Rw7G018180

Domain of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000027
Physical Location & Seq
Reverse (-)
19420489 .. 19444005
23517 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G018180.1

Sequence Viewer

Length: 2493 bp
ATGGAAAGTTCCATAGTTGCACCAAGTGCCATTGTTCTTGAACTTCTAAACATGGATAACTATGAGTATTGGAGTCGTTGGGTTAAGACCTACTTGTTAGCTGAGGGTCTTTGGAAGGTTGTTGAAGCCCCCGGTGATCCTCCTAAACTAGAAGATGGTGAAGAAAAACTTGATGCTTGGAGTAGGCAGAATGCAAAAGCTCTACATGTAATTCATATTTCTTGTGGGTCTGGTCTTTTTCCACTTATCAGTGACACCGAGAGCGCCAGAGTTGCCTGGGATCTGTTGGCAAGAAAGTTGAGACCAGCCTGTCTCAAACCCACAGATGAGAGATCCGAGTTTCCCACCCCAACTGATGGTGCCAGGCGCACGCATGATGAAAACGTGGAAATAAAAGAAGAAGAAGTAGAAGGAACTGATGATGAGAGATCCGACTTTCCTACGCCAGTGGATGATGGCAGGCGTGTGCATGATGAAAATGTGGAAATAAAAGAAGAAGAAGAAGAAGCAACTGATGGAGGACATGAGAACAACGCCGCCAATGTCGCTCTTCATGTTGATTGGGATGAAGTAATGGAGTTTTTCAACCGACATCGGGAAGCAGTAAGAATAAGAGATCCAAAAACAGGCTACACAGGTCTTCACAAGGCAGTCTTCACTGGGGACGCAAAAGGGGTAGAGGAGATGGTGCGGTTGATGGAAGAAGAAGACTTGGAAATAAAAGACGGTAATGGTCGTACGGCCTTTTATTATGCGGTGAGGCTGCCATTGGGAAATATCAAAATAGTTGAATGCCTGGTCCGAAAGAATAACGCATTAGTCTCCACTTGCGTTGATGATTCTGCGTATAAAAATTTATATCCAGCTCTCGTAGCTTTATCGCACAACAATTTTGAGGTGGCTGACTATCTATATCGTCTAACTCCAAAGGAATCTCTGAAGCCAGAGAACGGTCCGAATGGCGCTGATATTATTACCAGCTGTCTTCAGAGGAAAAAATTTGATATTGCATTGGATTTAATTCAGCGTTATCCAAAGCTGGCCATCACTAAAGACTTCGACGGGAATTGTCCTTTAAATTTGTTAGCTGGCATGCGCTCTGCATTCTTAAGTGGAACACCGATGACTTTCTATCAACGATGGATATATCATTGTATACACATAGAGGATTTTACCAGTTTTGATGCTTGTATAGATGTTCTAACACCGGAAATTGATGAAGAGAATCAAATGGATCTGAATGAGTCAGCAATGGGAAGGCACGTGAAGTTGCCCTTGTGGCAACATATTCGGACCCATTGCAATGTAGTTAGGAGTTTTTTCCAAGAACTTCTTGTGACTCTCCTTAAACTATTGGGAATATTCGATCACATATATGAAATGAAATTGGTCCATGTTCGGGTTCTTCAACTTCTAAAATGCATGTCTGAAGTGACAAGATGTGATGATATTGGACAGTTGCATGATAGTGTGGTGCTAAGAGCAATCTTCCGGGCCATACAGTATGGCCACGTTGAGTTTGTTACTGTTCTATTTACGCAAAATCCATATGTTATGCCCATATGTGATAAAAGAGGCAGGAACTTCTTTACATTTGCCATTGAATGTCGTCAAGAAAAGGTTTATAACCTTATATATGATTTGGCGGATGAATCATTTATAAATTCCACCACAACCACGGTAGATCACTTTATGAACTCTATGCTACATATAGCAGGGACTTTATCATCTTCAACACAGTTTAATCATATTCGAGATGCAGCTCTACAAATGCAAAGAGAATTACAATGGTTCAAGGAGGTGGAGAATTTGGTATCTCCCGGTCTACATGAGCTTGTAAACTTAGCAGACAACATGACAGGACGTGAATTATTTACCAAGAATCACAAGGAAATGGTAAAGGAGGGAGAAAAATCGATGAAAGAGACAGCAAGTTCTTGTACAGTTGTGGGTGCTCTCATTATTACCATAATGTTTGCTGCAGCATTTACAGTTGCCGGCGGCAATAACCAAAATACAGGCCTTCCAATGTTTTTAGATGACAGATTGTTTATGGTGTTTATAGTCTCAGATGCTCTATCGCTCTTTGCTTCCACAACTTCAGTAATGATCTTTTTGGGTATCTTGACGTCACGCTATGCAGAAAACGATTTCCTTACATCTTTGCCTACAAAGATGATGGTAGGCCTTTTGACTCTGTTTTTATCTATTGCCACCATGATGGTTGCGTTTTCGACTACTCTAATCATTATGCTCCACGACAAATATTCATGGATTGTTGTTCCAATCATTTCGCTTGCTTGCATTCCAATCACCTCATTTGTATGGATGCAATTCCCTTTACTTAAAGAGATTTGTGTTTCAACTTATGGACCTGGAATATTTGGCAAGAGACGTAGCCTTTCCCGGAGGCACAGATTGAAGATGTTCTATGCAAGGATGAAAGGAAAAGTTGTGAGAGCATTTAGCCTTACGTCGAAGAACAAAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 DUF4219 PGG

Protein Analysis

830

Amino Acids

94.42

Weight (kDa)

5.6

Isoelectric Point (pI)

43.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_2 PF14223 29 - 97 3.9e-07 gag-polypeptide of LTR copia-type
PGG PF13962 638 - 750 5.5e-23 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000027)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18670 AT3G18670 AT3G54065
fragaria_vesca FvH4_1g26570 FvH4_1g26570 FvH4_5g19270 FvH4_5g19273 FvH4_5g35840 FvH4_5g36340 FvH4_5g36630 FvH4_5g37181 FvH4_5g37182 FvH4_5g37185 FvH4_5g37240 FvH4_5g37260 FvH4_6g21440 FvH4_6g44571 FvH4_6g44572 FvH4_6g44610 FvH4_6g44620 FvH4_6g44650 FvH4_6g44660 FvH4_6g45151 FvH4_6g45152 FvH4_6g45152 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45154 FvH4_6g51440 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090
malus_domestica MD00G1010300.v1.1 MD00G1010400.v1.1 MD00G1010500.v1.1 MD00G1011000.v1.1 MD00G1011200.v1.1 MD00G1011500.v1.1 MD00G1011900.v1.1 MD03G1133900.v1.1 MD03G1134100.v1.1 MD09G1086300.v1.1 MD09G1086500.v1.1 MD09G1086900.v1.1 MD09G1087000.v1.1 MD09G1088000.v1.1 MD09G1088100.v1.1 MD09G1088200.v1.1 MD09G1088300.v1.1 MD09G1089000.v1.1 MD09G1089300.v1.1 MD09G1133800.v1.1 MD16G1219400.v1.1 MD17G1027900.v1.1 MD17G1028400.v1.1 MD17G1028600.v1.1 MD17G1028700.v1.1 MD17G1028900.v1.1 MD17G1029000.v1.1 MD17G1029100.v1.1 MD17G1029200.v1.1 MD17G1075400.v1.1 MD17G1076000.v1.1 MD17G1077000.v1.1 MD17G1077100.v1.1 MD17G1077800.v1.1 MD17G1078000.v1.1 MD17G1078100.v1.1 MD17G1078300.v1.1 MD17G1100900.v1.1 MD17G1101100.v1.1 MD17G1101400.v1.1 MD17G1104200.v1.1 MD17G1104500.v1.1 MD17G1121300.v1.1 MD17G1121600.v1.1 MD17G1121900.v1.1 MD17G1122700.v1.1 MD17G1218800.v1.1
prunus_persica Prupe.2G033800_v2.0.a1 Prupe.2G033900_v2.0.a1 Prupe.2G080300_v2.0.a1 Prupe.2G080700_v2.0.a1 Prupe.2G080900_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G082000_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082200_v2.0.a1 Prupe.2G082300_v2.0.a1 Prupe.2G082700_v2.0.a1 Prupe.2G082800_v2.0.a1 Prupe.2G082900_v2.0.a1 Prupe.3G235600_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236800_v2.0.a1 Prupe.3G237000_v2.0.a1 Prupe.3G237100_v2.0.a1 Prupe.3G237300_v2.0.a1 Prupe.3G237400_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.4G282500_v2.0.a1 Prupe.4G282500_v2.0.a1
pyrus_communis pycom03g08990 pycom03g09000 pycom09g01180 pycom09g01190 pycom09g01220 pycom09g01230 pycom09g01360 pycom09g01370 pycom09g01380 pycom09g01410 pycom09g05500 pycom11g10280 pycom11g10290 pycom11g10310 pycom16g18270 pycom16g18280 pycom17g02280 pycom17g02290 pycom17g02300 pycom17g02360 pycom17g02390 pycom17g02410 pycom17g02440 pycom17g02460 pycom17g02470 pycom17g02480 pycom17g02510 pycom17g02530 pycom17g02540 pycom17g02550 pycom17g02560 pycom17g02570 pycom17g02580 pycom17g02630 pycom17g02640 pycom17g04970 pycom17g04980 pycom17g05010 pycom17g07090 pycom17g07620 pycom17g07630 pycom17g07640 pycom17g07650 pycom17g07660 pycom17g07740 pycom17g07760 pycom17g07770 pycom17g09580 pycom17g11170 pycom17g11200 pycom17g11220 pycom17g11240 pycom17g11250 pycom17g11300 pycom17g11340 pycom17g11380 pycom17g11440
rosa_chinensis RchiOBHm_Chr1g0332901 RchiOBHm_Chr1g0338981 RchiOBHm_Chr1g0338991 RchiOBHm_Chr1g0341201 RchiOBHm_Chr1g0341211 RchiOBHm_Chr1g0342721 RchiOBHm_Chr1g0343191 RchiOBHm_Chr2g0146761 RchiOBHm_Chr2g0161791 RchiOBHm_Chr2g0161801 RchiOBHm_Chr2g0161841 RchiOBHm_Chr2g0162041 RchiOBHm_Chr2g0162651 RchiOBHm_Chr2g0162691 RchiOBHm_Chr2g0162701 RchiOBHm_Chr2g0162711 RchiOBHm_Chr2g0162721 RchiOBHm_Chr2g0162811 RchiOBHm_Chr2g0162831 RchiOBHm_Chr2g0162841 RchiOBHm_Chr4g0416381 RchiOBHm_Chr4g0416391 RchiOBHm_Chr5g0075981 RchiOBHm_Chr6g0276101 RchiOBHm_Chr7g0214581 RchiOBHm_Chr7g0214631 RchiOBHm_Chr7g0214651 RchiOBHm_Chr7g0214721 RchiOBHm_Chr7g0223161 RchiOBHm_Chr7g0230661 RchiOBHm_Chr7g0230751 RchiOBHm_Chr7g0230781 RchiOBHm_Chr7g0234581 RchiOBHm_Chr7g0234601 RchiOBHm_Chr7g0237561 RchiOBHm_Chr7g0237571 RchiOBHm_Chr7g0238781 RchiOBHm_Chr7g0238811 RchiOBHm_Chr7g0242161 RchiOBHm_Chr7g0242401 RchiOBHm_Chr7g0242451 RchiOBHm_Chr7g0242921 RchiOBHm_Chr7g0242981 RchiOBHm_Chr7g0243111 RchiOBHm_Chr7g0243251 RchiOBHm_Chr7g0243331
rosa_laevigata RLG00000000803 RLG00000000807 RLG00000000809 RLG00000000811 RLG00000000814 RLG00000000854 RLG00000000859 RLG00000000864 RLG00000000994 RLG00000000995 RLG00000001458 RLG00000001461 RLG00000001474 RLG00000001476 RLG00000002729 RLG00000002730 RLG00000003505 RLG00000008871 RLG00000008873 RLG00000018513 RLG00000021300 RLG00000021303 RLG00000021318 RLG00000021356 RLG00000021357 RLG00000029070 RLG00000029071 RLG00000029171 RLG00000029189 RLG00000029190 RLG00000029640 RLG00000034635
rosa_multiflora Rmu_co8149086.1_g000001 Rmu_co8460577.1_g000001 Rmu_sc0000429.1_g000062 Rmu_sc0000429.1_g000071 Rmu_sc0000429.1_g000081 Rmu_sc0000863.1_g000020 Rmu_sc0001488.1_g000011 Rmu_sc0001545.1_g000007 Rmu_sc0001849.1_g000068 Rmu_sc0001993.1_g000003 Rmu_sc0002222.1_g000002 Rmu_sc0002308.1_g000053 Rmu_sc0002308.1_g000069 Rmu_sc0002480.1_g000007 Rmu_sc0003179.1_g000041 Rmu_sc0004213.1_g000011 Rmu_sc0007101.1_g000012 Rmu_sc0008565.1_g000011 Rmu_sc0009298.1_g000003 Rmu_sc0010407.1_g000009 Rmu_sc0010407.1_g000013 Rmu_sc0026966.1_g000004 Rmu_ssc0000152.1_g000012 Rmu_ssc0000152.1_g000014 Rmu_ssc0000295.1_g000021 Rmu_ssc0000295.1_g000026
rosa_roxburghii Rroxscaffold_1G00029600 Rroxscaffold_2G00087790 Rroxscaffold_2G00087800 Rroxscaffold_2G00088360 Rroxscaffold_2G00088500 Rroxscaffold_2G00088530 Rroxscaffold_2G00088590 Rroxscaffold_3G00221570 Rroxscaffold_3G00222190 Rroxscaffold_3G00222240 Rroxscaffold_3G00222880 Rroxscaffold_3G00222900 Rroxscaffold_3G00223990 Rroxscaffold_3G00229750 Rroxscaffold_3G00229760 Rroxscaffold_3G00245140 Rroxscaffold_3G00245150 Rroxscaffold_3G00245200 Rroxscaffold_3G00253520 Rroxscaffold_3G00253530 Rroxscaffold_4G00294500 Rroxscaffold_4G00311800 Rroxscaffold_4G00311830 Rroxscaffold_4G00311850 Rroxscaffold_4G00313180 Rroxscaffold_4G00313210 Rroxscaffold_4G00316270 Rroxscaffold_4G00317910 Rroxscaffold_4G00317920 Rroxscaffold_5G00349290 Rroxscaffold_5G00349300 Rroxscaffold_5G00349310 Rroxscaffold_5G00351950 Rroxscaffold_5G00351960 Rroxscaffold_5G00353390 Rroxscaffold_7G00192540
rosa_rugosa Rorug01G0102500 Rorug01G0102600 Rorug01G0146400.1 Rorug01G0146500.1 Rorug01G0159400.1 Rorug01G0159500.1 Rorug02G0491900 Rorug02G0492000 Rorug02G0492100 Rorug02G0492200 Rorug02G0492300 Rorug02G0492400 Rorug02G0492500 Rorug02G0492700 Rorug02G0498500 Rorug02G0498600 Rorug02G0498800 Rorug04G0006900 Rorug04G0053700 Rorug06G0002000 Rorug06G0002100 Rorug07G0304700 Rorug07G0304800 Rorug07G0304800 Rorug07G0304800 Rorug07G0305300 Rorug07G0305400 Rorug07G0305500 Rorug07G0305500 Rorug07G0318300 Rorug07G0318600 Rorug07G0323600
rosa_samantha Rh1AG128900 Rh1AG162500 Rh1AG163000 Rh1AG164000 Rh1AG164700 Rh1AG173200 Rh1AG173300 Rh1AG173800 Rh1BG098100 Rh1BG129800 Rh1BG130600 Rh1BG141300 Rh1BG141500 Rh1BG141600 Rh1CG122700 Rh1CG151900 Rh1CG152400 Rh1CG153100 Rh1CG153500 Rh1CG161400 Rh1CG161600 Rh1DG134200 Rh1DG173500 Rh1DG173700 Rh2AG558100 Rh2AG558500 Rh2AG560200 Rh2AG564700 Rh2AG564800 Rh2BG465600 Rh2BG571700 Rh2BG572000 Rh2BG573500 Rh2CG439800 Rh2CG541800 Rh2CG542100 Rh2CG542200 Rh2CG543800 Rh2CG547300 Rh2DG474700 Rh2DG580600 Rh2DG580900 Rh2DG581200 Rh2DG581700 Rh2DG581800 Rh2DG583500 Rh2DG587200 Rh2DG587300 Rh2DG587400 Rh4AG128900 Rh4AG203800 Rh4AG319900 Rh4AG320000 Rh4BG122200 Rh4BG201100 Rh4CG136000 Rh4DG122400 Rh4DG201100 Rh4DG323600 Rh6BG077000 Rh6DG206200 Rh7AG282300 Rh7AG282500 Rh7AG283400 Rh7AG358600 Rh7AG414500 Rh7AG415200 Rh7AG415500 Rh7AG461700 Rh7AG469300 Rh7AG477800 Rh7BG273900 Rh7BG274000 Rh7BG390400 Rh7BG390500 Rh7BG391500 Rh7BG391800 Rh7BG408300 Rh7BG432000 Rh7BG439200 Rh7BG449200 Rh7BG449900 Rh7BG450400 Rh7BG450500 Rh7CG220900 Rh7CG301600 Rh7CG302700 Rh7CG377000 Rh7CG433900 Rh7CG434200 Rh7CG478800 Rh7DG286200 Rh7DG354000 Rh7DG424600 Rh7DG448000 Rh7DG462800 Rh7DG462900
rosa_wichuraiana Rw0G003440 Rw0G011970 Rw0G017120 Rw0G017130 Rw0G017140 Rw0G018470 Rw0G018480 Rw0G020440 Rw1G010470 Rw2G046180 Rw2G046210 Rw2G046230 Rw2G046390 Rw2G046400 Rw2G046710 Rw2G046720 Rw2G046730 Rw3G025310 Rw4G010410 Rw4G017250 Rw6G018270 Rw7G018180 Rw7G024130 Rw7G024160 Rw7G024170 Rw7G034060 Rw7G034250 Rw7G034260 Rw7G034400 Rw7G034410 Rw7G038210 Rw7G039020 Rw7G039060 Rw7G039280 Rw7G039400 Rw7G039470 Rw7G039880 Rw7G039890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1626, 1661
AasI GACNNNNNNGTC 1 cut(s) 309
AatII GACGTC 1 cut(s) 2132
AccB1I GGYRCC 1 cut(s) 359
AccB7I CCANNNNNTGG 1 cut(s) 356
AccI GTMKAC 2 cut(s) 1156, 1825
AciI CCGC 5 cut(s) 537, 691, 755, 1646, 2001
AclWI GGATC 6 cut(s) 131, 288, 327, 423, 611, 1242
AcoI YGGCCR 2 cut(s) 1041, 1507
AcsI RAATTY 5 cut(s) 853, 998, 1078, 1663, 1807
AcuI CTGAAG 4 cut(s) 959, 971, 1449, 2085
AcvI CACGTG 1 cut(s) 1264
AcyI GRCGYC 1 cut(s) 2129
AdeI CACNNNGTG 1 cut(s) 26
AfaI GTAC 2 cut(s) 739, 1942
AfiI CCNNNNNNNGG 5 cut(s) 356, 595, 626, 950, 1399
AflII CTTAAG 1 cut(s) 1108
AflIII ACRYGT 1 cut(s) 205
AjiI CACGTC 1 cut(s) 1865
AjnI CCWGG 4 cut(s) 275, 362, 795, 2374
AluBI AGCT 9 cut(s) 101, 200, 866, 875, 981, 1039, 1088, 1763, 1834
AluI AGCT 9 cut(s) 101, 200, 866, 875, 981, 1039, 1088, 1763, 1834
Alw21I GWGCWC 1 cut(s) 1957
Alw26I GTCTC 6 cut(s) 295, 317, 826, 1919, 2071, 2386
AlwI GGATC 6 cut(s) 131, 288, 327, 423, 611, 1242
AoxI GGCC 6 cut(s) 741, 1041, 1494, 1507, 2020, 2185
ApeKI GCWGC 4 cut(s) 763, 1760, 1979, 1982
ApoI RAATTY 5 cut(s) 853, 998, 1078, 1663, 1807
Asp700I GAANNNNTTC 1 cut(s) 2426
AspLEI GCGC 4 cut(s) 266, 369, 965, 1098
AspS9I GGNCC 6 cut(s) 799, 953, 1293, 1390, 1494, 2372
AsuC2I CCSGG 4 cut(s) 132, 1493, 1821, 2407
AsuHPI GGTGA 4 cut(s) 146, 170, 769, 2305
AvaII GGWCC 5 cut(s) 799, 953, 1293, 1390, 2372
BalI TGGCCA 2 cut(s) 1043, 1509
BanI GGYRCC 1 cut(s) 359
BbrPI CACGTG 1 cut(s) 1264
BbsI GAAGAC 4 cut(s) 632, 646, 714, 977
Bbv12I GWGCWC 1 cut(s) 1957
BbvCI CCTCAGC 1 cut(s) 102
BbvI GCAGC 4 cut(s) 750, 1772, 1966, 1994
BceAI ACGGC 1 cut(s) 756
BcgI CGANNNNNNTGC 2 cut(s) 1271, 1305
BciT130I CCWGG 4 cut(s) 277, 364, 797, 2376
BcnI CCSGG 4 cut(s) 132, 1493, 1821, 2407
BcoDI GTCTC 6 cut(s) 295, 317, 826, 1919, 2071, 2386
BfaI CTAG 1 cut(s) 149
BfmI CTRYAG 1 cut(s) 1980
BfoI RGCGCY 2 cut(s) 267, 966
BfrI CTTAAG 1 cut(s) 1108
BglI GCCNNNNNGGC 1 cut(s) 1279
BisI GCNGC 6 cut(s) 537, 764, 1761, 1980, 1983, 2002
BlsI GCNGC 6 cut(s) 538, 765, 1762, 1981, 1984, 2003
Bme1390I CCNGG 8 cut(s) 132, 277, 364, 797, 1493, 1821, 2376, 2407
Bme18I GGWCC 5 cut(s) 799, 953, 1293, 1390, 2372
BmgBI CACGTC 1 cut(s) 1865
BmgT120I GGNCC 6 cut(s) 799, 953, 1293, 1390, 1494, 2372
BmiI GGNNCC 2 cut(s) 361, 1295
BmrFI CCNGG 8 cut(s) 132, 277, 364, 797, 1493, 1821, 2376, 2407
BmrI ACTGGG 1 cut(s) 669
BmsI GCATC 5 cut(s) 163, 1174, 1747, 2062, 2319
BmuI ACTGGG 1 cut(s) 669
BpiI GAAGAC 4 cut(s) 632, 646, 714, 977
Bpu10I CCTNAGC 1 cut(s) 102
BpuMI CCSGG 4 cut(s) 132, 1493, 1821, 2407
Bsa29I ATCGAT 1 cut(s) 1916
BsaAI YACGTR 1 cut(s) 1264
BsaHI GRCGYC 1 cut(s) 2129
BsaI GGTCTC 1 cut(s) 295
BsaJI CCNNGG 3 cut(s) 130, 276, 1677
BsaWI WCCGGW 1 cut(s) 1207
Bsc4I CCNNNNNNNGG 5 cut(s) 356, 595, 626, 950, 1399
Bse118I RCCGGY 1 cut(s) 1997
Bse1I ACTGG 3 cut(s) 446, 664, 1176
Bse3DI GCAATG 3 cut(s) 1257, 1297, 1309
BseBI CCWGG 4 cut(s) 277, 364, 797, 2376
BseCI ATCGAT 1 cut(s) 1916
BseDI CCNNGG 3 cut(s) 130, 276, 1677
BseGI GGATG 5 cut(s) 457, 571, 1654, 2334, 2445
BseLI CCNNNNNNNGG 5 cut(s) 356, 595, 626, 950, 1399
BseMI GCAATG 3 cut(s) 1257, 1297, 1309
BseMII CTCAG 2 cut(s) 93, 2082
BseNI ACTGG 3 cut(s) 446, 664, 1176
BseRI GAGGAG 1 cut(s) 695
BseXI GCAGC 4 cut(s) 750, 1772, 1966, 1994
BshFI GGCC 6 cut(s) 743, 1043, 1496, 1509, 2022, 2187
BshNI GGYRCC 1 cut(s) 359
BshVI ATCGAT 1 cut(s) 1916
BsiHKAI GWGCWC 1 cut(s) 1957
BsiSI CCGG 6 cut(s) 132, 1208, 1492, 1821, 1998, 2407
BsiWI CGTACG 1 cut(s) 737
BslFI GGGAC 2 cut(s) 677, 1732
BslI CCNNNNNNNGG 5 cut(s) 356, 595, 626, 950, 1399
BsmAI GTCTC 6 cut(s) 295, 317, 826, 1919, 2071, 2386
BsmBI CGTCTC 1 cut(s) 2386
BsmFI GGGAC 2 cut(s) 677, 1732
BsmI GAATGC 4 cut(s) 196, 797, 1103, 2304
BsnI GGCC 6 cut(s) 743, 1043, 1496, 1509, 2022, 2187
Bso31I GGTCTC 1 cut(s) 295
Bsp1286I GDGCHC 1 cut(s) 1957
Bsp1407I TGTACA 1 cut(s) 1940
Bsp143I GATC 9 cut(s) 136, 280, 332, 428, 616, 1234, 1366, 1684, 2109
BspACI CCGC 5 cut(s) 537, 691, 755, 1646, 2001
BspANI GGCC 6 cut(s) 743, 1043, 1496, 1509, 2022, 2187
BspCNI CTCAG 2 cut(s) 94, 2081
BspDI ATCGAT 1 cut(s) 1916
BspLI GGNNCC 2 cut(s) 361, 1295
BspMAI CTGCAG 1 cut(s) 1984
BspPI GGATC 6 cut(s) 131, 288, 327, 423, 611, 1242
BspQI GCTCTTC 1 cut(s) 555
BspT107I GGYRCC 1 cut(s) 359
BspTI CTTAAG 1 cut(s) 1108
BspTNI GGTCTC 1 cut(s) 295
BsrDI GCAATG 3 cut(s) 1257, 1297, 1309
BsrFI RCCGGY 1 cut(s) 1997
BsrGI TGTACA 1 cut(s) 1940
BsrI ACTGG 3 cut(s) 446, 664, 1176
BssAI RCCGGY 1 cut(s) 1997
BssECI CCNNGG 3 cut(s) 130, 276, 1677
BssMI GATC 9 cut(s) 136, 280, 332, 428, 616, 1234, 1366, 1684, 2109
BssNAI GTATAC 1 cut(s) 1157
BssNI GRCGYC 1 cut(s) 2129
Bst1107I GTATAC 1 cut(s) 1157
Bst2UI CCWGG 4 cut(s) 277, 364, 797, 2376
Bst4CI ACNGT 9 cut(s) 728, 953, 1458, 1503, 1528, 1681, 1740, 1945, 1993
Bst6I CTCTTC 2 cut(s) 555, 1215
BstACI GRCGYC 1 cut(s) 2129
BstAFI CTTAAG 1 cut(s) 1108
BstAPI GCANNNNNTGC 1 cut(s) 26
BstAUI TGTACA 1 cut(s) 1940
BstBAI YACGTR 1 cut(s) 1264
BstC8I GCNNGC 8 cut(s) 371, 461, 1041, 1090, 1094, 1999, 2298, 2302
BstDEI CTNAG 4 cut(s) 102, 1478, 1843, 2068
BstDSI CCRYGG 1 cut(s) 1677
BstF5I GGATG 5 cut(s) 457, 571, 1654, 2334, 2445
BstH2I RGCGCY 2 cut(s) 267, 966
BstHHI GCGC 4 cut(s) 266, 369, 965, 1098
BstKTI GATC 9 cut(s) 139, 283, 335, 431, 619, 1237, 1369, 1687, 2112
BstMAI GTCTC 6 cut(s) 295, 317, 826, 1919, 2071, 2386
BstMBI GATC 9 cut(s) 136, 280, 332, 428, 616, 1234, 1366, 1684, 2109
BstMWI GCNNNNNNNGC 5 cut(s) 26, 272, 545, 872, 1279
BstNI CCWGG 4 cut(s) 277, 364, 797, 2376
BstNSI RCATGY 3 cut(s) 209, 1096, 1426
BstSCI CCNGG 8 cut(s) 130, 275, 362, 795, 1491, 1819, 2374, 2405
BstSFI CTRYAG 1 cut(s) 1980
BstV1I GCAGC 4 cut(s) 750, 1772, 1966, 1994
BstV2I GAAGAC 4 cut(s) 632, 646, 714, 977
BstX2I RGATCY 5 cut(s) 280, 332, 428, 616, 1234
BstXI CCANNNNNNTGG 1 cut(s) 2221
BstYI RGATCY 5 cut(s) 280, 332, 428, 616, 1234
BstZ17I GTATAC 1 cut(s) 1157
Bsu15I ATCGAT 1 cut(s) 1916
BsuRI GGCC 6 cut(s) 743, 1043, 1496, 1509, 2022, 2187
BsuTUI ATCGAT 1 cut(s) 1916
BtgI CCRYGG 1 cut(s) 1677
BtrI CACGTC 1 cut(s) 1865
BtsCI GGATG 5 cut(s) 457, 571, 1654, 2334, 2445
BtsIMutI CAGTG 3 cut(s) 256, 453, 657
Cac8I GCNNGC 8 cut(s) 371, 461, 1041, 1090, 1094, 1999, 2298, 2302
CfoI GCGC 4 cut(s) 266, 369, 965, 1098
Cfr10I RCCGGY 1 cut(s) 1997
Cfr13I GGNCC 6 cut(s) 799, 953, 1293, 1390, 1494, 2372
ClaI ATCGAT 1 cut(s) 1916
CpoI CGGWCCG 1 cut(s) 953
CseI GACGC 1 cut(s) 674
Csp6I GTAC 2 cut(s) 738, 1941
CspCI CAANNNNNGTGG 2 cut(s) 814, 849
CspI CGGWCCG 1 cut(s) 953
CviQI GTAC 2 cut(s) 738, 1941
DdeI CTNAG 4 cut(s) 102, 1478, 1843, 2068
DpnI GATC 9 cut(s) 138, 282, 334, 430, 618, 1236, 1368, 1686, 2111
DpnII GATC 9 cut(s) 136, 280, 332, 428, 616, 1234, 1366, 1684, 2109
DraI TTTAAA 1 cut(s) 1077
DraIII CACNNNGTG 1 cut(s) 26
DrdI GACNNNNNNGTC 1 cut(s) 309
DseDI GACNNNNNNGTC 1 cut(s) 309
EaeI YGGCCR 2 cut(s) 1041, 1507
Eam1104I CTCTTC 2 cut(s) 555, 1215
EarI CTCTTC 2 cut(s) 555, 1215
EciI GGCGGA 1 cut(s) 1661
Eco147I AGGCCT 2 cut(s) 2022, 2187
Eco31I GGTCTC 1 cut(s) 295
Eco47I GGWCC 5 cut(s) 799, 953, 1293, 1390, 2372
Eco57I CTGAAG 4 cut(s) 959, 971, 1449, 2085
Eco72I CACGTG 1 cut(s) 1264
EcoRII CCWGG 4 cut(s) 275, 362, 795, 2374
EcoT22I ATGCAT 1 cut(s) 1424
Esp3I CGTCTC 1 cut(s) 2386
FaqI GGGAC 2 cut(s) 677, 1732
FauNDI CATATG 2 cut(s) 1549, 1562
FblI GTMKAC 2 cut(s) 1156, 1825
Fnu4HI GCNGC 6 cut(s) 537, 764, 1761, 1980, 1983, 2002
FokI GGATG 5 cut(s) 464, 578, 1661, 2341, 2452
Fsp4HI GCNGC 6 cut(s) 537, 764, 1761, 1980, 1983, 2002
FspBI CTAG 1 cut(s) 149
GlaI GCGC 4 cut(s) 265, 368, 964, 1097
GluI GCNGC 6 cut(s) 537, 764, 1761, 1980, 1983, 2002
HaeII RGCGCY 2 cut(s) 267, 966
HaeIII GGCC 6 cut(s) 743, 1043, 1496, 1509, 2022, 2187
HapII CCGG 6 cut(s) 132, 1208, 1492, 1821, 1998, 2407
HgaI GACGC 1 cut(s) 674
HhaI GCGC 4 cut(s) 266, 369, 965, 1098
Hin1I GRCGYC 1 cut(s) 2129
Hin6I GCGC 4 cut(s) 264, 367, 963, 1096
HinP1I GCGC 4 cut(s) 264, 367, 963, 1096
HinfI GANTC 9 cut(s) 73, 839, 932, 1225, 1244, 1339, 1652, 1882, 2194
HpaII CCGG 6 cut(s) 132, 1208, 1492, 1821, 1998, 2407
HphI GGTGA 4 cut(s) 146, 170, 769, 2305
Hpy166II GTNNAC 3 cut(s) 1157, 1826, 1840
Hpy188III TCNNGA 5 cut(s) 38, 596, 1613, 1754, 2125
Hpy8I GTNNAC 3 cut(s) 1157, 1826, 1840
Hpy99I CGWCG 2 cut(s) 1064, 2479
HpyAV CCTTC 4 cut(s) 109, 404, 1251, 2033
HpyCH4III ACNGT 9 cut(s) 728, 953, 1458, 1503, 1528, 1681, 1740, 1945, 1993
HpyCH4IV ACGT 7 cut(s) 384, 1263, 1512, 1864, 2129, 2395, 2474
HpyF10VI GCNNNNNNNGC 5 cut(s) 26, 272, 545, 872, 1279
HpyF3I CTNAG 4 cut(s) 102, 1478, 1843, 2068
HpySE526I ACGT 7 cut(s) 384, 1263, 1512, 1864, 2129, 2395, 2474
Hsp92I GRCGYC 1 cut(s) 2129
HspAI GCGC 4 cut(s) 264, 367, 963, 1096
KroI GCCGGC 1 cut(s) 1997
KroNI GCCGGC 1 cut(s) 1999
Kzo9I GATC 9 cut(s) 136, 280, 332, 428, 616, 1234, 1366, 1684, 2109
LguI GCTCTTC 1 cut(s) 555
LmnI GCTCC 1 cut(s) 2259
Lsp1109I GCAGC 4 cut(s) 750, 1772, 1966, 1994
LweI GCATC 5 cut(s) 163, 1174, 1747, 2062, 2319
MaeI CTAG 1 cut(s) 149
MaeII ACGT 7 cut(s) 384, 1263, 1512, 1864, 2129, 2395, 2474
MaeIII GTNAC 5 cut(s) 251, 1336, 1432, 1522, 2130
MalI GATC 9 cut(s) 138, 282, 334, 430, 618, 1236, 1368, 1686, 2111
MboI GATC 9 cut(s) 136, 280, 332, 428, 616, 1234, 1366, 1684, 2109
MflI RGATCY 5 cut(s) 280, 332, 428, 616, 1234
MhlI GDGCHC 1 cut(s) 1957
MlsI TGGCCA 2 cut(s) 1043, 1509
MluNI TGGCCA 2 cut(s) 1043, 1509
MlyI GAGTC 4 cut(s) 82, 1253, 1333, 2188
MmeI TCCRAC 1 cut(s) 456
Mox20I TGGCCA 2 cut(s) 1043, 1509
Mph1103I ATGCAT 1 cut(s) 1424
MroNI GCCGGC 1 cut(s) 1997
MroXI GAANNNNTTC 1 cut(s) 2426
MscI TGGCCA 2 cut(s) 1043, 1509
MseI TTAA 7 cut(s) 84, 1019, 1076, 1109, 1347, 1743, 2346
MslI CAYNNNNRTG 5 cut(s) 1302, 1374, 1467, 2219, 2323
Msp20I TGGCCA 2 cut(s) 1043, 1509
MspA1I CMGCKG 1 cut(s) 981
MspCI CTTAAG 1 cut(s) 1108
MspI CCGG 6 cut(s) 132, 1208, 1492, 1821, 1998, 2407
MspR9I CCNGG 8 cut(s) 132, 277, 364, 797, 1493, 1821, 2376, 2407
Mva1269I GAATGC 4 cut(s) 196, 797, 1103, 2304
MvaI CCWGG 4 cut(s) 277, 364, 797, 2376
MwoI GCNNNNNNNGC 5 cut(s) 26, 272, 545, 872, 1279
NaeI GCCGGC 1 cut(s) 1999
NciI CCSGG 4 cut(s) 132, 1493, 1821, 2407
NdeI CATATG 2 cut(s) 1549, 1562
NdeII GATC 9 cut(s) 136, 280, 332, 428, 616, 1234, 1366, 1684, 2109
NgoMIV GCCGGC 1 cut(s) 1997
NlaIV GGNNCC 2 cut(s) 361, 1295
NmuCI GTSAC 4 cut(s) 251, 1336, 1432, 2130
NsiI ATGCAT 1 cut(s) 1424
NspI RCATGY 3 cut(s) 209, 1096, 1426
PaeI GCATGC 1 cut(s) 1096
PceI AGGCCT 2 cut(s) 2022, 2187
PciI ACATGT 1 cut(s) 205
PciSI GCTCTTC 1 cut(s) 555
PctI GAATGC 4 cut(s) 196, 797, 1103, 2304
PdiI GCCGGC 1 cut(s) 1999
PdmI GAANNNNTTC 1 cut(s) 2426
PfeI GAWTC 5 cut(s) 839, 932, 1225, 1652, 1882
Pfl23II CGTACG 1 cut(s) 737
PflMI CCANNNNNTGG 1 cut(s) 356
PfoI TCCNGGA 1 cut(s) 2405
PkrI GCNGC 6 cut(s) 538, 765, 1762, 1981, 1984, 2003
PleI GAGTC 4 cut(s) 81, 1252, 1333, 2188
PmaCI CACGTG 1 cut(s) 1264
PmlI CACGTG 1 cut(s) 1264
PpsI GAGTC 4 cut(s) 81, 1252, 1333, 2188
Ppu21I YACGTR 1 cut(s) 1264
PscI ACATGT 1 cut(s) 205
PsiI TTATAA 2 cut(s) 1626, 1661
Psp6I CCWGG 4 cut(s) 275, 362, 795, 2374
PspCI CACGTG 1 cut(s) 1264
PspGI CCWGG 4 cut(s) 275, 362, 795, 2374
PspLI CGTACG 1 cut(s) 737
PspN4I GGNNCC 2 cut(s) 361, 1295
PspPI GGNCC 6 cut(s) 799, 953, 1293, 1390, 1494, 2372
PstI CTGCAG 1 cut(s) 1984
PsuI RGATCY 5 cut(s) 280, 332, 428, 616, 1234
PvuII CAGCTG 1 cut(s) 981
RsaI GTAC 2 cut(s) 739, 1942
RsaNI GTAC 2 cut(s) 738, 1941
RseI CAYNNNNRTG 5 cut(s) 1302, 1374, 1467, 2219, 2323
Rsr2I CGGWCCG 1 cut(s) 953
RsrII CGGWCCG 1 cut(s) 953
SapI GCTCTTC 1 cut(s) 555
SaqAI TTAA 7 cut(s) 84, 1019, 1076, 1109, 1347, 1743, 2346
SatI GCNGC 6 cut(s) 537, 764, 1761, 1980, 1983, 2002
Sau3AI GATC 9 cut(s) 136, 280, 332, 428, 616, 1234, 1366, 1684, 2109
Sau96I GGNCC 6 cut(s) 799, 953, 1293, 1390, 1494, 2372
SchI GAGTC 4 cut(s) 82, 1253, 1333, 2188
ScrFI CCNGG 8 cut(s) 132, 277, 364, 797, 1493, 1821, 2376, 2407
SduI GDGCHC 1 cut(s) 1957
SfaNI GCATC 5 cut(s) 163, 1174, 1747, 2062, 2319
SfcI CTRYAG 1 cut(s) 1980
SinI GGWCC 5 cut(s) 799, 953, 1293, 1390, 2372
SmiMI CAYNNNNRTG 5 cut(s) 1302, 1374, 1467, 2219, 2323
SmlI CTYRAG 1 cut(s) 1108
SmoI CTYRAG 1 cut(s) 1108
SphI GCATGC 1 cut(s) 1096
SseBI AGGCCT 2 cut(s) 2022, 2187
SsiI CCGC 5 cut(s) 537, 691, 755, 1646, 2001
SspI AATATT 3 cut(s) 1362, 2267, 2382
SspMI CTAG 1 cut(s) 149
StuI AGGCCT 2 cut(s) 2022, 2187
StyD4I CCNGG 8 cut(s) 130, 275, 362, 795, 1491, 1819, 2374, 2405
TaaI ACNGT 9 cut(s) 728, 953, 1458, 1503, 1528, 1681, 1740, 1945, 1993
TaiI ACGT 7 cut(s) 387, 1266, 1515, 1867, 2132, 2398, 2477
TaqI TCGA 6 cut(s) 1059, 1365, 1753, 1916, 2234, 2477
TatI WGTACW 1 cut(s) 1940
TauI GCSGC 2 cut(s) 539, 2004
TfiI GAWTC 5 cut(s) 839, 932, 1225, 1652, 1882
Tru1I TTAA 7 cut(s) 84, 1019, 1076, 1109, 1347, 1743, 2346
Tru9I TTAA 7 cut(s) 84, 1019, 1076, 1109, 1347, 1743, 2346
TscAI CASTG 3 cut(s) 256, 453, 664
TseFI GTSAC 4 cut(s) 251, 1336, 1432, 2130
TseI GCWGC 4 cut(s) 763, 1760, 1979, 1982
Tsp45I GTSAC 4 cut(s) 251, 1336, 1432, 2130
TspRI CASTG 3 cut(s) 256, 453, 664
Van91I CCANNNNNTGG 1 cut(s) 356
Vha464I CTTAAG 1 cut(s) 1108
VpaK11BI GGWCC 5 cut(s) 799, 953, 1293, 1390, 2372
XapI RAATTY 5 cut(s) 853, 998, 1078, 1663, 1807
XceI RCATGY 3 cut(s) 209, 1096, 1426
XmiI GTMKAC 2 cut(s) 1156, 1825
XmnI GAANNNNTTC 1 cut(s) 2426
XspI CTAG 1 cut(s) 149
ZraI GACGTC 1 cut(s) 2130
Zsp2I ATGCAT 1 cut(s) 1424
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.