protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 8 - 118 | 1.5e-22 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 84 |
| AcuI | CTGAAG | 2 cut(s) | 156, 189 |
| AfaI | GTAC | 2 cut(s) | 46, 118 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 389 |
| AgsI | TTSAA | 1 cut(s) | 490 |
| AjnI | CCWGG | 2 cut(s) | 100, 388 |
| AluBI | AGCT | 1 cut(s) | 170 |
| AluI | AGCT | 1 cut(s) | 170 |
| AoxI | GGCC | 1 cut(s) | 343 |
| ApeKI | GCWGC | 1 cut(s) | 86 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 370 |
| AspS9I | GGNCC | 1 cut(s) | 476 |
| AsuC2I | CCSGG | 1 cut(s) | 480 |
| AvaII | GGWCC | 1 cut(s) | 476 |
| BbvI | GCAGC | 1 cut(s) | 98 |
| BccI | CCATC | 1 cut(s) | 80 |
| BciT130I | CCWGG | 2 cut(s) | 102, 390 |
| BciVI | GTATCC | 1 cut(s) | 419 |
| BcnI | CCSGG | 1 cut(s) | 480 |
| BfaI | CTAG | 1 cut(s) | 405 |
| BfuI | GTATCC | 1 cut(s) | 419 |
| BisI | GCNGC | 2 cut(s) | 84, 87 |
| BlsI | GCNGC | 2 cut(s) | 85, 88 |
| Bme1390I | CCNGG | 3 cut(s) | 102, 390, 480 |
| Bme18I | GGWCC | 1 cut(s) | 476 |
| BmgT120I | GGNCC | 1 cut(s) | 476 |
| BmiI | GGNNCC | 1 cut(s) | 381 |
| BmrFI | CCNGG | 3 cut(s) | 102, 390, 480 |
| BmrI | ACTGGG | 1 cut(s) | 407 |
| BmsI | GCATC | 1 cut(s) | 402 |
| BmuI | ACTGGG | 1 cut(s) | 407 |
| BpuMI | CCSGG | 1 cut(s) | 480 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 389 |
| Bse1I | ACTGG | 1 cut(s) | 413 |
| BseBI | CCWGG | 2 cut(s) | 102, 390 |
| BseGI | GGATG | 1 cut(s) | 438 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 389 |
| BseNI | ACTGG | 1 cut(s) | 413 |
| BseXI | GCAGC | 1 cut(s) | 98 |
| BsgI | GTGCAG | 1 cut(s) | 473 |
| BshFI | GGCC | 1 cut(s) | 345 |
| BsiSI | CCGG | 1 cut(s) | 479 |
| BslFI | GGGAC | 1 cut(s) | 43 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 389 |
| BsmFI | GGGAC | 1 cut(s) | 43 |
| BsmI | GAATGC | 2 cut(s) | 89, 126 |
| BsnI | GGCC | 1 cut(s) | 345 |
| Bsp1407I | TGTACA | 1 cut(s) | 44 |
| Bsp143I | GATC | 1 cut(s) | 327 |
| BspACI | CCGC | 1 cut(s) | 84 |
| BspANI | GGCC | 1 cut(s) | 345 |
| BspLI | GGNNCC | 1 cut(s) | 381 |
| BsrGI | TGTACA | 1 cut(s) | 44 |
| BsrI | ACTGG | 1 cut(s) | 413 |
| BssMI | GATC | 1 cut(s) | 327 |
| Bst2UI | CCWGG | 2 cut(s) | 102, 390 |
| Bst4CI | ACNGT | 2 cut(s) | 49, 507 |
| Bst6I | CTCTTC | 2 cut(s) | 243, 308 |
| BstAUI | TGTACA | 1 cut(s) | 44 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 387 |
| BstF5I | GGATG | 1 cut(s) | 438 |
| BstKTI | GATC | 1 cut(s) | 330 |
| BstMBI | GATC | 1 cut(s) | 327 |
| BstNI | CCWGG | 2 cut(s) | 102, 390 |
| BstSCI | CCNGG | 3 cut(s) | 100, 388, 478 |
| BstV1I | GCAGC | 1 cut(s) | 98 |
| BsuI | GTATCC | 1 cut(s) | 419 |
| BsuRI | GGCC | 1 cut(s) | 345 |
| BtgZI | GCGATG | 1 cut(s) | 292 |
| BtsCI | GGATG | 1 cut(s) | 438 |
| BtsIMutI | CAGTG | 2 cut(s) | 420, 512 |
| Cfr13I | GGNCC | 1 cut(s) | 476 |
| Csp6I | GTAC | 2 cut(s) | 45, 117 |
| CviAII | CATG | 4 cut(s) | 76, 322, 362, 375 |
| CviJI | RGCY | 2 cut(s) | 170, 345 |
| CviKI_1 | RGCY | 2 cut(s) | 170, 345 |
| CviQI | GTAC | 2 cut(s) | 45, 117 |
| DpnI | GATC | 1 cut(s) | 329 |
| DpnII | GATC | 1 cut(s) | 327 |
| Eam1104I | CTCTTC | 2 cut(s) | 243, 308 |
| EarI | CTCTTC | 2 cut(s) | 243, 308 |
| Eco47I | GGWCC | 1 cut(s) | 476 |
| Eco57I | CTGAAG | 2 cut(s) | 156, 189 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 387 |
| EcoRII | CCWGG | 2 cut(s) | 100, 388 |
| FaeI | CATG | 4 cut(s) | 79, 325, 365, 378 |
| FaqI | GGGAC | 1 cut(s) | 43 |
| FatI | CATG | 4 cut(s) | 75, 321, 361, 374 |
| Fnu4HI | GCNGC | 2 cut(s) | 84, 87 |
| FokI | GGATG | 1 cut(s) | 445 |
| Fsp4HI | GCNGC | 2 cut(s) | 84, 87 |
| FspBI | CTAG | 1 cut(s) | 405 |
| GluI | GCNGC | 2 cut(s) | 84, 87 |
| HaeIII | GGCC | 1 cut(s) | 345 |
| HapII | CCGG | 1 cut(s) | 479 |
| Hin1II | CATG | 4 cut(s) | 79, 325, 365, 378 |
| HinfI | GANTC | 1 cut(s) | 225 |
| HpaII | CCGG | 1 cut(s) | 479 |
| Hpy188I | TCNGA | 1 cut(s) | 175 |
| HpyCH4III | ACNGT | 2 cut(s) | 49, 507 |
| HpyCH4IV | ACGT | 1 cut(s) | 238 |
| HpyCH4V | TGCA | 2 cut(s) | 245, 454 |
| HpySE526I | ACGT | 1 cut(s) | 238 |
| Hsp92II | CATG | 4 cut(s) | 79, 325, 365, 378 |
| Kzo9I | GATC | 1 cut(s) | 327 |
| LpnPI | CCDG | 8 cut(s) | 87, 108, 114, 375, 402, 426, 478, 492 |
| Lsp1109I | GCAGC | 1 cut(s) | 98 |
| LweI | GCATC | 1 cut(s) | 402 |
| MaeI | CTAG | 1 cut(s) | 405 |
| MaeII | ACGT | 1 cut(s) | 238 |
| MaeIII | GTNAC | 2 cut(s) | 67, 415 |
| MalI | GATC | 1 cut(s) | 329 |
| MboI | GATC | 1 cut(s) | 327 |
| MboII | GAAGA | 2 cut(s) | 260, 295 |
| MluCI | AATT | 1 cut(s) | 96 |
| MnlI | CCTC | 7 cut(s) | 197, 239, 244, 269, 311, 430, 455 |
| MroXI | GAANNNNTTC | 1 cut(s) | 370 |
| MseI | TTAA | 1 cut(s) | 296 |
| MslI | CAYNNNNRTG | 4 cut(s) | 131, 278, 323, 427 |
| MspI | CCGG | 1 cut(s) | 479 |
| MspR9I | CCNGG | 3 cut(s) | 102, 390, 480 |
| Mva1269I | GAATGC | 2 cut(s) | 89, 126 |
| MvaI | CCWGG | 2 cut(s) | 102, 390 |
| NciI | CCSGG | 1 cut(s) | 480 |
| NdeII | GATC | 1 cut(s) | 327 |
| NlaIII | CATG | 4 cut(s) | 79, 325, 365, 378 |
| NlaIV | GGNNCC | 1 cut(s) | 381 |
| NmuCI | GTSAC | 1 cut(s) | 415 |
| PctI | GAATGC | 2 cut(s) | 89, 126 |
| PdmI | GAANNNNTTC | 1 cut(s) | 370 |
| PfeI | GAWTC | 1 cut(s) | 225 |
| PkrI | GCNGC | 2 cut(s) | 85, 88 |
| Psp6I | CCWGG | 2 cut(s) | 100, 388 |
| PspGI | CCWGG | 2 cut(s) | 100, 388 |
| PspN4I | GGNNCC | 1 cut(s) | 381 |
| PspPI | GGNCC | 1 cut(s) | 476 |
| RsaI | GTAC | 2 cut(s) | 46, 118 |
| RsaNI | GTAC | 2 cut(s) | 45, 117 |
| RseI | CAYNNNNRTG | 4 cut(s) | 131, 278, 323, 427 |
| SaqAI | TTAA | 1 cut(s) | 296 |
| SatI | GCNGC | 2 cut(s) | 84, 87 |
| Sau3AI | GATC | 1 cut(s) | 327 |
| Sau96I | GGNCC | 1 cut(s) | 476 |
| ScrFI | CCNGG | 3 cut(s) | 102, 390, 480 |
| SetI | ASST | 5 cut(s) | 58, 172, 241, 292, 422 |
| SfaNI | GCATC | 1 cut(s) | 402 |
| SinI | GGWCC | 1 cut(s) | 476 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 131, 278, 323, 427 |
| Sse9I | AATT | 1 cut(s) | 96 |
| SsiI | CCGC | 1 cut(s) | 84 |
| SspI | AATATT | 2 cut(s) | 371, 486 |
| SspMI | CTAG | 1 cut(s) | 405 |
| StyD4I | CCNGG | 3 cut(s) | 100, 388, 478 |
| TaaI | ACNGT | 2 cut(s) | 49, 507 |
| TaiI | ACGT | 1 cut(s) | 241 |
| TasI | AATT | 1 cut(s) | 96 |
| TatI | WGTACW | 1 cut(s) | 44 |
| TauI | GCSGC | 1 cut(s) | 86 |
| TfiI | GAWTC | 1 cut(s) | 225 |
| Tru1I | TTAA | 1 cut(s) | 296 |
| Tru9I | TTAA | 1 cut(s) | 296 |
| TscAI | CASTG | 2 cut(s) | 420, 512 |
| TseFI | GTSAC | 1 cut(s) | 415 |
| TseI | GCWGC | 1 cut(s) | 86 |
| Tsp45I | GTSAC | 1 cut(s) | 415 |
| TspDTI | ATGAA | 6 cut(s) | 38, 127, 295, 350, 363, 451 |
| TspRI | CASTG | 2 cut(s) | 420, 512 |
| VpaK11BI | GGWCC | 1 cut(s) | 476 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 387 |
| XmnI | GAANNNNTTC | 1 cut(s) | 370 |
| XspI | CTAG | 1 cut(s) | 405 |