protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 3 - 93 | 2.9e-16 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 23 |
| AciI | CCGC | 1 cut(s) | 21 |
| AcsI | RAATTY | 1 cut(s) | 298 |
| AgsI | TTSAA | 1 cut(s) | 317 |
| AjnI | CCWGG | 3 cut(s) | 25, 406, 434 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 435 |
| ApeKI | GCWGC | 1 cut(s) | 266 |
| ApoI | RAATTY | 1 cut(s) | 298 |
| AspS9I | GGNCC | 1 cut(s) | 404 |
| AsuHPI | GGTGA | 3 cut(s) | 10, 299, 337 |
| AvaII | GGWCC | 1 cut(s) | 404 |
| BbsI | GAAGAC | 1 cut(s) | 44 |
| BbvI | GCAGC | 1 cut(s) | 253 |
| BceAI | ACGGC | 1 cut(s) | 254 |
| BciT130I | CCWGG | 3 cut(s) | 27, 408, 436 |
| BfmI | CTRYAG | 1 cut(s) | 9 |
| BisI | GCNGC | 1 cut(s) | 267 |
| BlsI | GCNGC | 1 cut(s) | 268 |
| Bme1390I | CCNGG | 3 cut(s) | 27, 408, 436 |
| Bme18I | GGWCC | 1 cut(s) | 404 |
| BmgT120I | GGNCC | 1 cut(s) | 404 |
| BmrFI | CCNGG | 3 cut(s) | 27, 408, 436 |
| BmsI | GCATC | 2 cut(s) | 197, 351 |
| BpiI | GAAGAC | 1 cut(s) | 44 |
| BsaBI | GATNNNNATC | 1 cut(s) | 89 |
| BsaJI | CCNNGG | 1 cut(s) | 434 |
| Bse1I | ACTGG | 1 cut(s) | 289 |
| Bse8I | GATNNNNATC | 1 cut(s) | 89 |
| BseBI | CCWGG | 3 cut(s) | 27, 408, 436 |
| BseDI | CCNNGG | 1 cut(s) | 434 |
| BseGI | GGATG | 3 cut(s) | 106, 119, 366 |
| BseJI | GATNNNNATC | 1 cut(s) | 89 |
| BseMII | CTCAG | 1 cut(s) | 144 |
| BseNI | ACTGG | 1 cut(s) | 289 |
| BseXI | GCAGC | 1 cut(s) | 253 |
| BsmI | GAATGC | 1 cut(s) | 14 |
| Bsp143I | GATC | 2 cut(s) | 210, 342 |
| BspACI | CCGC | 1 cut(s) | 21 |
| BspCNI | CTCAG | 1 cut(s) | 143 |
| BsrBI | CCGCTC | 1 cut(s) | 23 |
| BsrI | ACTGG | 1 cut(s) | 289 |
| BssECI | CCNNGG | 1 cut(s) | 434 |
| BssMI | GATC | 2 cut(s) | 210, 342 |
| Bst2UI | CCWGG | 3 cut(s) | 27, 408, 436 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 263 |
| BstC8I | GCNNGC | 2 cut(s) | 6, 330 |
| BstDEI | CTNAG | 1 cut(s) | 130 |
| BstF5I | GGATG | 3 cut(s) | 106, 119, 366 |
| BstKTI | GATC | 2 cut(s) | 213, 345 |
| BstMBI | GATC | 2 cut(s) | 210, 342 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 20, 263 |
| BstNI | CCWGG | 3 cut(s) | 27, 408, 436 |
| BstSCI | CCNGG | 3 cut(s) | 25, 406, 434 |
| BstSFI | CTRYAG | 1 cut(s) | 9 |
| BstV1I | GCAGC | 1 cut(s) | 253 |
| BstV2I | GAAGAC | 1 cut(s) | 44 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 64 |
| BtsCI | GGATG | 3 cut(s) | 106, 119, 366 |
| Cac8I | GCNNGC | 2 cut(s) | 6, 330 |
| CaiI | CAGNNNCTG | 1 cut(s) | 435 |
| Cfr13I | GGNCC | 1 cut(s) | 404 |
| CviAII | CATG | 1 cut(s) | 64 |
| CviJI | RGCY | 1 cut(s) | 332 |
| CviKI_1 | RGCY | 1 cut(s) | 332 |
| DdeI | CTNAG | 1 cut(s) | 130 |
| DpnI | GATC | 2 cut(s) | 212, 344 |
| DpnII | GATC | 2 cut(s) | 210, 342 |
| Eco47I | GGWCC | 1 cut(s) | 404 |
| EcoRII | CCWGG | 3 cut(s) | 25, 406, 434 |
| FaeI | CATG | 1 cut(s) | 67 |
| FatI | CATG | 1 cut(s) | 63 |
| Fnu4HI | GCNGC | 1 cut(s) | 267 |
| FokI | GGATG | 3 cut(s) | 106, 113, 373 |
| Fsp4HI | GCNGC | 1 cut(s) | 267 |
| GluI | GCNGC | 1 cut(s) | 267 |
| Hin1II | CATG | 1 cut(s) | 67 |
| HinfI | GANTC | 1 cut(s) | 150 |
| HphI | GGTGA | 3 cut(s) | 10, 299, 337 |
| Hpy188I | TCNGA | 3 cut(s) | 100, 342, 431 |
| Hpy99I | CGWCG | 1 cut(s) | 380 |
| HpyAV | CCTTC | 1 cut(s) | 418 |
| HpyCH4IV | ACGT | 1 cut(s) | 163 |
| HpyCH4V | TGCA | 3 cut(s) | 170, 257, 364 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 20, 263 |
| HpyF3I | CTNAG | 1 cut(s) | 130 |
| HpySE526I | ACGT | 1 cut(s) | 163 |
| Hsp92II | CATG | 1 cut(s) | 67 |
| Kzo9I | GATC | 2 cut(s) | 210, 342 |
| LmnI | GCTCC | 1 cut(s) | 28 |
| LpnPI | CCDG | 8 cut(s) | 12, 33, 39, 270, 314, 393, 420, 421 |
| Lsp1109I | GCAGC | 1 cut(s) | 253 |
| LweI | GCATC | 2 cut(s) | 197, 351 |
| MaeII | ACGT | 1 cut(s) | 163 |
| MaeIII | GTNAC | 2 cut(s) | 41, 115 |
| MalI | GATC | 2 cut(s) | 212, 344 |
| MbiI | CCGCTC | 1 cut(s) | 23 |
| MboI | GATC | 2 cut(s) | 210, 342 |
| MboII | GAAGA | 3 cut(s) | 44, 185, 329 |
| MluCI | AATT | 3 cut(s) | 135, 237, 298 |
| MnlI | CCTC | 5 cut(s) | 139, 164, 194, 242, 383 |
| MseI | TTAA | 2 cut(s) | 81, 417 |
| MslI | CAYNNNNRTG | 2 cut(s) | 62, 278 |
| MspR9I | CCNGG | 3 cut(s) | 27, 408, 436 |
| Mva1269I | GAATGC | 1 cut(s) | 14 |
| MvaI | CCWGG | 3 cut(s) | 27, 408, 436 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 20, 263 |
| NdeII | GATC | 2 cut(s) | 210, 342 |
| NlaIII | CATG | 1 cut(s) | 67 |
| NmuCI | GTSAC | 1 cut(s) | 115 |
| PctI | GAATGC | 1 cut(s) | 14 |
| PfeI | GAWTC | 1 cut(s) | 150 |
| PkrI | GCNGC | 1 cut(s) | 268 |
| Psp6I | CCWGG | 3 cut(s) | 25, 406, 434 |
| PspGI | CCWGG | 3 cut(s) | 25, 406, 434 |
| PspPI | GGNCC | 1 cut(s) | 404 |
| PstNI | CAGNNNCTG | 1 cut(s) | 435 |
| RseI | CAYNNNNRTG | 2 cut(s) | 62, 278 |
| SaqAI | TTAA | 2 cut(s) | 81, 417 |
| SatI | GCNGC | 1 cut(s) | 267 |
| Sau3AI | GATC | 2 cut(s) | 210, 342 |
| Sau96I | GGNCC | 1 cut(s) | 404 |
| ScrFI | CCNGG | 3 cut(s) | 27, 408, 436 |
| SetI | ASST | 6 cut(s) | 52, 131, 166, 350, 401, 429 |
| SfaNI | GCATC | 2 cut(s) | 197, 351 |
| SfcI | CTRYAG | 1 cut(s) | 9 |
| SinI | GGWCC | 1 cut(s) | 404 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 62, 278 |
| Sse9I | AATT | 3 cut(s) | 135, 237, 298 |
| SsiI | CCGC | 1 cut(s) | 21 |
| SspI | AATATT | 1 cut(s) | 414 |
| StyD4I | CCNGG | 3 cut(s) | 25, 406, 434 |
| TaiI | ACGT | 1 cut(s) | 166 |
| TaqII | GACCGA | 1 cut(s) | 203 |
| TasI | AATT | 3 cut(s) | 135, 237, 298 |
| TfiI | GAWTC | 1 cut(s) | 150 |
| Tru1I | TTAA | 2 cut(s) | 81, 417 |
| Tru9I | TTAA | 2 cut(s) | 81, 417 |
| TseFI | GTSAC | 1 cut(s) | 115 |
| TseI | GCWGC | 1 cut(s) | 266 |
| Tsp45I | GTSAC | 1 cut(s) | 115 |
| TspDTI | ATGAA | 2 cut(s) | 52, 379 |
| VpaK11BI | GGWCC | 1 cut(s) | 404 |
| XapI | RAATTY | 1 cut(s) | 298 |