protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1008 |
| AccI | GTMKAC | 3 cut(s) | 591, 1015, 1117 |
| AccII | CGCG | 2 cut(s) | 1110, 1212 |
| AciI | CCGC | 3 cut(s) | 219, 413, 418 |
| AclWI | GGATC | 2 cut(s) | 149, 704 |
| AcuI | CTGAAG | 2 cut(s) | 123, 339 |
| AfaI | GTAC | 3 cut(s) | 952, 1023, 1125 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 430, 529 |
| AflII | CTTAAG | 1 cut(s) | 806 |
| AflIII | ACRYGT | 4 cut(s) | 1018, 1037, 1120, 1139 |
| AgeI | ACCGGT | 1 cut(s) | 539 |
| AgsI | TTSAA | 3 cut(s) | 331, 529, 800 |
| AjnI | CCWGG | 2 cut(s) | 188, 269 |
| AleI | CACNNNNGTG | 1 cut(s) | 921 |
| AluBI | AGCT | 9 cut(s) | 170, 343, 437, 506, 805, 824, 829, 956, 982 |
| AluI | AGCT | 9 cut(s) | 170, 343, 437, 506, 805, 824, 829, 956, 982 |
| Alw21I | GWGCWC | 2 cut(s) | 369, 394 |
| Alw26I | GTCTC | 1 cut(s) | 1159 |
| AlwI | GGATC | 2 cut(s) | 149, 704 |
| AoxI | GGCC | 1 cut(s) | 192 |
| ApeKI | GCWGC | 2 cut(s) | 5, 420 |
| AsiGI | ACCGGT | 1 cut(s) | 539 |
| AspS9I | GGNCC | 3 cut(s) | 192, 415, 817 |
| AsuHPI | GGTGA | 3 cut(s) | 371, 935, 1247 |
| AsuNHI | GCTAGC | 1 cut(s) | 974 |
| AvaII | GGWCC | 2 cut(s) | 415, 817 |
| AxyI | CCTNAGG | 2 cut(s) | 1047, 1149 |
| BbsI | GAAGAC | 1 cut(s) | 315 |
| Bbv12I | GWGCWC | 2 cut(s) | 369, 394 |
| BbvI | GCAGC | 2 cut(s) | 17, 407 |
| BccI | CCATC | 3 cut(s) | 350, 733, 1106 |
| BceAI | ACGGC | 1 cut(s) | 273 |
| BciT130I | CCWGG | 2 cut(s) | 190, 271 |
| BciVI | GTATCC | 3 cut(s) | 631, 1052, 1154 |
| BcoDI | GTCTC | 1 cut(s) | 1159 |
| BfaI | CTAG | 4 cut(s) | 21, 557, 629, 975 |
| BfrI | CTTAAG | 1 cut(s) | 806 |
| BfuI | GTATCC | 3 cut(s) | 631, 1052, 1154 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 200 |
| BisI | GCNGC | 2 cut(s) | 6, 421 |
| BlpI | GCTNAGC | 1 cut(s) | 825 |
| BlsI | GCNGC | 2 cut(s) | 7, 422 |
| Bme1390I | CCNGG | 2 cut(s) | 190, 271 |
| Bme18I | GGWCC | 2 cut(s) | 415, 817 |
| BmgT120I | GGNCC | 3 cut(s) | 192, 415, 817 |
| BmiI | GGNNCC | 1 cut(s) | 818 |
| BmrFI | CCNGG | 2 cut(s) | 190, 271 |
| BmsI | GCATC | 2 cut(s) | 31, 217 |
| BmtI | GCTAGC | 1 cut(s) | 978 |
| BpiI | GAAGAC | 1 cut(s) | 315 |
| BpmI | CTGGAG | 2 cut(s) | 365, 408 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 825 |
| BpuEI | CTTGAG | 1 cut(s) | 894 |
| BsaAI | YACGTR | 4 cut(s) | 1021, 1040, 1123, 1142 |
| BsaI | GGTCTC | 1 cut(s) | 1159 |
| BsaJI | CCNNGG | 1 cut(s) | 189 |
| BsaWI | WCCGGW | 1 cut(s) | 539 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1224, 1254 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 430, 529 |
| Bse118I | RCCGGY | 1 cut(s) | 539 |
| Bse1I | ACTGG | 2 cut(s) | 74, 523 |
| Bse21I | CCTNAGG | 2 cut(s) | 1047, 1149 |
| BseBI | CCWGG | 2 cut(s) | 190, 271 |
| BseDI | CCNNGG | 1 cut(s) | 189 |
| BseGI | GGATG | 3 cut(s) | 232, 1066, 1168 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 430, 529 |
| BseMII | CTCAG | 6 cut(s) | 222, 654, 737, 816, 1038, 1140 |
| BseNI | ACTGG | 2 cut(s) | 74, 523 |
| BseRI | GAGGAG | 3 cut(s) | 600, 1088, 1190 |
| BseXI | GCAGC | 2 cut(s) | 17, 407 |
| Bsh1236I | CGCG | 2 cut(s) | 1110, 1212 |
| BshFI | GGCC | 1 cut(s) | 194 |
| BshTI | ACCGGT | 1 cut(s) | 539 |
| BsiHKAI | GWGCWC | 2 cut(s) | 369, 394 |
| BsiSI | CCGG | 1 cut(s) | 540 |
| BslFI | GGGAC | 4 cut(s) | 2, 128, 830, 887 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 430, 529 |
| BsmAI | GTCTC | 1 cut(s) | 1159 |
| BsmFI | GGGAC | 4 cut(s) | 2, 128, 830, 887 |
| BsnI | GGCC | 1 cut(s) | 194 |
| Bso31I | GGTCTC | 1 cut(s) | 1159 |
| Bsp1286I | GDGCHC | 2 cut(s) | 369, 394 |
| Bsp143I | GATC | 6 cut(s) | 154, 337, 651, 709, 1081, 1183 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 825 |
| Bsp68I | TCGCGA | 2 cut(s) | 1110, 1212 |
| BspACI | CCGC | 3 cut(s) | 219, 413, 418 |
| BspANI | GGCC | 1 cut(s) | 194 |
| BspCNI | CTCAG | 6 cut(s) | 223, 655, 738, 817, 1039, 1141 |
| BspFNI | CGCG | 2 cut(s) | 1110, 1212 |
| BspLI | GGNNCC | 1 cut(s) | 818 |
| BspOI | GCTAGC | 1 cut(s) | 978 |
| BspPI | GGATC | 2 cut(s) | 149, 704 |
| BspQI | GCTCTTC | 1 cut(s) | 513 |
| BspTI | CTTAAG | 1 cut(s) | 806 |
| BspTNI | GGTCTC | 1 cut(s) | 1159 |
| BsrFI | RCCGGY | 1 cut(s) | 539 |
| BsrI | ACTGG | 2 cut(s) | 74, 523 |
| BssAI | RCCGGY | 1 cut(s) | 539 |
| BssECI | CCNNGG | 1 cut(s) | 189 |
| BssMI | GATC | 6 cut(s) | 154, 337, 651, 709, 1081, 1183 |
| BssNAI | GTATAC | 2 cut(s) | 1016, 1118 |
| Bst1107I | GTATAC | 2 cut(s) | 1016, 1118 |
| Bst2UI | CCWGG | 2 cut(s) | 190, 271 |
| Bst4CI | ACNGT | 3 cut(s) | 13, 468, 596 |
| Bst6I | CTCTTC | 3 cut(s) | 513, 806, 1065 |
| BstAFI | CTTAAG | 1 cut(s) | 806 |
| BstBAI | YACGTR | 4 cut(s) | 1021, 1040, 1123, 1142 |
| BstC8I | GCNNGC | 4 cut(s) | 99, 201, 976, 980 |
| BstDEI | CTNAG | 8 cut(s) | 231, 514, 580, 663, 746, 825, 1047, 1149 |
| BstF5I | GGATG | 3 cut(s) | 232, 1066, 1168 |
| BstFNI | CGCG | 2 cut(s) | 1110, 1212 |
| BstKTI | GATC | 6 cut(s) | 157, 340, 654, 712, 1084, 1186 |
| BstMAI | GTCTC | 1 cut(s) | 1159 |
| BstMBI | GATC | 6 cut(s) | 154, 337, 651, 709, 1081, 1183 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 200, 266, 953, 1188 |
| BstNI | CCWGG | 2 cut(s) | 190, 271 |
| BstNSI | RCATGY | 1 cut(s) | 398 |
| BstSCI | CCNGG | 2 cut(s) | 188, 269 |
| BstUI | CGCG | 2 cut(s) | 1110, 1212 |
| BstV1I | GCAGC | 2 cut(s) | 17, 407 |
| BstV2I | GAAGAC | 1 cut(s) | 315 |
| BstX2I | RGATCY | 1 cut(s) | 154 |
| BstYI | RGATCY | 1 cut(s) | 154 |
| BstZ17I | GTATAC | 2 cut(s) | 1016, 1118 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1047, 1149 |
| BsuI | GTATCC | 3 cut(s) | 631, 1052, 1154 |
| BsuRI | GGCC | 1 cut(s) | 194 |
| BtgZI | GCGATG | 1 cut(s) | 1125 |
| BtsCI | GGATG | 3 cut(s) | 232, 1066, 1168 |
| BtuMI | TCGCGA | 2 cut(s) | 1110, 1212 |
| Cac8I | GCNNGC | 4 cut(s) | 99, 201, 976, 980 |
| Cfr10I | RCCGGY | 1 cut(s) | 539 |
| Cfr13I | GGNCC | 3 cut(s) | 192, 415, 817 |
| CpoI | CGGWCCG | 1 cut(s) | 415 |
| Csp6I | GTAC | 3 cut(s) | 951, 1022, 1124 |
| CspAI | ACCGGT | 1 cut(s) | 539 |
| CspI | CGGWCCG | 1 cut(s) | 415 |
| CviAII | CATG | 3 cut(s) | 395, 894, 1221 |
| CviQI | GTAC | 3 cut(s) | 951, 1022, 1124 |
| DdeI | CTNAG | 8 cut(s) | 231, 514, 580, 663, 746, 825, 1047, 1149 |
| DpnI | GATC | 6 cut(s) | 156, 339, 653, 711, 1083, 1185 |
| DpnII | GATC | 6 cut(s) | 154, 337, 651, 709, 1081, 1183 |
| DraI | TTTAAA | 1 cut(s) | 936 |
| Eam1104I | CTCTTC | 3 cut(s) | 513, 806, 1065 |
| EarI | CTCTTC | 3 cut(s) | 513, 806, 1065 |
| Eco31I | GGTCTC | 1 cut(s) | 1159 |
| Eco47I | GGWCC | 2 cut(s) | 415, 817 |
| Eco57I | CTGAAG | 2 cut(s) | 123, 339 |
| Eco81I | CCTNAGG | 2 cut(s) | 1047, 1149 |
| EcoO109I | RGGNCCY | 1 cut(s) | 192 |
| EcoRII | CCWGG | 2 cut(s) | 188, 269 |
| EcoT22I | ATGCAT | 1 cut(s) | 943 |
| FaeI | CATG | 3 cut(s) | 398, 897, 1224 |
| FaqI | GGGAC | 4 cut(s) | 2, 128, 830, 887 |
| FatI | CATG | 3 cut(s) | 394, 893, 1220 |
| FauI | CCCGC | 1 cut(s) | 212 |
| FblI | GTMKAC | 3 cut(s) | 591, 1015, 1117 |
| Fnu4HI | GCNGC | 2 cut(s) | 6, 421 |
| FokI | GGATG | 3 cut(s) | 239, 1073, 1175 |
| Fsp4HI | GCNGC | 2 cut(s) | 6, 421 |
| FspBI | CTAG | 4 cut(s) | 21, 557, 629, 975 |
| GluI | GCNGC | 2 cut(s) | 6, 421 |
| GsuI | CTGGAG | 2 cut(s) | 365, 408 |
| HaeIII | GGCC | 1 cut(s) | 194 |
| HapII | CCGG | 1 cut(s) | 540 |
| Hin1II | CATG | 3 cut(s) | 398, 897, 1224 |
| HincII | GTYRAC | 1 cut(s) | 325 |
| HindII | GTYRAC | 1 cut(s) | 325 |
| HindIII | AAGCTT | 2 cut(s) | 168, 803 |
| HinfI | GANTC | 6 cut(s) | 233, 769, 926, 1099, 1201, 1236 |
| HpaII | CCGG | 1 cut(s) | 540 |
| HphI | GGTGA | 3 cut(s) | 371, 935, 1247 |
| Hpy166II | GTNNAC | 5 cut(s) | 325, 564, 592, 1016, 1118 |
| Hpy188III | TCNNGA | 7 cut(s) | 158, 253, 736, 911, 1067, 1109, 1211 |
| Hpy8I | GTNNAC | 5 cut(s) | 325, 564, 592, 1016, 1118 |
| Hpy99I | CGWCG | 1 cut(s) | 259 |
| HpyAV | CCTTC | 4 cut(s) | 119, 707, 723, 1262 |
| HpyCH4III | ACNGT | 3 cut(s) | 13, 468, 596 |
| HpyCH4IV | ACGT | 6 cut(s) | 117, 534, 1020, 1039, 1122, 1141 |
| HpyCH4V | TGCA | 4 cut(s) | 199, 398, 669, 941 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 200, 266, 953, 1188 |
| HpyF3I | CTNAG | 8 cut(s) | 231, 514, 580, 663, 746, 825, 1047, 1149 |
| HpySE526I | ACGT | 6 cut(s) | 117, 534, 1020, 1039, 1122, 1141 |
| Hsp92II | CATG | 3 cut(s) | 398, 897, 1224 |
| Kzo9I | GATC | 6 cut(s) | 154, 337, 651, 709, 1081, 1183 |
| LguI | GCTCTTC | 1 cut(s) | 513 |
| LmnI | GCTCC | 2 cut(s) | 346, 389 |
| Lsp1109I | GCAGC | 2 cut(s) | 17, 407 |
| LweI | GCATC | 2 cut(s) | 31, 217 |
| MaeI | CTAG | 4 cut(s) | 21, 557, 629, 975 |
| MaeII | ACGT | 6 cut(s) | 117, 534, 1020, 1039, 1122, 1141 |
| MaeIII | GTNAC | 2 cut(s) | 535, 596 |
| MalI | GATC | 6 cut(s) | 156, 339, 653, 711, 1083, 1185 |
| MboI | GATC | 6 cut(s) | 154, 337, 651, 709, 1081, 1183 |
| MboII | GAAGA | 9 cut(s) | 116, 164, 320, 500, 691, 823, 1082, 1108, 1210 |
| MflI | RGATCY | 1 cut(s) | 154 |
| MhlI | GDGCHC | 2 cut(s) | 369, 394 |
| MluCI | AATT | 6 cut(s) | 161, 351, 374, 427, 657, 1009 |
| MlyI | GAGTC | 3 cut(s) | 242, 763, 1230 |
| Mph1103I | ATGCAT | 1 cut(s) | 943 |
| MseI | TTAA | 9 cut(s) | 33, 48, 164, 243, 294, 470, 807, 878, 935 |
| MslI | CAYNNNNRTG | 1 cut(s) | 921 |
| MspA1I | CMGCKG | 3 cut(s) | 343, 420, 956 |
| MspCI | CTTAAG | 1 cut(s) | 806 |
| MspI | CCGG | 1 cut(s) | 540 |
| MspR9I | CCNGG | 2 cut(s) | 190, 271 |
| MvaI | CCWGG | 2 cut(s) | 190, 271 |
| MvnI | CGCG | 2 cut(s) | 1110, 1212 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 200, 266, 953, 1188 |
| NdeII | GATC | 6 cut(s) | 154, 337, 651, 709, 1081, 1183 |
| NheI | GCTAGC | 1 cut(s) | 974 |
| NlaIII | CATG | 3 cut(s) | 398, 897, 1224 |
| NlaIV | GGNNCC | 1 cut(s) | 818 |
| NmuCI | GTSAC | 1 cut(s) | 596 |
| NruI | TCGCGA | 2 cut(s) | 1110, 1212 |
| NsiI | ATGCAT | 1 cut(s) | 943 |
| NspI | RCATGY | 1 cut(s) | 398 |
| OliI | CACNNNNGTG | 1 cut(s) | 921 |
| PciSI | GCTCTTC | 1 cut(s) | 513 |
| PfeI | GAWTC | 3 cut(s) | 926, 1099, 1201 |
| PflFI | GACNNNGTC | 1 cut(s) | 119 |
| PinAI | ACCGGT | 1 cut(s) | 539 |
| PkrI | GCNGC | 2 cut(s) | 7, 422 |
| PleI | GAGTC | 3 cut(s) | 241, 763, 1230 |
| PpsI | GAGTC | 3 cut(s) | 241, 763, 1230 |
| Ppu21I | YACGTR | 4 cut(s) | 1021, 1040, 1123, 1142 |
| PsiI | TTATAA | 1 cut(s) | 1008 |
| Psp6I | CCWGG | 2 cut(s) | 188, 269 |
| PspGI | CCWGG | 2 cut(s) | 188, 269 |
| PspN4I | GGNNCC | 1 cut(s) | 818 |
| PspPI | GGNCC | 3 cut(s) | 192, 415, 817 |
| PsuI | RGATCY | 1 cut(s) | 154 |
| PsyI | GACNNNGTC | 1 cut(s) | 119 |
| PvuII | CAGCTG | 2 cut(s) | 343, 956 |
| RruI | TCGCGA | 2 cut(s) | 1110, 1212 |
| RsaI | GTAC | 3 cut(s) | 952, 1023, 1125 |
| RsaNI | GTAC | 3 cut(s) | 951, 1022, 1124 |
| RseI | CAYNNNNRTG | 1 cut(s) | 921 |
| Rsr2I | CGGWCCG | 1 cut(s) | 415 |
| RsrII | CGGWCCG | 1 cut(s) | 415 |
| SapI | GCTCTTC | 1 cut(s) | 513 |
| SaqAI | TTAA | 9 cut(s) | 33, 48, 164, 243, 294, 470, 807, 878, 935 |
| SatI | GCNGC | 2 cut(s) | 6, 421 |
| Sau3AI | GATC | 6 cut(s) | 154, 337, 651, 709, 1081, 1183 |
| Sau96I | GGNCC | 3 cut(s) | 192, 415, 817 |
| SchI | GAGTC | 3 cut(s) | 242, 763, 1230 |
| ScrFI | CCNGG | 2 cut(s) | 190, 271 |
| SduI | GDGCHC | 2 cut(s) | 369, 394 |
| SfaNI | GCATC | 2 cut(s) | 31, 217 |
| SinI | GGWCC | 2 cut(s) | 415, 817 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 921 |
| SmlI | CTYRAG | 2 cut(s) | 806, 909 |
| SmoI | CTYRAG | 2 cut(s) | 806, 909 |
| Sse9I | AATT | 6 cut(s) | 161, 351, 374, 427, 657, 1009 |
| SsiI | CCGC | 3 cut(s) | 219, 413, 418 |
| SspI | AATATT | 1 cut(s) | 277 |
| SspMI | CTAG | 4 cut(s) | 21, 557, 629, 975 |
| StyD4I | CCNGG | 2 cut(s) | 188, 269 |
| TaaI | ACNGT | 3 cut(s) | 13, 468, 596 |
| TaiI | ACGT | 6 cut(s) | 120, 537, 1023, 1042, 1125, 1144 |
| TaqI | TCGA | 3 cut(s) | 123, 654, 708 |
| TaqII | GACCGA | 1 cut(s) | 834 |
| TasI | AATT | 6 cut(s) | 161, 351, 374, 427, 657, 1009 |
| TfiI | GAWTC | 3 cut(s) | 926, 1099, 1201 |
| Tru1I | TTAA | 9 cut(s) | 33, 48, 164, 243, 294, 470, 807, 878, 935 |
| Tru9I | TTAA | 9 cut(s) | 33, 48, 164, 243, 294, 470, 807, 878, 935 |
| TseFI | GTSAC | 1 cut(s) | 596 |
| TseI | GCWGC | 2 cut(s) | 5, 420 |
| Tsp45I | GTSAC | 1 cut(s) | 596 |
| TspDTI | ATGAA | 2 cut(s) | 689, 1209 |
| TspGWI | ACGGA | 1 cut(s) | 615 |
| Tth111I | GACNNNGTC | 1 cut(s) | 119 |
| Vha464I | CTTAAG | 1 cut(s) | 806 |
| VpaK11BI | GGWCC | 2 cut(s) | 415, 817 |
| XceI | RCATGY | 1 cut(s) | 398 |
| XmiI | GTMKAC | 3 cut(s) | 591, 1015, 1117 |
| XspI | CTAG | 4 cut(s) | 21, 557, 629, 975 |
| Zsp2I | ATGCAT | 1 cut(s) | 943 |