Prupe.2G082800_v2.0.a1

Domain of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000027
Physical Location & Seq
Reverse (-)
13114973 .. 13122098
7126 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G082800.1

Sequence Viewer

Length: 2106 bp
ATGGCAACAAAGGCCGTCTCCGCAGATGCAGCTGTTGTGGAGGTTCTTAATGGCCGTAACTATGTGGATTGGAGTGTATTGGTTAAAACTTACTTGTTGGCTCAAGACCTTTGGGATGTAGTGGAAGAAGACGAAGAAGAAGAAGAAGAAGCTGATGATAAGTTCAAAGCTTGGAGGAAGAAGAATGCCACGGCTTTACATACCATCCAAATTTCGTGCGGGCAGGAAGCTTTTTCCCTCATTAGGAACACCACTTCAGCCAAACGCGCTTGGGATACTTTGGCAGAAGAGTTCAAGCCAAAACCAAGATATTACAATGAGTACAATCAGTATAAGCCGTTGTTCGATGCTGTGTGGAGTGGCGACTGGAATAAAGCAAAGGAGTTTCTTACCTTACATCCCAATGCAATAAGAGCAACAATTCCTTCTACAAACGACACAGCTCTTCACGTAGCAACAGAACTAGAGCACGAGCATATTGTGGAAGAGTTGGTGCAGTTGATGTCAGAGGAAGACTTGGAAATAACAGATAATAATGGTTGGACAGCTCTTGCTCTTGCTGCAGATACGGGAAATGTAAAAATGGTTGAATGCATGGTTAGAAAGAGCAAGAAACTACTTAGTATTCCCACTGACAGCGACAAGACTCCAATTCTCTGCGCTTCTGTCAGTGAACAATGGGATGTCGTTCATTATCTTTACTCCGTCACTCCCCTCCAAGATCTAATACCAGAGAAAGGACCATACGGCGCTGCACTTCTTCACGACTTTATTATTGGCATGAAATTTGGTATTGCTTGGGAATTAATTCAGCGTTGCCCACAATTGGTTTTTACCAAGGGCCTCAATGGGGTATTCCCGATGGGAGGATTTATGCCTTCTGCATTCCCGAGTGGAATACGCCTCAAATTCTGGCAACGATGGATCTATAATTGTATACACATAGAGCGTGCCATCAGTGATATTCGTGTAAGTGTTCAAAATGAAGGAAATGAAGAATGTAATCGAATGAAGATCACTTGGTCAGCGGTAGGTTTCTTGCAAGCTTTGAAATCAAATCTCCTTGAACTTTTGGGAATCAACCGCATACGCGAAATAAAACAGGCCCACATTCAATCACTTGAACTCCTACATCGCATGTGTGAAATGATAAAACATTCACATAGCTGTGATTATGTACTCGGAGCAATGTTCACAGCTATCGAGCGAGGGATGTTTGAGTTTGCTGACAGTGTATTGCAAGCCAGACCAGATATCGTGTGGAGATCTAATAAAATGGGAAGGGACCCCTTTATGTTTGCAGTTGAATGTCGCCAAGAAAAAATTTATAGCCTTATTTATAGATTCGATAACAGAAAAAGAACATCGATTGGAAATTTGGCAGATATGTCTAACAATTGCGTGCTACATGTGGCCGGAATGCTATCCCCATTGGCAAAGTTCGATAATATCCCAGGTGCAGCTTTGCAAATGCAGAGAGAGCTGCAATGGTTTAAGGAGGTCGAGACTATAGTATTACCCCGGCTTAAAGAACATATGAATGACAATCGTATGACGCCGCGTCAGCTGTTTACAAAGAGCCACAAGCAATTGGTGAAGGAAGGAGAAAGATGGATGAAAGAAACTGCAACTTCTTGTACAGTTGTAGGTACTCTAATTATTACCATCATGTTTGCTGCAGCATTCACAGTACCTGGTGGAAACAACGGAGAAACAGGCTTCCCAATATTCTTGCATAAAAATTTATTTATGGCTTTTATAGTTTCAGATTCTATATCGCTCTTTTCTTCTACAACTTCGGTGTTGATGTTTTTGGGAATCCTTACATCACGTTATGCGGAAGATGATTTCCTCAAATCCTTACCAAAAAAGATGATAATAGGCCTTTCTACCTTATTCATCTCTATTGCCACCGTGATGGTCGCCTTTTCTTCCGCCCTTTTTATTATGATCCATGAACAGTCGTGGATTGTTATTCCAATGATTTTCCTTGCTAGTGTTCCTGTCACCTTATTTATTGGGATGCAATTTCCTCTTCTAGTTGAGATGTACATTTCTACTTATGGACGAGGAATATTTGACAGGAAAGTGAAATCAAGGGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 DUF4219 PGG

Protein Analysis

702

Amino Acids

79.74

Weight (kDa)

6.23

Isoelectric Point (pI)

39.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000027)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18670 AT3G18670 AT3G54065
fragaria_vesca FvH4_1g26570 FvH4_1g26570 FvH4_5g19270 FvH4_5g19273 FvH4_5g35840 FvH4_5g36340 FvH4_5g36630 FvH4_5g37181 FvH4_5g37182 FvH4_5g37185 FvH4_5g37240 FvH4_5g37260 FvH4_6g21440 FvH4_6g44571 FvH4_6g44572 FvH4_6g44610 FvH4_6g44620 FvH4_6g44650 FvH4_6g44660 FvH4_6g45151 FvH4_6g45152 FvH4_6g45152 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45154 FvH4_6g51440 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090
malus_domestica MD00G1010300.v1.1 MD00G1010400.v1.1 MD00G1010500.v1.1 MD00G1011000.v1.1 MD00G1011200.v1.1 MD00G1011500.v1.1 MD00G1011900.v1.1 MD03G1133900.v1.1 MD03G1134100.v1.1 MD09G1086300.v1.1 MD09G1086500.v1.1 MD09G1086900.v1.1 MD09G1087000.v1.1 MD09G1088000.v1.1 MD09G1088100.v1.1 MD09G1088200.v1.1 MD09G1088300.v1.1 MD09G1089000.v1.1 MD09G1089300.v1.1 MD09G1133800.v1.1 MD16G1219400.v1.1 MD17G1027900.v1.1 MD17G1028400.v1.1 MD17G1028600.v1.1 MD17G1028700.v1.1 MD17G1028900.v1.1 MD17G1029000.v1.1 MD17G1029100.v1.1 MD17G1029200.v1.1 MD17G1075400.v1.1 MD17G1076000.v1.1 MD17G1077000.v1.1 MD17G1077100.v1.1 MD17G1077800.v1.1 MD17G1078000.v1.1 MD17G1078100.v1.1 MD17G1078300.v1.1 MD17G1100900.v1.1 MD17G1101100.v1.1 MD17G1101400.v1.1 MD17G1104200.v1.1 MD17G1104500.v1.1 MD17G1121300.v1.1 MD17G1121600.v1.1 MD17G1121900.v1.1 MD17G1122700.v1.1 MD17G1218800.v1.1
prunus_persica Prupe.2G033800_v2.0.a1 Prupe.2G033900_v2.0.a1 Prupe.2G080300_v2.0.a1 Prupe.2G080700_v2.0.a1 Prupe.2G080900_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G082000_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082200_v2.0.a1 Prupe.2G082300_v2.0.a1 Prupe.2G082700_v2.0.a1 Prupe.2G082800_v2.0.a1 Prupe.2G082900_v2.0.a1 Prupe.3G235600_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236800_v2.0.a1 Prupe.3G237000_v2.0.a1 Prupe.3G237100_v2.0.a1 Prupe.3G237300_v2.0.a1 Prupe.3G237400_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.4G282500_v2.0.a1 Prupe.4G282500_v2.0.a1
pyrus_communis pycom03g08990 pycom03g09000 pycom09g01180 pycom09g01190 pycom09g01220 pycom09g01230 pycom09g01360 pycom09g01370 pycom09g01380 pycom09g01410 pycom09g05500 pycom11g10280 pycom11g10290 pycom11g10310 pycom16g18270 pycom16g18280 pycom17g02280 pycom17g02290 pycom17g02300 pycom17g02360 pycom17g02390 pycom17g02410 pycom17g02440 pycom17g02460 pycom17g02470 pycom17g02480 pycom17g02510 pycom17g02530 pycom17g02540 pycom17g02550 pycom17g02560 pycom17g02570 pycom17g02580 pycom17g02630 pycom17g02640 pycom17g04970 pycom17g04980 pycom17g05010 pycom17g07090 pycom17g07620 pycom17g07630 pycom17g07640 pycom17g07650 pycom17g07660 pycom17g07740 pycom17g07760 pycom17g07770 pycom17g09580 pycom17g11170 pycom17g11200 pycom17g11220 pycom17g11240 pycom17g11250 pycom17g11300 pycom17g11340 pycom17g11380 pycom17g11440
rosa_chinensis RchiOBHm_Chr1g0332901 RchiOBHm_Chr1g0338981 RchiOBHm_Chr1g0338991 RchiOBHm_Chr1g0341201 RchiOBHm_Chr1g0341211 RchiOBHm_Chr1g0342721 RchiOBHm_Chr1g0343191 RchiOBHm_Chr2g0146761 RchiOBHm_Chr2g0161791 RchiOBHm_Chr2g0161801 RchiOBHm_Chr2g0161841 RchiOBHm_Chr2g0162041 RchiOBHm_Chr2g0162651 RchiOBHm_Chr2g0162691 RchiOBHm_Chr2g0162701 RchiOBHm_Chr2g0162711 RchiOBHm_Chr2g0162721 RchiOBHm_Chr2g0162811 RchiOBHm_Chr2g0162831 RchiOBHm_Chr2g0162841 RchiOBHm_Chr4g0416381 RchiOBHm_Chr4g0416391 RchiOBHm_Chr5g0075981 RchiOBHm_Chr6g0276101 RchiOBHm_Chr7g0214581 RchiOBHm_Chr7g0214631 RchiOBHm_Chr7g0214651 RchiOBHm_Chr7g0214721 RchiOBHm_Chr7g0223161 RchiOBHm_Chr7g0230661 RchiOBHm_Chr7g0230751 RchiOBHm_Chr7g0230781 RchiOBHm_Chr7g0234581 RchiOBHm_Chr7g0234601 RchiOBHm_Chr7g0237561 RchiOBHm_Chr7g0237571 RchiOBHm_Chr7g0238781 RchiOBHm_Chr7g0238811 RchiOBHm_Chr7g0242161 RchiOBHm_Chr7g0242401 RchiOBHm_Chr7g0242451 RchiOBHm_Chr7g0242921 RchiOBHm_Chr7g0242981 RchiOBHm_Chr7g0243111 RchiOBHm_Chr7g0243251 RchiOBHm_Chr7g0243331
rosa_laevigata RLG00000000803 RLG00000000807 RLG00000000809 RLG00000000811 RLG00000000814 RLG00000000854 RLG00000000859 RLG00000000864 RLG00000000994 RLG00000000995 RLG00000001458 RLG00000001461 RLG00000001474 RLG00000001476 RLG00000002729 RLG00000002730 RLG00000003505 RLG00000008871 RLG00000008873 RLG00000018513 RLG00000021300 RLG00000021303 RLG00000021318 RLG00000021356 RLG00000021357 RLG00000029070 RLG00000029071 RLG00000029171 RLG00000029189 RLG00000029190 RLG00000029640 RLG00000034635
rosa_multiflora Rmu_co8149086.1_g000001 Rmu_co8460577.1_g000001 Rmu_sc0000429.1_g000062 Rmu_sc0000429.1_g000071 Rmu_sc0000429.1_g000081 Rmu_sc0000863.1_g000020 Rmu_sc0001488.1_g000011 Rmu_sc0001545.1_g000007 Rmu_sc0001849.1_g000068 Rmu_sc0001993.1_g000003 Rmu_sc0002222.1_g000002 Rmu_sc0002308.1_g000053 Rmu_sc0002308.1_g000069 Rmu_sc0002480.1_g000007 Rmu_sc0003179.1_g000041 Rmu_sc0004213.1_g000011 Rmu_sc0007101.1_g000012 Rmu_sc0008565.1_g000011 Rmu_sc0009298.1_g000003 Rmu_sc0010407.1_g000009 Rmu_sc0010407.1_g000013 Rmu_sc0026966.1_g000004 Rmu_ssc0000152.1_g000012 Rmu_ssc0000152.1_g000014 Rmu_ssc0000295.1_g000021 Rmu_ssc0000295.1_g000026
rosa_roxburghii Rroxscaffold_1G00029600 Rroxscaffold_2G00087790 Rroxscaffold_2G00087800 Rroxscaffold_2G00088360 Rroxscaffold_2G00088500 Rroxscaffold_2G00088530 Rroxscaffold_2G00088590 Rroxscaffold_3G00221570 Rroxscaffold_3G00222190 Rroxscaffold_3G00222240 Rroxscaffold_3G00222880 Rroxscaffold_3G00222900 Rroxscaffold_3G00223990 Rroxscaffold_3G00229750 Rroxscaffold_3G00229760 Rroxscaffold_3G00245140 Rroxscaffold_3G00245150 Rroxscaffold_3G00245200 Rroxscaffold_3G00253520 Rroxscaffold_3G00253530 Rroxscaffold_4G00294500 Rroxscaffold_4G00311800 Rroxscaffold_4G00311830 Rroxscaffold_4G00311850 Rroxscaffold_4G00313180 Rroxscaffold_4G00313210 Rroxscaffold_4G00316270 Rroxscaffold_4G00317910 Rroxscaffold_4G00317920 Rroxscaffold_5G00349290 Rroxscaffold_5G00349300 Rroxscaffold_5G00349310 Rroxscaffold_5G00351950 Rroxscaffold_5G00351960 Rroxscaffold_5G00353390 Rroxscaffold_7G00192540
rosa_rugosa Rorug01G0102500 Rorug01G0102600 Rorug01G0146400.1 Rorug01G0146500.1 Rorug01G0159400.1 Rorug01G0159500.1 Rorug02G0491900 Rorug02G0492000 Rorug02G0492100 Rorug02G0492200 Rorug02G0492300 Rorug02G0492400 Rorug02G0492500 Rorug02G0492700 Rorug02G0498500 Rorug02G0498600 Rorug02G0498800 Rorug04G0006900 Rorug04G0053700 Rorug06G0002000 Rorug06G0002100 Rorug07G0304700 Rorug07G0304800 Rorug07G0304800 Rorug07G0304800 Rorug07G0305300 Rorug07G0305400 Rorug07G0305500 Rorug07G0305500 Rorug07G0318300 Rorug07G0318600 Rorug07G0323600
rosa_samantha Rh1AG128900 Rh1AG162500 Rh1AG163000 Rh1AG164000 Rh1AG164700 Rh1AG173200 Rh1AG173300 Rh1AG173800 Rh1BG098100 Rh1BG129800 Rh1BG130600 Rh1BG141300 Rh1BG141500 Rh1BG141600 Rh1CG122700 Rh1CG151900 Rh1CG152400 Rh1CG153100 Rh1CG153500 Rh1CG161400 Rh1CG161600 Rh1DG134200 Rh1DG173500 Rh1DG173700 Rh2AG558100 Rh2AG558500 Rh2AG560200 Rh2AG564700 Rh2AG564800 Rh2BG465600 Rh2BG571700 Rh2BG572000 Rh2BG573500 Rh2CG439800 Rh2CG541800 Rh2CG542100 Rh2CG542200 Rh2CG543800 Rh2CG547300 Rh2DG474700 Rh2DG580600 Rh2DG580900 Rh2DG581200 Rh2DG581700 Rh2DG581800 Rh2DG583500 Rh2DG587200 Rh2DG587300 Rh2DG587400 Rh4AG128900 Rh4AG203800 Rh4AG319900 Rh4AG320000 Rh4BG122200 Rh4BG201100 Rh4CG136000 Rh4DG122400 Rh4DG201100 Rh4DG323600 Rh6BG077000 Rh6DG206200 Rh7AG282300 Rh7AG282500 Rh7AG283400 Rh7AG358600 Rh7AG414500 Rh7AG415200 Rh7AG415500 Rh7AG461700 Rh7AG469300 Rh7AG477800 Rh7BG273900 Rh7BG274000 Rh7BG390400 Rh7BG390500 Rh7BG391500 Rh7BG391800 Rh7BG408300 Rh7BG432000 Rh7BG439200 Rh7BG449200 Rh7BG449900 Rh7BG450400 Rh7BG450500 Rh7CG220900 Rh7CG301600 Rh7CG302700 Rh7CG377000 Rh7CG433900 Rh7CG434200 Rh7CG478800 Rh7DG286200 Rh7DG354000 Rh7DG424600 Rh7DG448000 Rh7DG462800 Rh7DG462900
rosa_wichuraiana Rw0G003440 Rw0G011970 Rw0G017120 Rw0G017130 Rw0G017140 Rw0G018470 Rw0G018480 Rw0G020440 Rw1G010470 Rw2G046180 Rw2G046210 Rw2G046230 Rw2G046390 Rw2G046400 Rw2G046710 Rw2G046720 Rw2G046730 Rw3G025310 Rw4G010410 Rw4G017250 Rw6G018270 Rw7G018180 Rw7G024130 Rw7G024160 Rw7G024170 Rw7G034060 Rw7G034250 Rw7G034260 Rw7G034400 Rw7G034410 Rw7G038210 Rw7G039020 Rw7G039060 Rw7G039280 Rw7G039400 Rw7G039470 Rw7G039880 Rw7G039890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 937
AccII CGCG 3 cut(s) 267, 1092, 1561
AciI CCGC 7 cut(s) 21, 219, 1028, 1084, 1559, 1838, 1935
AclWI GGATC 2 cut(s) 932, 1945
AcoI YGGCCR 2 cut(s) 52, 1413
AcsI RAATTY 6 cut(s) 210, 785, 908, 1323, 1375, 1741
AcuI CTGAAG 1 cut(s) 240
AcyI GRCGYC 1 cut(s) 1556
AfaI GTAC 6 cut(s) 323, 1179, 1639, 1651, 1692, 2051
AfiI CCNNNNNNNGG 5 cut(s) 243, 737, 826, 850, 866
AflIII ACRYGT 1 cut(s) 1408
AgsI TTSAA 9 cut(s) 166, 295, 590, 980, 1051, 1067, 1115, 1124, 1307
AhdI GACNNNNNGTC 1 cut(s) 1560
AjnI CCWGG 2 cut(s) 1453, 1693
Alw21I GWGCWC 1 cut(s) 471
Alw26I GTCTC 2 cut(s) 22, 1499
AlwI GGATC 2 cut(s) 932, 1945
AlwNI CAGNNNCTG 1 cut(s) 1694
Ama87I CYCGRG 1 cut(s) 889
AoxI GGCC 6 cut(s) 12, 52, 841, 1104, 1413, 1882
ApeKI GCWGC 7 cut(s) 29, 560, 752, 1460, 1483, 1676, 1679
ApoI RAATTY 6 cut(s) 210, 785, 908, 1323, 1375, 1741
AseI ATTAAT 1 cut(s) 806
Asp700I GAANNNNTTC 1 cut(s) 807
AspLEI GCGC 3 cut(s) 269, 662, 752
AspS9I GGNCC 4 cut(s) 740, 841, 1105, 1285
AsuC2I CCSGG 1 cut(s) 1522
AsuHPI GGTGA 2 cut(s) 1606, 1999
AvaI CYCGRG 1 cut(s) 889
AvaII GGWCC 2 cut(s) 740, 1285
BauI CACGAG 1 cut(s) 470
BbsI GAAGAC 2 cut(s) 135, 519
Bbv12I GWGCWC 1 cut(s) 471
BbvI GCAGC 7 cut(s) 41, 547, 739, 1470, 1472, 1663, 1691
BccI CCATC 7 cut(s) 212, 856, 915, 962, 1605, 1673, 1912
BceAI ACGGC 4 cut(s) 39, 207, 322, 763
BciT130I CCWGG 2 cut(s) 1455, 1695
BciVI GTATCC 1 cut(s) 268
BcnI CCSGG 1 cut(s) 1522
BcoDI GTCTC 2 cut(s) 22, 1499
BfaI CTAG 3 cut(s) 464, 1995, 2039
BfmI CTRYAG 3 cut(s) 561, 1509, 1677
BfoI RGCGCY 1 cut(s) 753
BfuI GTATCC 1 cut(s) 268
BglII AGATCT 2 cut(s) 721, 1265
BisI GCNGC 8 cut(s) 30, 561, 753, 1461, 1484, 1559, 1677, 1680
BlsI GCNGC 8 cut(s) 31, 562, 754, 1462, 1485, 1560, 1678, 1681
Bme1390I CCNGG 3 cut(s) 1455, 1522, 1695
Bme18I GGWCC 2 cut(s) 740, 1285
BmeRI GACNNNNNGTC 1 cut(s) 1560
BmeT110I CYCGRG 1 cut(s) 889
BmgT120I GGNCC 4 cut(s) 740, 841, 1105, 1285
BmiI GGNNCC 2 cut(s) 1286, 1287
BmrFI CCNGG 3 cut(s) 1455, 1522, 1695
BmsI GCATC 3 cut(s) 16, 337, 2013
BpiI GAAGAC 2 cut(s) 135, 519
BpuEI CTTGAG 1 cut(s) 87
BpuMI CCSGG 1 cut(s) 1522
Bsa29I ATCGAT 1 cut(s) 1367
BsaAI YACGTR 1 cut(s) 451
BsaHI GRCGYC 1 cut(s) 1556
BsaJI CCNNGG 4 cut(s) 189, 837, 1453, 1520
BsaXI ACNNNNNCTCC 2 cut(s) 1110, 1140
Bsc4I CCNNNNNNNGG 5 cut(s) 243, 737, 826, 850, 866
Bse1I ACTGG 1 cut(s) 371
Bse3DI GCAATG 2 cut(s) 1194, 1493
BseBI CCWGG 2 cut(s) 1455, 1695
BseCI ATCGAT 1 cut(s) 1367
BseDI CCNNGG 4 cut(s) 189, 837, 1453, 1520
BseGI GGATG 7 cut(s) 121, 204, 397, 688, 1218, 1620, 2028
BseLI CCNNNNNNNGG 5 cut(s) 243, 737, 826, 850, 866
BseMI GCAATG 2 cut(s) 1194, 1493
BseNI ACTGG 1 cut(s) 371
BseXI GCAGC 7 cut(s) 41, 547, 739, 1470, 1472, 1663, 1691
BsgI GTGCAG 3 cut(s) 515, 738, 1479
Bsh1236I CGCG 3 cut(s) 267, 1092, 1561
BshFI GGCC 6 cut(s) 14, 54, 843, 1106, 1415, 1884
BshVI ATCGAT 1 cut(s) 1367
BsiHKAI GWGCWC 1 cut(s) 471
BsiHKCI CYCGRG 1 cut(s) 889
BsiSI CCGG 2 cut(s) 1416, 1522
BslFI GGGAC 1 cut(s) 1298
BslI CCNNNNNNNGG 5 cut(s) 243, 737, 826, 850, 866
BsmAI GTCTC 2 cut(s) 22, 1499
BsmBI CGTCTC 1 cut(s) 22
BsmFI GGGAC 1 cut(s) 1298
BsmI GAATGC 5 cut(s) 190, 596, 884, 1425, 1682
BsnI GGCC 6 cut(s) 14, 54, 843, 1106, 1415, 1884
BsoBI CYCGRG 1 cut(s) 889
Bsp1286I GDGCHC 1 cut(s) 471
Bsp1407I TGTACA 2 cut(s) 1637, 2049
Bsp143I GATC 5 cut(s) 721, 924, 1014, 1265, 1950
BspACI CCGC 7 cut(s) 21, 219, 1028, 1084, 1559, 1838, 1935
BspANI GGCC 6 cut(s) 14, 54, 843, 1106, 1415, 1884
BspDI ATCGAT 1 cut(s) 1367
BspFNI CGCG 3 cut(s) 267, 1092, 1561
BspLI GGNNCC 2 cut(s) 1286, 1287
BspMAI CTGCAG 2 cut(s) 565, 1681
BspPI GGATC 2 cut(s) 932, 1945
BspQI GCTCTTC 1 cut(s) 450
BsrDI GCAATG 2 cut(s) 1194, 1493
BsrGI TGTACA 2 cut(s) 1637, 2049
BsrI ACTGG 1 cut(s) 371
BssECI CCNNGG 4 cut(s) 189, 837, 1453, 1520
BssMI GATC 5 cut(s) 721, 924, 1014, 1265, 1950
BssNAI GTATAC 1 cut(s) 938
BssNI GRCGYC 1 cut(s) 1556
BssSI CACGAG 1 cut(s) 470
BssT1I CCWWGG 1 cut(s) 837
Bst1107I GTATAC 1 cut(s) 938
Bst2BI CACGAG 1 cut(s) 470
Bst2UI CCWGG 2 cut(s) 1455, 1695
Bst4CI ACNGT 5 cut(s) 1232, 1642, 1690, 1915, 1962
Bst6I CTCTTC 4 cut(s) 282, 450, 480, 2040
BstACI GRCGYC 1 cut(s) 1556
BstAUI TGTACA 2 cut(s) 1637, 2049
BstBAI YACGTR 1 cut(s) 451
BstC8I GCNNGC 5 cut(s) 221, 951, 1044, 1242, 1403
BstDEI CTNAG 1 cut(s) 620
BstDSI CCRYGG 1 cut(s) 189
BstF5I GGATG 7 cut(s) 121, 204, 397, 688, 1218, 1620, 2028
BstFNI CGCG 3 cut(s) 267, 1092, 1561
BstH2I RGCGCY 1 cut(s) 753
BstHHI GCGC 3 cut(s) 269, 662, 752
BstKTI GATC 5 cut(s) 724, 927, 1017, 1268, 1953
BstMAI GTCTC 2 cut(s) 22, 1499
BstMBI GATC 5 cut(s) 721, 924, 1014, 1265, 1950
BstMWI GCNNNNNNNGC 8 cut(s) 11, 20, 29, 266, 413, 560, 1480, 1564
BstNI CCWGG 2 cut(s) 1455, 1695
BstNSI RCATGY 2 cut(s) 1141, 1412
BstSCI CCNGG 3 cut(s) 1453, 1520, 1693
BstSFI CTRYAG 3 cut(s) 561, 1509, 1677
BstUI CGCG 3 cut(s) 267, 1092, 1561
BstV1I GCAGC 7 cut(s) 41, 547, 739, 1470, 1472, 1663, 1691
BstV2I GAAGAC 2 cut(s) 135, 519
BstX2I RGATCY 3 cut(s) 721, 924, 1265
BstXI CCANNNNNNTGG 1 cut(s) 1918
BstYI RGATCY 3 cut(s) 721, 924, 1265
BstZ17I GTATAC 1 cut(s) 938
Bsu15I ATCGAT 1 cut(s) 1367
BsuI GTATCC 1 cut(s) 268
BsuRI GGCC 6 cut(s) 14, 54, 843, 1106, 1415, 1884
BsuTUI ATCGAT 1 cut(s) 1367
BtgI CCRYGG 1 cut(s) 189
BtgZI GCGATG 1 cut(s) 1118
BtsCI GGATG 7 cut(s) 121, 204, 397, 688, 1218, 1620, 2028
BtsIMutI CAGTG 4 cut(s) 630, 676, 964, 1237
Cac8I GCNNGC 5 cut(s) 221, 951, 1044, 1242, 1403
CaiI CAGNNNCTG 1 cut(s) 1694
CfoI GCGC 3 cut(s) 269, 662, 752
Cfr13I GGNCC 4 cut(s) 740, 841, 1105, 1285
ClaI ATCGAT 1 cut(s) 1367
CseI GACGC 2 cut(s) 1550, 1564
CsiI ACCWGGT 1 cut(s) 1693
Csp6I GTAC 6 cut(s) 322, 1178, 1638, 1650, 1691, 2050
CviAII CATG 6 cut(s) 595, 781, 1138, 1409, 1669, 1955
CviQI GTAC 6 cut(s) 322, 1178, 1638, 1650, 1691, 2050
DdeI CTNAG 1 cut(s) 620
DpnI GATC 5 cut(s) 723, 926, 1016, 1267, 1952
DpnII GATC 5 cut(s) 721, 924, 1014, 1265, 1950
DriI GACNNNNNGTC 1 cut(s) 1560
EaeI YGGCCR 2 cut(s) 52, 1413
Eam1104I CTCTTC 4 cut(s) 282, 450, 480, 2040
Eam1105I GACNNNNNGTC 1 cut(s) 1560
EarI CTCTTC 4 cut(s) 282, 450, 480, 2040
EciI GGCGGA 1 cut(s) 1924
Eco130I CCWWGG 1 cut(s) 837
Eco147I AGGCCT 1 cut(s) 1884
Eco32I GATATC 1 cut(s) 1255
Eco47I GGWCC 2 cut(s) 740, 1285
Eco57I CTGAAG 1 cut(s) 240
Eco88I CYCGRG 1 cut(s) 889
EcoO109I RGGNCCY 2 cut(s) 841, 1285
EcoRII CCWGG 2 cut(s) 1453, 1693
EcoRV GATATC 1 cut(s) 1255
EcoT14I CCWWGG 1 cut(s) 837
EcoT22I ATGCAT 1 cut(s) 596
ErhI CCWWGG 1 cut(s) 837
Esp3I CGTCTC 1 cut(s) 22
FaeI CATG 6 cut(s) 598, 784, 1141, 1412, 1672, 1958
FaqI GGGAC 1 cut(s) 1298
FatI CATG 6 cut(s) 594, 780, 1137, 1408, 1668, 1954
FauI CCCGC 1 cut(s) 212
FauNDI CATATG 1 cut(s) 1536
FblI GTMKAC 1 cut(s) 937
Fnu4HI GCNGC 8 cut(s) 30, 561, 753, 1461, 1484, 1559, 1677, 1680
FokI GGATG 7 cut(s) 128, 191, 384, 695, 1225, 1627, 2035
Fsp4HI GCNGC 8 cut(s) 30, 561, 753, 1461, 1484, 1559, 1677, 1680
FspBI CTAG 3 cut(s) 464, 1995, 2039
GlaI GCGC 3 cut(s) 268, 661, 751
GluI GCNGC 8 cut(s) 30, 561, 753, 1461, 1484, 1559, 1677, 1680
HaeII RGCGCY 1 cut(s) 753
HaeIII GGCC 6 cut(s) 14, 54, 843, 1106, 1415, 1884
HapII CCGG 2 cut(s) 1416, 1522
HgaI GACGC 2 cut(s) 1550, 1564
HhaI GCGC 3 cut(s) 269, 662, 752
Hin1I GRCGYC 1 cut(s) 1556
Hin1II CATG 6 cut(s) 598, 784, 1141, 1412, 1672, 1958
Hin6I GCGC 3 cut(s) 267, 660, 750
HinP1I GCGC 3 cut(s) 267, 660, 750
HindIII AAGCTT 3 cut(s) 168, 228, 1044
HinfI GANTC 5 cut(s) 646, 1077, 1344, 1769, 1818
HpaII CCGG 2 cut(s) 1416, 1522
HphI GGTGA 2 cut(s) 1606, 1999
Hpy166II GTNNAC 4 cut(s) 674, 938, 1194, 1572
Hpy188I TCNGA 3 cut(s) 508, 1184, 1768
Hpy188III TCNNGA 5 cut(s) 104, 764, 859, 889, 1504
Hpy8I GTNNAC 4 cut(s) 674, 938, 1194, 1572
HpyAV CCTTC 6 cut(s) 435, 888, 980, 1275, 1591, 1595
HpyCH4III ACNGT 5 cut(s) 1232, 1642, 1690, 1915, 1962
HpyCH4IV ACGT 2 cut(s) 450, 1831
HpyF10VI GCNNNNNNNGC 8 cut(s) 11, 20, 29, 266, 413, 560, 1480, 1564
HpyF3I CTNAG 1 cut(s) 620
HpySE526I ACGT 2 cut(s) 450, 1831
Hsp92I GRCGYC 1 cut(s) 1556
Hsp92II CATG 6 cut(s) 598, 784, 1141, 1412, 1672, 1958
HspAI GCGC 3 cut(s) 267, 660, 750
KflI GGGWCCC 1 cut(s) 1285
Kzo9I GATC 5 cut(s) 721, 924, 1014, 1265, 1950
LguI GCTCTTC 1 cut(s) 450
LmnI GCTCC 1 cut(s) 1184
Lsp1109I GCAGC 7 cut(s) 41, 547, 739, 1470, 1472, 1663, 1691
LweI GCATC 3 cut(s) 16, 337, 2013
MabI ACCWGGT 1 cut(s) 1693
MaeI CTAG 3 cut(s) 464, 1995, 2039
MaeII ACGT 2 cut(s) 450, 1831
MaeIII GTNAC 3 cut(s) 56, 706, 2005
MalI GATC 5 cut(s) 723, 926, 1016, 1267, 1952
MboI GATC 5 cut(s) 721, 924, 1014, 1265, 1950
MfeI CAATTG 3 cut(s) 824, 1396, 1589
MflI RGATCY 3 cut(s) 721, 924, 1265
MhlI GDGCHC 1 cut(s) 471
MlyI GAGTC 1 cut(s) 640
MmeI TCCRAC 1 cut(s) 521
Mph1103I ATGCAT 1 cut(s) 596
MroXI GAANNNNTTC 1 cut(s) 807
MseI TTAA 5 cut(s) 48, 84, 806, 1494, 1527
MslI CAYNNNNRTG 4 cut(s) 402, 1167, 1539, 1916
MspA1I CMGCKG 3 cut(s) 32, 1028, 1567
MspI CCGG 2 cut(s) 1416, 1522
MspR9I CCNGG 3 cut(s) 1455, 1522, 1695
MunI CAATTG 3 cut(s) 824, 1396, 1589
Mva1269I GAATGC 5 cut(s) 190, 596, 884, 1425, 1682
MvaI CCWGG 2 cut(s) 1455, 1695
MvnI CGCG 3 cut(s) 267, 1092, 1561
MwoI GCNNNNNNNGC 8 cut(s) 11, 20, 29, 266, 413, 560, 1480, 1564
NciI CCSGG 1 cut(s) 1522
NdeI CATATG 1 cut(s) 1536
NdeII GATC 5 cut(s) 721, 924, 1014, 1265, 1950
NlaIII CATG 6 cut(s) 598, 784, 1141, 1412, 1672, 1958
NlaIV GGNNCC 2 cut(s) 1286, 1287
NmuCI GTSAC 2 cut(s) 706, 2005
NsiI ATGCAT 1 cut(s) 596
NspI RCATGY 2 cut(s) 1141, 1412
PceI AGGCCT 1 cut(s) 1884
PciI ACATGT 1 cut(s) 1408
PciSI GCTCTTC 1 cut(s) 450
PctI GAATGC 5 cut(s) 190, 596, 884, 1425, 1682
PdmI GAANNNNTTC 1 cut(s) 807
PfeI GAWTC 4 cut(s) 1077, 1344, 1769, 1818
PkrI GCNGC 8 cut(s) 31, 562, 754, 1462, 1485, 1560, 1678, 1681
PleI GAGTC 1 cut(s) 640
PpsI GAGTC 1 cut(s) 640
Ppu21I YACGTR 1 cut(s) 451
PpuMI RGGWCCY 1 cut(s) 1285
PscI ACATGT 1 cut(s) 1408
PshBI ATTAAT 1 cut(s) 806
Psp5II RGGWCCY 1 cut(s) 1285
Psp6I CCWGG 2 cut(s) 1453, 1693
PspGI CCWGG 2 cut(s) 1453, 1693
PspN4I GGNNCC 2 cut(s) 1286, 1287
PspPI GGNCC 4 cut(s) 740, 841, 1105, 1285
PspPPI RGGWCCY 1 cut(s) 1285
PstI CTGCAG 2 cut(s) 565, 1681
PstNI CAGNNNCTG 1 cut(s) 1694
PsuI RGATCY 3 cut(s) 721, 924, 1265
PvuII CAGCTG 2 cut(s) 32, 1567
RsaI GTAC 6 cut(s) 323, 1179, 1639, 1651, 1692, 2051
RsaNI GTAC 6 cut(s) 322, 1178, 1638, 1650, 1691, 2050
RseI CAYNNNNRTG 4 cut(s) 402, 1167, 1539, 1916
SapI GCTCTTC 1 cut(s) 450
SaqAI TTAA 5 cut(s) 48, 84, 806, 1494, 1527
SatI GCNGC 8 cut(s) 30, 561, 753, 1461, 1484, 1559, 1677, 1680
Sau3AI GATC 5 cut(s) 721, 924, 1014, 1265, 1950
Sau96I GGNCC 4 cut(s) 740, 841, 1105, 1285
SchI GAGTC 1 cut(s) 640
ScrFI CCNGG 3 cut(s) 1455, 1522, 1695
SduI GDGCHC 1 cut(s) 471
SexAI ACCWGGT 1 cut(s) 1693
SfaNI GCATC 3 cut(s) 16, 337, 2013
SfcI CTRYAG 3 cut(s) 561, 1509, 1677
SinI GGWCC 2 cut(s) 740, 1285
SmiMI CAYNNNNRTG 4 cut(s) 402, 1167, 1539, 1916
SmlI CTYRAG 1 cut(s) 102
SmoI CTYRAG 1 cut(s) 102
SseBI AGGCCT 1 cut(s) 1884
SsiI CCGC 7 cut(s) 21, 219, 1028, 1084, 1559, 1838, 1935
SspI AATATT 2 cut(s) 1728, 2076
SspMI CTAG 3 cut(s) 464, 1995, 2039
StuI AGGCCT 1 cut(s) 1884
StyD4I CCNGG 3 cut(s) 1453, 1520, 1693
StyI CCWWGG 1 cut(s) 837
TaaI ACNGT 5 cut(s) 1232, 1642, 1690, 1915, 1962
TaiI ACGT 2 cut(s) 453, 1834
TaqI TCGA 7 cut(s) 345, 1006, 1203, 1347, 1367, 1443, 1503
TatI WGTACW 4 cut(s) 321, 1177, 1637, 2049
TauI GCSGC 1 cut(s) 1561
TfiI GAWTC 4 cut(s) 1077, 1344, 1769, 1818
Tru1I TTAA 5 cut(s) 48, 84, 806, 1494, 1527
Tru9I TTAA 5 cut(s) 48, 84, 806, 1494, 1527
TscAI CASTG 4 cut(s) 637, 676, 964, 1237
TseFI GTSAC 2 cut(s) 706, 2005
TseI GCWGC 7 cut(s) 29, 560, 752, 1460, 1483, 1676, 1679
Tsp45I GTSAC 2 cut(s) 706, 2005
TspDTI ATGAA 9 cut(s) 680, 797, 999, 1008, 1025, 1553, 1631, 1888, 1971
TspGWI ACGGA 2 cut(s) 694, 1722
TspRI CASTG 4 cut(s) 637, 676, 964, 1237
VpaK11BI GGWCC 2 cut(s) 740, 1285
VspI ATTAAT 1 cut(s) 806
XapI RAATTY 6 cut(s) 210, 785, 908, 1323, 1375, 1741
XceI RCATGY 2 cut(s) 1141, 1412
XcmI CCANNNNNNNNNTGG 1 cut(s) 1257
XmiI GTMKAC 1 cut(s) 937
XmnI GAANNNNTTC 1 cut(s) 807
XspI CTAG 3 cut(s) 464, 1995, 2039
Zsp2I ATGCAT 1 cut(s) 596
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.