protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 132 - 197 | 1.5e-14 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 96 |
| AciI | CCGC | 3 cut(s) | 444, 465, 560 |
| AcsI | RAATTY | 2 cut(s) | 299, 589 |
| AfaI | GTAC | 1 cut(s) | 406 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 387 |
| AgeI | ACCGGT | 1 cut(s) | 482 |
| AgsI | TTSAA | 7 cut(s) | 8, 62, 74, 262, 315, 361, 595 |
| AluBI | AGCT | 3 cut(s) | 112, 200, 398 |
| AluI | AGCT | 3 cut(s) | 112, 200, 398 |
| Alw21I | GWGCWC | 2 cut(s) | 114, 421 |
| ApeKI | GCWGC | 3 cut(s) | 182, 395, 446 |
| ApoI | RAATTY | 2 cut(s) | 299, 589 |
| AsiGI | ACCGGT | 1 cut(s) | 482 |
| AsuC2I | CCSGG | 2 cut(s) | 17, 462 |
| AsuHPI | GGTGA | 2 cut(s) | 488, 580 |
| BanII | GRGCYC | 1 cut(s) | 114 |
| BauI | CACGAG | 1 cut(s) | 327 |
| BbsI | GAAGAC | 1 cut(s) | 479 |
| Bbv12I | GWGCWC | 2 cut(s) | 114, 421 |
| BbvI | GCAGC | 3 cut(s) | 169, 407, 458 |
| BcnI | CCSGG | 2 cut(s) | 17, 462 |
| BfmI | CTRYAG | 1 cut(s) | 251 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 560 |
| BisI | GCNGC | 5 cut(s) | 183, 396, 444, 447, 561 |
| BlsI | GCNGC | 5 cut(s) | 184, 397, 445, 448, 562 |
| Bme1390I | CCNGG | 2 cut(s) | 17, 462 |
| BmrFI | CCNGG | 2 cut(s) | 17, 462 |
| BmrI | ACTGGG | 1 cut(s) | 279 |
| BmsI | GCATC | 2 cut(s) | 214, 250 |
| BmuI | ACTGGG | 1 cut(s) | 279 |
| BoxI | GACNNNNGTC | 1 cut(s) | 483 |
| BpiI | GAAGAC | 1 cut(s) | 479 |
| BpuEI | CTTGAG | 1 cut(s) | 98 |
| BpuMI | CCSGG | 2 cut(s) | 17, 462 |
| BsaWI | WCCGGW | 1 cut(s) | 482 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 263, 293 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 387 |
| Bse118I | RCCGGY | 1 cut(s) | 482 |
| Bse1I | ACTGG | 1 cut(s) | 285 |
| Bse3DI | GCAATG | 1 cut(s) | 549 |
| BseGI | GGATG | 3 cut(s) | 205, 229, 370 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 387 |
| BseMI | GCAATG | 1 cut(s) | 549 |
| BseMII | CTCAG | 1 cut(s) | 546 |
| BseNI | ACTGG | 1 cut(s) | 285 |
| BseXI | GCAGC | 3 cut(s) | 169, 407, 458 |
| BsgI | GTGCAG | 1 cut(s) | 168 |
| BshTI | ACCGGT | 1 cut(s) | 482 |
| BsiHKAI | GWGCWC | 2 cut(s) | 114, 421 |
| BsiSI | CCGG | 3 cut(s) | 17, 462, 483 |
| BslFI | GGGAC | 2 cut(s) | 143, 481 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 387 |
| BsmFI | GGGAC | 2 cut(s) | 143, 481 |
| BsmI | GAATGC | 1 cut(s) | 449 |
| Bsp1286I | GDGCHC | 2 cut(s) | 114, 421 |
| Bsp1407I | TGTACA | 1 cut(s) | 404 |
| BspACI | CCGC | 3 cut(s) | 444, 465, 560 |
| BspCNI | CTCAG | 1 cut(s) | 545 |
| BsrDI | GCAATG | 1 cut(s) | 549 |
| BsrFI | RCCGGY | 1 cut(s) | 482 |
| BsrGI | TGTACA | 1 cut(s) | 404 |
| BsrI | ACTGG | 1 cut(s) | 285 |
| BssAI | RCCGGY | 1 cut(s) | 482 |
| BssSI | CACGAG | 1 cut(s) | 327 |
| Bst2BI | CACGAG | 1 cut(s) | 327 |
| Bst4CI | ACNGT | 3 cut(s) | 255, 412, 457 |
| Bst6I | CTCTTC | 1 cut(s) | 44 |
| BstAUI | TGTACA | 1 cut(s) | 404 |
| BstDEI | CTNAG | 1 cut(s) | 532 |
| BstF5I | GGATG | 3 cut(s) | 205, 229, 370 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 17, 560 |
| BstNSI | RCATGY | 1 cut(s) | 218 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 483 |
| BstSCI | CCNGG | 2 cut(s) | 15, 460 |
| BstSFI | CTRYAG | 1 cut(s) | 251 |
| BstV1I | GCAGC | 3 cut(s) | 169, 407, 458 |
| BstV2I | GAAGAC | 1 cut(s) | 479 |
| BtsCI | GGATG | 3 cut(s) | 205, 229, 370 |
| BtsIMutI | CAGTG | 2 cut(s) | 260, 292 |
| Cfr10I | RCCGGY | 1 cut(s) | 482 |
| Csp6I | GTAC | 1 cut(s) | 405 |
| CspAI | ACCGGT | 1 cut(s) | 482 |
| CviAII | CATG | 1 cut(s) | 215 |
| CviJI | RGCY | 5 cut(s) | 112, 118, 200, 398, 563 |
| CviKI_1 | RGCY | 5 cut(s) | 112, 118, 200, 398, 563 |
| CviQI | GTAC | 1 cut(s) | 405 |
| DdeI | CTNAG | 1 cut(s) | 532 |
| Eam1104I | CTCTTC | 1 cut(s) | 44 |
| EarI | CTCTTC | 1 cut(s) | 44 |
| Ecl136II | GAGCTC | 1 cut(s) | 112 |
| Eco24I | GRGCYC | 1 cut(s) | 114 |
| Eco53kI | GAGCTC | 1 cut(s) | 112 |
| EcoICRI | GAGCTC | 1 cut(s) | 112 |
| EcoRI | GAATTC | 1 cut(s) | 299 |
| EcoT22I | ATGCAT | 1 cut(s) | 243 |
| EcoT38I | GRGCYC | 1 cut(s) | 114 |
| FaeI | CATG | 1 cut(s) | 218 |
| FaqI | GGGAC | 2 cut(s) | 143, 481 |
| FatI | CATG | 1 cut(s) | 214 |
| FauI | CCCGC | 1 cut(s) | 458 |
| Fnu4HI | GCNGC | 5 cut(s) | 183, 396, 444, 447, 561 |
| FokI | GGATG | 3 cut(s) | 192, 236, 377 |
| FriOI | GRGCYC | 1 cut(s) | 114 |
| Fsp4HI | GCNGC | 5 cut(s) | 183, 396, 444, 447, 561 |
| GluI | GCNGC | 5 cut(s) | 183, 396, 444, 447, 561 |
| HapII | CCGG | 3 cut(s) | 17, 462, 483 |
| Hin1II | CATG | 1 cut(s) | 218 |
| HpaII | CCGG | 3 cut(s) | 17, 462, 483 |
| HphI | GGTGA | 2 cut(s) | 488, 580 |
| Hpy166II | GTNNAC | 1 cut(s) | 28 |
| Hpy188I | TCNGA | 4 cut(s) | 162, 210, 344, 535 |
| Hpy188III | TCNNGA | 2 cut(s) | 221, 245 |
| Hpy8I | GTNNAC | 1 cut(s) | 28 |
| HpyAV | CCTTC | 1 cut(s) | 355 |
| HpyCH4III | ACNGT | 3 cut(s) | 255, 412, 457 |
| HpyCH4IV | ACGT | 1 cut(s) | 575 |
| HpyCH4V | TGCA | 7 cut(s) | 185, 227, 235, 241, 395, 502, 602 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 17, 560 |
| HpyF3I | CTNAG | 1 cut(s) | 532 |
| HpySE526I | ACGT | 1 cut(s) | 575 |
| Hsp92II | CATG | 1 cut(s) | 218 |
| LpnPI | CCDG | 6 cut(s) | 30, 132, 206, 298, 475, 496 |
| Lsp1109I | GCAGC | 3 cut(s) | 169, 407, 458 |
| LweI | GCATC | 2 cut(s) | 214, 250 |
| MaeII | ACGT | 1 cut(s) | 575 |
| MaeIII | GTNAC | 3 cut(s) | 279, 427, 476 |
| MboII | GAAGA | 2 cut(s) | 61, 479 |
| MhlI | GDGCHC | 2 cut(s) | 114, 421 |
| MluCI | AATT | 3 cut(s) | 299, 356, 589 |
| MnlI | CCTC | 2 cut(s) | 259, 565 |
| Mph1103I | ATGCAT | 1 cut(s) | 243 |
| MseI | TTAA | 2 cut(s) | 587, 607 |
| MspI | CCGG | 3 cut(s) | 17, 462, 483 |
| MspR9I | CCNGG | 2 cut(s) | 17, 462 |
| Mva1269I | GAATGC | 1 cut(s) | 449 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 17, 560 |
| NciI | CCSGG | 2 cut(s) | 17, 462 |
| NlaIII | CATG | 1 cut(s) | 218 |
| NmuCI | GTSAC | 1 cut(s) | 476 |
| NsiI | ATGCAT | 1 cut(s) | 243 |
| NspI | RCATGY | 1 cut(s) | 218 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 572 |
| PctI | GAATGC | 1 cut(s) | 449 |
| PinAI | ACCGGT | 1 cut(s) | 482 |
| PkrI | GCNGC | 5 cut(s) | 184, 397, 445, 448, 562 |
| PshAI | GACNNNNGTC | 1 cut(s) | 483 |
| PsiI | TTATAA | 1 cut(s) | 96 |
| Psp124BI | GAGCTC | 1 cut(s) | 114 |
| RsaI | GTAC | 1 cut(s) | 406 |
| RsaNI | GTAC | 1 cut(s) | 405 |
| SacI | GAGCTC | 1 cut(s) | 114 |
| SaqAI | TTAA | 2 cut(s) | 587, 607 |
| SatI | GCNGC | 5 cut(s) | 183, 396, 444, 447, 561 |
| ScrFI | CCNGG | 2 cut(s) | 17, 462 |
| SduI | GDGCHC | 2 cut(s) | 114, 421 |
| SetI | ASST | 6 cut(s) | 114, 202, 270, 400, 418, 578 |
| SfaNI | GCATC | 2 cut(s) | 214, 250 |
| SfcI | CTRYAG | 1 cut(s) | 251 |
| SmlI | CTYRAG | 1 cut(s) | 113 |
| SmoI | CTYRAG | 1 cut(s) | 113 |
| Sse9I | AATT | 3 cut(s) | 299, 356, 589 |
| SsiI | CCGC | 3 cut(s) | 444, 465, 560 |
| SstI | GAGCTC | 1 cut(s) | 114 |
| StyD4I | CCNGG | 2 cut(s) | 15, 460 |
| TaaI | ACNGT | 3 cut(s) | 255, 412, 457 |
| TaiI | ACGT | 1 cut(s) | 578 |
| TasI | AATT | 3 cut(s) | 299, 356, 589 |
| TatI | WGTACW | 1 cut(s) | 404 |
| TauI | GCSGC | 2 cut(s) | 446, 563 |
| Tru1I | TTAA | 2 cut(s) | 587, 607 |
| Tru9I | TTAA | 2 cut(s) | 587, 607 |
| TscAI | CASTG | 2 cut(s) | 260, 292 |
| TseFI | GTSAC | 1 cut(s) | 476 |
| TseI | GCWGC | 3 cut(s) | 182, 395, 446 |
| Tsp45I | GTSAC | 1 cut(s) | 476 |
| TspDTI | ATGAA | 3 cut(s) | 312, 328, 381 |
| TspRI | CASTG | 2 cut(s) | 260, 292 |
| XapI | RAATTY | 2 cut(s) | 299, 589 |
| XceI | RCATGY | 1 cut(s) | 218 |
| Zsp2I | ATGCAT | 1 cut(s) | 243 |