protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 579 |
| AccII | CGCG | 1 cut(s) | 408 |
| AciI | CCGC | 4 cut(s) | 219, 401, 406, 408 |
| AclWI | GGATC | 2 cut(s) | 149, 692 |
| AcoI | YGGCCR | 1 cut(s) | 442 |
| AcsI | RAATTY | 1 cut(s) | 161 |
| AcuI | CTGAAG | 2 cut(s) | 123, 339 |
| AfaI | GTAC | 1 cut(s) | 366 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 418 |
| AgeI | ACCGGT | 1 cut(s) | 527 |
| AgsI | TTSAA | 4 cut(s) | 166, 295, 306, 517 |
| AjnI | CCWGG | 2 cut(s) | 188, 269 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 275, 307 |
| AluBI | AGCT | 4 cut(s) | 170, 345, 425, 494 |
| AluI | AGCT | 4 cut(s) | 170, 345, 425, 494 |
| Alw21I | GWGCWC | 1 cut(s) | 382 |
| AlwI | GGATC | 2 cut(s) | 149, 692 |
| AoxI | GGCC | 4 cut(s) | 192, 409, 442, 725 |
| ApeKI | GCWGC | 1 cut(s) | 5 |
| ApoI | RAATTY | 1 cut(s) | 161 |
| AsiGI | ACCGGT | 1 cut(s) | 527 |
| AspS9I | GGNCC | 2 cut(s) | 192, 403 |
| AsuHPI | GGTGA | 1 cut(s) | 94 |
| AvaII | GGWCC | 1 cut(s) | 403 |
| BalI | TGGCCA | 1 cut(s) | 444 |
| Bbv12I | GWGCWC | 1 cut(s) | 382 |
| BbvI | GCAGC | 1 cut(s) | 17 |
| BccI | CCATC | 2 cut(s) | 581, 725 |
| BceAI | ACGGC | 1 cut(s) | 273 |
| BciT130I | CCWGG | 2 cut(s) | 190, 271 |
| BciVI | GTATCC | 1 cut(s) | 619 |
| BfaI | CTAG | 3 cut(s) | 21, 617, 778 |
| BfuI | GTATCC | 1 cut(s) | 619 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 200 |
| BisI | GCNGC | 2 cut(s) | 6, 409 |
| BlsI | GCNGC | 2 cut(s) | 7, 410 |
| Bme1390I | CCNGG | 2 cut(s) | 190, 271 |
| Bme18I | GGWCC | 1 cut(s) | 403 |
| BmgT120I | GGNCC | 2 cut(s) | 192, 403 |
| BmrFI | CCNGG | 2 cut(s) | 190, 271 |
| BmsI | GCATC | 2 cut(s) | 217, 258 |
| BpmI | CTGGAG | 2 cut(s) | 325, 396 |
| BsaJI | CCNNGG | 2 cut(s) | 189, 406 |
| BsaWI | WCCGGW | 1 cut(s) | 527 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 418 |
| Bse118I | RCCGGY | 1 cut(s) | 527 |
| Bse1I | ACTGG | 2 cut(s) | 74, 511 |
| BseBI | CCWGG | 2 cut(s) | 190, 271 |
| BseDI | CCNNGG | 2 cut(s) | 189, 406 |
| BseGI | GGATG | 1 cut(s) | 232 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 418 |
| BseMII | CTCAG | 2 cut(s) | 222, 729 |
| BseNI | ACTGG | 2 cut(s) | 74, 511 |
| BseRI | GAGGAG | 1 cut(s) | 588 |
| BseXI | GCAGC | 1 cut(s) | 17 |
| Bsh1236I | CGCG | 1 cut(s) | 408 |
| BshFI | GGCC | 4 cut(s) | 194, 411, 444, 727 |
| BshTI | ACCGGT | 1 cut(s) | 527 |
| BsiHKAI | GWGCWC | 1 cut(s) | 382 |
| BsiSI | CCGG | 2 cut(s) | 528, 724 |
| BslFI | GGGAC | 2 cut(s) | 2, 128 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 418 |
| BsmFI | GGGAC | 2 cut(s) | 2, 128 |
| BsnI | GGCC | 4 cut(s) | 194, 411, 444, 727 |
| Bsp1286I | GDGCHC | 1 cut(s) | 382 |
| Bsp143I | GATC | 3 cut(s) | 154, 639, 697 |
| BspACI | CCGC | 4 cut(s) | 219, 401, 406, 408 |
| BspANI | GGCC | 4 cut(s) | 194, 411, 444, 727 |
| BspCNI | CTCAG | 2 cut(s) | 223, 730 |
| BspFNI | CGCG | 1 cut(s) | 408 |
| BspPI | GGATC | 2 cut(s) | 149, 692 |
| BspQI | GCTCTTC | 1 cut(s) | 501 |
| BsrFI | RCCGGY | 1 cut(s) | 527 |
| BsrI | ACTGG | 2 cut(s) | 74, 511 |
| BssAI | RCCGGY | 1 cut(s) | 527 |
| BssECI | CCNNGG | 2 cut(s) | 189, 406 |
| BssMI | GATC | 3 cut(s) | 154, 639, 697 |
| Bst2UI | CCWGG | 2 cut(s) | 190, 271 |
| Bst4CI | ACNGT | 5 cut(s) | 13, 291, 456, 549, 584 |
| Bst6I | CTCTTC | 1 cut(s) | 501 |
| BstC8I | GCNNGC | 2 cut(s) | 99, 201 |
| BstDEI | CTNAG | 4 cut(s) | 231, 502, 651, 738 |
| BstDSI | CCRYGG | 1 cut(s) | 406 |
| BstF5I | GGATG | 1 cut(s) | 232 |
| BstFNI | CGCG | 1 cut(s) | 408 |
| BstKTI | GATC | 3 cut(s) | 157, 642, 700 |
| BstMBI | GATC | 3 cut(s) | 154, 639, 697 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 200, 266 |
| BstNI | CCWGG | 2 cut(s) | 190, 271 |
| BstNSI | RCATGY | 1 cut(s) | 386 |
| BstSCI | CCNGG | 2 cut(s) | 188, 269 |
| BstUI | CGCG | 1 cut(s) | 408 |
| BstV1I | GCAGC | 1 cut(s) | 17 |
| BstX2I | RGATCY | 1 cut(s) | 154 |
| BstYI | RGATCY | 1 cut(s) | 154 |
| BsuI | GTATCC | 1 cut(s) | 619 |
| BsuRI | GGCC | 4 cut(s) | 194, 411, 444, 727 |
| BtgI | CCRYGG | 1 cut(s) | 406 |
| BtsCI | GGATG | 1 cut(s) | 232 |
| Cac8I | GCNNGC | 2 cut(s) | 99, 201 |
| Cfr10I | RCCGGY | 1 cut(s) | 527 |
| Cfr13I | GGNCC | 2 cut(s) | 192, 403 |
| Cfr42I | CCGCGG | 1 cut(s) | 409 |
| CpoI | CGGWCCG | 1 cut(s) | 403 |
| Csp6I | GTAC | 1 cut(s) | 365 |
| CspAI | ACCGGT | 1 cut(s) | 527 |
| CspI | CGGWCCG | 1 cut(s) | 403 |
| CviAII | CATG | 2 cut(s) | 383, 758 |
| CviQI | GTAC | 1 cut(s) | 365 |
| DdeI | CTNAG | 4 cut(s) | 231, 502, 651, 738 |
| DpnI | GATC | 3 cut(s) | 156, 641, 699 |
| DpnII | GATC | 3 cut(s) | 154, 639, 697 |
| EaeI | YGGCCR | 1 cut(s) | 442 |
| Eam1104I | CTCTTC | 1 cut(s) | 501 |
| EarI | CTCTTC | 1 cut(s) | 501 |
| Eco47I | GGWCC | 1 cut(s) | 403 |
| Eco57I | CTGAAG | 2 cut(s) | 123, 339 |
| EcoO109I | RGGNCCY | 1 cut(s) | 192 |
| EcoRI | GAATTC | 1 cut(s) | 161 |
| EcoRII | CCWGG | 2 cut(s) | 188, 269 |
| FaeI | CATG | 2 cut(s) | 386, 761 |
| FaqI | GGGAC | 2 cut(s) | 2, 128 |
| FatI | CATG | 2 cut(s) | 382, 757 |
| FauI | CCCGC | 1 cut(s) | 212 |
| FblI | GTMKAC | 1 cut(s) | 579 |
| Fnu4HI | GCNGC | 2 cut(s) | 6, 409 |
| FokI | GGATG | 1 cut(s) | 239 |
| Fsp4HI | GCNGC | 2 cut(s) | 6, 409 |
| FspBI | CTAG | 3 cut(s) | 21, 617, 778 |
| GluI | GCNGC | 2 cut(s) | 6, 409 |
| GsuI | CTGGAG | 2 cut(s) | 325, 396 |
| HaeIII | GGCC | 4 cut(s) | 194, 411, 444, 727 |
| HapII | CCGG | 2 cut(s) | 528, 724 |
| Hin1II | CATG | 2 cut(s) | 386, 761 |
| HincII | GTYRAC | 1 cut(s) | 325 |
| HindII | GTYRAC | 1 cut(s) | 325 |
| HindIII | AAGCTT | 1 cut(s) | 168 |
| HinfI | GANTC | 3 cut(s) | 233, 326, 761 |
| HpaII | CCGG | 2 cut(s) | 528, 724 |
| HphI | GGTGA | 1 cut(s) | 94 |
| Hpy166II | GTNNAC | 3 cut(s) | 325, 552, 580 |
| Hpy188I | TCNGA | 3 cut(s) | 319, 475, 739 |
| Hpy188III | TCNNGA | 3 cut(s) | 158, 253, 517 |
| Hpy8I | GTNNAC | 3 cut(s) | 325, 552, 580 |
| Hpy99I | CGWCG | 1 cut(s) | 259 |
| HpyAV | CCTTC | 2 cut(s) | 119, 711 |
| HpyCH4III | ACNGT | 5 cut(s) | 13, 291, 456, 549, 584 |
| HpyCH4IV | ACGT | 2 cut(s) | 117, 522 |
| HpyCH4V | TGCA | 3 cut(s) | 199, 386, 657 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 200, 266 |
| HpyF3I | CTNAG | 4 cut(s) | 231, 502, 651, 738 |
| HpySE526I | ACGT | 2 cut(s) | 117, 522 |
| Hsp92II | CATG | 2 cut(s) | 386, 761 |
| KspI | CCGCGG | 1 cut(s) | 409 |
| Kzo9I | GATC | 3 cut(s) | 154, 639, 697 |
| LguI | GCTCTTC | 1 cut(s) | 501 |
| LmnI | GCTCC | 2 cut(s) | 344, 377 |
| Lsp1109I | GCAGC | 1 cut(s) | 17 |
| LweI | GCATC | 2 cut(s) | 217, 258 |
| MaeI | CTAG | 3 cut(s) | 21, 617, 778 |
| MaeII | ACGT | 2 cut(s) | 117, 522 |
| MaeIII | GTNAC | 1 cut(s) | 523 |
| MalI | GATC | 3 cut(s) | 156, 641, 699 |
| MboI | GATC | 3 cut(s) | 154, 639, 697 |
| MboII | GAAGA | 3 cut(s) | 116, 164, 488 |
| MflI | RGATCY | 1 cut(s) | 154 |
| MhlI | GDGCHC | 1 cut(s) | 382 |
| MlsI | TGGCCA | 1 cut(s) | 444 |
| MluCI | AATT | 3 cut(s) | 161, 415, 645 |
| MluNI | TGGCCA | 1 cut(s) | 444 |
| MlyI | GAGTC | 3 cut(s) | 242, 320, 755 |
| MnlI | CCTC | 5 cut(s) | 150, 168, 217, 609, 660 |
| Mox20I | TGGCCA | 1 cut(s) | 444 |
| MscI | TGGCCA | 1 cut(s) | 444 |
| MseI | TTAA | 5 cut(s) | 33, 39, 48, 243, 458 |
| Msp20I | TGGCCA | 1 cut(s) | 444 |
| MspA1I | CMGCKG | 1 cut(s) | 408 |
| MspI | CCGG | 2 cut(s) | 528, 724 |
| MspR9I | CCNGG | 2 cut(s) | 190, 271 |
| MvaI | CCWGG | 2 cut(s) | 190, 271 |
| MvnI | CGCG | 1 cut(s) | 408 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 200, 266 |
| NdeII | GATC | 3 cut(s) | 154, 639, 697 |
| NlaIII | CATG | 2 cut(s) | 386, 761 |
| NspI | RCATGY | 1 cut(s) | 386 |
| PciSI | GCTCTTC | 1 cut(s) | 501 |
| PflFI | GACNNNGTC | 1 cut(s) | 119 |
| PinAI | ACCGGT | 1 cut(s) | 527 |
| PkrI | GCNGC | 2 cut(s) | 7, 410 |
| PleI | GAGTC | 3 cut(s) | 241, 320, 755 |
| PpsI | GAGTC | 3 cut(s) | 241, 320, 755 |
| Psp6I | CCWGG | 2 cut(s) | 188, 269 |
| PspGI | CCWGG | 2 cut(s) | 188, 269 |
| PspPI | GGNCC | 2 cut(s) | 192, 403 |
| PsuI | RGATCY | 1 cut(s) | 154 |
| PsyI | GACNNNGTC | 1 cut(s) | 119 |
| RsaI | GTAC | 1 cut(s) | 366 |
| RsaNI | GTAC | 1 cut(s) | 365 |
| Rsr2I | CGGWCCG | 1 cut(s) | 403 |
| RsrII | CGGWCCG | 1 cut(s) | 403 |
| SacII | CCGCGG | 1 cut(s) | 409 |
| SapI | GCTCTTC | 1 cut(s) | 501 |
| SaqAI | TTAA | 5 cut(s) | 33, 39, 48, 243, 458 |
| SatI | GCNGC | 2 cut(s) | 6, 409 |
| Sau3AI | GATC | 3 cut(s) | 154, 639, 697 |
| Sau96I | GGNCC | 2 cut(s) | 192, 403 |
| SchI | GAGTC | 3 cut(s) | 242, 320, 755 |
| ScrFI | CCNGG | 2 cut(s) | 190, 271 |
| SduI | GDGCHC | 1 cut(s) | 382 |
| SetI | ASST | 7 cut(s) | 120, 142, 172, 347, 427, 496, 525 |
| SfaNI | GCATC | 2 cut(s) | 217, 258 |
| Sfr303I | CCGCGG | 1 cut(s) | 409 |
| SgrBI | CCGCGG | 1 cut(s) | 409 |
| SinI | GGWCC | 1 cut(s) | 403 |
| Sse9I | AATT | 3 cut(s) | 161, 415, 645 |
| SsiI | CCGC | 4 cut(s) | 219, 401, 406, 408 |
| SspI | AATATT | 2 cut(s) | 277, 540 |
| SspMI | CTAG | 3 cut(s) | 21, 617, 778 |
| StyD4I | CCNGG | 2 cut(s) | 188, 269 |
| TaaI | ACNGT | 5 cut(s) | 13, 291, 456, 549, 584 |
| TaiI | ACGT | 2 cut(s) | 120, 525 |
| TaqI | TCGA | 4 cut(s) | 123, 329, 642, 696 |
| TasI | AATT | 3 cut(s) | 161, 415, 645 |
| TatI | WGTACW | 1 cut(s) | 364 |
| TauI | GCSGC | 1 cut(s) | 411 |
| Tru1I | TTAA | 5 cut(s) | 33, 39, 48, 243, 458 |
| Tru9I | TTAA | 5 cut(s) | 33, 39, 48, 243, 458 |
| TseI | GCWGC | 1 cut(s) | 5 |
| TspDTI | ATGAA | 2 cut(s) | 375, 677 |
| Tth111I | GACNNNGTC | 1 cut(s) | 119 |
| VpaK11BI | GGWCC | 1 cut(s) | 403 |
| XapI | RAATTY | 1 cut(s) | 161 |
| XceI | RCATGY | 1 cut(s) | 386 |
| XmiI | GTMKAC | 1 cut(s) | 579 |
| XspI | CTAG | 3 cut(s) | 21, 617, 778 |