protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 189 |
| AcuI | CTGAAG | 3 cut(s) | 39, 261, 294 |
| AfaI | GTAC | 2 cut(s) | 151, 223 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 494 |
| AgsI | TTSAA | 1 cut(s) | 595 |
| AjnI | CCWGG | 2 cut(s) | 205, 493 |
| AluBI | AGCT | 2 cut(s) | 71, 275 |
| AluI | AGCT | 2 cut(s) | 71, 275 |
| Alw26I | GTCTC | 1 cut(s) | 35 |
| AoxI | GGCC | 1 cut(s) | 448 |
| ApeKI | GCWGC | 2 cut(s) | 32, 191 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 52, 81, 475 |
| AspS9I | GGNCC | 1 cut(s) | 581 |
| AsuC2I | CCSGG | 1 cut(s) | 585 |
| AvaII | GGWCC | 1 cut(s) | 581 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 205, 237 |
| BauI | CACGAG | 1 cut(s) | 72 |
| BbvI | GCAGC | 2 cut(s) | 44, 203 |
| BccI | CCATC | 2 cut(s) | 100, 185 |
| BciT130I | CCWGG | 2 cut(s) | 207, 495 |
| BciVI | GTATCC | 1 cut(s) | 524 |
| BcnI | CCSGG | 1 cut(s) | 585 |
| BcoDI | GTCTC | 1 cut(s) | 35 |
| BfaI | CTAG | 2 cut(s) | 29, 510 |
| BfuI | GTATCC | 1 cut(s) | 524 |
| BisI | GCNGC | 3 cut(s) | 33, 189, 192 |
| BlsI | GCNGC | 3 cut(s) | 34, 190, 193 |
| Bme1390I | CCNGG | 3 cut(s) | 207, 495, 585 |
| Bme18I | GGWCC | 1 cut(s) | 581 |
| BmgT120I | GGNCC | 1 cut(s) | 581 |
| BmiI | GGNNCC | 1 cut(s) | 486 |
| BmrFI | CCNGG | 3 cut(s) | 207, 495, 585 |
| BmrI | ACTGGG | 1 cut(s) | 512 |
| BmsI | GCATC | 1 cut(s) | 507 |
| BmuI | ACTGGG | 1 cut(s) | 512 |
| BpuMI | CCSGG | 1 cut(s) | 585 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 494 |
| Bse1I | ACTGG | 1 cut(s) | 518 |
| BseBI | CCWGG | 2 cut(s) | 207, 495 |
| BseGI | GGATG | 1 cut(s) | 543 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 494 |
| BseNI | ACTGG | 1 cut(s) | 518 |
| BseXI | GCAGC | 2 cut(s) | 44, 203 |
| BsgI | GTGCAG | 1 cut(s) | 578 |
| BshFI | GGCC | 1 cut(s) | 450 |
| BsiSI | CCGG | 1 cut(s) | 584 |
| BslFI | GGGAC | 1 cut(s) | 148 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 494 |
| BsmAI | GTCTC | 1 cut(s) | 35 |
| BsmFI | GGGAC | 1 cut(s) | 148 |
| BsmI | GAATGC | 1 cut(s) | 194 |
| BsnI | GGCC | 1 cut(s) | 450 |
| Bsp1407I | TGTACA | 1 cut(s) | 149 |
| Bsp143I | GATC | 1 cut(s) | 432 |
| BspACI | CCGC | 1 cut(s) | 189 |
| BspANI | GGCC | 1 cut(s) | 450 |
| BspHI | TCATGA | 1 cut(s) | 94 |
| BspLI | GGNNCC | 1 cut(s) | 486 |
| BsrGI | TGTACA | 1 cut(s) | 149 |
| BsrI | ACTGG | 1 cut(s) | 518 |
| BssMI | GATC | 1 cut(s) | 432 |
| BssSI | CACGAG | 1 cut(s) | 72 |
| Bst2BI | CACGAG | 1 cut(s) | 72 |
| Bst2UI | CCWGG | 2 cut(s) | 207, 495 |
| Bst4CI | ACNGT | 1 cut(s) | 154 |
| Bst6I | CTCTTC | 1 cut(s) | 348 |
| BstAUI | TGTACA | 1 cut(s) | 149 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 492 |
| BstF5I | GGATG | 1 cut(s) | 543 |
| BstKTI | GATC | 1 cut(s) | 435 |
| BstMAI | GTCTC | 1 cut(s) | 35 |
| BstMBI | GATC | 1 cut(s) | 432 |
| BstNI | CCWGG | 2 cut(s) | 207, 495 |
| BstSCI | CCNGG | 3 cut(s) | 205, 493, 583 |
| BstV1I | GCAGC | 2 cut(s) | 44, 203 |
| BsuI | GTATCC | 1 cut(s) | 524 |
| BsuRI | GGCC | 1 cut(s) | 450 |
| BtgZI | GCGATG | 1 cut(s) | 397 |
| BtsCI | GGATG | 1 cut(s) | 543 |
| BtsIMutI | CAGTG | 1 cut(s) | 525 |
| CciI | TCATGA | 1 cut(s) | 94 |
| Cfr13I | GGNCC | 1 cut(s) | 581 |
| Csp6I | GTAC | 2 cut(s) | 150, 222 |
| CviAII | CATG | 7 cut(s) | 38, 95, 181, 238, 427, 467, 480 |
| CviJI | RGCY | 4 cut(s) | 71, 231, 275, 450 |
| CviKI_1 | RGCY | 4 cut(s) | 71, 231, 275, 450 |
| CviQI | GTAC | 2 cut(s) | 150, 222 |
| DpnI | GATC | 1 cut(s) | 434 |
| DpnII | GATC | 1 cut(s) | 432 |
| Eam1104I | CTCTTC | 1 cut(s) | 348 |
| EarI | CTCTTC | 1 cut(s) | 348 |
| Eco47I | GGWCC | 1 cut(s) | 581 |
| Eco57I | CTGAAG | 3 cut(s) | 39, 261, 294 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 492 |
| EcoRII | CCWGG | 2 cut(s) | 205, 493 |
| FaeI | CATG | 7 cut(s) | 41, 98, 184, 241, 430, 470, 483 |
| FaqI | GGGAC | 1 cut(s) | 148 |
| FatI | CATG | 7 cut(s) | 37, 94, 180, 237, 426, 466, 479 |
| Fnu4HI | GCNGC | 3 cut(s) | 33, 189, 192 |
| FokI | GGATG | 1 cut(s) | 550 |
| Fsp4HI | GCNGC | 3 cut(s) | 33, 189, 192 |
| FspBI | CTAG | 2 cut(s) | 29, 510 |
| GluI | GCNGC | 3 cut(s) | 33, 189, 192 |
| HaeIII | GGCC | 1 cut(s) | 450 |
| HapII | CCGG | 1 cut(s) | 584 |
| Hin1II | CATG | 7 cut(s) | 41, 98, 184, 241, 430, 470, 483 |
| HinfI | GANTC | 3 cut(s) | 43, 91, 330 |
| HpaII | CCGG | 1 cut(s) | 584 |
| Hpy166II | GTNNAC | 1 cut(s) | 77 |
| Hpy188I | TCNGA | 2 cut(s) | 58, 280 |
| Hpy188III | TCNNGA | 3 cut(s) | 13, 74, 95 |
| Hpy8I | GTNNAC | 1 cut(s) | 77 |
| HpyCH4III | ACNGT | 1 cut(s) | 154 |
| HpyCH4IV | ACGT | 1 cut(s) | 343 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 350, 559 |
| HpySE526I | ACGT | 1 cut(s) | 343 |
| Hsp92II | CATG | 7 cut(s) | 41, 98, 184, 241, 430, 470, 483 |
| Kzo9I | GATC | 1 cut(s) | 432 |
| LpnPI | CCDG | 8 cut(s) | 192, 213, 219, 480, 507, 531, 583, 597 |
| Lsp1109I | GCAGC | 2 cut(s) | 44, 203 |
| LweI | GCATC | 1 cut(s) | 507 |
| MaeI | CTAG | 2 cut(s) | 29, 510 |
| MaeII | ACGT | 1 cut(s) | 343 |
| MaeIII | GTNAC | 2 cut(s) | 172, 520 |
| MalI | GATC | 1 cut(s) | 434 |
| MboI | GATC | 1 cut(s) | 432 |
| MboII | GAAGA | 1 cut(s) | 365 |
| MluCI | AATT | 2 cut(s) | 101, 201 |
| MlyI | GAGTC | 1 cut(s) | 37 |
| MnlI | CCTC | 8 cut(s) | 36, 106, 302, 344, 349, 374, 535, 560 |
| MroXI | GAANNNNTTC | 3 cut(s) | 52, 81, 475 |
| MseI | TTAA | 1 cut(s) | 401 |
| MslI | CAYNNNNRTG | 3 cut(s) | 383, 428, 532 |
| MspI | CCGG | 1 cut(s) | 584 |
| MspR9I | CCNGG | 3 cut(s) | 207, 495, 585 |
| Mva1269I | GAATGC | 1 cut(s) | 194 |
| MvaI | CCWGG | 2 cut(s) | 207, 495 |
| NciI | CCSGG | 1 cut(s) | 585 |
| NdeII | GATC | 1 cut(s) | 432 |
| NlaIII | CATG | 7 cut(s) | 41, 98, 184, 241, 430, 470, 483 |
| NlaIV | GGNNCC | 1 cut(s) | 486 |
| NmuCI | GTSAC | 1 cut(s) | 520 |
| PagI | TCATGA | 1 cut(s) | 94 |
| PctI | GAATGC | 1 cut(s) | 194 |
| PdmI | GAANNNNTTC | 3 cut(s) | 52, 81, 475 |
| PfeI | GAWTC | 2 cut(s) | 91, 330 |
| PkrI | GCNGC | 3 cut(s) | 34, 190, 193 |
| PleI | GAGTC | 1 cut(s) | 37 |
| PpsI | GAGTC | 1 cut(s) | 37 |
| Psp6I | CCWGG | 2 cut(s) | 205, 493 |
| PspGI | CCWGG | 2 cut(s) | 205, 493 |
| PspN4I | GGNNCC | 1 cut(s) | 486 |
| PspPI | GGNCC | 1 cut(s) | 581 |
| RsaI | GTAC | 2 cut(s) | 151, 223 |
| RsaNI | GTAC | 2 cut(s) | 150, 222 |
| RseI | CAYNNNNRTG | 3 cut(s) | 383, 428, 532 |
| SaqAI | TTAA | 1 cut(s) | 401 |
| SatI | GCNGC | 3 cut(s) | 33, 189, 192 |
| Sau3AI | GATC | 1 cut(s) | 432 |
| Sau96I | GGNCC | 1 cut(s) | 581 |
| SchI | GAGTC | 1 cut(s) | 37 |
| ScrFI | CCNGG | 3 cut(s) | 207, 495, 585 |
| SetI | ASST | 7 cut(s) | 12, 73, 163, 277, 346, 397, 527 |
| SfaNI | GCATC | 1 cut(s) | 507 |
| SinI | GGWCC | 1 cut(s) | 581 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 383, 428, 532 |
| Sse9I | AATT | 2 cut(s) | 101, 201 |
| SsiI | CCGC | 1 cut(s) | 189 |
| SspI | AATATT | 2 cut(s) | 476, 591 |
| SspMI | CTAG | 2 cut(s) | 29, 510 |
| StyD4I | CCNGG | 3 cut(s) | 205, 493, 583 |
| TaaI | ACNGT | 1 cut(s) | 154 |
| TaiI | ACGT | 1 cut(s) | 346 |
| TaqI | TCGA | 2 cut(s) | 12, 46 |
| TasI | AATT | 2 cut(s) | 101, 201 |
| TatI | WGTACW | 1 cut(s) | 149 |
| TauI | GCSGC | 1 cut(s) | 191 |
| TfiI | GAWTC | 2 cut(s) | 91, 330 |
| Tru1I | TTAA | 1 cut(s) | 401 |
| Tru9I | TTAA | 1 cut(s) | 401 |
| TscAI | CASTG | 1 cut(s) | 525 |
| TseFI | GTSAC | 1 cut(s) | 520 |
| TseI | GCWGC | 2 cut(s) | 32, 191 |
| Tsp45I | GTSAC | 1 cut(s) | 520 |
| TspDTI | ATGAA | 7 cut(s) | 74, 143, 232, 400, 455, 468, 556 |
| TspRI | CASTG | 1 cut(s) | 525 |
| VpaK11BI | GGWCC | 1 cut(s) | 581 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 492 |
| XmnI | GAANNNNTTC | 3 cut(s) | 52, 81, 475 |
| XspI | CTAG | 2 cut(s) | 29, 510 |