protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 42 |
| AarI | CACCTGC | 1 cut(s) | 893 |
| Acc36I | ACCTGC | 1 cut(s) | 893 |
| Acc65I | GGTACC | 1 cut(s) | 399 |
| AccB1I | GGYRCC | 1 cut(s) | 399 |
| AccI | GTMKAC | 2 cut(s) | 792, 1505 |
| AccII | CGCG | 2 cut(s) | 177, 1282 |
| AciI | CCGC | 3 cut(s) | 67, 453, 635 |
| AclI | AACGTT | 1 cut(s) | 1543 |
| AcsI | RAATTY | 2 cut(s) | 594, 639 |
| AcuI | CTGAAG | 3 cut(s) | 864, 1233, 1311 |
| AfaI | GTAC | 4 cut(s) | 24, 401, 516, 941 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 443, 723 |
| AgsI | TTSAA | 5 cut(s) | 293, 761, 829, 1006, 1528 |
| AleI | CACNNNNGTG | 2 cut(s) | 111, 558 |
| AluBI | AGCT | 6 cut(s) | 149, 196, 671, 694, 738, 1010 |
| AluI | AGCT | 6 cut(s) | 149, 196, 671, 694, 738, 1010 |
| Alw21I | GWGCWC | 2 cut(s) | 696, 740 |
| Alw26I | GTCTC | 2 cut(s) | 221, 242 |
| Ama87I | CYCGRG | 1 cut(s) | 333 |
| AoxI | GGCC | 4 cut(s) | 445, 483, 714, 1333 |
| ApoI | RAATTY | 2 cut(s) | 594, 639 |
| Asp718I | GGTACC | 1 cut(s) | 399 |
| AspLEI | GCGC | 1 cut(s) | 177 |
| AspS9I | GGNCC | 2 cut(s) | 446, 483 |
| AsuC2I | CCSGG | 2 cut(s) | 841, 1146 |
| AsuHPI | GGTGA | 3 cut(s) | 91, 257, 975 |
| AvaI | CYCGRG | 1 cut(s) | 333 |
| BaeGI | GKGCMC | 1 cut(s) | 1105 |
| BanI | GGYRCC | 1 cut(s) | 399 |
| BanII | GRGCYC | 2 cut(s) | 696, 740 |
| BauI | CACGAG | 1 cut(s) | 818 |
| BbsI | GAAGAC | 1 cut(s) | 470 |
| Bbv12I | GWGCWC | 2 cut(s) | 696, 740 |
| BccI | CCATC | 4 cut(s) | 529, 827, 887, 1363 |
| BceAI | ACGGC | 2 cut(s) | 267, 750 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 563, 597 |
| BcnI | CCSGG | 2 cut(s) | 841, 1146 |
| BcoDI | GTCTC | 2 cut(s) | 221, 242 |
| BfaI | CTAG | 4 cut(s) | 668, 854, 1014, 1446 |
| BfmI | CTRYAG | 1 cut(s) | 1128 |
| BfuAI | ACCTGC | 1 cut(s) | 893 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 453 |
| BglII | AGATCT | 1 cut(s) | 427 |
| BmcAI | AGTACT | 1 cut(s) | 516 |
| Bme1390I | CCNGG | 2 cut(s) | 841, 1146 |
| BmeT110I | CYCGRG | 1 cut(s) | 333 |
| BmgT120I | GGNCC | 2 cut(s) | 446, 483 |
| BmiI | GGNNCC | 3 cut(s) | 401, 838, 979 |
| BmrFI | CCNGG | 2 cut(s) | 841, 1146 |
| BmrI | ACTGGG | 1 cut(s) | 105 |
| BmsI | GCATC | 5 cut(s) | 46, 1210, 1248, 1278, 1461 |
| BmuI | ACTGGG | 1 cut(s) | 105 |
| BpiI | GAAGAC | 1 cut(s) | 470 |
| BpuMI | CCSGG | 2 cut(s) | 841, 1146 |
| BsaAI | YACGTR | 1 cut(s) | 22 |
| BsaI | GGTCTC | 1 cut(s) | 221 |
| BsaJI | CCNNGG | 3 cut(s) | 47, 722, 972 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 443, 723 |
| Bse1I | ACTGG | 2 cut(s) | 111, 805 |
| Bse3DI | GCAATG | 3 cut(s) | 261, 363, 941 |
| BseDI | CCNNGG | 3 cut(s) | 47, 722, 972 |
| BseGI | GGATG | 3 cut(s) | 1071, 1269, 1476 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 443, 723 |
| BseMI | GCAATG | 3 cut(s) | 261, 363, 941 |
| BseNI | ACTGG | 2 cut(s) | 111, 805 |
| BseSI | GKGCMC | 1 cut(s) | 1105 |
| BsgI | GTGCAG | 3 cut(s) | 102, 221, 927 |
| Bsh1236I | CGCG | 2 cut(s) | 177, 1282 |
| BshFI | GGCC | 4 cut(s) | 447, 485, 716, 1335 |
| BshNI | GGYRCC | 1 cut(s) | 399 |
| BsiHKAI | GWGCWC | 2 cut(s) | 696, 740 |
| BsiHKCI | CYCGRG | 1 cut(s) | 333 |
| BsiSI | CCGG | 2 cut(s) | 840, 1145 |
| BslFI | GGGAC | 1 cut(s) | 811 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 443, 723 |
| BsmAI | GTCTC | 2 cut(s) | 221, 242 |
| BsmBI | CGTCTC | 1 cut(s) | 242 |
| BsmFI | GGGAC | 1 cut(s) | 811 |
| BsmI | GAATGC | 2 cut(s) | 299, 767 |
| BsnI | GGCC | 4 cut(s) | 447, 485, 716, 1335 |
| Bso31I | GGTCTC | 1 cut(s) | 221 |
| BsoBI | CYCGRG | 1 cut(s) | 333 |
| Bsp1286I | GDGCHC | 3 cut(s) | 696, 740, 1105 |
| Bsp143I | GATC | 3 cut(s) | 285, 427, 584 |
| BspACI | CCGC | 3 cut(s) | 67, 453, 635 |
| BspANI | GGCC | 4 cut(s) | 447, 485, 716, 1335 |
| BspFNI | CGCG | 2 cut(s) | 177, 1282 |
| BspLI | GGNNCC | 3 cut(s) | 401, 838, 979 |
| BspMAI | CTGCAG | 1 cut(s) | 1132 |
| BspMI | ACCTGC | 1 cut(s) | 893 |
| BspQI | GCTCTTC | 3 cut(s) | 156, 186, 210 |
| BspT107I | GGYRCC | 1 cut(s) | 399 |
| BspTNI | GGTCTC | 1 cut(s) | 221 |
| BsrDI | GCAATG | 3 cut(s) | 261, 363, 941 |
| BsrI | ACTGG | 2 cut(s) | 111, 805 |
| BssECI | CCNNGG | 3 cut(s) | 47, 722, 972 |
| BssMI | GATC | 3 cut(s) | 285, 427, 584 |
| BssNAI | GTATAC | 1 cut(s) | 793 |
| BssSI | CACGAG | 1 cut(s) | 818 |
| BssT1I | CCWWGG | 2 cut(s) | 47, 722 |
| Bst1107I | GTATAC | 1 cut(s) | 793 |
| Bst2BI | CACGAG | 1 cut(s) | 818 |
| Bst4CI | ACNGT | 3 cut(s) | 34, 661, 1141 |
| Bst6I | CTCTTC | 5 cut(s) | 156, 186, 210, 1352, 1387 |
| BstBAI | YACGTR | 1 cut(s) | 22 |
| BstC8I | GCNNGC | 1 cut(s) | 179 |
| BstDEI | CTNAG | 1 cut(s) | 372 |
| BstDSI | CCRYGG | 1 cut(s) | 972 |
| BstF5I | GGATG | 3 cut(s) | 1071, 1269, 1476 |
| BstFNI | CGCG | 2 cut(s) | 177, 1282 |
| BstHHI | GCGC | 1 cut(s) | 177 |
| BstKTI | GATC | 3 cut(s) | 288, 430, 587 |
| BstMAI | GTCTC | 2 cut(s) | 221, 242 |
| BstMBI | GATC | 3 cut(s) | 285, 427, 584 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 122, 453, 908, 977 |
| BstSCI | CCNGG | 2 cut(s) | 839, 1144 |
| BstSFI | CTRYAG | 1 cut(s) | 1128 |
| BstSLI | GKGCMC | 1 cut(s) | 1105 |
| BstSNI | TACGTA | 1 cut(s) | 22 |
| BstUI | CGCG | 2 cut(s) | 177, 1282 |
| BstV2I | GAAGAC | 1 cut(s) | 470 |
| BstX2I | RGATCY | 1 cut(s) | 427 |
| BstYI | RGATCY | 1 cut(s) | 427 |
| BstZ17I | GTATAC | 1 cut(s) | 793 |
| BsuRI | GGCC | 4 cut(s) | 447, 485, 716, 1335 |
| BtgI | CCRYGG | 1 cut(s) | 972 |
| BtgZI | GCGATG | 2 cut(s) | 881, 1263 |
| BtsCI | GGATG | 3 cut(s) | 1071, 1269, 1476 |
| BtsIMutI | CAGTG | 2 cut(s) | 118, 1105 |
| BveI | ACCTGC | 1 cut(s) | 893 |
| Cac8I | GCNNGC | 1 cut(s) | 179 |
| CfoI | GCGC | 1 cut(s) | 177 |
| Cfr13I | GGNCC | 2 cut(s) | 446, 483 |
| Csp6I | GTAC | 4 cut(s) | 23, 400, 515, 940 |
| CviAII | CATG | 7 cut(s) | 135, 578, 752, 850, 1046, 1366, 1399 |
| CviQI | GTAC | 4 cut(s) | 23, 400, 515, 940 |
| DdeI | CTNAG | 1 cut(s) | 372 |
| DpnI | GATC | 3 cut(s) | 287, 429, 586 |
| DpnII | GATC | 3 cut(s) | 285, 427, 584 |
| DraI | TTTAAA | 2 cut(s) | 618, 991 |
| Eam1104I | CTCTTC | 5 cut(s) | 156, 186, 210, 1352, 1387 |
| EarI | CTCTTC | 5 cut(s) | 156, 186, 210, 1352, 1387 |
| EciI | GGCGGA | 1 cut(s) | 650 |
| Ecl136II | GAGCTC | 2 cut(s) | 694, 738 |
| Eco105I | TACGTA | 1 cut(s) | 22 |
| Eco130I | CCWWGG | 2 cut(s) | 47, 722 |
| Eco147I | AGGCCT | 1 cut(s) | 1335 |
| Eco24I | GRGCYC | 2 cut(s) | 696, 740 |
| Eco31I | GGTCTC | 1 cut(s) | 221 |
| Eco53kI | GAGCTC | 2 cut(s) | 694, 738 |
| Eco57I | CTGAAG | 3 cut(s) | 864, 1233, 1311 |
| Eco88I | CYCGRG | 1 cut(s) | 333 |
| EcoICRI | GAGCTC | 2 cut(s) | 694, 738 |
| EcoO109I | RGGNCCY | 1 cut(s) | 446 |
| EcoT14I | CCWWGG | 2 cut(s) | 47, 722 |
| EcoT38I | GRGCYC | 2 cut(s) | 696, 740 |
| ErhI | CCWWGG | 2 cut(s) | 47, 722 |
| Esp3I | CGTCTC | 1 cut(s) | 242 |
| FaeI | CATG | 7 cut(s) | 138, 581, 755, 853, 1049, 1369, 1402 |
| FaqI | GGGAC | 1 cut(s) | 811 |
| FatI | CATG | 7 cut(s) | 134, 577, 751, 849, 1045, 1365, 1398 |
| FblI | GTMKAC | 2 cut(s) | 792, 1505 |
| FokI | GGATG | 3 cut(s) | 1078, 1256, 1483 |
| FriOI | GRGCYC | 2 cut(s) | 696, 740 |
| FspBI | CTAG | 4 cut(s) | 668, 854, 1014, 1446 |
| GlaI | GCGC | 1 cut(s) | 176 |
| HaeIII | GGCC | 4 cut(s) | 447, 485, 716, 1335 |
| HapII | CCGG | 2 cut(s) | 840, 1145 |
| HhaI | GCGC | 1 cut(s) | 177 |
| Hin1II | CATG | 7 cut(s) | 138, 581, 755, 853, 1049, 1369, 1402 |
| Hin6I | GCGC | 1 cut(s) | 175 |
| HinP1I | GCGC | 1 cut(s) | 175 |
| HinfI | GANTC | 4 cut(s) | 131, 338, 352, 358 |
| HpaII | CCGG | 2 cut(s) | 840, 1145 |
| HphI | GGTGA | 3 cut(s) | 91, 257, 975 |
| Hpy166II | GTNNAC | 5 cut(s) | 563, 793, 1137, 1153, 1506 |
| Hpy188I | TCNGA | 5 cut(s) | 357, 460, 535, 883, 1219 |
| Hpy188III | TCNNGA | 6 cut(s) | 283, 560, 770, 820, 1160, 1406 |
| Hpy8I | GTNNAC | 5 cut(s) | 563, 793, 1137, 1153, 1506 |
| HpyAV | CCTTC | 4 cut(s) | 82, 164, 888, 1493 |
| HpyCH4III | ACNGT | 3 cut(s) | 34, 661, 1141 |
| HpyCH4IV | ACGT | 2 cut(s) | 21, 1543 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 122, 453, 908, 977 |
| HpyF3I | CTNAG | 1 cut(s) | 372 |
| HpySE526I | ACGT | 2 cut(s) | 21, 1543 |
| Hsp92II | CATG | 7 cut(s) | 138, 581, 755, 853, 1049, 1369, 1402 |
| HspAI | GCGC | 1 cut(s) | 175 |
| KpnI | GGTACC | 1 cut(s) | 403 |
| Kzo9I | GATC | 3 cut(s) | 285, 427, 584 |
| LguI | GCTCTTC | 3 cut(s) | 156, 186, 210 |
| LmnI | GCTCC | 1 cut(s) | 977 |
| LpnPI | CCDG | 9 cut(s) | 124, 182, 355, 450, 786, 853, 888, 1152, 1158 |
| LweI | GCATC | 5 cut(s) | 46, 1210, 1248, 1278, 1461 |
| MaeI | CTAG | 4 cut(s) | 668, 854, 1014, 1446 |
| MaeII | ACGT | 2 cut(s) | 21, 1543 |
| MaeIII | GTNAC | 5 cut(s) | 412, 820, 964, 1243, 1406 |
| MalI | GATC | 3 cut(s) | 287, 429, 586 |
| MboI | GATC | 3 cut(s) | 285, 427, 584 |
| MfeI | CAATTG | 1 cut(s) | 221 |
| MflI | RGATCY | 1 cut(s) | 427 |
| MhlI | GDGCHC | 3 cut(s) | 696, 740, 1105 |
| MlyI | GAGTC | 1 cut(s) | 346 |
| MmeI | TCCRAC | 1 cut(s) | 1526 |
| MnlI | CCTC | 8 cut(s) | 413, 519, 827, 940, 991, 1115, 1406, 1511 |
| MseI | TTAA | 4 cut(s) | 11, 617, 990, 1184 |
| MslI | CAYNNNNRTG | 3 cut(s) | 111, 558, 1322 |
| MspI | CCGG | 2 cut(s) | 840, 1145 |
| MspR9I | CCNGG | 2 cut(s) | 841, 1146 |
| MunI | CAATTG | 1 cut(s) | 221 |
| Mva1269I | GAATGC | 2 cut(s) | 299, 767 |
| MvnI | CGCG | 2 cut(s) | 177, 1282 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 122, 453, 908, 977 |
| NciI | CCSGG | 2 cut(s) | 841, 1146 |
| NdeII | GATC | 3 cut(s) | 285, 427, 584 |
| NlaIII | CATG | 7 cut(s) | 138, 581, 755, 853, 1049, 1369, 1402 |
| NlaIV | GGNNCC | 3 cut(s) | 401, 838, 979 |
| NmuCI | GTSAC | 2 cut(s) | 820, 1406 |
| OliI | CACNNNNGTG | 2 cut(s) | 111, 558 |
| PaqCI | CACCTGC | 1 cut(s) | 893 |
| PceI | AGGCCT | 1 cut(s) | 1335 |
| PciSI | GCTCTTC | 3 cut(s) | 156, 186, 210 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 174 |
| PctI | GAATGC | 2 cut(s) | 299, 767 |
| PfeI | GAWTC | 3 cut(s) | 131, 338, 358 |
| PfoI | TCCNGGA | 1 cut(s) | 839 |
| PleI | GAGTC | 1 cut(s) | 346 |
| PpsI | GAGTC | 1 cut(s) | 346 |
| Ppu21I | YACGTR | 1 cut(s) | 22 |
| PsiI | TTATAA | 1 cut(s) | 42 |
| Psp124BI | GAGCTC | 2 cut(s) | 696, 740 |
| Psp1406I | AACGTT | 1 cut(s) | 1543 |
| PspN4I | GGNNCC | 3 cut(s) | 401, 838, 979 |
| PspPI | GGNCC | 2 cut(s) | 446, 483 |
| PstI | CTGCAG | 1 cut(s) | 1132 |
| PsuI | RGATCY | 1 cut(s) | 427 |
| RsaI | GTAC | 4 cut(s) | 24, 401, 516, 941 |
| RsaNI | GTAC | 4 cut(s) | 23, 400, 515, 940 |
| RseI | CAYNNNNRTG | 3 cut(s) | 111, 558, 1322 |
| SacI | GAGCTC | 2 cut(s) | 696, 740 |
| SapI | GCTCTTC | 3 cut(s) | 156, 186, 210 |
| SaqAI | TTAA | 4 cut(s) | 11, 617, 990, 1184 |
| Sau3AI | GATC | 3 cut(s) | 285, 427, 584 |
| Sau96I | GGNCC | 2 cut(s) | 446, 483 |
| ScaI | AGTACT | 1 cut(s) | 516 |
| SchI | GAGTC | 1 cut(s) | 346 |
| ScrFI | CCNGG | 2 cut(s) | 841, 1146 |
| SduI | GDGCHC | 3 cut(s) | 696, 740, 1105 |
| SfaNI | GCATC | 5 cut(s) | 46, 1210, 1248, 1278, 1461 |
| SfcI | CTRYAG | 1 cut(s) | 1128 |
| SmiI | ATTTAAAT | 1 cut(s) | 618 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 111, 558, 1322 |
| SnaBI | TACGTA | 1 cut(s) | 22 |
| SseBI | AGGCCT | 1 cut(s) | 1335 |
| SsiI | CCGC | 3 cut(s) | 67, 453, 635 |
| SspI | AATATT | 3 cut(s) | 614, 1434, 1524 |
| SspMI | CTAG | 4 cut(s) | 668, 854, 1014, 1446 |
| SstI | GAGCTC | 2 cut(s) | 696, 740 |
| StuI | AGGCCT | 1 cut(s) | 1335 |
| StyD4I | CCNGG | 2 cut(s) | 839, 1144 |
| StyI | CCWWGG | 2 cut(s) | 47, 722 |
| SwaI | ATTTAAAT | 1 cut(s) | 618 |
| TaaI | ACNGT | 3 cut(s) | 34, 661, 1141 |
| TaiI | ACGT | 2 cut(s) | 24, 1546 |
| TaqI | TCGA | 4 cut(s) | 54, 423, 524, 583 |
| TatI | WGTACW | 1 cut(s) | 514 |
| TauI | GCSGC | 1 cut(s) | 456 |
| TfiI | GAWTC | 3 cut(s) | 131, 338, 358 |
| Tru1I | TTAA | 4 cut(s) | 11, 617, 990, 1184 |
| Tru9I | TTAA | 4 cut(s) | 11, 617, 990, 1184 |
| TscAI | CASTG | 2 cut(s) | 118, 1105 |
| TseFI | GTSAC | 2 cut(s) | 820, 1406 |
| Tsp45I | GTSAC | 2 cut(s) | 820, 1406 |
| TspDTI | ATGAA | 6 cut(s) | 6, 123, 737, 1082, 1203, 1339 |
| TspGWI | ACGGA | 3 cut(s) | 143, 227, 1345 |
| TspRI | CASTG | 2 cut(s) | 118, 1105 |
| XapI | RAATTY | 2 cut(s) | 594, 639 |
| XmiI | GTMKAC | 2 cut(s) | 792, 1505 |
| XspI | CTAG | 4 cut(s) | 668, 854, 1014, 1446 |
| ZrmI | AGTACT | 1 cut(s) | 516 |