protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 220 - 332 | 1.1e-23 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 336 |
| AccBSI | CCGCTC | 1 cut(s) | 106 |
| AciI | CCGC | 4 cut(s) | 106, 203, 309, 509 |
| AclWI | GGATC | 1 cut(s) | 560 |
| AcsI | RAATTY | 3 cut(s) | 179, 395, 867 |
| AcuI | CTGAAG | 1 cut(s) | 909 |
| AfaI | GTAC | 1 cut(s) | 688 |
| AgsI | TTSAA | 6 cut(s) | 184, 503, 517, 544, 581, 667 |
| AjiI | CACGTC | 1 cut(s) | 876 |
| AluBI | AGCT | 1 cut(s) | 272 |
| AluI | AGCT | 1 cut(s) | 272 |
| Alw21I | GWGCWC | 1 cut(s) | 703 |
| Alw26I | GTCTC | 2 cut(s) | 829, 882 |
| AlwI | GGATC | 1 cut(s) | 560 |
| AoxI | GGCC | 2 cut(s) | 286, 931 |
| ApeKI | GCWGC | 2 cut(s) | 725, 728 |
| ApoI | RAATTY | 3 cut(s) | 179, 395, 867 |
| AspS9I | GGNCC | 1 cut(s) | 109 |
| AsuC2I | CCSGG | 1 cut(s) | 744 |
| AsuHPI | GGTGA | 3 cut(s) | 314, 703, 931 |
| AvaII | GGWCC | 1 cut(s) | 109 |
| BaeGI | GKGCMC | 1 cut(s) | 988 |
| BauI | CACGAG | 1 cut(s) | 609 |
| BbsI | GAAGAC | 1 cut(s) | 761 |
| Bbv12I | GWGCWC | 1 cut(s) | 703 |
| BbvI | GCAGC | 2 cut(s) | 712, 740 |
| BclI | TGATCA | 1 cut(s) | 493 |
| BcnI | CCSGG | 1 cut(s) | 744 |
| BcoDI | GTCTC | 2 cut(s) | 829, 882 |
| BfmI | CTRYAG | 1 cut(s) | 726 |
| BisI | GCNGC | 5 cut(s) | 204, 309, 510, 726, 729 |
| BlsI | GCNGC | 5 cut(s) | 205, 310, 511, 727, 730 |
| Bme1390I | CCNGG | 1 cut(s) | 744 |
| Bme18I | GGWCC | 1 cut(s) | 109 |
| BmgBI | CACGTC | 1 cut(s) | 876 |
| BmgT120I | GGNCC | 1 cut(s) | 109 |
| BmiI | GGNNCC | 2 cut(s) | 53, 110 |
| BmrFI | CCNGG | 1 cut(s) | 744 |
| BmsI | GCATC | 3 cut(s) | 87, 808, 1062 |
| BpiI | GAAGAC | 1 cut(s) | 761 |
| BpmI | CTGGAG | 1 cut(s) | 450 |
| BpuMI | CCSGG | 1 cut(s) | 744 |
| BsaJI | CCNNGG | 1 cut(s) | 743 |
| Bse1I | ACTGG | 2 cut(s) | 1044, 1052 |
| BseDI | CCNNGG | 1 cut(s) | 743 |
| BseGI | GGATG | 2 cut(s) | 351, 1077 |
| BseNI | ACTGG | 2 cut(s) | 1044, 1052 |
| BseSI | GKGCMC | 1 cut(s) | 988 |
| BseXI | GCAGC | 2 cut(s) | 712, 740 |
| BshFI | GGCC | 2 cut(s) | 288, 933 |
| BsiHKAI | GWGCWC | 1 cut(s) | 703 |
| BsiSI | CCGG | 1 cut(s) | 743 |
| BsmAI | GTCTC | 2 cut(s) | 829, 882 |
| BsmBI | CGTCTC | 1 cut(s) | 882 |
| BsmI | GAATGC | 1 cut(s) | 731 |
| BsnI | GGCC | 2 cut(s) | 288, 933 |
| Bsp1286I | GDGCHC | 2 cut(s) | 703, 988 |
| Bsp1407I | TGTACA | 1 cut(s) | 686 |
| Bsp143I | GATC | 2 cut(s) | 493, 565 |
| BspACI | CCGC | 4 cut(s) | 106, 203, 309, 509 |
| BspANI | GGCC | 2 cut(s) | 288, 933 |
| BspLI | GGNNCC | 2 cut(s) | 53, 110 |
| BspMAI | CTGCAG | 1 cut(s) | 730 |
| BspPI | GGATC | 1 cut(s) | 560 |
| BsrBI | CCGCTC | 1 cut(s) | 106 |
| BsrGI | TGTACA | 1 cut(s) | 686 |
| BsrI | ACTGG | 2 cut(s) | 1044, 1052 |
| BssECI | CCNNGG | 1 cut(s) | 743 |
| BssMI | GATC | 2 cut(s) | 493, 565 |
| BssSI | CACGAG | 1 cut(s) | 609 |
| Bst2BI | CACGAG | 1 cut(s) | 609 |
| Bst4CI | ACNGT | 4 cut(s) | 195, 463, 691, 739 |
| Bst6I | CTCTTC | 1 cut(s) | 651 |
| BstAUI | TGTACA | 1 cut(s) | 686 |
| BstC8I | GCNNGC | 1 cut(s) | 1041 |
| BstF5I | GGATG | 2 cut(s) | 351, 1077 |
| BstKTI | GATC | 2 cut(s) | 496, 568 |
| BstMAI | GTCTC | 2 cut(s) | 829, 882 |
| BstMBI | GATC | 2 cut(s) | 493, 565 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 112, 650 |
| BstNSI | RCATGY | 1 cut(s) | 221 |
| BstSCI | CCNGG | 1 cut(s) | 742 |
| BstSFI | CTRYAG | 1 cut(s) | 726 |
| BstSLI | GKGCMC | 1 cut(s) | 988 |
| BstV1I | GCAGC | 2 cut(s) | 712, 740 |
| BstV2I | GAAGAC | 1 cut(s) | 761 |
| BstX2I | RGATCY | 1 cut(s) | 565 |
| BstYI | RGATCY | 1 cut(s) | 565 |
| BsuRI | GGCC | 2 cut(s) | 288, 933 |
| BtrI | CACGTC | 1 cut(s) | 876 |
| BtsCI | GGATG | 2 cut(s) | 351, 1077 |
| BtsIMutI | CAGTG | 2 cut(s) | 191, 1051 |
| Cac8I | GCNNGC | 1 cut(s) | 1041 |
| Cfr13I | GGNCC | 1 cut(s) | 109 |
| Csp6I | GTAC | 1 cut(s) | 687 |
| CviAII | CATG | 6 cut(s) | 101, 130, 218, 715, 856, 964 |
| CviJI | RGCY | 5 cut(s) | 52, 272, 288, 512, 933 |
| CviKI_1 | RGCY | 5 cut(s) | 52, 272, 288, 512, 933 |
| CviQI | GTAC | 1 cut(s) | 687 |
| DpnI | GATC | 2 cut(s) | 495, 567 |
| DpnII | GATC | 2 cut(s) | 493, 565 |
| DraI | TTTAAA | 1 cut(s) | 268 |
| Eam1104I | CTCTTC | 1 cut(s) | 651 |
| EarI | CTCTTC | 1 cut(s) | 651 |
| Eco147I | AGGCCT | 1 cut(s) | 933 |
| Eco47I | GGWCC | 1 cut(s) | 109 |
| Eco57I | CTGAAG | 1 cut(s) | 909 |
| EcoRI | GAATTC | 2 cut(s) | 395, 867 |
| EcoT22I | ATGCAT | 1 cut(s) | 102 |
| Esp3I | CGTCTC | 1 cut(s) | 882 |
| FaeI | CATG | 6 cut(s) | 104, 133, 221, 718, 859, 967 |
| FatI | CATG | 6 cut(s) | 100, 129, 217, 714, 855, 963 |
| FauI | CCCGC | 1 cut(s) | 99 |
| FauNDI | CATATG | 1 cut(s) | 1067 |
| FbaI | TGATCA | 1 cut(s) | 493 |
| Fnu4HI | GCNGC | 5 cut(s) | 204, 309, 510, 726, 729 |
| FokI | GGATG | 2 cut(s) | 338, 1084 |
| Fsp4HI | GCNGC | 5 cut(s) | 204, 309, 510, 726, 729 |
| GluI | GCNGC | 5 cut(s) | 204, 309, 510, 726, 729 |
| GsuI | CTGGAG | 1 cut(s) | 450 |
| HaeIII | GGCC | 2 cut(s) | 288, 933 |
| HapII | CCGG | 1 cut(s) | 743 |
| Hin1II | CATG | 6 cut(s) | 104, 133, 221, 718, 859, 967 |
| HinfI | GANTC | 3 cut(s) | 28, 69, 659 |
| HpaII | CCGG | 1 cut(s) | 743 |
| HphI | GGTGA | 3 cut(s) | 314, 703, 931 |
| Hpy166II | GTNNAC | 1 cut(s) | 589 |
| Hpy188I | TCNGA | 6 cut(s) | 14, 87, 565, 817, 889, 1115 |
| Hpy188III | TCNNGA | 1 cut(s) | 429 |
| Hpy8I | GTNNAC | 1 cut(s) | 589 |
| HpyAV | CCTTC | 2 cut(s) | 278, 661 |
| HpyCH4III | ACNGT | 4 cut(s) | 195, 463, 691, 739 |
| HpyCH4IV | ACGT | 2 cut(s) | 251, 875 |
| HpyCH4V | TGCA | 6 cut(s) | 100, 523, 574, 728, 821, 1075 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 112, 650 |
| HpySE526I | ACGT | 2 cut(s) | 251, 875 |
| Hsp92II | CATG | 6 cut(s) | 104, 133, 221, 718, 859, 967 |
| Ksp22I | TGATCA | 1 cut(s) | 493 |
| Kzo9I | GATC | 2 cut(s) | 493, 565 |
| LmnI | GCTCC | 1 cut(s) | 57 |
| LpnPI | CCDG | 6 cut(s) | 125, 414, 750, 756, 1057, 1065 |
| Lsp1109I | GCAGC | 2 cut(s) | 712, 740 |
| LweI | GCATC | 3 cut(s) | 87, 808, 1062 |
| MaeII | ACGT | 2 cut(s) | 251, 875 |
| MaeIII | GTNAC | 3 cut(s) | 320, 709, 796 |
| MalI | GATC | 2 cut(s) | 495, 567 |
| MbiI | CCGCTC | 1 cut(s) | 106 |
| MboI | GATC | 2 cut(s) | 493, 565 |
| MboII | GAAGA | 5 cut(s) | 293, 668, 761, 828, 902 |
| MfeI | CAATTG | 1 cut(s) | 1017 |
| MflI | RGATCY | 1 cut(s) | 565 |
| MhlI | GDGCHC | 2 cut(s) | 703, 988 |
| MlyI | GAGTC | 1 cut(s) | 668 |
| MnlI | CCTC | 7 cut(s) | 8, 135, 398, 541, 643, 953, 1069 |
| Mph1103I | ATGCAT | 1 cut(s) | 102 |
| MseI | TTAA | 3 cut(s) | 243, 267, 782 |
| MslI | CAYNNNNRTG | 4 cut(s) | 716, 920, 965, 1070 |
| MspA1I | CMGCKG | 1 cut(s) | 311 |
| MspI | CCGG | 1 cut(s) | 743 |
| MspR9I | CCNGG | 1 cut(s) | 744 |
| MunI | CAATTG | 1 cut(s) | 1017 |
| Mva1269I | GAATGC | 1 cut(s) | 731 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 112, 650 |
| NciI | CCSGG | 1 cut(s) | 744 |
| NdeI | CATATG | 1 cut(s) | 1067 |
| NdeII | GATC | 2 cut(s) | 493, 565 |
| NlaIII | CATG | 6 cut(s) | 104, 133, 221, 718, 859, 967 |
| NlaIV | GGNNCC | 2 cut(s) | 53, 110 |
| NmuCI | GTSAC | 3 cut(s) | 320, 709, 796 |
| NsiI | ATGCAT | 1 cut(s) | 102 |
| NspI | RCATGY | 1 cut(s) | 221 |
| PceI | AGGCCT | 1 cut(s) | 933 |
| PctI | GAATGC | 1 cut(s) | 731 |
| PfeI | GAWTC | 2 cut(s) | 28, 69 |
| PkrI | GCNGC | 5 cut(s) | 205, 310, 511, 727, 730 |
| PleI | GAGTC | 1 cut(s) | 667 |
| PpsI | GAGTC | 1 cut(s) | 667 |
| PsiI | TTATAA | 1 cut(s) | 336 |
| PspN4I | GGNNCC | 2 cut(s) | 53, 110 |
| PspPI | GGNCC | 1 cut(s) | 109 |
| PstI | CTGCAG | 1 cut(s) | 730 |
| PsuI | RGATCY | 1 cut(s) | 565 |
| RsaI | GTAC | 1 cut(s) | 688 |
| RsaNI | GTAC | 1 cut(s) | 687 |
| RseI | CAYNNNNRTG | 4 cut(s) | 716, 920, 965, 1070 |
| SaqAI | TTAA | 3 cut(s) | 243, 267, 782 |
| SatI | GCNGC | 5 cut(s) | 204, 309, 510, 726, 729 |
| Sau3AI | GATC | 2 cut(s) | 493, 565 |
| Sau96I | GGNCC | 1 cut(s) | 109 |
| SchI | GAGTC | 1 cut(s) | 668 |
| ScrFI | CCNGG | 1 cut(s) | 744 |
| SduI | GDGCHC | 2 cut(s) | 703, 988 |
| SfaNI | GCATC | 3 cut(s) | 87, 808, 1062 |
| SfcI | CTRYAG | 1 cut(s) | 726 |
| SinI | GGWCC | 1 cut(s) | 109 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 716, 920, 965, 1070 |
| SseBI | AGGCCT | 1 cut(s) | 933 |
| SsiI | CCGC | 4 cut(s) | 106, 203, 309, 509 |
| SspI | AATATT | 2 cut(s) | 618, 1125 |
| StuI | AGGCCT | 1 cut(s) | 933 |
| StyD4I | CCNGG | 1 cut(s) | 742 |
| TaaI | ACNGT | 4 cut(s) | 195, 463, 691, 739 |
| TaiI | ACGT | 2 cut(s) | 254, 878 |
| TaqI | TCGA | 1 cut(s) | 399 |
| TatI | WGTACW | 1 cut(s) | 686 |
| TauI | GCSGC | 3 cut(s) | 206, 311, 512 |
| TfiI | GAWTC | 2 cut(s) | 28, 69 |
| Tru1I | TTAA | 3 cut(s) | 243, 267, 782 |
| Tru9I | TTAA | 3 cut(s) | 243, 267, 782 |
| TscAI | CASTG | 2 cut(s) | 198, 1051 |
| TseFI | GTSAC | 3 cut(s) | 320, 709, 796 |
| TseI | GCWGC | 2 cut(s) | 725, 728 |
| Tsp45I | GTSAC | 3 cut(s) | 320, 709, 796 |
| TspDTI | ATGAA | 7 cut(s) | 104, 224, 408, 417, 771, 1054, 1090 |
| TspGWI | ACGGA | 2 cut(s) | 638, 1071 |
| TspRI | CASTG | 2 cut(s) | 198, 1051 |
| VpaK11BI | GGWCC | 1 cut(s) | 109 |
| XapI | RAATTY | 3 cut(s) | 179, 395, 867 |
| XceI | RCATGY | 1 cut(s) | 221 |
| Zsp2I | ATGCAT | 1 cut(s) | 102 |