protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 356 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1171 |
| AccI | GTMKAC | 1 cut(s) | 874 |
| AccII | CGCG | 2 cut(s) | 969, 1036 |
| AciI | CCGC | 4 cut(s) | 219, 419, 446, 803 |
| AclI | AACGTT | 1 cut(s) | 409 |
| AclWI | GGATC | 1 cut(s) | 713 |
| AcsI | RAATTY | 5 cut(s) | 161, 306, 491, 1077, 1313 |
| AcuI | CTGAAG | 1 cut(s) | 123 |
| AfaI | GTAC | 2 cut(s) | 68, 1033 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 438, 439, 538, 1171 |
| AflIII | ACRYGT | 1 cut(s) | 1034 |
| AgeI | ACCGGT | 1 cut(s) | 548 |
| AgsI | TTSAA | 5 cut(s) | 295, 593, 809, 1265, 1464 |
| AhlI | ACTAGT | 1 cut(s) | 994 |
| AjnI | CCWGG | 1 cut(s) | 269 |
| AluBI | AGCT | 7 cut(s) | 44, 203, 515, 700, 814, 838, 1432 |
| AluI | AGCT | 7 cut(s) | 44, 203, 515, 700, 814, 838, 1432 |
| AlwI | GGATC | 1 cut(s) | 713 |
| ApeKI | GCWGC | 3 cut(s) | 5, 1375, 1429 |
| ApoI | RAATTY | 5 cut(s) | 161, 306, 491, 1077, 1313 |
| AseI | ATTAAT | 1 cut(s) | 183 |
| AsiGI | ACCGGT | 1 cut(s) | 548 |
| AspS9I | GGNCC | 2 cut(s) | 826, 1147 |
| AsuHPI | GGTGA | 2 cut(s) | 94, 1004 |
| AsuII | TTCGAA | 1 cut(s) | 496 |
| AvaII | GGWCC | 2 cut(s) | 826, 1147 |
| AxyI | CCTNAGG | 1 cut(s) | 906 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 639, 672 |
| BbsI | GAAGAC | 2 cut(s) | 159, 381 |
| BbvI | GCAGC | 3 cut(s) | 17, 1362, 1441 |
| BccI | CCATC | 5 cut(s) | 91, 119, 602, 742, 1079 |
| BceAI | ACGGC | 1 cut(s) | 341 |
| BciT130I | CCWGG | 1 cut(s) | 271 |
| BciVI | GTATCC | 1 cut(s) | 640 |
| BcuI | ACTAGT | 1 cut(s) | 994 |
| BfaI | CTAG | 6 cut(s) | 21, 189, 599, 638, 995, 1229 |
| BfmI | CTRYAG | 2 cut(s) | 915, 1082 |
| BfuI | GTATCC | 1 cut(s) | 640 |
| BisI | GCNGC | 3 cut(s) | 6, 1376, 1430 |
| BlsI | GCNGC | 3 cut(s) | 7, 1377, 1431 |
| BmcAI | AGTACT | 1 cut(s) | 68 |
| Bme1390I | CCNGG | 1 cut(s) | 271 |
| Bme18I | GGWCC | 2 cut(s) | 826, 1147 |
| BmgT120I | GGNCC | 2 cut(s) | 826, 1147 |
| BmiI | GGNNCC | 2 cut(s) | 355, 1226 |
| BmrFI | CCNGG | 1 cut(s) | 271 |
| BmsI | GCATC | 4 cut(s) | 217, 256, 784, 1288 |
| BpiI | GAAGAC | 2 cut(s) | 159, 381 |
| BpmI | CTGGAG | 2 cut(s) | 303, 1008 |
| Bpu10I | CCTNAGC | 1 cut(s) | 815 |
| Bpu14I | TTCGAA | 1 cut(s) | 496 |
| BsaJI | CCNNGG | 2 cut(s) | 473, 1220 |
| BsaWI | WCCGGW | 1 cut(s) | 548 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 981, 1011 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 438, 439, 538, 1171 |
| Bse118I | RCCGGY | 1 cut(s) | 548 |
| Bse1I | ACTGG | 2 cut(s) | 74, 532 |
| Bse21I | CCTNAGG | 1 cut(s) | 906 |
| BseBI | CCWGG | 1 cut(s) | 271 |
| BseDI | CCNNGG | 2 cut(s) | 473, 1220 |
| BseGI | GGATG | 2 cut(s) | 121, 232 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 438, 439, 538, 1171 |
| BseMII | CTCAG | 3 cut(s) | 222, 746, 897 |
| BseNI | ACTGG | 2 cut(s) | 74, 532 |
| BseRI | GAGGAG | 1 cut(s) | 609 |
| BseXI | GCAGC | 3 cut(s) | 17, 1362, 1441 |
| BsgI | GTGCAG | 1 cut(s) | 1448 |
| Bsh1236I | CGCG | 2 cut(s) | 969, 1036 |
| BshTI | ACCGGT | 1 cut(s) | 548 |
| BsiSI | CCGG | 1 cut(s) | 549 |
| BsiWI | CGTACG | 1 cut(s) | 1031 |
| BslFI | GGGAC | 2 cut(s) | 2, 554 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 438, 439, 538, 1171 |
| BsmFI | GGGAC | 2 cut(s) | 2, 554 |
| Bsp119I | TTCGAA | 1 cut(s) | 496 |
| Bsp143I | GATC | 4 cut(s) | 718, 940, 1117, 1233 |
| Bsp68I | TCGCGA | 1 cut(s) | 969 |
| BspACI | CCGC | 4 cut(s) | 219, 419, 446, 803 |
| BspCNI | CTCAG | 3 cut(s) | 223, 747, 898 |
| BspFNI | CGCG | 2 cut(s) | 969, 1036 |
| BspLI | GGNNCC | 2 cut(s) | 355, 1226 |
| BspPI | GGATC | 1 cut(s) | 713 |
| BspQI | GCTCTTC | 1 cut(s) | 522 |
| BspT104I | TTCGAA | 1 cut(s) | 496 |
| BsrFI | RCCGGY | 1 cut(s) | 548 |
| BsrI | ACTGG | 2 cut(s) | 74, 532 |
| BssAI | RCCGGY | 1 cut(s) | 548 |
| BssECI | CCNNGG | 2 cut(s) | 473, 1220 |
| BssMI | GATC | 4 cut(s) | 718, 940, 1117, 1233 |
| BssNAI | GTATAC | 1 cut(s) | 875 |
| BssT1I | CCWWGG | 1 cut(s) | 1220 |
| Bst1107I | GTATAC | 1 cut(s) | 875 |
| Bst2UI | CCWGG | 1 cut(s) | 271 |
| Bst4CI | ACNGT | 5 cut(s) | 13, 291, 570, 605, 1086 |
| Bst6I | CTCTTC | 3 cut(s) | 522, 927, 1166 |
| BstBI | TTCGAA | 1 cut(s) | 496 |
| BstC8I | GCNNGC | 2 cut(s) | 201, 1091 |
| BstDEI | CTNAG | 5 cut(s) | 231, 672, 755, 815, 906 |
| BstDSI | CCRYGG | 1 cut(s) | 473 |
| BstF5I | GGATG | 2 cut(s) | 121, 232 |
| BstFNI | CGCG | 2 cut(s) | 969, 1036 |
| BstKTI | GATC | 4 cut(s) | 721, 943, 1120, 1236 |
| BstMBI | GATC | 4 cut(s) | 718, 940, 1117, 1233 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 200, 266, 811 |
| BstNI | CCWGG | 1 cut(s) | 271 |
| BstNSI | RCATGY | 4 cut(s) | 1093, 1187, 1375, 1382 |
| BstSCI | CCNGG | 1 cut(s) | 269 |
| BstSFI | CTRYAG | 2 cut(s) | 915, 1082 |
| BstUI | CGCG | 2 cut(s) | 969, 1036 |
| BstV1I | GCAGC | 3 cut(s) | 17, 1362, 1441 |
| BstV2I | GAAGAC | 2 cut(s) | 159, 381 |
| BstZ17I | GTATAC | 1 cut(s) | 875 |
| Bsu36I | CCTNAGG | 1 cut(s) | 906 |
| BsuI | GTATCC | 1 cut(s) | 640 |
| BtgI | CCRYGG | 1 cut(s) | 473 |
| BtgZI | GCGATG | 1 cut(s) | 1265 |
| BtsCI | GGATG | 2 cut(s) | 121, 232 |
| BtsI | GCAGTG | 1 cut(s) | 1176 |
| BtsIMutI | CAGTG | 2 cut(s) | 1091, 1176 |
| BtuMI | TCGCGA | 1 cut(s) | 969 |
| Cac8I | GCNNGC | 2 cut(s) | 201, 1091 |
| Cfr10I | RCCGGY | 1 cut(s) | 548 |
| Cfr13I | GGNCC | 2 cut(s) | 826, 1147 |
| CseI | GACGC | 1 cut(s) | 337 |
| Csp6I | GTAC | 2 cut(s) | 67, 1032 |
| CspAI | ACCGGT | 1 cut(s) | 548 |
| CviQI | GTAC | 2 cut(s) | 67, 1032 |
| DdeI | CTNAG | 5 cut(s) | 231, 672, 755, 815, 906 |
| DpnI | GATC | 4 cut(s) | 720, 942, 1119, 1235 |
| DpnII | GATC | 4 cut(s) | 718, 940, 1117, 1233 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 356 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 356 |
| Eam1104I | CTCTTC | 3 cut(s) | 522, 927, 1166 |
| EarI | CTCTTC | 3 cut(s) | 522, 927, 1166 |
| Eco130I | CCWWGG | 1 cut(s) | 1220 |
| Eco47I | GGWCC | 2 cut(s) | 826, 1147 |
| Eco57I | CTGAAG | 1 cut(s) | 123 |
| Eco81I | CCTNAGG | 1 cut(s) | 906 |
| EcoRI | GAATTC | 1 cut(s) | 161 |
| EcoRII | CCWGG | 1 cut(s) | 269 |
| EcoT14I | CCWWGG | 1 cut(s) | 1220 |
| ErhI | CCWWGG | 1 cut(s) | 1220 |
| FaqI | GGGAC | 2 cut(s) | 2, 554 |
| FauI | CCCGC | 1 cut(s) | 212 |
| FblI | GTMKAC | 1 cut(s) | 874 |
| Fnu4HI | GCNGC | 3 cut(s) | 6, 1376, 1430 |
| FokI | GGATG | 2 cut(s) | 128, 239 |
| Fsp4HI | GCNGC | 3 cut(s) | 6, 1376, 1430 |
| FspBI | CTAG | 6 cut(s) | 21, 189, 599, 638, 995, 1229 |
| GluI | GCNGC | 3 cut(s) | 6, 1376, 1430 |
| GsuI | CTGGAG | 2 cut(s) | 303, 1008 |
| HapII | CCGG | 1 cut(s) | 549 |
| HgaI | GACGC | 1 cut(s) | 337 |
| HincII | GTYRAC | 1 cut(s) | 340 |
| HindII | GTYRAC | 1 cut(s) | 340 |
| HindIII | AAGCTT | 1 cut(s) | 812 |
| HinfI | GANTC | 5 cut(s) | 233, 341, 469, 958, 1023 |
| HpaII | CCGG | 1 cut(s) | 549 |
| HphI | GGTGA | 2 cut(s) | 94, 1004 |
| Hpy166II | GTNNAC | 2 cut(s) | 340, 875 |
| Hpy188I | TCNGA | 2 cut(s) | 756, 954 |
| Hpy188III | TCNNGA | 7 cut(s) | 302, 320, 745, 968, 987, 1020, 1066 |
| Hpy8I | GTNNAC | 2 cut(s) | 340, 875 |
| HpyAV | CCTTC | 6 cut(s) | 98, 383, 716, 732, 1019, 1383 |
| HpyCH4III | ACNGT | 5 cut(s) | 13, 291, 570, 605, 1086 |
| HpyCH4IV | ACGT | 2 cut(s) | 384, 409 |
| HpyCH4V | TGCA | 8 cut(s) | 199, 527, 678, 1089, 1378, 1429, 1437, 1443 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 200, 266, 811 |
| HpyF3I | CTNAG | 5 cut(s) | 231, 672, 755, 815, 906 |
| HpySE526I | ACGT | 2 cut(s) | 384, 409 |
| Kzo9I | GATC | 4 cut(s) | 718, 940, 1117, 1233 |
| LguI | GCTCTTC | 1 cut(s) | 522 |
| LmnI | GCTCC | 3 cut(s) | 353, 1062, 1192 |
| Lsp1109I | GCAGC | 3 cut(s) | 17, 1362, 1441 |
| LweI | GCATC | 4 cut(s) | 217, 256, 784, 1288 |
| MaeI | CTAG | 6 cut(s) | 21, 189, 599, 638, 995, 1229 |
| MaeII | ACGT | 2 cut(s) | 384, 409 |
| MaeIII | GTNAC | 2 cut(s) | 358, 980 |
| MalI | GATC | 4 cut(s) | 720, 942, 1119, 1235 |
| MboI | GATC | 4 cut(s) | 718, 940, 1117, 1233 |
| MboII | GAAGA | 9 cut(s) | 164, 386, 509, 700, 944, 967, 1124, 1153, 1304 |
| MfeI | CAATTG | 1 cut(s) | 363 |
| MluI | ACGCGT | 1 cut(s) | 1034 |
| MlyI | GAGTC | 2 cut(s) | 242, 335 |
| MmeI | TCCRAC | 2 cut(s) | 376, 741 |
| MseI | TTAA | 8 cut(s) | 33, 39, 48, 183, 243, 1103, 1299, 1403 |
| MslI | CAYNNNNRTG | 2 cut(s) | 254, 1424 |
| MspI | CCGG | 1 cut(s) | 549 |
| MspR9I | CCNGG | 1 cut(s) | 271 |
| MunI | CAATTG | 1 cut(s) | 363 |
| MvaI | CCWGG | 1 cut(s) | 271 |
| MvnI | CGCG | 2 cut(s) | 969, 1036 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 200, 266, 811 |
| NdeII | GATC | 4 cut(s) | 718, 940, 1117, 1233 |
| NlaIV | GGNNCC | 2 cut(s) | 355, 1226 |
| NmeAIII | GCCGAG | 1 cut(s) | 859 |
| NmuCI | GTSAC | 1 cut(s) | 358 |
| NruI | TCGCGA | 1 cut(s) | 969 |
| NspI | RCATGY | 4 cut(s) | 1093, 1187, 1375, 1382 |
| NspV | TTCGAA | 1 cut(s) | 496 |
| PaeI | GCATGC | 1 cut(s) | 1093 |
| PciSI | GCTCTTC | 1 cut(s) | 522 |
| PfeI | GAWTC | 3 cut(s) | 469, 958, 1023 |
| Pfl23II | CGTACG | 1 cut(s) | 1031 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1171 |
| PinAI | ACCGGT | 1 cut(s) | 548 |
| PkrI | GCNGC | 3 cut(s) | 7, 1377, 1431 |
| PleI | GAGTC | 2 cut(s) | 241, 335 |
| PpsI | GAGTC | 2 cut(s) | 241, 335 |
| PshBI | ATTAAT | 1 cut(s) | 183 |
| Psp1406I | AACGTT | 1 cut(s) | 409 |
| Psp6I | CCWGG | 1 cut(s) | 269 |
| PspGI | CCWGG | 1 cut(s) | 269 |
| PspLI | CGTACG | 1 cut(s) | 1031 |
| PspN4I | GGNNCC | 2 cut(s) | 355, 1226 |
| PspPI | GGNCC | 2 cut(s) | 826, 1147 |
| RruI | TCGCGA | 1 cut(s) | 969 |
| RsaI | GTAC | 2 cut(s) | 68, 1033 |
| RsaNI | GTAC | 2 cut(s) | 67, 1032 |
| RseI | CAYNNNNRTG | 2 cut(s) | 254, 1424 |
| SapI | GCTCTTC | 1 cut(s) | 522 |
| SaqAI | TTAA | 8 cut(s) | 33, 39, 48, 183, 243, 1103, 1299, 1403 |
| SatI | GCNGC | 3 cut(s) | 6, 1376, 1430 |
| Sau3AI | GATC | 4 cut(s) | 718, 940, 1117, 1233 |
| Sau96I | GGNCC | 2 cut(s) | 826, 1147 |
| ScaI | AGTACT | 1 cut(s) | 68 |
| SchI | GAGTC | 2 cut(s) | 242, 335 |
| ScrFI | CCNGG | 1 cut(s) | 271 |
| SfaNI | GCATC | 4 cut(s) | 217, 256, 784, 1288 |
| SfcI | CTRYAG | 2 cut(s) | 915, 1082 |
| SfuI | TTCGAA | 1 cut(s) | 496 |
| SinI | GGWCC | 2 cut(s) | 826, 1147 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 254, 1424 |
| SpeI | ACTAGT | 1 cut(s) | 994 |
| SphI | GCATGC | 1 cut(s) | 1093 |
| SsiI | CCGC | 4 cut(s) | 219, 419, 446, 803 |
| SspI | AATATT | 3 cut(s) | 37, 277, 1129 |
| SspMI | CTAG | 6 cut(s) | 21, 189, 599, 638, 995, 1229 |
| StyD4I | CCNGG | 1 cut(s) | 269 |
| StyI | CCWWGG | 1 cut(s) | 1220 |
| TaaI | ACNGT | 5 cut(s) | 13, 291, 570, 605, 1086 |
| TaiI | ACGT | 2 cut(s) | 387, 412 |
| TaqI | TCGA | 5 cut(s) | 123, 344, 496, 1074, 1423 |
| TaqII | GACCGA | 2 cut(s) | 677, 843 |
| TatI | WGTACW | 1 cut(s) | 66 |
| TfiI | GAWTC | 3 cut(s) | 469, 958, 1023 |
| Tru1I | TTAA | 8 cut(s) | 33, 39, 48, 183, 243, 1103, 1299, 1403 |
| Tru9I | TTAA | 8 cut(s) | 33, 39, 48, 183, 243, 1103, 1299, 1403 |
| TscAI | CASTG | 2 cut(s) | 1091, 1176 |
| TseFI | GTSAC | 1 cut(s) | 358 |
| TseI | GCWGC | 3 cut(s) | 5, 1375, 1429 |
| Tsp45I | GTSAC | 1 cut(s) | 358 |
| TspGWI | ACGGA | 1 cut(s) | 366 |
| TspRI | CASTG | 2 cut(s) | 1091, 1176 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1171 |
| VpaK11BI | GGWCC | 2 cut(s) | 826, 1147 |
| VspI | ATTAAT | 1 cut(s) | 183 |
| XapI | RAATTY | 5 cut(s) | 161, 306, 491, 1077, 1313 |
| XceI | RCATGY | 4 cut(s) | 1093, 1187, 1375, 1382 |
| XmiI | GTMKAC | 1 cut(s) | 874 |
| XspI | CTAG | 6 cut(s) | 21, 189, 599, 638, 995, 1229 |
| ZrmI | AGTACT | 1 cut(s) | 68 |