protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 256 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 942 |
| AciI | CCGC | 1 cut(s) | 335 |
| AcsI | RAATTY | 2 cut(s) | 382, 700 |
| AcuI | CTGAAG | 1 cut(s) | 624 |
| AfaI | GTAC | 1 cut(s) | 481 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 942 |
| AgsI | TTSAA | 1 cut(s) | 229 |
| AjnI | CCWGG | 2 cut(s) | 535, 913 |
| AluBI | AGCT | 2 cut(s) | 25, 578 |
| AluI | AGCT | 2 cut(s) | 25, 578 |
| Alw21I | GWGCWC | 2 cut(s) | 310, 496 |
| Alw26I | GTCTC | 3 cut(s) | 148, 171, 457 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 536 |
| AoxI | GGCC | 3 cut(s) | 114, 724, 813 |
| ApeKI | GCWGC | 2 cut(s) | 518, 521 |
| ApoI | RAATTY | 2 cut(s) | 382, 700 |
| AspS9I | GGNCC | 3 cut(s) | 115, 813, 911 |
| AsuII | TTCGAA | 1 cut(s) | 37 |
| AvaII | GGWCC | 1 cut(s) | 911 |
| AxyI | CCTNAGG | 1 cut(s) | 360 |
| BanI | GGYRCC | 1 cut(s) | 256 |
| BauI | CACGAG | 1 cut(s) | 425 |
| Bbv12I | GWGCWC | 2 cut(s) | 310, 496 |
| BbvCI | CCTCAGC | 1 cut(s) | 99 |
| BbvI | GCAGC | 2 cut(s) | 505, 533 |
| BccI | CCATC | 2 cut(s) | 280, 383 |
| BciT130I | CCWGG | 2 cut(s) | 537, 915 |
| BcoDI | GTCTC | 3 cut(s) | 148, 171, 457 |
| BfaI | CTAG | 2 cut(s) | 575, 840 |
| BfmI | CTRYAG | 1 cut(s) | 519 |
| BglII | AGATCT | 1 cut(s) | 222 |
| BisI | GCNGC | 2 cut(s) | 519, 522 |
| BlsI | GCNGC | 2 cut(s) | 520, 523 |
| Bme1390I | CCNGG | 2 cut(s) | 537, 915 |
| Bme18I | GGWCC | 1 cut(s) | 911 |
| BmgT120I | GGNCC | 3 cut(s) | 115, 813, 911 |
| BmiI | GGNNCC | 2 cut(s) | 117, 258 |
| BmrFI | CCNGG | 2 cut(s) | 537, 915 |
| BmsI | GCATC | 4 cut(s) | 118, 140, 184, 357 |
| BoxI | GACNNNNGTC | 1 cut(s) | 279 |
| Bpu10I | CCTNAGC | 1 cut(s) | 99 |
| Bpu14I | TTCGAA | 1 cut(s) | 37 |
| BpuEI | CTTGAG | 2 cut(s) | 248, 680 |
| BsaI | GGTCTC | 1 cut(s) | 148 |
| BsaJI | CCNNGG | 3 cut(s) | 61, 269, 941 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 942 |
| Bse1I | ACTGG | 1 cut(s) | 848 |
| Bse21I | CCTNAGG | 1 cut(s) | 360 |
| Bse3DI | GCAATG | 1 cut(s) | 330 |
| BseBI | CCWGG | 2 cut(s) | 537, 915 |
| BseDI | CCNNGG | 3 cut(s) | 61, 269, 941 |
| BseGI | GGATG | 1 cut(s) | 199 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 942 |
| BseMI | GCAATG | 1 cut(s) | 330 |
| BseMII | CTCAG | 2 cut(s) | 90, 351 |
| BseNI | ACTGG | 1 cut(s) | 848 |
| BseRI | GAGGAG | 2 cut(s) | 377, 455 |
| BseXI | GCAGC | 2 cut(s) | 505, 533 |
| BshFI | GGCC | 3 cut(s) | 116, 726, 815 |
| BshNI | GGYRCC | 1 cut(s) | 256 |
| BsiHKAI | GWGCWC | 2 cut(s) | 310, 496 |
| BslFI | GGGAC | 2 cut(s) | 287, 478 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 942 |
| BsmAI | GTCTC | 3 cut(s) | 148, 171, 457 |
| BsmBI | CGTCTC | 1 cut(s) | 171 |
| BsmFI | GGGAC | 2 cut(s) | 287, 478 |
| BsnI | GGCC | 3 cut(s) | 116, 726, 815 |
| Bso31I | GGTCTC | 1 cut(s) | 148 |
| Bsp119I | TTCGAA | 1 cut(s) | 37 |
| Bsp1286I | GDGCHC | 2 cut(s) | 310, 496 |
| Bsp1407I | TGTACA | 1 cut(s) | 479 |
| Bsp143I | GATC | 3 cut(s) | 70, 87, 222 |
| Bsp19I | CCATGG | 2 cut(s) | 61, 941 |
| BspACI | CCGC | 1 cut(s) | 335 |
| BspANI | GGCC | 3 cut(s) | 116, 726, 815 |
| BspCNI | CTCAG | 2 cut(s) | 91, 352 |
| BspLI | GGNNCC | 2 cut(s) | 117, 258 |
| BspMAI | CTGCAG | 1 cut(s) | 523 |
| BspQI | GCTCTTC | 1 cut(s) | 153 |
| BspT104I | TTCGAA | 1 cut(s) | 37 |
| BspT107I | GGYRCC | 1 cut(s) | 256 |
| BspTNI | GGTCTC | 1 cut(s) | 148 |
| BsrDI | GCAATG | 1 cut(s) | 330 |
| BsrGI | TGTACA | 1 cut(s) | 479 |
| BsrI | ACTGG | 1 cut(s) | 848 |
| BssECI | CCNNGG | 3 cut(s) | 61, 269, 941 |
| BssMI | GATC | 3 cut(s) | 70, 87, 222 |
| BssSI | CACGAG | 1 cut(s) | 425 |
| BssT1I | CCWWGG | 3 cut(s) | 61, 269, 941 |
| Bst2BI | CACGAG | 1 cut(s) | 425 |
| Bst2UI | CCWGG | 2 cut(s) | 537, 915 |
| Bst4CI | ACNGT | 3 cut(s) | 18, 484, 532 |
| Bst6I | CTCTTC | 1 cut(s) | 153 |
| BstAUI | TGTACA | 1 cut(s) | 479 |
| BstBI | TTCGAA | 1 cut(s) | 37 |
| BstC8I | GCNNGC | 1 cut(s) | 23 |
| BstDEI | CTNAG | 5 cut(s) | 91, 99, 360, 417, 579 |
| BstDSI | CCRYGG | 2 cut(s) | 61, 941 |
| BstF5I | GGATG | 1 cut(s) | 199 |
| BstKTI | GATC | 3 cut(s) | 73, 90, 225 |
| BstMAI | GTCTC | 3 cut(s) | 148, 171, 457 |
| BstMBI | GATC | 3 cut(s) | 70, 87, 222 |
| BstNI | CCWGG | 2 cut(s) | 537, 915 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 279 |
| BstSCI | CCNGG | 2 cut(s) | 535, 913 |
| BstSFI | CTRYAG | 1 cut(s) | 519 |
| BstV1I | GCAGC | 2 cut(s) | 505, 533 |
| BstX2I | RGATCY | 1 cut(s) | 222 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 337 |
| BstYI | RGATCY | 1 cut(s) | 222 |
| Bsu36I | CCTNAGG | 1 cut(s) | 360 |
| BsuRI | GGCC | 3 cut(s) | 116, 726, 815 |
| BtgI | CCRYGG | 2 cut(s) | 61, 941 |
| BtsCI | GGATG | 1 cut(s) | 199 |
| Cac8I | GCNNGC | 1 cut(s) | 23 |
| CaiI | CAGNNNCTG | 1 cut(s) | 536 |
| Cfr13I | GGNCC | 3 cut(s) | 115, 813, 911 |
| Csp6I | GTAC | 1 cut(s) | 480 |
| CviAII | CATG | 9 cut(s) | 62, 74, 139, 326, 371, 404, 757, 810, 942 |
| CviJI | RGCY | 7 cut(s) | 25, 116, 163, 268, 578, 726, 815 |
| CviKI_1 | RGCY | 7 cut(s) | 25, 116, 163, 268, 578, 726, 815 |
| CviQI | GTAC | 1 cut(s) | 480 |
| DdeI | CTNAG | 5 cut(s) | 91, 99, 360, 417, 579 |
| DpnI | GATC | 3 cut(s) | 72, 89, 224 |
| DpnII | GATC | 3 cut(s) | 70, 87, 222 |
| Eam1104I | CTCTTC | 1 cut(s) | 153 |
| EarI | CTCTTC | 1 cut(s) | 153 |
| Eco130I | CCWWGG | 3 cut(s) | 61, 269, 941 |
| Eco147I | AGGCCT | 1 cut(s) | 726 |
| Eco31I | GGTCTC | 1 cut(s) | 148 |
| Eco47I | GGWCC | 1 cut(s) | 911 |
| Eco57I | CTGAAG | 1 cut(s) | 624 |
| Eco81I | CCTNAGG | 1 cut(s) | 360 |
| EcoRII | CCWGG | 2 cut(s) | 535, 913 |
| EcoT14I | CCWWGG | 3 cut(s) | 61, 269, 941 |
| EcoT22I | ATGCAT | 2 cut(s) | 133, 372 |
| ErhI | CCWWGG | 3 cut(s) | 61, 269, 941 |
| Esp3I | CGTCTC | 1 cut(s) | 171 |
| FaeI | CATG | 9 cut(s) | 65, 77, 142, 329, 374, 407, 760, 813, 945 |
| FaqI | GGGAC | 2 cut(s) | 287, 478 |
| FatI | CATG | 9 cut(s) | 61, 73, 138, 325, 370, 403, 756, 809, 941 |
| Fnu4HI | GCNGC | 2 cut(s) | 519, 522 |
| FokI | GGATG | 1 cut(s) | 206 |
| Fsp4HI | GCNGC | 2 cut(s) | 519, 522 |
| FspBI | CTAG | 2 cut(s) | 575, 840 |
| GluI | GCNGC | 2 cut(s) | 519, 522 |
| HaeIII | GGCC | 3 cut(s) | 116, 726, 815 |
| Hin1II | CATG | 9 cut(s) | 65, 77, 142, 329, 374, 407, 760, 813, 945 |
| HincII | GTYRAC | 1 cut(s) | 903 |
| HindII | GTYRAC | 1 cut(s) | 903 |
| HinfI | GANTC | 4 cut(s) | 216, 275, 421, 660 |
| Hpy166II | GTNNAC | 1 cut(s) | 903 |
| Hpy188I | TCNGA | 6 cut(s) | 170, 285, 297, 388, 610, 956 |
| Hpy188III | TCNNGA | 5 cut(s) | 213, 220, 425, 565, 697 |
| Hpy8I | GTNNAC | 1 cut(s) | 903 |
| HpyCH4III | ACNGT | 3 cut(s) | 18, 484, 532 |
| HpyCH4IV | ACGT | 1 cut(s) | 673 |
| HpyCH4V | TGCA | 8 cut(s) | 21, 131, 319, 370, 521, 680, 828, 871 |
| HpyF3I | CTNAG | 5 cut(s) | 91, 99, 360, 417, 579 |
| HpySE526I | ACGT | 1 cut(s) | 673 |
| Hsp92II | CATG | 9 cut(s) | 65, 77, 142, 329, 374, 407, 760, 813, 945 |
| Kzo9I | GATC | 3 cut(s) | 70, 87, 222 |
| LguI | GCTCTTC | 1 cut(s) | 153 |
| LmnI | GCTCC | 2 cut(s) | 202, 313 |
| Lsp1109I | GCAGC | 2 cut(s) | 505, 533 |
| LweI | GCATC | 4 cut(s) | 118, 140, 184, 357 |
| MaeI | CTAG | 2 cut(s) | 575, 840 |
| MaeII | ACGT | 1 cut(s) | 673 |
| MaeIII | GTNAC | 1 cut(s) | 502 |
| MalI | GATC | 3 cut(s) | 72, 89, 224 |
| MboI | GATC | 3 cut(s) | 70, 87, 222 |
| MboII | GAAGA | 7 cut(s) | 48, 80, 170, 217, 621, 765, 812 |
| MflI | RGATCY | 1 cut(s) | 222 |
| MhlI | GDGCHC | 2 cut(s) | 310, 496 |
| MluCI | AATT | 5 cut(s) | 301, 382, 603, 700, 872 |
| MlyI | GAGTC | 1 cut(s) | 269 |
| Mph1103I | ATGCAT | 2 cut(s) | 133, 372 |
| MseI | TTAA | 2 cut(s) | 795, 948 |
| MslI | CAYNNNNRTG | 5 cut(s) | 324, 335, 758, 788, 862 |
| MspR9I | CCNGG | 2 cut(s) | 537, 915 |
| MvaI | CCWGG | 2 cut(s) | 537, 915 |
| NcoI | CCATGG | 2 cut(s) | 61, 941 |
| NdeII | GATC | 3 cut(s) | 70, 87, 222 |
| NlaIII | CATG | 9 cut(s) | 65, 77, 142, 329, 374, 407, 760, 813, 945 |
| NlaIV | GGNNCC | 2 cut(s) | 117, 258 |
| NsiI | ATGCAT | 2 cut(s) | 133, 372 |
| NspV | TTCGAA | 1 cut(s) | 37 |
| PceI | AGGCCT | 1 cut(s) | 726 |
| PciSI | GCTCTTC | 1 cut(s) | 153 |
| PfeI | GAWTC | 3 cut(s) | 216, 421, 660 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 942 |
| PkrI | GCNGC | 2 cut(s) | 520, 523 |
| PleI | GAGTC | 1 cut(s) | 269 |
| PpsI | GAGTC | 1 cut(s) | 269 |
| PshAI | GACNNNNGTC | 1 cut(s) | 279 |
| Psp6I | CCWGG | 2 cut(s) | 535, 913 |
| PspGI | CCWGG | 2 cut(s) | 535, 913 |
| PspN4I | GGNNCC | 2 cut(s) | 117, 258 |
| PspPI | GGNCC | 3 cut(s) | 115, 813, 911 |
| PstI | CTGCAG | 1 cut(s) | 523 |
| PstNI | CAGNNNCTG | 1 cut(s) | 536 |
| PsuI | RGATCY | 1 cut(s) | 222 |
| RsaI | GTAC | 1 cut(s) | 481 |
| RsaNI | GTAC | 1 cut(s) | 480 |
| RseI | CAYNNNNRTG | 5 cut(s) | 324, 335, 758, 788, 862 |
| SapI | GCTCTTC | 1 cut(s) | 153 |
| SaqAI | TTAA | 2 cut(s) | 795, 948 |
| SatI | GCNGC | 2 cut(s) | 519, 522 |
| Sau3AI | GATC | 3 cut(s) | 70, 87, 222 |
| Sau96I | GGNCC | 3 cut(s) | 115, 813, 911 |
| SchI | GAGTC | 1 cut(s) | 269 |
| ScrFI | CCNGG | 2 cut(s) | 537, 915 |
| SduI | GDGCHC | 2 cut(s) | 310, 496 |
| SfaNI | GCATC | 4 cut(s) | 118, 140, 184, 357 |
| SfcI | CTRYAG | 1 cut(s) | 519 |
| SfuI | TTCGAA | 1 cut(s) | 37 |
| SinI | GGWCC | 1 cut(s) | 911 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 324, 335, 758, 788, 862 |
| SmlI | CTYRAG | 2 cut(s) | 263, 695 |
| SmoI | CTYRAG | 2 cut(s) | 263, 695 |
| Sse9I | AATT | 5 cut(s) | 301, 382, 603, 700, 872 |
| SseBI | AGGCCT | 1 cut(s) | 726 |
| SsiI | CCGC | 1 cut(s) | 335 |
| SspI | AATATT | 1 cut(s) | 921 |
| SspMI | CTAG | 2 cut(s) | 575, 840 |
| StuI | AGGCCT | 1 cut(s) | 726 |
| StyD4I | CCNGG | 2 cut(s) | 535, 913 |
| StyI | CCWWGG | 3 cut(s) | 61, 269, 941 |
| TaaI | ACNGT | 3 cut(s) | 18, 484, 532 |
| TaiI | ACGT | 1 cut(s) | 676 |
| TaqI | TCGA | 2 cut(s) | 37, 242 |
| TasI | AATT | 5 cut(s) | 301, 382, 603, 700, 872 |
| TatI | WGTACW | 1 cut(s) | 479 |
| TfiI | GAWTC | 3 cut(s) | 216, 421, 660 |
| Tru1I | TTAA | 2 cut(s) | 795, 948 |
| Tru9I | TTAA | 2 cut(s) | 795, 948 |
| TseI | GCWGC | 2 cut(s) | 518, 521 |
| TspDTI | ATGAA | 5 cut(s) | 65, 387, 420, 473, 589 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 942 |
| VpaK11BI | GGWCC | 1 cut(s) | 911 |
| XapI | RAATTY | 2 cut(s) | 382, 700 |
| XspI | CTAG | 2 cut(s) | 575, 840 |
| Zsp2I | ATGCAT | 2 cut(s) | 133, 372 |