Prupe.2G033900_v2.0.a1

Domain of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000027
Physical Location & Seq
Forward (+)
3644172 .. 3650688
6517 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G033900.1

Sequence Viewer

Length: 1539 bp
ATGGTTGAGTGCATGGTTGTAAAGAACAGGAATCTACTTGATATGGTCGAAGAGTCCCACGGTCTGACACCAATTCTCTTCGCTGCTAAAAATGACTTATGGGATATTGTTCATTATCTGTATCCCCTCACGATCGAAGACCTAAAGCCAGAGAAGGGCCCTTATGGCGCTGGACTTGTTTGCTTTTGTTTCTATGCCAAACAATTTGATATTGCCTTGGACTTACTTCAGCGCTGCCCACGATTGGCCATTACTAAAGGCCCGACGGGCGAATCCCCTATATTTGTATTGGCAGATATTCCTTCTGTATTCCCGAGTGGGACGCTGCTCAAATTTTGGCAACGGTGGATCTATGACTGTATACACATACAGCCTCCTGCTATCCCTGATGTTAGTGTAAATGTTCAAAATCCAGAAATTGAACTGGGTAGCCAAAGAAATATCAGTTTCTCAGGTTTATTGCAGGGGCTTTCTTCTACCCTCCACAACCTTTTAGGGATCAACCACATATGTGAAATGAAATTGATCCATGATCGCTCGCTTTATATTTTGGACCACATGTTATATAGAGCGGTAAAAGATGTAGATATCCAAGAAAGGGAAGATGGCCTTGTCTATGAAGCAGTATTCCAAGCTGTCCGAAGAGGGATTATTGAGTTCGTTATTCGTTTATGTAAAGTAGATCCGGATGTATTGTGGCGAAACAATTCAATGGGAAGGAACATATTTCACTATTCAATTGAGTGTCGCCAGGAAAAAGTTTATAGCCTTATATATGGGGTTCGTCAAAGAAATCTTATTGCAACATTTTCAGATGCTTTTGGAAATGATATGCTACATCTTGCAGGGATGCTATCTCCAACGGAAAAACTTGATCGTATTTCAGGTGCAGCCTTGCAAATGCAGAGAGAAAGACAATGGTTCAAGGAGGTTAAGAGTACTGTAGTTTTACCCTCGGGAGTGAGAGCTTTCAATAAAGAGGGTAAGAGACCCCATGAACTATTTACCCAGAACCACAAGAAATTGAAGGAAGAAGGAGAAAAGTGGATGAAAGATGCAGCAACTTCTTGTACAGTTGTAGGTGCTCTCACTATTACCATCATGTTTGCTGCAGCCTTCACAGTTCCTGGTGGAAACAATGGAGGAACAGGCTTTCCCATATTCTTACATGAAAAGATGTTTATGGTTTTCATAGTTTCAGATGCTATATCTCTCTTTTCTTCCATAACTTCAGTGCTAATGTTTTTGGGAATTCTTACATCGCGTTATGCGGAAGATGATTTCCTCAAATCCTTACCCACAAAGATGATAATAGGCCTTTCAACACTCCTGATCTCCATCGCTACCATGATGGTTGCCTTTTGTTCTGCCCTTTTCCTTATGCTTCATGAAAGATTACAGATTGTTATCCCAATCATTTTCCTCGCCAGCATTCCAGTCGCCTTATTTATTGGGATGCAATTTCCCCTTCTTGTTGAGATTTTCATTTCTACATACGGAGGAGGAATATTTGACAAGAAAGTGAAACGGTGGATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 DUF4219 PGG

Protein Analysis

513

Amino Acids

57.86

Weight (kDa)

7.19

Isoelectric Point (pI)

46.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000027)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18670 AT3G18670 AT3G54065
fragaria_vesca FvH4_1g26570 FvH4_1g26570 FvH4_5g19270 FvH4_5g19273 FvH4_5g35840 FvH4_5g36340 FvH4_5g36630 FvH4_5g37181 FvH4_5g37182 FvH4_5g37185 FvH4_5g37240 FvH4_5g37260 FvH4_6g21440 FvH4_6g44571 FvH4_6g44572 FvH4_6g44610 FvH4_6g44620 FvH4_6g44650 FvH4_6g44660 FvH4_6g45151 FvH4_6g45152 FvH4_6g45152 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45154 FvH4_6g51440 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090
malus_domestica MD00G1010300.v1.1 MD00G1010400.v1.1 MD00G1010500.v1.1 MD00G1011000.v1.1 MD00G1011200.v1.1 MD00G1011500.v1.1 MD00G1011900.v1.1 MD03G1133900.v1.1 MD03G1134100.v1.1 MD09G1086300.v1.1 MD09G1086500.v1.1 MD09G1086900.v1.1 MD09G1087000.v1.1 MD09G1088000.v1.1 MD09G1088100.v1.1 MD09G1088200.v1.1 MD09G1088300.v1.1 MD09G1089000.v1.1 MD09G1089300.v1.1 MD09G1133800.v1.1 MD16G1219400.v1.1 MD17G1027900.v1.1 MD17G1028400.v1.1 MD17G1028600.v1.1 MD17G1028700.v1.1 MD17G1028900.v1.1 MD17G1029000.v1.1 MD17G1029100.v1.1 MD17G1029200.v1.1 MD17G1075400.v1.1 MD17G1076000.v1.1 MD17G1077000.v1.1 MD17G1077100.v1.1 MD17G1077800.v1.1 MD17G1078000.v1.1 MD17G1078100.v1.1 MD17G1078300.v1.1 MD17G1100900.v1.1 MD17G1101100.v1.1 MD17G1101400.v1.1 MD17G1104200.v1.1 MD17G1104500.v1.1 MD17G1121300.v1.1 MD17G1121600.v1.1 MD17G1121900.v1.1 MD17G1122700.v1.1 MD17G1218800.v1.1
prunus_persica Prupe.2G033800_v2.0.a1 Prupe.2G033900_v2.0.a1 Prupe.2G080300_v2.0.a1 Prupe.2G080700_v2.0.a1 Prupe.2G080900_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G082000_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082200_v2.0.a1 Prupe.2G082300_v2.0.a1 Prupe.2G082700_v2.0.a1 Prupe.2G082800_v2.0.a1 Prupe.2G082900_v2.0.a1 Prupe.3G235600_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236800_v2.0.a1 Prupe.3G237000_v2.0.a1 Prupe.3G237100_v2.0.a1 Prupe.3G237300_v2.0.a1 Prupe.3G237400_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.4G282500_v2.0.a1 Prupe.4G282500_v2.0.a1
pyrus_communis pycom03g08990 pycom03g09000 pycom09g01180 pycom09g01190 pycom09g01220 pycom09g01230 pycom09g01360 pycom09g01370 pycom09g01380 pycom09g01410 pycom09g05500 pycom11g10280 pycom11g10290 pycom11g10310 pycom16g18270 pycom16g18280 pycom17g02280 pycom17g02290 pycom17g02300 pycom17g02360 pycom17g02390 pycom17g02410 pycom17g02440 pycom17g02460 pycom17g02470 pycom17g02480 pycom17g02510 pycom17g02530 pycom17g02540 pycom17g02550 pycom17g02560 pycom17g02570 pycom17g02580 pycom17g02630 pycom17g02640 pycom17g04970 pycom17g04980 pycom17g05010 pycom17g07090 pycom17g07620 pycom17g07630 pycom17g07640 pycom17g07650 pycom17g07660 pycom17g07740 pycom17g07760 pycom17g07770 pycom17g09580 pycom17g11170 pycom17g11200 pycom17g11220 pycom17g11240 pycom17g11250 pycom17g11300 pycom17g11340 pycom17g11380 pycom17g11440
rosa_chinensis RchiOBHm_Chr1g0332901 RchiOBHm_Chr1g0338981 RchiOBHm_Chr1g0338991 RchiOBHm_Chr1g0341201 RchiOBHm_Chr1g0341211 RchiOBHm_Chr1g0342721 RchiOBHm_Chr1g0343191 RchiOBHm_Chr2g0146761 RchiOBHm_Chr2g0161791 RchiOBHm_Chr2g0161801 RchiOBHm_Chr2g0161841 RchiOBHm_Chr2g0162041 RchiOBHm_Chr2g0162651 RchiOBHm_Chr2g0162691 RchiOBHm_Chr2g0162701 RchiOBHm_Chr2g0162711 RchiOBHm_Chr2g0162721 RchiOBHm_Chr2g0162811 RchiOBHm_Chr2g0162831 RchiOBHm_Chr2g0162841 RchiOBHm_Chr4g0416381 RchiOBHm_Chr4g0416391 RchiOBHm_Chr5g0075981 RchiOBHm_Chr6g0276101 RchiOBHm_Chr7g0214581 RchiOBHm_Chr7g0214631 RchiOBHm_Chr7g0214651 RchiOBHm_Chr7g0214721 RchiOBHm_Chr7g0223161 RchiOBHm_Chr7g0230661 RchiOBHm_Chr7g0230751 RchiOBHm_Chr7g0230781 RchiOBHm_Chr7g0234581 RchiOBHm_Chr7g0234601 RchiOBHm_Chr7g0237561 RchiOBHm_Chr7g0237571 RchiOBHm_Chr7g0238781 RchiOBHm_Chr7g0238811 RchiOBHm_Chr7g0242161 RchiOBHm_Chr7g0242401 RchiOBHm_Chr7g0242451 RchiOBHm_Chr7g0242921 RchiOBHm_Chr7g0242981 RchiOBHm_Chr7g0243111 RchiOBHm_Chr7g0243251 RchiOBHm_Chr7g0243331
rosa_laevigata RLG00000000803 RLG00000000807 RLG00000000809 RLG00000000811 RLG00000000814 RLG00000000854 RLG00000000859 RLG00000000864 RLG00000000994 RLG00000000995 RLG00000001458 RLG00000001461 RLG00000001474 RLG00000001476 RLG00000002729 RLG00000002730 RLG00000003505 RLG00000008871 RLG00000008873 RLG00000018513 RLG00000021300 RLG00000021303 RLG00000021318 RLG00000021356 RLG00000021357 RLG00000029070 RLG00000029071 RLG00000029171 RLG00000029189 RLG00000029190 RLG00000029640 RLG00000034635
rosa_multiflora Rmu_co8149086.1_g000001 Rmu_co8460577.1_g000001 Rmu_sc0000429.1_g000062 Rmu_sc0000429.1_g000071 Rmu_sc0000429.1_g000081 Rmu_sc0000863.1_g000020 Rmu_sc0001488.1_g000011 Rmu_sc0001545.1_g000007 Rmu_sc0001849.1_g000068 Rmu_sc0001993.1_g000003 Rmu_sc0002222.1_g000002 Rmu_sc0002308.1_g000053 Rmu_sc0002308.1_g000069 Rmu_sc0002480.1_g000007 Rmu_sc0003179.1_g000041 Rmu_sc0004213.1_g000011 Rmu_sc0007101.1_g000012 Rmu_sc0008565.1_g000011 Rmu_sc0009298.1_g000003 Rmu_sc0010407.1_g000009 Rmu_sc0010407.1_g000013 Rmu_sc0026966.1_g000004 Rmu_ssc0000152.1_g000012 Rmu_ssc0000152.1_g000014 Rmu_ssc0000295.1_g000021 Rmu_ssc0000295.1_g000026
rosa_roxburghii Rroxscaffold_1G00029600 Rroxscaffold_2G00087790 Rroxscaffold_2G00087800 Rroxscaffold_2G00088360 Rroxscaffold_2G00088500 Rroxscaffold_2G00088530 Rroxscaffold_2G00088590 Rroxscaffold_3G00221570 Rroxscaffold_3G00222190 Rroxscaffold_3G00222240 Rroxscaffold_3G00222880 Rroxscaffold_3G00222900 Rroxscaffold_3G00223990 Rroxscaffold_3G00229750 Rroxscaffold_3G00229760 Rroxscaffold_3G00245140 Rroxscaffold_3G00245150 Rroxscaffold_3G00245200 Rroxscaffold_3G00253520 Rroxscaffold_3G00253530 Rroxscaffold_4G00294500 Rroxscaffold_4G00311800 Rroxscaffold_4G00311830 Rroxscaffold_4G00311850 Rroxscaffold_4G00313180 Rroxscaffold_4G00313210 Rroxscaffold_4G00316270 Rroxscaffold_4G00317910 Rroxscaffold_4G00317920 Rroxscaffold_5G00349290 Rroxscaffold_5G00349300 Rroxscaffold_5G00349310 Rroxscaffold_5G00351950 Rroxscaffold_5G00351960 Rroxscaffold_5G00353390 Rroxscaffold_7G00192540
rosa_rugosa Rorug01G0102500 Rorug01G0102600 Rorug01G0146400.1 Rorug01G0146500.1 Rorug01G0159400.1 Rorug01G0159500.1 Rorug02G0491900 Rorug02G0492000 Rorug02G0492100 Rorug02G0492200 Rorug02G0492300 Rorug02G0492400 Rorug02G0492500 Rorug02G0492700 Rorug02G0498500 Rorug02G0498600 Rorug02G0498800 Rorug04G0006900 Rorug04G0053700 Rorug06G0002000 Rorug06G0002100 Rorug07G0304700 Rorug07G0304800 Rorug07G0304800 Rorug07G0304800 Rorug07G0305300 Rorug07G0305400 Rorug07G0305500 Rorug07G0305500 Rorug07G0318300 Rorug07G0318600 Rorug07G0323600
rosa_samantha Rh1AG128900 Rh1AG162500 Rh1AG163000 Rh1AG164000 Rh1AG164700 Rh1AG173200 Rh1AG173300 Rh1AG173800 Rh1BG098100 Rh1BG129800 Rh1BG130600 Rh1BG141300 Rh1BG141500 Rh1BG141600 Rh1CG122700 Rh1CG151900 Rh1CG152400 Rh1CG153100 Rh1CG153500 Rh1CG161400 Rh1CG161600 Rh1DG134200 Rh1DG173500 Rh1DG173700 Rh2AG558100 Rh2AG558500 Rh2AG560200 Rh2AG564700 Rh2AG564800 Rh2BG465600 Rh2BG571700 Rh2BG572000 Rh2BG573500 Rh2CG439800 Rh2CG541800 Rh2CG542100 Rh2CG542200 Rh2CG543800 Rh2CG547300 Rh2DG474700 Rh2DG580600 Rh2DG580900 Rh2DG581200 Rh2DG581700 Rh2DG581800 Rh2DG583500 Rh2DG587200 Rh2DG587300 Rh2DG587400 Rh4AG128900 Rh4AG203800 Rh4AG319900 Rh4AG320000 Rh4BG122200 Rh4BG201100 Rh4CG136000 Rh4DG122400 Rh4DG201100 Rh4DG323600 Rh6BG077000 Rh6DG206200 Rh7AG282300 Rh7AG282500 Rh7AG283400 Rh7AG358600 Rh7AG414500 Rh7AG415200 Rh7AG415500 Rh7AG461700 Rh7AG469300 Rh7AG477800 Rh7BG273900 Rh7BG274000 Rh7BG390400 Rh7BG390500 Rh7BG391500 Rh7BG391800 Rh7BG408300 Rh7BG432000 Rh7BG439200 Rh7BG449200 Rh7BG449900 Rh7BG450400 Rh7BG450500 Rh7CG220900 Rh7CG301600 Rh7CG302700 Rh7CG377000 Rh7CG433900 Rh7CG434200 Rh7CG478800 Rh7DG286200 Rh7DG354000 Rh7DG424600 Rh7DG448000 Rh7DG462800 Rh7DG462900
rosa_wichuraiana Rw0G003440 Rw0G011970 Rw0G017120 Rw0G017130 Rw0G017140 Rw0G018470 Rw0G018480 Rw0G020440 Rw1G010470 Rw2G046180 Rw2G046210 Rw2G046230 Rw2G046390 Rw2G046400 Rw2G046710 Rw2G046720 Rw2G046730 Rw3G025310 Rw4G010410 Rw4G017250 Rw6G018270 Rw7G018180 Rw7G024130 Rw7G024160 Rw7G024170 Rw7G034060 Rw7G034250 Rw7G034260 Rw7G034400 Rw7G034410 Rw7G038210 Rw7G039020 Rw7G039060 Rw7G039280 Rw7G039400 Rw7G039470 Rw7G039880 Rw7G039890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 572
AccI GTMKAC 1 cut(s) 361
AccII CGCG 1 cut(s) 1264
AccIII TCCGGA 1 cut(s) 685
AciI CCGC 2 cut(s) 572, 1271
AclWI GGATC 4 cut(s) 356, 506, 520, 677
AcoI YGGCCR 1 cut(s) 246
AcsI RAATTY 2 cut(s) 332, 1251
AcuI CTGAAG 2 cut(s) 212, 1215
AfaI GTAC 2 cut(s) 940, 1072
AfeI AGCGCT 1 cut(s) 233
AfiI CCNNNNNNNGG 3 cut(s) 155, 244, 598
AflIII ACRYGT 1 cut(s) 558
AgsI TTSAA 8 cut(s) 407, 422, 711, 738, 925, 973, 1027, 1323
AjnI CCWGG 2 cut(s) 750, 1126
AleI CACNNNNGTG 1 cut(s) 510
AloI GAACNNNNNNTCC 2 cut(s) 1138, 1170
AluBI AGCT 2 cut(s) 635, 968
AluI AGCT 2 cut(s) 635, 968
Alw21I GWGCWC 1 cut(s) 1087
Alw26I GTCTC 1 cut(s) 982
AlwI GGATC 4 cut(s) 356, 506, 520, 677
AlwNI CAGNNNCTG 1 cut(s) 1127
Ama87I CYCGRG 2 cut(s) 313, 955
Aor13HI TCCGGA 1 cut(s) 685
Aor51HI AGCGCT 1 cut(s) 233
AoxI GGCC 5 cut(s) 157, 246, 259, 607, 1315
ApaI GGGCCC 1 cut(s) 161
ApeKI GCWGC 7 cut(s) 83, 234, 325, 890, 1058, 1109, 1112
ApoI RAATTY 2 cut(s) 332, 1251
Asp700I GAANNNNTTC 1 cut(s) 706
AspLEI GCGC 2 cut(s) 170, 234
AspS9I GGNCC 4 cut(s) 157, 158, 260, 553
AvaI CYCGRG 2 cut(s) 313, 955
AvaII GGWCC 1 cut(s) 553
BaeGI GKGCMC 1 cut(s) 161
BalI TGGCCA 1 cut(s) 248
BanII GRGCYC 1 cut(s) 161
BbsI GAAGAC 1 cut(s) 144
Bbv12I GWGCWC 1 cut(s) 1087
BbvI GCAGC 7 cut(s) 70, 221, 312, 902, 1070, 1096, 1124
BccI CCATC 4 cut(s) 599, 1106, 1345, 1346
BcgI CGANNNNNNTGC 2 cut(s) 1420, 1454
BciT130I CCWGG 2 cut(s) 752, 1128
BciVI GTATCC 1 cut(s) 132
BcoDI GTCTC 1 cut(s) 982
BfmI CTRYAG 2 cut(s) 942, 1110
BfoI RGCGCY 2 cut(s) 171, 235
BfuI GTATCC 1 cut(s) 132
BglI GCCNNNNNGGC 2 cut(s) 165, 267
BisI GCNGC 7 cut(s) 84, 235, 326, 891, 1059, 1110, 1113
BlsI GCNGC 7 cut(s) 85, 236, 327, 892, 1060, 1111, 1114
BmcAI AGTACT 1 cut(s) 940
Bme1390I CCNGG 2 cut(s) 752, 1128
Bme18I GGWCC 1 cut(s) 553
BmeT110I CYCGRG 2 cut(s) 313, 955
BmgT120I GGNCC 4 cut(s) 157, 158, 260, 553
BmiI GGNNCC 1 cut(s) 159
BmrFI CCNGG 2 cut(s) 752, 1128
BmrI ACTGGG 1 cut(s) 434
BmsI GCATC 5 cut(s) 805, 840, 1045, 1192, 1446
BmuI ACTGGG 1 cut(s) 434
BpiI GAAGAC 1 cut(s) 144
BsaBI GATNNNNATC 2 cut(s) 1337, 1406
BsaI GGTCTC 1 cut(s) 982
BsaJI CCNNGG 3 cut(s) 58, 216, 954
BsaWI WCCGGW 1 cut(s) 685
Bsc4I CCNNNNNNNGG 3 cut(s) 155, 244, 598
Bse1I ACTGG 2 cut(s) 429, 1436
Bse8I GATNNNNATC 2 cut(s) 1337, 1406
BseAI TCCGGA 1 cut(s) 685
BseBI CCWGG 2 cut(s) 752, 1128
BseDI CCNNGG 3 cut(s) 58, 216, 954
BseGI GGATG 4 cut(s) 694, 855, 1053, 1461
BseJI GATNNNNATC 2 cut(s) 1337, 1406
BseLI CCNNNNNNNGG 3 cut(s) 155, 244, 598
BseMII CTCAG 1 cut(s) 465
BseNI ACTGG 2 cut(s) 429, 1436
BseRI GAGGAG 1 cut(s) 1515
BseSI GKGCMC 1 cut(s) 161
BseXI GCAGC 7 cut(s) 70, 221, 312, 902, 1070, 1096, 1124
BsgI GTGCAG 1 cut(s) 909
Bsh1236I CGCG 1 cut(s) 1264
Bsh1285I CGRYCG 1 cut(s) 135
BshFI GGCC 5 cut(s) 159, 248, 261, 609, 1317
BsiEI CGRYCG 1 cut(s) 135
BsiHKAI GWGCWC 1 cut(s) 1087
BsiHKCI CYCGRG 2 cut(s) 313, 955
BsiSI CCGG 1 cut(s) 686
BslFI GGGAC 2 cut(s) 40, 334
BslI CCNNNNNNNGG 3 cut(s) 155, 244, 598
BsmAI GTCTC 1 cut(s) 982
BsmFI GGGAC 2 cut(s) 40, 334
BsmI GAATGC 1 cut(s) 1431
BsnI GGCC 5 cut(s) 159, 248, 261, 609, 1317
Bso31I GGTCTC 1 cut(s) 982
BsoBI CYCGRG 2 cut(s) 313, 955
Bsp120I GGGCCC 1 cut(s) 157
Bsp1286I GDGCHC 2 cut(s) 161, 1087
Bsp13I TCCGGA 1 cut(s) 685
Bsp1407I TGTACA 1 cut(s) 1070
Bsp143I GATC 8 cut(s) 132, 348, 498, 525, 532, 682, 874, 1332
BspACI CCGC 2 cut(s) 572, 1271
BspANI GGCC 5 cut(s) 159, 248, 261, 609, 1317
BspCNI CTCAG 1 cut(s) 464
BspEI TCCGGA 1 cut(s) 685
BspFNI CGCG 1 cut(s) 1264
BspHI TCATGA 1 cut(s) 1387
BspLI GGNNCC 1 cut(s) 159
BspMAI CTGCAG 1 cut(s) 1114
BspPI GGATC 4 cut(s) 356, 506, 520, 677
BspTNI GGTCTC 1 cut(s) 982
BsrBI CCGCTC 1 cut(s) 572
BsrGI TGTACA 1 cut(s) 1070
BsrI ACTGG 2 cut(s) 429, 1436
BssECI CCNNGG 3 cut(s) 58, 216, 954
BssMI GATC 8 cut(s) 132, 348, 498, 525, 532, 682, 874, 1332
BssNAI GTATAC 1 cut(s) 362
BssT1I CCWWGG 1 cut(s) 216
Bst1107I GTATAC 1 cut(s) 362
Bst2UI CCWGG 2 cut(s) 752, 1128
Bst4CI ACNGT 7 cut(s) 62, 345, 359, 943, 1075, 1123, 1530
Bst6I CTCTTC 3 cut(s) 45, 83, 637
BstAUI TGTACA 1 cut(s) 1070
BstC8I GCNNGC 2 cut(s) 539, 1429
BstDEI CTNAG 1 cut(s) 451
BstDSI CCRYGG 1 cut(s) 58
BstF5I GGATG 4 cut(s) 694, 855, 1053, 1461
BstFNI CGCG 1 cut(s) 1264
BstH2I RGCGCY 2 cut(s) 171, 235
BstHHI GCGC 2 cut(s) 170, 234
BstKTI GATC 8 cut(s) 135, 351, 501, 528, 535, 685, 877, 1335
BstMAI GTCTC 1 cut(s) 982
BstMBI GATC 8 cut(s) 132, 348, 498, 525, 532, 682, 874, 1332
BstMCI CGRYCG 1 cut(s) 135
BstMWI GCNNNNNNNGC 2 cut(s) 165, 267
BstNI CCWGG 2 cut(s) 752, 1128
BstNSI RCATGY 1 cut(s) 562
BstSCI CCNGG 2 cut(s) 750, 1126
BstSFI CTRYAG 2 cut(s) 942, 1110
BstSLI GKGCMC 1 cut(s) 161
BstUI CGCG 1 cut(s) 1264
BstV1I GCAGC 7 cut(s) 70, 221, 312, 902, 1070, 1096, 1124
BstV2I GAAGAC 1 cut(s) 144
BstX2I RGATCY 2 cut(s) 348, 682
BstYI RGATCY 2 cut(s) 348, 682
BstZ17I GTATAC 1 cut(s) 362
BsuI GTATCC 1 cut(s) 132
BsuRI GGCC 5 cut(s) 159, 248, 261, 609, 1317
BtgI CCRYGG 1 cut(s) 58
BtgZI GCGATG 2 cut(s) 1245, 1324
BtsCI GGATG 4 cut(s) 694, 855, 1053, 1461
BtsIMutI CAGTG 1 cut(s) 1239
Cac8I GCNNGC 2 cut(s) 539, 1429
CaiI CAGNNNCTG 1 cut(s) 1127
CciI TCATGA 1 cut(s) 1387
CfoI GCGC 2 cut(s) 170, 234
Cfr13I GGNCC 4 cut(s) 157, 158, 260, 553
CseI GACGC 1 cut(s) 331
Csp6I GTAC 2 cut(s) 939, 1071
CviAII CATG 8 cut(s) 13, 530, 559, 995, 1102, 1169, 1348, 1388
CviQI GTAC 2 cut(s) 939, 1071
DdeI CTNAG 1 cut(s) 451
DpnI GATC 8 cut(s) 134, 350, 500, 527, 534, 684, 876, 1334
DpnII GATC 8 cut(s) 132, 348, 498, 525, 532, 682, 874, 1332
EaeI YGGCCR 1 cut(s) 246
Eam1104I CTCTTC 3 cut(s) 45, 83, 637
EarI CTCTTC 3 cut(s) 45, 83, 637
Eco130I CCWWGG 1 cut(s) 216
Eco147I AGGCCT 1 cut(s) 1317
Eco24I GRGCYC 1 cut(s) 161
Eco31I GGTCTC 1 cut(s) 982
Eco32I GATATC 1 cut(s) 589
Eco47I GGWCC 1 cut(s) 553
Eco47III AGCGCT 1 cut(s) 233
Eco57I CTGAAG 2 cut(s) 212, 1215
Eco88I CYCGRG 2 cut(s) 313, 955
EcoO109I RGGNCCY 2 cut(s) 157, 158
EcoRI GAATTC 1 cut(s) 1251
EcoRII CCWGG 2 cut(s) 750, 1126
EcoRV GATATC 1 cut(s) 589
EcoT14I CCWWGG 1 cut(s) 216
EcoT38I GRGCYC 1 cut(s) 161
ErhI CCWWGG 1 cut(s) 216
FaeI CATG 8 cut(s) 16, 533, 562, 998, 1105, 1172, 1351, 1391
FalI AAGNNNNNCTT 2 cut(s) 594, 626
FaqI GGGAC 2 cut(s) 40, 334
FatI CATG 8 cut(s) 12, 529, 558, 994, 1101, 1168, 1347, 1387
FauNDI CATATG 1 cut(s) 509
FblI GTMKAC 1 cut(s) 361
Fnu4HI GCNGC 7 cut(s) 84, 235, 326, 891, 1059, 1110, 1113
FokI GGATG 4 cut(s) 701, 862, 1060, 1468
FriOI GRGCYC 1 cut(s) 161
Fsp4HI GCNGC 7 cut(s) 84, 235, 326, 891, 1059, 1110, 1113
GlaI GCGC 2 cut(s) 169, 233
GluI GCNGC 7 cut(s) 84, 235, 326, 891, 1059, 1110, 1113
HaeII RGCGCY 2 cut(s) 171, 235
HaeIII GGCC 5 cut(s) 159, 248, 261, 609, 1317
HapII CCGG 1 cut(s) 686
HgaI GACGC 1 cut(s) 331
HhaI GCGC 2 cut(s) 170, 234
Hin1II CATG 8 cut(s) 16, 533, 562, 998, 1105, 1172, 1351, 1391
Hin6I GCGC 2 cut(s) 168, 232
HinP1I GCGC 2 cut(s) 168, 232
HinfI GANTC 3 cut(s) 31, 53, 272
HpaII CCGG 1 cut(s) 686
Hpy166II GTNNAC 1 cut(s) 362
Hpy188I TCNGA 4 cut(s) 66, 641, 814, 1201
Hpy188III TCNNGA 7 cut(s) 130, 313, 413, 686, 957, 1330, 1388
Hpy8I GTNNAC 1 cut(s) 362
Hpy99I CGWCG 1 cut(s) 268
HpyAV CCTTC 7 cut(s) 148, 312, 711, 1021, 1028, 1126, 1478
HpyCH4III ACNGT 7 cut(s) 62, 345, 359, 943, 1075, 1123, 1530
HpyF10VI GCNNNNNNNGC 2 cut(s) 165, 267
HpyF3I CTNAG 1 cut(s) 451
Hsp92II CATG 8 cut(s) 16, 533, 562, 998, 1105, 1172, 1351, 1391
HspAI GCGC 2 cut(s) 168, 232
Kpn2I TCCGGA 1 cut(s) 685
Kzo9I GATC 8 cut(s) 132, 348, 498, 525, 532, 682, 874, 1332
Lsp1109I GCAGC 7 cut(s) 70, 221, 312, 902, 1070, 1096, 1124
LweI GCATC 5 cut(s) 805, 840, 1045, 1192, 1446
MalI GATC 8 cut(s) 134, 350, 500, 527, 534, 684, 876, 1334
MbiI CCGCTC 1 cut(s) 572
MboI GATC 8 cut(s) 132, 348, 498, 525, 532, 682, 874, 1332
MboII GAAGA 9 cut(s) 62, 70, 149, 465, 614, 654, 1043, 1212, 1286
MfeI CAATTG 1 cut(s) 738
MflI RGATCY 2 cut(s) 348, 682
MhlI GDGCHC 2 cut(s) 161, 1087
MlsI TGGCCA 1 cut(s) 248
MluNI TGGCCA 1 cut(s) 248
MlyI GAGTC 1 cut(s) 62
MmeI TCCRAC 1 cut(s) 884
Mox20I TGGCCA 1 cut(s) 248
MroI TCCGGA 1 cut(s) 685
MroXI GAANNNNTTC 1 cut(s) 706
MscI TGGCCA 1 cut(s) 248
MseI TTAA 1 cut(s) 933
MslI CAYNNNNRTG 2 cut(s) 510, 1304
Msp20I TGGCCA 1 cut(s) 248
MspI CCGG 1 cut(s) 686
MspR9I CCNGG 2 cut(s) 752, 1128
MunI CAATTG 1 cut(s) 738
Mva1269I GAATGC 1 cut(s) 1431
MvaI CCWGG 2 cut(s) 752, 1128
MvnI CGCG 1 cut(s) 1264
MwoI GCNNNNNNNGC 2 cut(s) 165, 267
NdeI CATATG 1 cut(s) 509
NdeII GATC 8 cut(s) 132, 348, 498, 525, 532, 682, 874, 1332
NlaIII CATG 8 cut(s) 16, 533, 562, 998, 1105, 1172, 1351, 1391
NlaIV GGNNCC 1 cut(s) 159
NspI RCATGY 1 cut(s) 562
OliI CACNNNNGTG 1 cut(s) 510
PagI TCATGA 1 cut(s) 1387
PceI AGGCCT 1 cut(s) 1317
PciI ACATGT 1 cut(s) 558
PctI GAATGC 1 cut(s) 1431
PdmI GAANNNNTTC 1 cut(s) 706
PfeI GAWTC 2 cut(s) 31, 272
PkrI GCNGC 7 cut(s) 85, 236, 327, 892, 1060, 1111, 1114
Ple19I CGATCG 1 cut(s) 135
PleI GAGTC 1 cut(s) 61
PpsI GAGTC 1 cut(s) 61
PscI ACATGT 1 cut(s) 558
Psp6I CCWGG 2 cut(s) 750, 1126
PspGI CCWGG 2 cut(s) 750, 1126
PspN4I GGNNCC 1 cut(s) 159
PspOMI GGGCCC 1 cut(s) 157
PspPI GGNCC 4 cut(s) 157, 158, 260, 553
PstI CTGCAG 1 cut(s) 1114
PstNI CAGNNNCTG 1 cut(s) 1127
PsuI RGATCY 2 cut(s) 348, 682
PvuI CGATCG 1 cut(s) 135
RsaI GTAC 2 cut(s) 940, 1072
RsaNI GTAC 2 cut(s) 939, 1071
RseI CAYNNNNRTG 2 cut(s) 510, 1304
SaqAI TTAA 1 cut(s) 933
SatI GCNGC 7 cut(s) 84, 235, 326, 891, 1059, 1110, 1113
Sau3AI GATC 8 cut(s) 132, 348, 498, 525, 532, 682, 874, 1332
Sau96I GGNCC 4 cut(s) 157, 158, 260, 553
ScaI AGTACT 1 cut(s) 940
SchI GAGTC 1 cut(s) 62
ScrFI CCNGG 2 cut(s) 752, 1128
SduI GDGCHC 2 cut(s) 161, 1087
SetI ASST 8 cut(s) 144, 457, 492, 637, 889, 933, 970, 1084
SfaNI GCATC 5 cut(s) 805, 840, 1045, 1192, 1446
SfcI CTRYAG 2 cut(s) 942, 1110
SinI GGWCC 1 cut(s) 553
SmiMI CAYNNNNRTG 2 cut(s) 510, 1304
SseBI AGGCCT 1 cut(s) 1317
SsiI CCGC 2 cut(s) 572, 1271
SspI AATATT 1 cut(s) 1509
StuI AGGCCT 1 cut(s) 1317
StyD4I CCNGG 2 cut(s) 750, 1126
StyI CCWWGG 1 cut(s) 216
TaaI ACNGT 7 cut(s) 62, 345, 359, 943, 1075, 1123, 1530
TaqI TCGA 2 cut(s) 48, 135
TatI WGTACW 2 cut(s) 938, 1070
TfiI GAWTC 2 cut(s) 31, 272
Tru1I TTAA 1 cut(s) 933
Tru9I TTAA 1 cut(s) 933
TscAI CASTG 1 cut(s) 1239
TseI GCWGC 7 cut(s) 83, 234, 325, 890, 1058, 1109, 1112
TspGWI ACGGA 2 cut(s) 878, 1512
TspRI CASTG 1 cut(s) 1239
VpaK11BI GGWCC 1 cut(s) 553
XapI RAATTY 2 cut(s) 332, 1251
XceI RCATGY 1 cut(s) 562
XmiI GTMKAC 1 cut(s) 361
XmnI GAANNNNTTC 1 cut(s) 706
ZrmI AGTACT 1 cut(s) 940
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.