protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 166 |
| AclWI | GGATC | 3 cut(s) | 4, 15, 158 |
| AcoI | YGGCCR | 1 cut(s) | 980 |
| AcuI | CTGAAG | 1 cut(s) | 663 |
| AfaI | GTAC | 2 cut(s) | 120, 553 |
| AgsI | TTSAA | 5 cut(s) | 192, 219, 406, 454, 508 |
| AjnI | CCWGG | 2 cut(s) | 231, 574 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 586, 618 |
| AluBI | AGCT | 2 cut(s) | 116, 449 |
| AluI | AGCT | 2 cut(s) | 116, 449 |
| Alw26I | GTCTC | 2 cut(s) | 463, 967 |
| AlwI | GGATC | 3 cut(s) | 4, 15, 158 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 575 |
| Ama87I | CYCGRG | 1 cut(s) | 436 |
| Aor13HI | TCCGGA | 1 cut(s) | 166 |
| AoxI | GGCC | 2 cut(s) | 763, 980 |
| ApeKI | GCWGC | 2 cut(s) | 101, 371 |
| AsuHPI | GGTGA | 3 cut(s) | 59, 424, 880 |
| AvaI | CYCGRG | 1 cut(s) | 436 |
| BalI | TGGCCA | 1 cut(s) | 982 |
| BbsI | GAAGAC | 1 cut(s) | 729 |
| BbvI | GCAGC | 2 cut(s) | 113, 383 |
| BccI | CCATC | 2 cut(s) | 793, 794 |
| BciT130I | CCWGG | 2 cut(s) | 233, 576 |
| BcoDI | GTCTC | 2 cut(s) | 463, 967 |
| BfaI | CTAG | 1 cut(s) | 65 |
| BisI | GCNGC | 2 cut(s) | 102, 372 |
| BlsI | GCNGC | 2 cut(s) | 103, 373 |
| Bme1390I | CCNGG | 2 cut(s) | 233, 576 |
| BmeT110I | CYCGRG | 1 cut(s) | 436 |
| BmrFI | CCNGG | 2 cut(s) | 233, 576 |
| BmsI | GCATC | 4 cut(s) | 286, 321, 640, 894 |
| BpiI | GAAGAC | 1 cut(s) | 729 |
| BpuEI | CTTGAG | 1 cut(s) | 57 |
| BsaBI | GATNNNNATC | 1 cut(s) | 785 |
| BsaI | GGTCTC | 1 cut(s) | 463 |
| BsaJI | CCNNGG | 1 cut(s) | 435 |
| BsaWI | WCCGGW | 1 cut(s) | 166 |
| Bse1I | ACTGG | 1 cut(s) | 884 |
| Bse8I | GATNNNNATC | 1 cut(s) | 785 |
| BseAI | TCCGGA | 1 cut(s) | 166 |
| BseBI | CCWGG | 2 cut(s) | 233, 576 |
| BseDI | CCNNGG | 1 cut(s) | 435 |
| BseGI | GGATG | 3 cut(s) | 336, 534, 909 |
| BseJI | GATNNNNATC | 1 cut(s) | 785 |
| BseNI | ACTGG | 1 cut(s) | 884 |
| BseRI | GAGGAG | 1 cut(s) | 963 |
| BseXI | GCAGC | 2 cut(s) | 113, 383 |
| BsgI | GTGCAG | 1 cut(s) | 390 |
| BshFI | GGCC | 2 cut(s) | 765, 982 |
| BsiHKCI | CYCGRG | 1 cut(s) | 436 |
| BsiSI | CCGG | 1 cut(s) | 167 |
| BsmAI | GTCTC | 2 cut(s) | 463, 967 |
| BsmBI | CGTCTC | 1 cut(s) | 967 |
| BsmI | GAATGC | 1 cut(s) | 879 |
| BsnI | GGCC | 2 cut(s) | 765, 982 |
| Bso31I | GGTCTC | 1 cut(s) | 463 |
| BsoBI | CYCGRG | 1 cut(s) | 436 |
| Bsp13I | TCCGGA | 1 cut(s) | 166 |
| Bsp143I | GATC | 5 cut(s) | 9, 20, 163, 355, 780 |
| BspANI | GGCC | 2 cut(s) | 765, 982 |
| BspEI | TCCGGA | 1 cut(s) | 166 |
| BspHI | TCATGA | 1 cut(s) | 795 |
| BspPI | GGATC | 3 cut(s) | 4, 15, 158 |
| BspTNI | GGTCTC | 1 cut(s) | 463 |
| BsrI | ACTGG | 1 cut(s) | 884 |
| BssECI | CCNNGG | 1 cut(s) | 435 |
| BssMI | GATC | 5 cut(s) | 9, 20, 163, 355, 780 |
| Bst2UI | CCWGG | 2 cut(s) | 233, 576 |
| Bst4CI | ACNGT | 3 cut(s) | 556, 571, 978 |
| Bst6I | CTCTTC | 1 cut(s) | 78 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 290 |
| BstC8I | GCNNGC | 1 cut(s) | 877 |
| BstDEI | CTNAG | 1 cut(s) | 613 |
| BstF5I | GGATG | 3 cut(s) | 336, 534, 909 |
| BstKTI | GATC | 5 cut(s) | 12, 23, 166, 358, 783 |
| BstMAI | GTCTC | 2 cut(s) | 463, 967 |
| BstMBI | GATC | 5 cut(s) | 9, 20, 163, 355, 780 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 290 |
| BstNI | CCWGG | 2 cut(s) | 233, 576 |
| BstSCI | CCNGG | 2 cut(s) | 231, 574 |
| BstV1I | GCAGC | 2 cut(s) | 113, 383 |
| BstV2I | GAAGAC | 1 cut(s) | 729 |
| BstX2I | RGATCY | 1 cut(s) | 163 |
| BstYI | RGATCY | 1 cut(s) | 163 |
| BsuRI | GGCC | 2 cut(s) | 765, 982 |
| BtgZI | GCGATG | 1 cut(s) | 772 |
| BtsCI | GGATG | 3 cut(s) | 336, 534, 909 |
| BtsIMutI | CAGTG | 1 cut(s) | 687 |
| Cac8I | GCNNGC | 1 cut(s) | 877 |
| CaiI | CAGNNNCTG | 1 cut(s) | 575 |
| CciI | TCATGA | 1 cut(s) | 795 |
| CseI | GACGC | 1 cut(s) | 192 |
| Csp6I | GTAC | 2 cut(s) | 119, 552 |
| CviAII | CATG | 5 cut(s) | 14, 43, 476, 796, 836 |
| CviJI | RGCY | 8 cut(s) | 116, 249, 374, 449, 563, 600, 765, 982 |
| CviKI_1 | RGCY | 8 cut(s) | 116, 249, 374, 449, 563, 600, 765, 982 |
| CviQI | GTAC | 2 cut(s) | 119, 552 |
| DdeI | CTNAG | 1 cut(s) | 613 |
| DpnI | GATC | 5 cut(s) | 11, 22, 165, 357, 782 |
| DpnII | GATC | 5 cut(s) | 9, 20, 163, 355, 780 |
| EaeI | YGGCCR | 1 cut(s) | 980 |
| Eam1104I | CTCTTC | 1 cut(s) | 78 |
| EarI | CTCTTC | 1 cut(s) | 78 |
| Eco31I | GGTCTC | 1 cut(s) | 463 |
| Eco57I | CTGAAG | 1 cut(s) | 663 |
| Eco88I | CYCGRG | 1 cut(s) | 436 |
| EcoRII | CCWGG | 2 cut(s) | 231, 574 |
| Esp3I | CGTCTC | 1 cut(s) | 967 |
| FaeI | CATG | 5 cut(s) | 17, 46, 479, 799, 839 |
| FatI | CATG | 5 cut(s) | 13, 42, 475, 795, 835 |
| FauNDI | CATATG | 1 cut(s) | 943 |
| Fnu4HI | GCNGC | 2 cut(s) | 102, 372 |
| FokI | GGATG | 3 cut(s) | 343, 541, 916 |
| Fsp4HI | GCNGC | 2 cut(s) | 102, 372 |
| FspBI | CTAG | 1 cut(s) | 65 |
| GluI | GCNGC | 2 cut(s) | 102, 372 |
| HaeIII | GGCC | 2 cut(s) | 765, 982 |
| HapII | CCGG | 1 cut(s) | 167 |
| HgaI | GACGC | 1 cut(s) | 192 |
| Hin1II | CATG | 5 cut(s) | 17, 46, 479, 799, 839 |
| HinfI | GANTC | 1 cut(s) | 699 |
| HpaII | CCGG | 1 cut(s) | 167 |
| HphI | GGTGA | 3 cut(s) | 59, 424, 880 |
| Hpy188I | TCNGA | 2 cut(s) | 113, 649 |
| Hpy188III | TCNNGA | 7 cut(s) | 74, 167, 303, 438, 711, 778, 796 |
| Hpy99I | CGWCG | 1 cut(s) | 186 |
| HpyAV | CCTTC | 5 cut(s) | 192, 502, 509, 574, 926 |
| HpyCH4III | ACNGT | 3 cut(s) | 556, 571, 978 |
| HpyCH4V | TGCA | 9 cut(s) | 101, 284, 293, 326, 371, 379, 385, 719, 907 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 290 |
| HpyF3I | CTNAG | 1 cut(s) | 613 |
| Hsp92II | CATG | 5 cut(s) | 17, 46, 479, 799, 839 |
| Kpn2I | TCCGGA | 1 cut(s) | 166 |
| Kzo9I | GATC | 5 cut(s) | 9, 20, 163, 355, 780 |
| LmnI | GCTCC | 2 cut(s) | 446, 837 |
| Lsp1109I | GCAGC | 2 cut(s) | 113, 383 |
| LweI | GCATC | 4 cut(s) | 286, 321, 640, 894 |
| MaeI | CTAG | 1 cut(s) | 65 |
| MaeIII | GTNAC | 1 cut(s) | 886 |
| MalI | GATC | 5 cut(s) | 11, 22, 165, 357, 782 |
| MboI | GATC | 5 cut(s) | 9, 20, 163, 355, 780 |
| MboII | GAAGA | 4 cut(s) | 95, 524, 660, 734 |
| MfeI | CAATTG | 1 cut(s) | 219 |
| MflI | RGATCY | 1 cut(s) | 163 |
| MlsI | TGGCCA | 1 cut(s) | 982 |
| MluCI | AATT | 6 cut(s) | 5, 187, 219, 503, 759, 908 |
| MluNI | TGGCCA | 1 cut(s) | 982 |
| MmeI | TCCRAC | 1 cut(s) | 365 |
| MnlI | CCTC | 8 cut(s) | 101, 260, 403, 445, 584, 881, 941, 944 |
| Mox20I | TGGCCA | 1 cut(s) | 982 |
| MroI | TCCGGA | 1 cut(s) | 166 |
| MscI | TGGCCA | 1 cut(s) | 982 |
| MseI | TTAA | 1 cut(s) | 56 |
| MslI | CAYNNNNRTG | 1 cut(s) | 752 |
| Msp20I | TGGCCA | 1 cut(s) | 982 |
| MspI | CCGG | 1 cut(s) | 167 |
| MspR9I | CCNGG | 2 cut(s) | 233, 576 |
| MunI | CAATTG | 1 cut(s) | 219 |
| Mva1269I | GAATGC | 1 cut(s) | 879 |
| MvaI | CCWGG | 2 cut(s) | 233, 576 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 290 |
| NdeI | CATATG | 1 cut(s) | 943 |
| NdeII | GATC | 5 cut(s) | 9, 20, 163, 355, 780 |
| NlaIII | CATG | 5 cut(s) | 17, 46, 479, 799, 839 |
| NmuCI | GTSAC | 1 cut(s) | 886 |
| PagI | TCATGA | 1 cut(s) | 795 |
| PctI | GAATGC | 1 cut(s) | 879 |
| PfeI | GAWTC | 1 cut(s) | 699 |
| PkrI | GCNGC | 2 cut(s) | 103, 373 |
| Psp6I | CCWGG | 2 cut(s) | 231, 574 |
| PspGI | CCWGG | 2 cut(s) | 231, 574 |
| PstNI | CAGNNNCTG | 1 cut(s) | 575 |
| PsuI | RGATCY | 1 cut(s) | 163 |
| RsaI | GTAC | 2 cut(s) | 120, 553 |
| RsaNI | GTAC | 2 cut(s) | 119, 552 |
| RseI | CAYNNNNRTG | 1 cut(s) | 752 |
| SaqAI | TTAA | 1 cut(s) | 56 |
| SatI | GCNGC | 2 cut(s) | 102, 372 |
| Sau3AI | GATC | 5 cut(s) | 9, 20, 163, 355, 780 |
| ScrFI | CCNGG | 2 cut(s) | 233, 576 |
| SetI | ASST | 5 cut(s) | 118, 370, 414, 451, 893 |
| SfaNI | GCATC | 4 cut(s) | 286, 321, 640, 894 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 752 |
| SmlI | CTYRAG | 1 cut(s) | 72 |
| SmoI | CTYRAG | 1 cut(s) | 72 |
| Sse9I | AATT | 6 cut(s) | 5, 187, 219, 503, 759, 908 |
| SspI | AATATT | 1 cut(s) | 108 |
| SspMI | CTAG | 1 cut(s) | 65 |
| StyD4I | CCNGG | 2 cut(s) | 231, 574 |
| TaaI | ACNGT | 3 cut(s) | 556, 571, 978 |
| TaqI | TCGA | 1 cut(s) | 19 |
| TasI | AATT | 6 cut(s) | 5, 187, 219, 503, 759, 908 |
| TfiI | GAWTC | 1 cut(s) | 699 |
| Tru1I | TTAA | 1 cut(s) | 56 |
| Tru9I | TTAA | 1 cut(s) | 56 |
| TscAI | CASTG | 1 cut(s) | 687 |
| TseFI | GTSAC | 1 cut(s) | 886 |
| TseI | GCWGC | 2 cut(s) | 101, 371 |
| Tsp45I | GTSAC | 1 cut(s) | 886 |
| TspDTI | ATGAA | 9 cut(s) | 17, 130, 492, 545, 633, 759, 784, 852, 922 |
| TspRI | CASTG | 1 cut(s) | 687 |
| XspI | CTAG | 1 cut(s) | 65 |