608 |
| BssT1I | CCWWGG | 1 cut(s) | 608 |
| Bst2UI | CCWGG | 2 cut(s) | 204, 582 |
| Bst4CI | ACNGT | 2 cut(s) | 151, 199 |
| BstAUI | TGTACA | 1 cut(s) | 146 |
| BstDEI | CTNAG | 2 cut(s) | 84, 246 |
| BstDSI | CCRYGG | 1 cut(s) | 608 |
| BstEII | GGTNACC | 1 cut(s) | 227 |
| BstH2I | RGCGCY | 1 cut(s) | 162 |
| BstHHI | GCGC | 1 cut(s) | 161 |
| BstMAI | GTCTC | 1 cut(s) | 124 |
| BstNI | CCWGG | 2 cut(s) | 204, 582 |
| BstPI | GGTNACC | 1 cut(s) | 227 |
| BstSCI | CCNGG | 2 cut(s) | 202, 580 |
| BstSFI | CTRYAG | 1 cut(s) | 186 |
| BstV1I | GCAGC | 2 cut(s) | 172, 200 |
| BsuRI | GGCC | 2 cut(s) | 393, 482 |
| BtgI | CCRYGG | 1 cut(s) | 608 |
| CaiI | CAGNNNCTG | 1 cut(s) | 203 |
| CciI | TCATGA | 1 cut(s) | 91 |
| CfoI | GCGC | 1 cut(s) | 161 |
| Cfr13I | GGNCC | 2 cut(s) | 480, 578 |
| Csp6I | GTAC | 3 cut(s) | 23, 147, 510 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 163, 198 |
| CviAII | CATG | 6 cut(s) | 38, 71, 92, 424, 477, 609 |
| CviJI | RGCY | 4 cut(s) | 245, 393, 482, 602 |
| CviKI_1 | RGCY | 4 cut(s) | 245, 393, 482, 602 |
| CviQI | GTAC | 3 cut(s) | 23, 147, 510 |
| DdeI | CTNAG | 2 cut(s) | 84, 246 |
| Eco130I | CCWWGG | 1 cut(s) | 608 |
| Eco147I | AGGCCT | 1 cut(s) | 393 |
| Eco47I | GGWCC | 1 cut(s) | 578 |
| Eco57I | CTGAAG | 1 cut(s) | 291 |
| Eco91I | GGTNACC | 1 cut(s) | 227 |
| EcoO65I | GGTNACC | 1 cut(s) | 227 |
| EcoRII | CCWGG | 2 cut(s) | 202, 580 |
| EcoT14I | CCWWGG | 1 cut(s) | 608 |
| EcoT22I | ATGCAT | 1 cut(s) | 39 |
| ErhI | CCWWGG | 1 cut(s) | 608 |
| FaeI | CATG | 6 cut(s) | 41, 74, 95, 427, 480, 612 |
| FatI | CATG | 6 cut(s) | 37, 70, 91, 423, 476, 608 |
| Fnu4HI | GCNGC | 2 cut(s) | 186, 189 |
| Fsp4HI | GCNGC | 2 cut(s) | 186, 189 |
| FspBI | CTAG | 2 cut(s) | 290, 507 |
| GlaI | GCGC | 1 cut(s) | 160 |
| GluI | GCNGC | 2 cut(s) | 186, 189 |
| GsuI | CTGGAG | 1 cut(s) | 498 |
| HaeII | RGCGCY | 1 cut(s) | 162 |
| HaeIII | GGCC | 2 cut(s) | 393, 482 |
| HapII | CCGG | 1 cut(s) | 26 |
| HhaI | GCGC | 1 cut(s) | 161 |
| Hin1II | CATG | 6 cut(s) | 41, 74, 95, 427, 480, 612 |
| Hin6I | GCGC | 1 cut(s) | 159 |
| HinP1I | GCGC | 1 cut(s) | 159 |
| HincII | GTYRAC | 1 cut(s) | 570 |
| HindII | GTYRAC | 1 cut(s) | 570 |
| HinfI | GANTC | 2 cut(s) | 88, 327 |
| HpaII | CCGG | 1 cut(s) | 26 |
| HphI | GGTGA | 1 cut(s) | 391 |
| Hpy166II | GTNNAC | 2 cut(s) | 399, 570 |
| Hpy188I | TCNGA | 3 cut(s) | 55, 277, 623 |
| Hpy188III | TCNNGA | 2 cut(s) | 92, 364 |
| Hpy8I | GTNNAC | 2 cut(s) | 399, 570 |
| HpyCH4III | ACNGT | 2 cut(s) | 151, 199 |
| HpyCH4IV | ACGT | 1 cut(s) | 340 |
| HpyCH4V | TGCA | 6 cut(s) | 4, 37, 188, 347, 495, 538 |
| HpyF3I | CTNAG | 2 cut(s) | 84, 246 |
| HpySE526I | ACGT | 1 cut(s) | 340 |
| Hsp92II | CATG | 6 cut(s) | 41, 74, 95, 427, 480, 612 |
| HspAI | GCGC | 1 cut(s) | 159 |
| Lsp1109I | GCAGC | 2 cut(s) | 172, 200 |
| LweI | GCATC | 1 cut(s) | 24 |
| MaeI | CTAG | 2 cut(s) | 290, 507 |
| MaeII | ACGT | 1 cut(s) | 340 |
| MaeIII | GTNAC | 2 cut(s) | 169, 227 |
| MboII | GAAGA | 4 cut(s) | 288, 362, 432, 479 |
| MluCI | AATT | 5 cut(s) | 42, 49, 270, 367, 539 |
| MnlI | CCTC | 8 cut(s) | 7, 22, 100, 103, 341, 458, 532, 557 |
| Mph1103I | ATGCAT | 1 cut(s) | 39 |
| MseI | TTAA | 3 cut(s) | 462, 591, 615 |
| MslI | CAYNNNNRTG | 3 cut(s) | 425, 455, 529 |
| MspI | CCGG | 1 cut(s) | 26 |
| MspR9I | CCNGG | 2 cut(s) | 204, 582 |
| MvaI | CCWGG | 2 cut(s) | 204, 582 |
| NcoI | CCATGG | 1 cut(s) | 608 |
| NlaIII | CATG | 6 cut(s) | 41, 74, 95, 427, 480, 612 |
| NsiI | ATGCAT | 1 cut(s) | 39 |
| PagI | TCATGA | 1 cut(s) | 91 |
| PceI | AGGCCT | 1 cut(s) | 393 |
| PfeI | GAWTC | 2 cut(s) | 88, 327 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 609 |
| PkrI | GCNGC | 2 cut(s) | 187, 190 |
| Psp6I | CCWGG | 2 cut(s) | 202, 580 |
| PspEI | GGTNACC | 1 cut(s) | 227 |
| PspGI | CCWGG | 2 cut(s) | 202, 580 |
| PspPI | GGNCC | 2 cut(s) | 480, 578 |
| PstI | CTGCAG | 1 cut(s) | 190 |
| PstNI | CAGNNNCTG | 1 cut(s) | 203 |
| RsaI | GTAC | 3 cut(s) | 24, 148, 511 |
| RsaNI | GTAC | 3 cut(s) | 23, 147, 510 |
| RseI | CAYNNNNRTG | 3 cut(s) | 425, 455, 529 |
| SaqAI | TTAA | 3 cut(s) | 462, 591, 615 |
| SatI | GCNGC | 2 cut(s) | 186, 189 |
| Sau96I | GGNCC | 2 cut(s) | 480, 578 |
| ScaI | AGTACT | 1 cut(s) | 511 |
| ScrFI | CCNGG | 2 cut(s) | 204, 582 |
| SetI | ASST | 4 cut(s) | 12, 229, 247, 343 |
| SfaNI | GCATC | 1 cut(s) | 24 |
| SfcI | CTRYAG | 1 cut(s) | 186 |
| SinI | GGWCC | 1 cut(s) | 578 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 425, 455, 529 |
| SmlI | CTYRAG | 1 cut(s) | 362 |
| SmoI | CTYRAG | 1 cut(s) | 362 |
| SpeI | ACTAGT | 1 cut(s) | 289 |
| Sse9I | AATT | 5 cut(s) | 42, 49, 270, 367, 539 |
| SseBI | AGGCCT | 1 cut(s) | 393 |
| SspI | AATATT | 1 cut(s) | 588 |
| SspMI | CTAG | 2 cut(s) | 290, 507 |
| StuI | AGGCCT | 1 cut(s) | 393 |
| StyD4I | CCNGG | 2 cut(s) | 202, 580 |
| StyI | CCWWGG | 1 cut(s) | 608 |
| TaaI | ACNGT | 2 cut(s) | 151, 199 |
| TaiI | ACGT | 1 cut(s) | 343 |
| TasI | AATT | 5 cut(s) | 42, 49, 270, 367, 539 |
| TatI | WGTACW | 2 cut(s) | 146, 509 |
| TfiI | GAWTC | 2 cut(s) | 88, 327 |
| Tru1I | TTAA | 3 cut(s) | 462, 591, 615 |
| Tru9I | TTAA | 3 cut(s) | 462, 591, 615 |
| TseI | GCWGC | 2 cut(s) | 185, 188 |
| TspDTI | ATGAA | 5 cut(s) | 54, 87, 140, 256, 480 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 609 |
| VpaK11BI | GGWCC | 1 cut(s) | 578 |
| XapI | RAATTY | 3 cut(s) | 42, 49, 367 |
| XspI | CTAG | 2 cut(s) | 290, 507 |
| ZrmI | AGTACT | 1 cut(s) | 511 |
| Zsp2I | ATGCAT | 1 cut(s) | 39 |