Rorug02G0492300

Domain of unknown function

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
62139810 .. 62146971
7162 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0492300.1

Sequence Viewer

Length: 4098 bp
ATGGATGAAACACAAGTGAGAGCAGATATCCCAGTGAAGGCTGTTGAAGAAGCTGAGACTAACGAAAAGGTGTCAAATGGAGACTTCCTACCGATTGGAAAAGAAGGAAAGAAAGAAGAGGATGAAGCTAATTTCGATGGAGAGTTCATTAAAGTTGAGAAGGAATCACTAGCTGAAAAGACATTGGCGGAGGGGGACAGCAAGTCATCTGTTATTGAGAGAAGCACAAGCAATTCAAGCAGGGAGTTACTAGAAGCGCGGGAGAAGACAGGTGAACTTGAGCTAGAGATTGAAAGATTGGCTGGTGTGTTGAAGCAATCGGAGTCAGAGAATTCCGAGCTGAAGAATGAGGTCTTACTTACAAAGGAGAAGCTCGAAGAAATTGGAAAGAAGAACGAGGAGCTGGAACTCAGTCACAAGAAATTGCAAGAGCAGATCACTGAAGCTGAGGAGAAGTACATTTCACAACTCAGTGTTTTGCAAGAGGCATTGCAAGCTCAAGAAGAAAAGCACAAGGATCTTATTGGGGTGAAGGAATCATTCGATGGTCTAAGCCTCGAGCTCGAAAGCTCGAGAAAGAGGATGCAGGAGCTGGAGCAAGAGCTGCAGAGTTCTGTAGGTGAAGTGCAGAAGTTTGAGGAGCTGCACAAGCAAAGTGGTTCGCACGCCGAGTCTGAGACAAAGAGGGCCTTGGAGTTCGAGAAGCTGCTTGAAGTGGCAAAAGTGAGTGCTAAAGAGATGGAAGAGCAGATGGGTGCTATTCAAGGAGAACTTAAGGGATTGTATGACAAGATTGCTGAAGATGAAAAAGTTAAGGAAGCACTTCAGTCTGCTGCTGCTGAGCTTTCTGCAGTCCAAGAGGAGCTGGTTCTGTCAAAGTCCCAAGGTGTAGACTTGGAGCAACGACTTTCTGATAAAGAAGCTCTTATAAGTGAACTAACCGCGGAATTGGACCTGAAAAAGGCTTCCGAGTCTCAAGTGAAGGAAGACATTTCAGCTCTTGAAAATCTGTTAGCCTCGACCAAAGAAGATCTCCAGGCAAAGGTTTCCGAGTTGGAAGAAATCAAGTTGAAGCTGCAGGAGGAATCAAGCGCTAAGGAATTGGTTGAAGCTGCGAAAAGAACCCACGAAGAACAGGTCTTAGTTGTACAGGAGCAGTTGTCTATAGTAACTAAAGAAAAAGAAGCAGTGGAAGCAGCTGTGGCTGATCTCACTGGTAATGTACAGCTGATGAAGGAGTTGTGCAGTGATCTTGAAGAAAAATTGAAACTTTCGGAGGAGAATTTTGGAAAAACAGATTCTCTATTGTCTGAAGCTTTGTCGAACAATGTAGAGCTGGAACAGAAGTTGAAGTCATTGGAGGAGCTCCATAGCGAATCAGGAGCTGCACATGCAACTGCTACTCAAAAAAATATTGAGCTCGAGGGTGTTATTCGATCTTCAACTGCAGCAGCAGAAGAAGTGAAATTGCAACTGACAGAGCTTCAGACACGCTTTATAGCAGTCGAACAAAAGAATGTAGAGCTTGAGCAACAATTAAATGCGGTAGAGTTGAACAAAGGAATTGCTGAGAGAAATCTGGAAGAATTTTCTGAAAAAGTATCGGCACTCACTGCAACATTGGGAGAGGTTGAGGCAGAAAAGAATCAGCTAAATGGTCAGGTTCAAGAATACCAAGAGAAGATACCACAGCTGGAATCTGCCTTAAACCAGTCATCTTTGCAAAATGCAGAGCTTCAGGAGCAATTGAAGATTTCCACCGAGAAATGCTCTGAACATGAGGGCAAAGCCACTACAATTCATCAGCGAAGCCTGGAACTCGAAGATTTGATCCAAGTGTCTCATTCCAAAGTGGAGGATGCCGGTAAAAAGGCGAGTGAGCTGGAGTTGTTACTTGAAACTGAGAAGTATAGAATTCAAGAACTTGAGGAACAAATAAGCACATTGGAGAAGAAATATGAGGATGCTGAAGCAGATTCAAAGAAGTACTCAAATAAAGTATCTGAACTTGCTTCTGAACTCGAGGCATTCCAAGAAAGAACATCTAGCCTTGAAGTTGCACTGCAGACGGCGAAAGACAAGGAAAGGCAGTTGACAGAATCCTTGAATGTTGCTACTGAAGAGAAGAAAATGTTAGAAGATGCCTCAAACAGCTCGACTGAGAAGTATTCCGAAGCGGAAAATCTAGTGGAAGTCTTGAGGAATGAATTGATTGAAACTCAAGAGAAATTGGTGAAAATCGAAGATGATCTTAAGGCTGCTGGAATCAGAGAAGGTGAGGTCGTAGAGAAACTCAAGTTGGCGGAGGAGCAACTGGAACAACATAGCAAACTGATAGAGCAAACATCATCAAGAAACTTAGAACTTGAATCGCTACATGAATCCCTGACGAGGGATTCAGAGACTAAACTCCAAGAAGCAATAGGAAACTTCACTAACAGGGATTCTGAGGCAAAATCTCTTGCTGAGAAGCTGAATGTTCTTGAAGATCAGGTGAAGGCTTATGAAGAGCAAGTTGCTGCAACAGCCGAAAAATCTGCATCTTTGAAAGAAGAACTGGATAATTGTTTGCGTAAATTGGCTTCTTCAGAAAGTACAAATGAAGAACTCCGAAAACAGTTCTTGGAAGCAGAAGACAAAGCCTCTCAATCATTCTCAGAAAATGAACTGTTGGTTGGGACAAATGTTCAGCTAAAAAGCAAGATAGATGAATTACAGGAATTGTTGAACTCTGCTCTATCTGAAAAAGAAGCCACTACTGGACACCTTATTTCCCACAAGAGCACTATTGAGGAGTTAACAGAGAAACACTCGAGAGCCTTTGATCTCCATTCTGCTGCTGAAGCTCGCATTCTGGAATCAGAAGCAAAGCTACAAGAAGCCACTCAGAGATTCAGTGAGAAGGATTTGGAAGCTAAAGATCTGAACGAGAAACTAATTGCACTGGAAGCCCAAATAAAGGTCTATGAAGAGAAGGCTCAAGAGTCGTCTGCAATTTCCGAAACCAGTAAAGTAGAGCTAGAAGAGGCTCTCTTGAAGCTGAAGCAGCTTGATATTACTGTTGAGGAACTACAAACTAAGTCGGCTCACTTTGAAGAAGAAAGCAGAAAGCTAGCCGAGGCAAATGTTAAGCTTACAGAGGAAGTGTCTATATATGAGTCCAAAGTGAGTGATCTAGAAGCAAAGTTATCTGCCACCATCGCTGAGAAGGATGACACAGTTGAACAACTTCAGACTTCACAAAAGACTATAGAAGAGTTAACACAGCAGCTTTCTTCTGAGGGGCAAAAACTACAATCTCAGATATCTTCGGTTATGGATGAGAACAACCTGCTAAATGAACTGCATCAAAGTACCAAGAAGGAACTTCAGCAAGTGATATCCCAGCTCGAAGAACAACTGCAGGAACACAAAGCAGGAGGAGATGCTTTAAAATCTGAGTTCGAAAATCTCAAGGCTGAGGTTGCTGAAAAACCTTTGTTACAGAAGTCTCTCAAGGAACTCGAAGAACAGTTGGTGAAAACTGAAGCTCAACTAGCAAAAGAGGTTGAAAGCGTTAAGGTGGCTGCTGCTGCAAGAGAGGCAGAGTTGACAACAAAATTGGAGGATCATGCAATTAAAGTCCATGATAGAGATTTATTAAATGAACAAGTTCTAAACCTTCAGAGAGAGTTAGAAATTGCTCAGACCGCTGTTTCTGAAAAGAAAGAAGCGGATTCTCAAAAGGACCTGGAACGAGAAGCAGCGTTGAAGCAGTCTCTTGAGCAACTTGAAGCTAAGAACAAGGAAGTCACACTTCTAGATAAGCAAGTCAAAGACCTTGAGCAAAAATTACAGCTTTCTGATGCCAATATAAACGAAAAGGGTGATATCTCAGGATTGGAAGTGAAATCCCGGGACATTGGATCAACCATTACAACTCCATCGAAAAGGAAGAGTAAGAAAAAGTCTGAAGCAACAACTTCTGCTCAAGCCTCATCCTCATCAGAGAGCCTTACTCACACTGCCAATGCTTCCCCAATGATGACCATTAAGGTCATATTTGGAGTGGCTCTTGTGTCTGTCATCCTTGGCATCATTCTTGGGAAACGATATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1365

Amino Acids

152.62

Weight (kDa)

4.7

Isoelectric Point (pI)

48.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000027)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18670 AT3G18670 AT3G54065
fragaria_vesca FvH4_1g26570 FvH4_1g26570 FvH4_5g19270 FvH4_5g19273 FvH4_5g35840 FvH4_5g36340 FvH4_5g36630 FvH4_5g37181 FvH4_5g37182 FvH4_5g37185 FvH4_5g37240 FvH4_5g37260 FvH4_6g21440 FvH4_6g44571 FvH4_6g44572 FvH4_6g44610 FvH4_6g44620 FvH4_6g44650 FvH4_6g44660 FvH4_6g45151 FvH4_6g45152 FvH4_6g45152 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45154 FvH4_6g51440 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090
malus_domestica MD00G1010300.v1.1 MD00G1010400.v1.1 MD00G1010500.v1.1 MD00G1011000.v1.1 MD00G1011200.v1.1 MD00G1011500.v1.1 MD00G1011900.v1.1 MD03G1133900.v1.1 MD03G1134100.v1.1 MD09G1086300.v1.1 MD09G1086500.v1.1 MD09G1086900.v1.1 MD09G1087000.v1.1 MD09G1088000.v1.1 MD09G1088100.v1.1 MD09G1088200.v1.1 MD09G1088300.v1.1 MD09G1089000.v1.1 MD09G1089300.v1.1 MD09G1133800.v1.1 MD16G1219400.v1.1 MD17G1027900.v1.1 MD17G1028400.v1.1 MD17G1028600.v1.1 MD17G1028700.v1.1 MD17G1028900.v1.1 MD17G1029000.v1.1 MD17G1029100.v1.1 MD17G1029200.v1.1 MD17G1075400.v1.1 MD17G1076000.v1.1 MD17G1077000.v1.1 MD17G1077100.v1.1 MD17G1077800.v1.1 MD17G1078000.v1.1 MD17G1078100.v1.1 MD17G1078300.v1.1 MD17G1100900.v1.1 MD17G1101100.v1.1 MD17G1101400.v1.1 MD17G1104200.v1.1 MD17G1104500.v1.1 MD17G1121300.v1.1 MD17G1121600.v1.1 MD17G1121900.v1.1 MD17G1122700.v1.1 MD17G1218800.v1.1
prunus_persica Prupe.2G033800_v2.0.a1 Prupe.2G033900_v2.0.a1 Prupe.2G080300_v2.0.a1 Prupe.2G080700_v2.0.a1 Prupe.2G080900_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G082000_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082200_v2.0.a1 Prupe.2G082300_v2.0.a1 Prupe.2G082700_v2.0.a1 Prupe.2G082800_v2.0.a1 Prupe.2G082900_v2.0.a1 Prupe.3G235600_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236800_v2.0.a1 Prupe.3G237000_v2.0.a1 Prupe.3G237100_v2.0.a1 Prupe.3G237300_v2.0.a1 Prupe.3G237400_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.4G282500_v2.0.a1 Prupe.4G282500_v2.0.a1
pyrus_communis pycom03g08990 pycom03g09000 pycom09g01180 pycom09g01190 pycom09g01220 pycom09g01230 pycom09g01360 pycom09g01370 pycom09g01380 pycom09g01410 pycom09g05500 pycom11g10280 pycom11g10290 pycom11g10310 pycom16g18270 pycom16g18280 pycom17g02280 pycom17g02290 pycom17g02300 pycom17g02360 pycom17g02390 pycom17g02410 pycom17g02440 pycom17g02460 pycom17g02470 pycom17g02480 pycom17g02510 pycom17g02530 pycom17g02540 pycom17g02550 pycom17g02560 pycom17g02570 pycom17g02580 pycom17g02630 pycom17g02640 pycom17g04970 pycom17g04980 pycom17g05010 pycom17g07090 pycom17g07620 pycom17g07630 pycom17g07640 pycom17g07650 pycom17g07660 pycom17g07740 pycom17g07760 pycom17g07770 pycom17g09580 pycom17g11170 pycom17g11200 pycom17g11220 pycom17g11240 pycom17g11250 pycom17g11300 pycom17g11340 pycom17g11380 pycom17g11440
rosa_chinensis RchiOBHm_Chr1g0332901 RchiOBHm_Chr1g0338981 RchiOBHm_Chr1g0338991 RchiOBHm_Chr1g0341201 RchiOBHm_Chr1g0341211 RchiOBHm_Chr1g0342721 RchiOBHm_Chr1g0343191 RchiOBHm_Chr2g0146761 RchiOBHm_Chr2g0161791 RchiOBHm_Chr2g0161801 RchiOBHm_Chr2g0161841 RchiOBHm_Chr2g0162041 RchiOBHm_Chr2g0162651 RchiOBHm_Chr2g0162691 RchiOBHm_Chr2g0162701 RchiOBHm_Chr2g0162711 RchiOBHm_Chr2g0162721 RchiOBHm_Chr2g0162811 RchiOBHm_Chr2g0162831 RchiOBHm_Chr2g0162841 RchiOBHm_Chr4g0416381 RchiOBHm_Chr4g0416391 RchiOBHm_Chr5g0075981 RchiOBHm_Chr6g0276101 RchiOBHm_Chr7g0214581 RchiOBHm_Chr7g0214631 RchiOBHm_Chr7g0214651 RchiOBHm_Chr7g0214721 RchiOBHm_Chr7g0223161 RchiOBHm_Chr7g0230661 RchiOBHm_Chr7g0230751 RchiOBHm_Chr7g0230781 RchiOBHm_Chr7g0234581 RchiOBHm_Chr7g0234601 RchiOBHm_Chr7g0237561 RchiOBHm_Chr7g0237571 RchiOBHm_Chr7g0238781 RchiOBHm_Chr7g0238811 RchiOBHm_Chr7g0242161 RchiOBHm_Chr7g0242401 RchiOBHm_Chr7g0242451 RchiOBHm_Chr7g0242921 RchiOBHm_Chr7g0242981 RchiOBHm_Chr7g0243111 RchiOBHm_Chr7g0243251 RchiOBHm_Chr7g0243331
rosa_laevigata RLG00000000803 RLG00000000807 RLG00000000809 RLG00000000811 RLG00000000814 RLG00000000854 RLG00000000859 RLG00000000864 RLG00000000994 RLG00000000995 RLG00000001458 RLG00000001461 RLG00000001474 RLG00000001476 RLG00000002729 RLG00000002730 RLG00000003505 RLG00000008871 RLG00000008873 RLG00000018513 RLG00000021300 RLG00000021303 RLG00000021318 RLG00000021356 RLG00000021357 RLG00000029070 RLG00000029071 RLG00000029171 RLG00000029189 RLG00000029190 RLG00000029640 RLG00000034635
rosa_multiflora Rmu_co8149086.1_g000001 Rmu_co8460577.1_g000001 Rmu_sc0000429.1_g000062 Rmu_sc0000429.1_g000071 Rmu_sc0000429.1_g000081 Rmu_sc0000863.1_g000020 Rmu_sc0001488.1_g000011 Rmu_sc0001545.1_g000007 Rmu_sc0001849.1_g000068 Rmu_sc0001993.1_g000003 Rmu_sc0002222.1_g000002 Rmu_sc0002308.1_g000053 Rmu_sc0002308.1_g000069 Rmu_sc0002480.1_g000007 Rmu_sc0003179.1_g000041 Rmu_sc0004213.1_g000011 Rmu_sc0007101.1_g000012 Rmu_sc0008565.1_g000011 Rmu_sc0009298.1_g000003 Rmu_sc0010407.1_g000009 Rmu_sc0010407.1_g000013 Rmu_sc0026966.1_g000004 Rmu_ssc0000152.1_g000012 Rmu_ssc0000152.1_g000014 Rmu_ssc0000295.1_g000021 Rmu_ssc0000295.1_g000026
rosa_roxburghii Rroxscaffold_1G00029600 Rroxscaffold_2G00087790 Rroxscaffold_2G00087800 Rroxscaffold_2G00088360 Rroxscaffold_2G00088500 Rroxscaffold_2G00088530 Rroxscaffold_2G00088590 Rroxscaffold_3G00221570 Rroxscaffold_3G00222190 Rroxscaffold_3G00222240 Rroxscaffold_3G00222880 Rroxscaffold_3G00222900 Rroxscaffold_3G00223990 Rroxscaffold_3G00229750 Rroxscaffold_3G00229760 Rroxscaffold_3G00245140 Rroxscaffold_3G00245150 Rroxscaffold_3G00245200 Rroxscaffold_3G00253520 Rroxscaffold_3G00253530 Rroxscaffold_4G00294500 Rroxscaffold_4G00311800 Rroxscaffold_4G00311830 Rroxscaffold_4G00311850 Rroxscaffold_4G00313180 Rroxscaffold_4G00313210 Rroxscaffold_4G00316270 Rroxscaffold_4G00317910 Rroxscaffold_4G00317920 Rroxscaffold_5G00349290 Rroxscaffold_5G00349300 Rroxscaffold_5G00349310 Rroxscaffold_5G00351950 Rroxscaffold_5G00351960 Rroxscaffold_5G00353390 Rroxscaffold_7G00192540
rosa_rugosa Rorug01G0102500 Rorug01G0102600 Rorug01G0146400.1 Rorug01G0146500.1 Rorug01G0159400.1 Rorug01G0159500.1 Rorug02G0491900 Rorug02G0492000 Rorug02G0492100 Rorug02G0492200 Rorug02G0492300 Rorug02G0492400 Rorug02G0492500 Rorug02G0492700 Rorug02G0498500 Rorug02G0498600 Rorug02G0498800 Rorug04G0006900 Rorug04G0053700 Rorug06G0002000 Rorug06G0002100 Rorug07G0304700 Rorug07G0304800 Rorug07G0304800 Rorug07G0304800 Rorug07G0305300 Rorug07G0305400 Rorug07G0305500 Rorug07G0305500 Rorug07G0318300 Rorug07G0318600 Rorug07G0323600
rosa_samantha Rh1AG128900 Rh1AG162500 Rh1AG163000 Rh1AG164000 Rh1AG164700 Rh1AG173200 Rh1AG173300 Rh1AG173800 Rh1BG098100 Rh1BG129800 Rh1BG130600 Rh1BG141300 Rh1BG141500 Rh1BG141600 Rh1CG122700 Rh1CG151900 Rh1CG152400 Rh1CG153100 Rh1CG153500 Rh1CG161400 Rh1CG161600 Rh1DG134200 Rh1DG173500 Rh1DG173700 Rh2AG558100 Rh2AG558500 Rh2AG560200 Rh2AG564700 Rh2AG564800 Rh2BG465600 Rh2BG571700 Rh2BG572000 Rh2BG573500 Rh2CG439800 Rh2CG541800 Rh2CG542100 Rh2CG542200 Rh2CG543800 Rh2CG547300 Rh2DG474700 Rh2DG580600 Rh2DG580900 Rh2DG581200 Rh2DG581700 Rh2DG581800 Rh2DG583500 Rh2DG587200 Rh2DG587300 Rh2DG587400 Rh4AG128900 Rh4AG203800 Rh4AG319900 Rh4AG320000 Rh4BG122200 Rh4BG201100 Rh4CG136000 Rh4DG122400 Rh4DG201100 Rh4DG323600 Rh6BG077000 Rh6DG206200 Rh7AG282300 Rh7AG282500 Rh7AG283400 Rh7AG358600 Rh7AG414500 Rh7AG415200 Rh7AG415500 Rh7AG461700 Rh7AG469300 Rh7AG477800 Rh7BG273900 Rh7BG274000 Rh7BG390400 Rh7BG390500 Rh7BG391500 Rh7BG391800 Rh7BG408300 Rh7BG432000 Rh7BG439200 Rh7BG449200 Rh7BG449900 Rh7BG450400 Rh7BG450500 Rh7CG220900 Rh7CG301600 Rh7CG302700 Rh7CG377000 Rh7CG433900 Rh7CG434200 Rh7CG478800 Rh7DG286200 Rh7DG354000 Rh7DG424600 Rh7DG448000 Rh7DG462800 Rh7DG462900
rosa_wichuraiana Rw0G003440 Rw0G011970 Rw0G017120 Rw0G017130 Rw0G017140 Rw0G018470 Rw0G018480 Rw0G020440 Rw1G010470 Rw2G046180 Rw2G046210 Rw2G046230 Rw2G046390 Rw2G046400 Rw2G046710 Rw2G046720 Rw2G046730 Rw3G025310 Rw4G010410 Rw4G017250 Rw6G018270 Rw7G018180 Rw7G024130 Rw7G024160 Rw7G024170 Rw7G034060 Rw7G034250 Rw7G034260 Rw7G034400 Rw7G034410 Rw7G038210 Rw7G039020 Rw7G039060 Rw7G039280 Rw7G039400 Rw7G039470 Rw7G039880 Rw7G039890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 929
Acc36I ACCTGC 1 cut(s) 3339
AccI GTMKAC 1 cut(s) 891
AccII CGCG 2 cut(s) 259, 944
AciI CCGC 9 cut(s) 188, 259, 942, 944, 1544, 2177, 2303, 3690, 3713
AclWI GGATC 4 cut(s) 525, 1825, 3615, 3913
AcsI RAATTY 4 cut(s) 331, 1282, 1586, 1914
AfaI GTAC 6 cut(s) 458, 1149, 1224, 1988, 2596, 3355
AfeI AGCGCT 1 cut(s) 1093
AfiI CCNNNNNNNGG 6 cut(s) 37, 961, 1042, 2391, 2392, 2959
AflII CTTAAG 2 cut(s) 773, 2252
AhdI GACNNNNNGTC 1 cut(s) 202
AjnI CCWGG 3 cut(s) 1035, 1812, 3729
AjuI GAANNNNNNNTTGG 4 cut(s) 2282, 2314, 2658, 2690
Alw21I GWGCWC 4 cut(s) 564, 1368, 1422, 2786
Alw26I GTCTC 8 cut(s) 50, 75, 671, 978, 1845, 2396, 3495, 3762
AlwI GGATC 4 cut(s) 525, 1825, 3615, 3913
AlwNI CAGNNNCTG 2 cut(s) 592, 1385
Ama87I CYCGRG 6 cut(s) 557, 571, 1421, 2021, 2812, 3894
Aor51HI AGCGCT 1 cut(s) 1093
AoxI GGCC 1 cut(s) 687
ApoI RAATTY 4 cut(s) 331, 1282, 1586, 1914
ArsI GACNNNNNNTTYG 2 cut(s) 1122, 1154
Asp700I GAANNNNTTC 3 cut(s) 822, 3228, 3651
AspLEI GCGC 2 cut(s) 259, 1094
AspS9I GGNCC 3 cut(s) 687, 952, 3727
AsuC2I CCSGG 2 cut(s) 3895, 3896
AsuHPI GGTGA 8 cut(s) 284, 541, 632, 2245, 2288, 2506, 3529, 3878
AsuII TTCGAA 1 cut(s) 3444
AsuNHI GCTAGC 1 cut(s) 3112
AvaI CYCGRG 6 cut(s) 557, 571, 1421, 2021, 2812, 3894
AvaII GGWCC 2 cut(s) 952, 3727
BanII GRGCYC 3 cut(s) 564, 1368, 1422
BarI GAAGNNNNNNTAC 4 cut(s) 2566, 2598, 2856, 2888
BbsI GAAGAC 3 cut(s) 272, 993, 2640
Bbv12I GWGCWC 4 cut(s) 564, 1368, 1422, 2786
BbvCI CCTCAGC 2 cut(s) 447, 3459
BccI CCATC 6 cut(s) 131, 539, 733, 745, 3206, 3931
BceAI ACGGC 1 cut(s) 2085
BcgI CGANNNNNNTGC 2 cut(s) 2519, 2553
BciT130I CCWGG 3 cut(s) 1037, 1814, 3731
BcnI CCSGG 2 cut(s) 3895, 3896
BcoDI GTCTC 8 cut(s) 50, 75, 671, 978, 1845, 2396, 3495, 3762
BfmI CTRYAG 9 cut(s) 605, 615, 849, 1076, 1164, 1446, 2063, 3249, 3401
BfoI RGCGCY 1 cut(s) 1095
BfrI CTTAAG 2 cut(s) 773, 2252
BfuAI ACCTGC 1 cut(s) 3339
BglII AGATCT 2 cut(s) 1030, 2920
BlpI GCTNAGC 1 cut(s) 840
BmcAI AGTACT 1 cut(s) 1988
Bme1390I CCNGG 5 cut(s) 1037, 1814, 3731, 3895, 3896
Bme18I GGWCC 2 cut(s) 952, 3727
BmeRI GACNNNNNGTC 1 cut(s) 202
BmeT110I CYCGRG 6 cut(s) 557, 571, 1421, 2021, 2812, 3894
BmgT120I GGNCC 3 cut(s) 687, 952, 3727
BmrFI CCNGG 5 cut(s) 1037, 1814, 3731, 3895, 3896
BmrI ACTGGG 1 cut(s) 26
BmsI GCATC 9 cut(s) 573, 1849, 1954, 2131, 2549, 3355, 3415, 3835, 4083
BmtI GCTAGC 1 cut(s) 3116
BmuI ACTGGG 1 cut(s) 26
BpiI GAAGAC 3 cut(s) 272, 993, 2640
BplI GAGNNNNNCTC 6 cut(s) 1754, 1786, 2795, 2827, 3982, 4014
BpmI CTGGAG 3 cut(s) 614, 1019, 1904
Bpu10I CCTNAGC 3 cut(s) 447, 1095, 3459
Bpu1102I GCTNAGC 1 cut(s) 840
Bpu14I TTCGAA 1 cut(s) 3444
BpuMI CCSGG 2 cut(s) 3895, 3896
BsaJI CCNNGG 6 cut(s) 690, 883, 942, 3117, 3894, 4069
BsaXI ACNNNNNCTCC 2 cut(s) 1145, 1175
Bsc4I CCNNNNNNNGG 6 cut(s) 37, 961, 1042, 2391, 2392, 2959
Bse118I RCCGGY 1 cut(s) 1862
Bse1I ACTGG 8 cut(s) 32, 1219, 1711, 2319, 2562, 2764, 2949, 3006
Bse3DI GCAATG 1 cut(s) 488
BseBI CCWGG 3 cut(s) 1037, 1814, 3731
BseDI CCNNGG 6 cut(s) 690, 883, 942, 3117, 3894, 4069
BseGI GGATG 9 cut(s) 10, 127, 588, 1864, 1969, 3217, 3325, 3977, 4065
BseLI CCNNNNNNNGG 6 cut(s) 37, 961, 1042, 2391, 2392, 2959
BseMI GCAATG 1 cut(s) 488
BseNI ACTGG 8 cut(s) 32, 1219, 1711, 2319, 2562, 2764, 2949, 3006
BseRI GAGGAG 9 cut(s) 413, 464, 653, 875, 1292, 1376, 2321, 2807, 3435
BseYI CCCAGC 1 cut(s) 3384
BsgI GTGCAG 4 cut(s) 629, 647, 1264, 1371
Bsh1236I CGCG 2 cut(s) 259, 944
BshFI GGCC 1 cut(s) 689
BsiHKAI GWGCWC 4 cut(s) 564, 1368, 1422, 2786
BsiHKCI CYCGRG 6 cut(s) 557, 571, 1421, 2021, 2812, 3894
BsiSI CCGG 2 cut(s) 1863, 3895
BslFI GGGAC 4 cut(s) 209, 865, 2692, 3911
BslI CCNNNNNNNGG 6 cut(s) 37, 961, 1042, 2391, 2392, 2959
BsmAI GTCTC 8 cut(s) 50, 75, 671, 978, 1845, 2396, 3495, 3762
BsmFI GGGAC 4 cut(s) 209, 865, 2692, 3911
BsmI GAATGC 2 cut(s) 2027, 2850
BsnI GGCC 1 cut(s) 689
BsoBI CYCGRG 6 cut(s) 557, 571, 1421, 2021, 2812, 3894
Bsp119I TTCGAA 1 cut(s) 3444
Bsp1286I GDGCHC 4 cut(s) 564, 1368, 1422, 2786
Bsp1407I TGTACA 2 cut(s) 1147, 1222
Bsp1720I GCTNAGC 1 cut(s) 840
BspACI CCGC 9 cut(s) 188, 259, 942, 944, 1544, 2177, 2303, 3690, 3713
BspANI GGCC 1 cut(s) 689
BspFNI CGCG 2 cut(s) 259, 944
BspMAI CTGCAG 6 cut(s) 609, 853, 1080, 1450, 2067, 3405
BspMI ACCTGC 1 cut(s) 3339
BspOI GCTAGC 1 cut(s) 3116
BspPI GGATC 4 cut(s) 525, 1825, 3615, 3913
BspQI GCTCTTC 2 cut(s) 738, 2502
BspT104I TTCGAA 1 cut(s) 3444
BspTI CTTAAG 2 cut(s) 773, 2252
BsrDI GCAATG 1 cut(s) 488
BsrFI RCCGGY 1 cut(s) 1862
BsrGI TGTACA 2 cut(s) 1147, 1222
BsrI ACTGG 8 cut(s) 32, 1219, 1711, 2319, 2562, 2764, 2949, 3006
BssAI RCCGGY 1 cut(s) 1862
BssECI CCNNGG 6 cut(s) 690, 883, 942, 3117, 3894, 4069
BssT1I CCWWGG 3 cut(s) 690, 883, 4069
Bst2UI CCWGG 3 cut(s) 1037, 1814, 3731
Bst4CI ACNGT 5 cut(s) 2619, 2670, 3061, 3220, 3513
Bst6I CTCTTC 8 cut(s) 111, 738, 2115, 2502, 2964, 3018, 3249, 3929
BstAFI CTTAAG 2 cut(s) 773, 2252
BstAPI GCANNNNNTGC 2 cut(s) 604, 1613
BstAUI TGTACA 2 cut(s) 1147, 1222
BstBI TTCGAA 1 cut(s) 3444
BstC8I GCNNGC 4 cut(s) 495, 666, 2848, 3114
BstDSI CCRYGG 1 cut(s) 942
BstENI CCTNNNNNAGG 1 cut(s) 959
BstF5I GGATG 9 cut(s) 10, 127, 588, 1864, 1969, 3217, 3325, 3977, 4065
BstFNI CGCG 2 cut(s) 259, 944
BstH2I RGCGCY 1 cut(s) 1095
BstHHI GCGC 2 cut(s) 259, 1094
BstMAI GTCTC 8 cut(s) 50, 75, 671, 978, 1845, 2396, 3495, 3762
BstNI CCWGG 3 cut(s) 1037, 1814, 3731
BstNSI RCATGY 1 cut(s) 1394
BstSCI CCNGG 5 cut(s) 1035, 1812, 3729, 3893, 3894
BstSFI CTRYAG 9 cut(s) 605, 615, 849, 1076, 1164, 1446, 2063, 3249, 3401
BstUI CGCG 2 cut(s) 259, 944
BstV2I GAAGAC 3 cut(s) 272, 993, 2640
BstX2I RGATCY 3 cut(s) 517, 1030, 2920
BstYI RGATCY 3 cut(s) 517, 1030, 2920
BsuRI GGCC 1 cut(s) 689
BtgI CCRYGG 1 cut(s) 942
BtgZI GCGATG 1 cut(s) 3184
BtsCI GGATG 9 cut(s) 10, 127, 588, 1864, 1969, 3217, 3325, 3977, 4065
BtsI GCAGTG 5 cut(s) 1194, 1252, 1611, 2060, 4002
BveI ACCTGC 1 cut(s) 3339
Cac8I GCNNGC 4 cut(s) 495, 666, 2848, 3114
CaiI CAGNNNCTG 2 cut(s) 592, 1385
CfoI GCGC 2 cut(s) 259, 1094
Cfr10I RCCGGY 1 cut(s) 1862
Cfr13I GGNCC 3 cut(s) 687, 952, 3727
Cfr42I CCGCGG 1 cut(s) 945
Cfr9I CCCGGG 1 cut(s) 3894
Csp6I GTAC 6 cut(s) 457, 1148, 1223, 1987, 2595, 3354
CspCI CAANNNNNGTGG 2 cut(s) 637, 672
CviAII CATG 5 cut(s) 1391, 1778, 2378, 3611, 3626
CviQI GTAC 6 cut(s) 457, 1148, 1223, 1987, 2595, 3354
DraI TTTAAA 1 cut(s) 3432
DriI GACNNNNNGTC 1 cut(s) 202
Eam1104I CTCTTC 8 cut(s) 111, 738, 2115, 2502, 2964, 3018, 3249, 3929
Eam1105I GACNNNNNGTC 1 cut(s) 202
EarI CTCTTC 8 cut(s) 111, 738, 2115, 2502, 2964, 3018, 3249, 3929
EciI GGCGGA 2 cut(s) 203, 2318
Ecl136II GAGCTC 3 cut(s) 562, 1366, 1420
Eco130I CCWWGG 3 cut(s) 690, 883, 4069
Eco24I GRGCYC 3 cut(s) 564, 1368, 1422
Eco32I GATATC 4 cut(s) 28, 3306, 3381, 3871
Eco47I GGWCC 2 cut(s) 952, 3727
Eco47III AGCGCT 1 cut(s) 1093
Eco53kI GAGCTC 3 cut(s) 562, 1366, 1420
Eco88I CYCGRG 6 cut(s) 557, 571, 1421, 2021, 2812, 3894
EcoICRI GAGCTC 3 cut(s) 562, 1366, 1420
EcoNI CCTNNNNNAGG 1 cut(s) 959
EcoO109I RGGNCCY 2 cut(s) 687, 3727
EcoRI GAATTC 2 cut(s) 331, 1914
EcoRII CCWGG 3 cut(s) 1035, 1812, 3729
EcoRV GATATC 4 cut(s) 28, 3306, 3381, 3871
EcoT14I CCWWGG 3 cut(s) 690, 883, 4069
EcoT38I GRGCYC 3 cut(s) 564, 1368, 1422
ErhI CCWWGG 3 cut(s) 690, 883, 4069
FaeI CATG 5 cut(s) 1394, 1781, 2381, 3614, 3629
FaqI GGGAC 4 cut(s) 209, 865, 2692, 3911
FatI CATG 5 cut(s) 1390, 1777, 2377, 3610, 3625
FauI CCCGC 1 cut(s) 252
FblI GTMKAC 1 cut(s) 891
FokI GGATG 9 cut(s) 17, 134, 595, 1871, 1976, 3224, 3332, 3964, 4052
FriOI GRGCYC 3 cut(s) 564, 1368, 1422
GlaI GCGC 2 cut(s) 258, 1093
GsaI CCCAGC 1 cut(s) 3388
GsuI CTGGAG 3 cut(s) 614, 1019, 1904
HaeII RGCGCY 1 cut(s) 1095
HaeIII GGCC 1 cut(s) 689
HapII CCGG 2 cut(s) 1863, 3895
HhaI GCGC 2 cut(s) 259, 1094
Hin1II CATG 5 cut(s) 1394, 1781, 2381, 3614, 3629
Hin6I GCGC 2 cut(s) 257, 1092
HinP1I GCGC 2 cut(s) 257, 1092
HincII GTYRAC 4 cut(s) 2094, 2799, 3261, 3591
HindII GTYRAC 4 cut(s) 2094, 2799, 3261, 3591
HindIII AAGCTT 2 cut(s) 1314, 3131
HpaI GTTAAC 2 cut(s) 2799, 3261
HpaII CCGG 2 cut(s) 1863, 3895
HphI GGTGA 8 cut(s) 284, 541, 632, 2245, 2288, 2506, 3529, 3878
Hpy166II GTNNAC 7 cut(s) 275, 892, 935, 2094, 2799, 3261, 3591
Hpy8I GTNNAC 7 cut(s) 275, 892, 935, 2094, 2799, 3261, 3591
HpyCH4III ACNGT 5 cut(s) 2619, 2670, 3061, 3220, 3513
Hsp92II CATG 5 cut(s) 1394, 1781, 2381, 3614, 3629
HspAI GCGC 2 cut(s) 257, 1092
KspAI GTTAAC 2 cut(s) 2799, 3261
KspI CCGCGG 1 cut(s) 945
LguI GCTCTTC 2 cut(s) 738, 2502
LweI GCATC 9 cut(s) 573, 1849, 1954, 2131, 2549, 3355, 3415, 3835, 4083
MaeIII GTNAC 6 cut(s) 246, 413, 1168, 1890, 3480, 3790
MfeI CAATTG 1 cut(s) 1745
MflI RGATCY 3 cut(s) 517, 1030, 2920
MhlI GDGCHC 4 cut(s) 564, 1368, 1422, 2786
MlyI GAGTC 5 cut(s) 332, 680, 980, 2993, 3167
MmeI TCCRAC 1 cut(s) 1035
MroXI GAANNNNTTC 3 cut(s) 822, 3228, 3651
MspA1I CMGCKG 5 cut(s) 944, 1199, 1228, 1693, 3692
MspCI CTTAAG 2 cut(s) 773, 2252
MspI CCGG 2 cut(s) 1863, 3895
MspR9I CCNGG 5 cut(s) 1037, 1814, 3731, 3895, 3896
MunI CAATTG 1 cut(s) 1745
Mva1269I GAATGC 2 cut(s) 2027, 2850
MvaI CCWGG 3 cut(s) 1037, 1814, 3731
MvnI CGCG 2 cut(s) 259, 944
NciI CCSGG 2 cut(s) 3895, 3896
NheI GCTAGC 1 cut(s) 3112
NlaIII CATG 5 cut(s) 1394, 1781, 2381, 3614, 3629
NmeAIII GCCGAG 2 cut(s) 694, 3142
NmuCI GTSAC 2 cut(s) 413, 3790
NspI RCATGY 1 cut(s) 1394
NspV TTCGAA 1 cut(s) 3444
PaeR7I CTCGAG 5 cut(s) 557, 571, 1421, 2021, 2812
PciSI GCTCTTC 2 cut(s) 738, 2502
PctI GAATGC 2 cut(s) 2027, 2850
PdmI GAANNNNTTC 3 cut(s) 822, 3228, 3651
PleI GAGTC 5 cut(s) 331, 679, 979, 2992, 3166
PpsI GAGTC 5 cut(s) 331, 679, 979, 2992, 3166
PpuMI RGGWCCY 1 cut(s) 3727
PsiI TTATAA 1 cut(s) 929
Psp124BI GAGCTC 3 cut(s) 564, 1368, 1422
Psp5II RGGWCCY 1 cut(s) 3727
Psp6I CCWGG 3 cut(s) 1035, 1812, 3729
PspFI CCCAGC 1 cut(s) 3384
PspGI CCWGG 3 cut(s) 1035, 1812, 3729
PspPI GGNCC 3 cut(s) 687, 952, 3727
PspPPI RGGWCCY 1 cut(s) 3727
PspXI VCTCGAGB 3 cut(s) 557, 1421, 2021
PstI CTGCAG 6 cut(s) 609, 853, 1080, 1450, 2067, 3405
PstNI CAGNNNCTG 2 cut(s) 592, 1385
PsuI RGATCY 3 cut(s) 517, 1030, 2920
PvuII CAGCTG 3 cut(s) 1199, 1228, 1693
RsaI GTAC 6 cut(s) 458, 1149, 1224, 1988, 2596, 3355
RsaNI GTAC 6 cut(s) 457, 1148, 1223, 1987, 2595, 3354
SacI GAGCTC 3 cut(s) 564, 1368, 1422
SacII CCGCGG 1 cut(s) 945
SapI GCTCTTC 2 cut(s) 738, 2502
Sau96I GGNCC 3 cut(s) 687, 952, 3727
ScaI AGTACT 1 cut(s) 1988
SchI GAGTC 5 cut(s) 332, 680, 980, 2993, 3167
ScrFI CCNGG 5 cut(s) 1037, 1814, 3731, 3895, 3896
SduI GDGCHC 4 cut(s) 564, 1368, 1422, 2786
SfaNI GCATC 9 cut(s) 573, 1849, 1954, 2131, 2549, 3355, 3415, 3835, 4083
SfcI CTRYAG 9 cut(s) 605, 615, 849, 1076, 1164, 1446, 2063, 3249, 3401
Sfr274I CTCGAG 5 cut(s) 557, 571, 1421, 2021, 2812
Sfr303I CCGCGG 1 cut(s) 945
SfuI TTCGAA 1 cut(s) 3444
SgrBI CCGCGG 1 cut(s) 945
SinI GGWCC 2 cut(s) 952, 3727
SlaI CTCGAG 5 cut(s) 557, 571, 1421, 2021, 2812
SmaI CCCGGG 1 cut(s) 3896
SsiI CCGC 9 cut(s) 188, 259, 942, 944, 1544, 2177, 2303, 3690, 3713
SspI AATATT 1 cut(s) 1414
SstI GAGCTC 3 cut(s) 564, 1368, 1422
StyD4I CCNGG 5 cut(s) 1035, 1812, 3729, 3893, 3894
StyI CCWWGG 3 cut(s) 690, 883, 4069
TaaI ACNGT 5 cut(s) 2619, 2670, 3061, 3220, 3513
TatI WGTACW 5 cut(s) 456, 1147, 1222, 1986, 2594
TseFI GTSAC 2 cut(s) 413, 3790
Tsp45I GTSAC 2 cut(s) 413, 3790
TspMI CCCGGG 1 cut(s) 3894
Vha464I CTTAAG 2 cut(s) 773, 2252
VpaK11BI GGWCC 2 cut(s) 952, 3727
XagI CCTNNNNNAGG 1 cut(s) 959
XapI RAATTY 4 cut(s) 331, 1282, 1586, 1914
XbaI TCTAGA 2 cut(s) 3175, 3799
XceI RCATGY 1 cut(s) 1394
XhoI CTCGAG 5 cut(s) 557, 571, 1421, 2021, 2812
XmaI CCCGGG 1 cut(s) 3894
XmiI GTMKAC 1 cut(s) 891
XmnI GAANNNNTTC 3 cut(s) 822, 3228, 3651
ZrmI AGTACT 1 cut(s) 1988
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.