protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ank_2 | PF12796 | 115 - 200 | 1.1e-07 | Ankyrin repeats (3 copies) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 260 |
| AccI | GTMKAC | 1 cut(s) | 504 |
| AciI | CCGC | 2 cut(s) | 123, 323 |
| AclWI | GGATC | 3 cut(s) | 617, 738, 770 |
| AcsI | RAATTY | 3 cut(s) | 65, 210, 395 |
| AcuI | CTGAAG | 1 cut(s) | 27 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 342, 343, 442 |
| AflII | CTTAAG | 1 cut(s) | 719 |
| AgeI | ACCGGT | 1 cut(s) | 452 |
| AgsI | TTSAA | 3 cut(s) | 199, 442, 713 |
| AjnI | CCWGG | 2 cut(s) | 173, 376 |
| AluBI | AGCT | 6 cut(s) | 107, 350, 361, 419, 718, 742 |
| AluI | AGCT | 6 cut(s) | 107, 350, 361, 419, 718, 742 |
| Alw26I | GTCTC | 1 cut(s) | 224 |
| AlwI | GGATC | 3 cut(s) | 617, 738, 770 |
| AoxI | GGCC | 1 cut(s) | 333 |
| ApoI | RAATTY | 3 cut(s) | 65, 210, 395 |
| AseI | ATTAAT | 1 cut(s) | 87 |
| AsiGI | ACCGGT | 1 cut(s) | 452 |
| AspS9I | GGNCC | 1 cut(s) | 334 |
| AsuC2I | CCSGG | 1 cut(s) | 337 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 543, 576 |
| BbsI | GAAGAC | 1 cut(s) | 63 |
| BccI | CCATC | 4 cut(s) | 23, 154, 506, 646 |
| BciT130I | CCWGG | 2 cut(s) | 175, 378 |
| BciVI | GTATCC | 1 cut(s) | 544 |
| BcnI | CCSGG | 1 cut(s) | 337 |
| BcoDI | GTCTC | 1 cut(s) | 224 |
| BfaI | CTAG | 1 cut(s) | 542 |
| BfrI | CTTAAG | 1 cut(s) | 719 |
| BfuI | GTATCC | 1 cut(s) | 544 |
| Bme1390I | CCNGG | 3 cut(s) | 175, 337, 378 |
| BmgT120I | GGNCC | 1 cut(s) | 334 |
| BmrFI | CCNGG | 3 cut(s) | 175, 337, 378 |
| BmsI | GCATC | 2 cut(s) | 121, 160 |
| BpiI | GAAGAC | 1 cut(s) | 63 |
| BpmI | CTGGAG | 1 cut(s) | 207 |
| BpuMI | CCSGG | 1 cut(s) | 337 |
| BsaJI | CCNNGG | 1 cut(s) | 377 |
| BsaWI | WCCGGW | 1 cut(s) | 452 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 342, 343, 442 |
| Bse118I | RCCGGY | 1 cut(s) | 452 |
| Bse1I | ACTGG | 1 cut(s) | 436 |
| BseBI | CCWGG | 2 cut(s) | 175, 378 |
| BseDI | CCNNGG | 1 cut(s) | 377 |
| BseGI | GGATG | 1 cut(s) | 25 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 342, 343, 442 |
| BseMII | CTCAG | 1 cut(s) | 126 |
| BseNI | ACTGG | 1 cut(s) | 436 |
| BseRI | GAGGAG | 1 cut(s) | 513 |
| BshFI | GGCC | 1 cut(s) | 335 |
| BshTI | ACCGGT | 1 cut(s) | 452 |
| BsiSI | CCGG | 2 cut(s) | 337, 453 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 342, 343, 442 |
| BsmAI | GTCTC | 1 cut(s) | 224 |
| BsmBI | CGTCTC | 1 cut(s) | 224 |
| BsnI | GGCC | 1 cut(s) | 335 |
| Bsp143I | GATC | 3 cut(s) | 622, 730, 775 |
| BspACI | CCGC | 2 cut(s) | 123, 323 |
| BspANI | GGCC | 1 cut(s) | 335 |
| BspCNI | CTCAG | 1 cut(s) | 127 |
| BspPI | GGATC | 3 cut(s) | 617, 738, 770 |
| BspQI | GCTCTTC | 1 cut(s) | 426 |
| BspTI | CTTAAG | 1 cut(s) | 719 |
| BsrFI | RCCGGY | 1 cut(s) | 452 |
| BsrI | ACTGG | 1 cut(s) | 436 |
| BssAI | RCCGGY | 1 cut(s) | 452 |
| BssECI | CCNNGG | 1 cut(s) | 377 |
| BssMI | GATC | 3 cut(s) | 622, 730, 775 |
| Bst2UI | CCWGG | 2 cut(s) | 175, 378 |
| Bst4CI | ACNGT | 4 cut(s) | 195, 268, 474, 509 |
| Bst6I | CTCTTC | 2 cut(s) | 222, 426 |
| BstAFI | CTTAAG | 1 cut(s) | 719 |
| BstC8I | GCNNGC | 1 cut(s) | 105 |
| BstDEI | CTNAG | 3 cut(s) | 135, 493, 576 |
| BstF5I | GGATG | 1 cut(s) | 25 |
| BstKTI | GATC | 3 cut(s) | 625, 733, 778 |
| BstMAI | GTCTC | 1 cut(s) | 224 |
| BstMBI | GATC | 3 cut(s) | 622, 730, 775 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 104, 170, 389 |
| BstNI | CCWGG | 2 cut(s) | 175, 378 |
| BstSCI | CCNGG | 3 cut(s) | 173, 335, 376 |
| BstV2I | GAAGAC | 1 cut(s) | 63 |
| BstX2I | RGATCY | 1 cut(s) | 775 |
| BstYI | RGATCY | 1 cut(s) | 775 |
| BsuI | GTATCC | 1 cut(s) | 544 |
| BsuRI | GGCC | 1 cut(s) | 335 |
| BtsCI | GGATG | 1 cut(s) | 25 |
| Cac8I | GCNNGC | 1 cut(s) | 105 |
| Cfr10I | RCCGGY | 1 cut(s) | 452 |
| Cfr13I | GGNCC | 1 cut(s) | 334 |
| CseI | GACGC | 1 cut(s) | 241 |
| CspAI | ACCGGT | 1 cut(s) | 452 |
| CviAII | CATG | 3 cut(s) | 70, 236, 583 |
| DdeI | CTNAG | 3 cut(s) | 135, 493, 576 |
| DpnI | GATC | 3 cut(s) | 624, 732, 777 |
| DpnII | GATC | 3 cut(s) | 622, 730, 775 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 260 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 260 |
| Eam1104I | CTCTTC | 2 cut(s) | 222, 426 |
| EarI | CTCTTC | 2 cut(s) | 222, 426 |
| Eco57I | CTGAAG | 1 cut(s) | 27 |
| EcoRI | GAATTC | 1 cut(s) | 65 |
| EcoRII | CCWGG | 2 cut(s) | 173, 376 |
| Esp3I | CGTCTC | 1 cut(s) | 224 |
| FaeI | CATG | 3 cut(s) | 73, 239, 586 |
| FatI | CATG | 3 cut(s) | 69, 235, 582 |
| FauI | CCCGC | 2 cut(s) | 116, 316 |
| FblI | GTMKAC | 1 cut(s) | 504 |
| FokI | GGATG | 1 cut(s) | 32 |
| FspBI | CTAG | 1 cut(s) | 542 |
| GsuI | CTGGAG | 1 cut(s) | 207 |
| HaeIII | GGCC | 1 cut(s) | 335 |
| HapII | CCGG | 2 cut(s) | 337, 453 |
| HgaI | GACGC | 1 cut(s) | 241 |
| Hin1II | CATG | 3 cut(s) | 73, 239, 586 |
| HincII | GTYRAC | 1 cut(s) | 244 |
| HindII | GTYRAC | 1 cut(s) | 244 |
| HindIII | AAGCTT | 1 cut(s) | 716 |
| HinfI | GANTC | 3 cut(s) | 137, 245, 258 |
| HpaII | CCGG | 2 cut(s) | 337, 453 |
| Hpy166II | GTNNAC | 2 cut(s) | 244, 505 |
| Hpy188I | TCNGA | 1 cut(s) | 660 |
| Hpy188III | TCNNGA | 4 cut(s) | 157, 206, 224, 649 |
| Hpy8I | GTNNAC | 2 cut(s) | 244, 505 |
| HpyAV | CCTTC | 2 cut(s) | 620, 636 |
| HpyCH4III | ACNGT | 4 cut(s) | 195, 268, 474, 509 |
| HpyCH4IV | ACGT | 3 cut(s) | 313, 447, 662 |
| HpyCH4V | TGCA | 3 cut(s) | 103, 293, 582 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 104, 170, 389 |
| HpyF3I | CTNAG | 3 cut(s) | 135, 493, 576 |
| HpySE526I | ACGT | 3 cut(s) | 313, 447, 662 |
| Hsp92II | CATG | 3 cut(s) | 73, 239, 586 |
| Kzo9I | GATC | 3 cut(s) | 622, 730, 775 |
| LguI | GCTCTTC | 1 cut(s) | 426 |
| LmnI | GCTCC | 1 cut(s) | 358 |
| LweI | GCATC | 2 cut(s) | 121, 160 |
| MaeI | CTAG | 1 cut(s) | 542 |
| MaeII | ACGT | 3 cut(s) | 313, 447, 662 |
| MaeIII | GTNAC | 2 cut(s) | 262, 448 |
| MalI | GATC | 3 cut(s) | 624, 732, 777 |
| MboI | GATC | 3 cut(s) | 622, 730, 775 |
| MboII | GAAGA | 5 cut(s) | 68, 140, 239, 413, 604 |
| MflI | RGATCY | 1 cut(s) | 775 |
| MluCI | AATT | 7 cut(s) | 65, 84, 210, 340, 395, 464, 570 |
| MlyI | GAGTC | 3 cut(s) | 146, 239, 267 |
| MmeI | TCCRAC | 2 cut(s) | 280, 645 |
| MnlI | CCTC | 3 cut(s) | 54, 213, 534 |
| MseI | TTAA | 4 cut(s) | 87, 147, 270, 720 |
| MslI | CAYNNNNRTG | 1 cut(s) | 158 |
| MspCI | CTTAAG | 1 cut(s) | 719 |
| MspI | CCGG | 2 cut(s) | 337, 453 |
| MspR9I | CCNGG | 3 cut(s) | 175, 337, 378 |
| MvaI | CCWGG | 2 cut(s) | 175, 378 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 104, 170, 389 |
| NciI | CCSGG | 1 cut(s) | 337 |
| NdeII | GATC | 3 cut(s) | 622, 730, 775 |
| NlaIII | CATG | 3 cut(s) | 73, 239, 586 |
| NmeAIII | GCCGAG | 1 cut(s) | 763 |
| NmuCI | GTSAC | 1 cut(s) | 262 |
| PciSI | GCTCTTC | 1 cut(s) | 426 |
| PflFI | GACNNNGTC | 1 cut(s) | 257 |
| PinAI | ACCGGT | 1 cut(s) | 452 |
| PleI | GAGTC | 3 cut(s) | 145, 239, 266 |
| PpsI | GAGTC | 3 cut(s) | 145, 239, 266 |
| PshBI | ATTAAT | 1 cut(s) | 87 |
| Psp6I | CCWGG | 2 cut(s) | 173, 376 |
| PspGI | CCWGG | 2 cut(s) | 173, 376 |
| PspPI | GGNCC | 1 cut(s) | 334 |
| PsuI | RGATCY | 1 cut(s) | 775 |
| PsyI | GACNNNGTC | 1 cut(s) | 257 |
| RseI | CAYNNNNRTG | 1 cut(s) | 158 |
| SapI | GCTCTTC | 1 cut(s) | 426 |
| SaqAI | TTAA | 4 cut(s) | 87, 147, 270, 720 |
| Sau3AI | GATC | 3 cut(s) | 622, 730, 775 |
| Sau96I | GGNCC | 1 cut(s) | 334 |
| SchI | GAGTC | 3 cut(s) | 146, 239, 267 |
| ScrFI | CCNGG | 3 cut(s) | 175, 337, 378 |
| SfaNI | GCATC | 2 cut(s) | 121, 160 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 158 |
| SmlI | CTYRAG | 1 cut(s) | 719 |
| SmoI | CTYRAG | 1 cut(s) | 719 |
| Sse9I | AATT | 7 cut(s) | 65, 84, 210, 340, 395, 464, 570 |
| SsiI | CCGC | 2 cut(s) | 123, 323 |
| SspI | AATATT | 1 cut(s) | 181 |
| SspMI | CTAG | 1 cut(s) | 542 |
| StyD4I | CCNGG | 3 cut(s) | 173, 335, 376 |
| TaaI | ACNGT | 4 cut(s) | 195, 268, 474, 509 |
| TaiI | ACGT | 3 cut(s) | 316, 450, 665 |
| TaqI | TCGA | 4 cut(s) | 27, 248, 621, 733 |
| TaqII | GACCGA | 1 cut(s) | 581 |
| TasI | AATT | 7 cut(s) | 65, 84, 210, 340, 395, 464, 570 |
| Tru1I | TTAA | 4 cut(s) | 87, 147, 270, 720 |
| Tru9I | TTAA | 4 cut(s) | 87, 147, 270, 720 |
| TseFI | GTSAC | 1 cut(s) | 262 |
| Tsp45I | GTSAC | 1 cut(s) | 262 |
| TspDTI | ATGAA | 2 cut(s) | 58, 252 |
| TspGWI | ACGGA | 1 cut(s) | 270 |
| Tth111I | GACNNNGTC | 1 cut(s) | 257 |
| Vha464I | CTTAAG | 1 cut(s) | 719 |
| VspI | ATTAAT | 1 cut(s) | 87 |
| XapI | RAATTY | 3 cut(s) | 65, 210, 395 |
| XmiI | GTMKAC | 1 cut(s) | 504 |
| XspI | CTAG | 1 cut(s) | 542 |