protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 5 |
| AclWI | GGATC | 1 cut(s) | 218 |
| AcoI | YGGCCR | 1 cut(s) | 105 |
| AcsI | RAATTY | 2 cut(s) | 62, 194 |
| AfaI | GTAC | 2 cut(s) | 123, 301 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 103 |
| AflII | CTTAAG | 1 cut(s) | 175 |
| AgsI | TTSAA | 4 cut(s) | 90, 116, 279, 394 |
| AluBI | AGCT | 2 cut(s) | 236, 332 |
| AluI | AGCT | 2 cut(s) | 236, 332 |
| Alw26I | GTCTC | 2 cut(s) | 159, 325 |
| AlwI | GGATC | 1 cut(s) | 218 |
| AoxI | GGCC | 1 cut(s) | 105 |
| ApeKI | GCWGC | 1 cut(s) | 332 |
| ApoI | RAATTY | 2 cut(s) | 62, 194 |
| BalI | TGGCCA | 1 cut(s) | 107 |
| BbvI | GCAGC | 1 cut(s) | 319 |
| BccI | CCATC | 4 cut(s) | 287, 320, 344, 355 |
| BceAI | ACGGC | 2 cut(s) | 35, 399 |
| BcoDI | GTCTC | 2 cut(s) | 159, 325 |
| BfrI | CTTAAG | 1 cut(s) | 175 |
| BisI | GCNGC | 2 cut(s) | 5, 333 |
| BlsI | GCNGC | 2 cut(s) | 6, 334 |
| BmsI | GCATC | 1 cut(s) | 399 |
| BsaJI | CCNNGG | 3 cut(s) | 74, 98, 108 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 103 |
| BseDI | CCNNGG | 3 cut(s) | 74, 98, 108 |
| BseGI | GGATG | 1 cut(s) | 316 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 103 |
| BseMII | CTCAG | 2 cut(s) | 336, 348 |
| BseRI | GAGGAG | 1 cut(s) | 390 |
| BseXI | GCAGC | 1 cut(s) | 319 |
| BseYI | CCCAGC | 1 cut(s) | 335 |
| BshFI | GGCC | 1 cut(s) | 107 |
| BslFI | GGGAC | 1 cut(s) | 92 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 103 |
| BsmAI | GTCTC | 2 cut(s) | 159, 325 |
| BsmFI | GGGAC | 1 cut(s) | 92 |
| BsmI | GAATGC | 2 cut(s) | 170, 189 |
| BsnI | GGCC | 1 cut(s) | 107 |
| Bsp1407I | TGTACA | 1 cut(s) | 121 |
| Bsp143I | GATC | 2 cut(s) | 141, 210 |
| BspACI | CCGC | 1 cut(s) | 5 |
| BspANI | GGCC | 1 cut(s) | 107 |
| BspCNI | CTCAG | 2 cut(s) | 335, 349 |
| BspHI | TCATGA | 2 cut(s) | 256, 405 |
| BspPI | GGATC | 1 cut(s) | 218 |
| BspTI | CTTAAG | 1 cut(s) | 175 |
| BsrGI | TGTACA | 1 cut(s) | 121 |
| BssECI | CCNNGG | 3 cut(s) | 74, 98, 108 |
| BssMI | GATC | 2 cut(s) | 141, 210 |
| BssT1I | CCWWGG | 1 cut(s) | 98 |
| Bst4CI | ACNGT | 2 cut(s) | 112, 121 |
| BstAFI | CTTAAG | 1 cut(s) | 175 |
| BstAUI | TGTACA | 1 cut(s) | 121 |
| BstC8I | GCNNGC | 1 cut(s) | 414 |
| BstDEI | CTNAG | 2 cut(s) | 322, 357 |
| BstDSI | CCRYGG | 2 cut(s) | 74, 108 |
| BstF5I | GGATG | 1 cut(s) | 316 |
| BstKTI | GATC | 2 cut(s) | 144, 213 |
| BstMAI | GTCTC | 2 cut(s) | 159, 325 |
| BstMBI | GATC | 2 cut(s) | 141, 210 |
| BstV1I | GCAGC | 1 cut(s) | 319 |
| BstX2I | RGATCY | 1 cut(s) | 210 |
| BstYI | RGATCY | 1 cut(s) | 210 |
| BsuRI | GGCC | 1 cut(s) | 107 |
| BtgI | CCRYGG | 2 cut(s) | 74, 108 |
| BtsCI | GGATG | 1 cut(s) | 316 |
| Cac8I | GCNNGC | 1 cut(s) | 414 |
| CciI | TCATGA | 2 cut(s) | 256, 405 |
| Csp6I | GTAC | 2 cut(s) | 122, 300 |
| CviAII | CATG | 3 cut(s) | 125, 257, 406 |
| CviJI | RGCY | 5 cut(s) | 107, 236, 332, 386, 416 |
| CviKI_1 | RGCY | 5 cut(s) | 107, 236, 332, 386, 416 |
| CviQI | GTAC | 2 cut(s) | 122, 300 |
| DdeI | CTNAG | 2 cut(s) | 322, 357 |
| DpnI | GATC | 2 cut(s) | 143, 212 |
| DpnII | GATC | 2 cut(s) | 141, 210 |
| EaeI | YGGCCR | 1 cut(s) | 105 |
| Eco130I | CCWWGG | 1 cut(s) | 98 |
| EcoT14I | CCWWGG | 1 cut(s) | 98 |
| ErhI | CCWWGG | 1 cut(s) | 98 |
| FaeI | CATG | 3 cut(s) | 128, 260, 409 |
| FaiI | YATR | 8 cut(s) | 126, 161, 216, 224, 230, 258, 269, 407 |
| FaqI | GGGAC | 1 cut(s) | 92 |
| FatI | CATG | 3 cut(s) | 124, 256, 405 |
| Fnu4HI | GCNGC | 2 cut(s) | 5, 333 |
| FokI | GGATG | 1 cut(s) | 323 |
| Fsp4HI | GCNGC | 2 cut(s) | 5, 333 |
| GluI | GCNGC | 2 cut(s) | 5, 333 |
| GsaI | CCCAGC | 1 cut(s) | 339 |
| HaeIII | GGCC | 1 cut(s) | 107 |
| Hin1II | CATG | 3 cut(s) | 128, 260, 409 |
| HinfI | GANTC | 1 cut(s) | 394 |
| Hpy188I | TCNGA | 3 cut(s) | 141, 325, 358 |
| Hpy188III | TCNNGA | 2 cut(s) | 257, 406 |
| HpyAV | CCTTC | 1 cut(s) | 52 |
| HpyCH4III | ACNGT | 2 cut(s) | 112, 121 |
| HpyCH4V | TGCA | 4 cut(s) | 163, 170, 187, 412 |
| HpyF3I | CTNAG | 2 cut(s) | 322, 357 |
| Hsp92II | CATG | 3 cut(s) | 128, 260, 409 |
| Kzo9I | GATC | 2 cut(s) | 141, 210 |
| LmnI | GCTCC | 3 cut(s) | 53, 241, 329 |
| LpnPI | CCDG | 4 cut(s) | 285, 321, 372, 398 |
| Lsp1109I | GCAGC | 1 cut(s) | 319 |
| LweI | GCATC | 1 cut(s) | 399 |
| MalI | GATC | 2 cut(s) | 143, 212 |
| MboI | GATC | 2 cut(s) | 141, 210 |
| MflI | RGATCY | 1 cut(s) | 210 |
| MlsI | TGGCCA | 1 cut(s) | 107 |
| MluCI | AATT | 4 cut(s) | 62, 91, 133, 194 |
| MluNI | TGGCCA | 1 cut(s) | 107 |
| MnlI | CCTC | 4 cut(s) | 122, 290, 408, 411 |
| Mox20I | TGGCCA | 1 cut(s) | 107 |
| MscI | TGGCCA | 1 cut(s) | 107 |
| MseI | TTAA | 2 cut(s) | 176, 345 |
| Msp20I | TGGCCA | 1 cut(s) | 107 |
| MspCI | CTTAAG | 1 cut(s) | 175 |
| Mva1269I | GAATGC | 2 cut(s) | 170, 189 |
| NdeII | GATC | 2 cut(s) | 141, 210 |
| NlaIII | CATG | 3 cut(s) | 128, 260, 409 |
| PagI | TCATGA | 2 cut(s) | 256, 405 |
| PctI | GAATGC | 2 cut(s) | 170, 189 |
| PfeI | GAWTC | 1 cut(s) | 394 |
| PkrI | GCNGC | 2 cut(s) | 6, 334 |
| PspFI | CCCAGC | 1 cut(s) | 335 |
| PsuI | RGATCY | 1 cut(s) | 210 |
| RsaI | GTAC | 2 cut(s) | 123, 301 |
| RsaNI | GTAC | 2 cut(s) | 122, 300 |
| SaqAI | TTAA | 2 cut(s) | 176, 345 |
| SatI | GCNGC | 2 cut(s) | 5, 333 |
| Sau3AI | GATC | 2 cut(s) | 141, 210 |
| SetI | ASST | 6 cut(s) | 28, 104, 238, 274, 301, 334 |
| SfaNI | GCATC | 1 cut(s) | 399 |
| SmlI | CTYRAG | 1 cut(s) | 175 |
| SmoI | CTYRAG | 1 cut(s) | 175 |
| Sse9I | AATT | 4 cut(s) | 62, 91, 133, 194 |
| SsiI | CCGC | 1 cut(s) | 5 |
| StyI | CCWWGG | 1 cut(s) | 98 |
| TaaI | ACNGT | 2 cut(s) | 112, 121 |
| TasI | AATT | 4 cut(s) | 62, 91, 133, 194 |
| TatI | WGTACW | 1 cut(s) | 121 |
| TauI | GCSGC | 1 cut(s) | 7 |
| TfiI | GAWTC | 1 cut(s) | 394 |
| Tru1I | TTAA | 2 cut(s) | 176, 345 |
| Tru9I | TTAA | 2 cut(s) | 176, 345 |
| TseI | GCWGC | 1 cut(s) | 332 |
| TspDTI | ATGAA | 3 cut(s) | 231, 245, 389 |
| TspGWI | ACGGA | 1 cut(s) | 63 |
| Vha464I | CTTAAG | 1 cut(s) | 175 |
| XapI | RAATTY | 2 cut(s) | 62, 194 |