protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 20 |
| AccII | CGCG | 1 cut(s) | 517 |
| AciI | CCGC | 2 cut(s) | 493, 510 |
| AclWI | GGATC | 2 cut(s) | 175, 188 |
| AcoI | YGGCCR | 1 cut(s) | 438 |
| AcyI | GRCGYC | 1 cut(s) | 385 |
| AfaI | GTAC | 1 cut(s) | 133 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 20 |
| AgsI | TTSAA | 1 cut(s) | 206 |
| AjnI | CCWGG | 1 cut(s) | 13 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 165, 197 |
| AluBI | AGCT | 2 cut(s) | 137, 359 |
| AluI | AGCT | 2 cut(s) | 137, 359 |
| Alw21I | GWGCWC | 1 cut(s) | 361 |
| Alw26I | GTCTC | 1 cut(s) | 308 |
| AlwI | GGATC | 2 cut(s) | 175, 188 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 20 |
| AoxI | GGCC | 3 cut(s) | 239, 350, 438 |
| ApeKI | GCWGC | 2 cut(s) | 44, 466 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 440, 472 |
| AseI | ATTAAT | 2 cut(s) | 369, 539 |
| AspLEI | GCGC | 1 cut(s) | 517 |
| AspS9I | GGNCC | 2 cut(s) | 240, 351 |
| AsuC2I | CCSGG | 2 cut(s) | 215, 354 |
| AsuHPI | GGTGA | 2 cut(s) | 29, 82 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 135, 168 |
| BalI | TGGCCA | 1 cut(s) | 440 |
| BamHI | GGATCC | 1 cut(s) | 180 |
| BanII | GRGCYC | 1 cut(s) | 361 |
| Bbv12I | GWGCWC | 1 cut(s) | 361 |
| BbvI | GCAGC | 2 cut(s) | 56, 478 |
| BceAI | ACGGC | 1 cut(s) | 136 |
| BciT130I | CCWGG | 1 cut(s) | 15 |
| BciVI | GTATCC | 1 cut(s) | 438 |
| BcnI | CCSGG | 2 cut(s) | 215, 354 |
| BcoDI | GTCTC | 1 cut(s) | 308 |
| BfaI | CTAG | 2 cut(s) | 140, 507 |
| BfuI | GTATCC | 1 cut(s) | 438 |
| BisI | GCNGC | 2 cut(s) | 45, 467 |
| BlsI | GCNGC | 2 cut(s) | 46, 468 |
| Bme1390I | CCNGG | 3 cut(s) | 15, 215, 354 |
| BmgT120I | GGNCC | 2 cut(s) | 240, 351 |
| BmiI | GGNNCC | 1 cut(s) | 182 |
| BmrFI | CCNGG | 3 cut(s) | 15, 215, 354 |
| BmsI | GCATC | 3 cut(s) | 14, 167, 498 |
| BpuMI | CCSGG | 2 cut(s) | 215, 354 |
| BsaHI | GRCGYC | 1 cut(s) | 385 |
| BsaJI | CCNNGG | 2 cut(s) | 431, 441 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 20 |
| Bse1I | ACTGG | 3 cut(s) | 25, 182, 257 |
| Bse3DI | GCAATG | 1 cut(s) | 130 |
| BseBI | CCWGG | 1 cut(s) | 15 |
| BseDI | CCNNGG | 2 cut(s) | 431, 441 |
| BseGI | GGATG | 2 cut(s) | 29, 489 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 20 |
| BseMI | GCAATG | 1 cut(s) | 130 |
| BseMII | CTCAG | 1 cut(s) | 326 |
| BseNI | ACTGG | 3 cut(s) | 25, 182, 257 |
| BseXI | GCAGC | 2 cut(s) | 56, 478 |
| Bsh1236I | CGCG | 1 cut(s) | 517 |
| BshFI | GGCC | 3 cut(s) | 241, 352, 440 |
| BsiHKAI | GWGCWC | 1 cut(s) | 361 |
| BsiSI | CCGG | 2 cut(s) | 214, 354 |
| BslFI | GGGAC | 1 cut(s) | 372 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 20 |
| BsmAI | GTCTC | 1 cut(s) | 308 |
| BsmFI | GGGAC | 1 cut(s) | 372 |
| BsnI | GGCC | 3 cut(s) | 241, 352, 440 |
| Bsp1286I | GDGCHC | 1 cut(s) | 361 |
| Bsp143I | GATC | 2 cut(s) | 31, 180 |
| Bsp19I | CCATGG | 2 cut(s) | 431, 441 |
| BspACI | CCGC | 2 cut(s) | 493, 510 |
| BspANI | GGCC | 3 cut(s) | 241, 352, 440 |
| BspCNI | CTCAG | 1 cut(s) | 327 |
| BspFNI | CGCG | 1 cut(s) | 517 |
| BspLI | GGNNCC | 1 cut(s) | 182 |
| BspPI | GGATC | 2 cut(s) | 175, 188 |
| BsrDI | GCAATG | 1 cut(s) | 130 |
| BsrI | ACTGG | 3 cut(s) | 25, 182, 257 |
| BssECI | CCNNGG | 2 cut(s) | 431, 441 |
| BssMI | GATC | 2 cut(s) | 31, 180 |
| BssNI | GRCGYC | 1 cut(s) | 385 |
| BssT1I | CCWWGG | 2 cut(s) | 431, 441 |
| Bst2UI | CCWGG | 1 cut(s) | 15 |
| Bst4CI | ACNGT | 2 cut(s) | 148, 426 |
| BstACI | GRCGYC | 1 cut(s) | 385 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 24, 164, 472 |
| BstC8I | GCNNGC | 1 cut(s) | 487 |
| BstDEI | CTNAG | 1 cut(s) | 335 |
| BstDSI | CCRYGG | 2 cut(s) | 431, 441 |
| BstF5I | GGATG | 2 cut(s) | 29, 489 |
| BstFNI | CGCG | 1 cut(s) | 517 |
| BstHHI | GCGC | 1 cut(s) | 517 |
| BstKTI | GATC | 2 cut(s) | 34, 183 |
| BstMAI | GTCTC | 1 cut(s) | 308 |
| BstMBI | GATC | 2 cut(s) | 31, 180 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 24, 164, 472 |
| BstNI | CCWGG | 1 cut(s) | 15 |
| BstSCI | CCNGG | 3 cut(s) | 13, 213, 352 |
| BstUI | CGCG | 1 cut(s) | 517 |
| BstV1I | GCAGC | 2 cut(s) | 56, 478 |
| BstX2I | RGATCY | 1 cut(s) | 180 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 199 |
| BstYI | RGATCY | 1 cut(s) | 180 |
| BsuI | GTATCC | 1 cut(s) | 438 |
| BsuRI | GGCC | 3 cut(s) | 241, 352, 440 |
| BtgI | CCRYGG | 2 cut(s) | 431, 441 |
| BtsCI | GGATG | 2 cut(s) | 29, 489 |
| BtsI | GCAGTG | 1 cut(s) | 502 |
| BtsIMutI | CAGTG | 3 cut(s) | 18, 175, 502 |
| Cac8I | GCNNGC | 1 cut(s) | 487 |
| CaiI | CAGNNNCTG | 1 cut(s) | 20 |
| CfoI | GCGC | 1 cut(s) | 517 |
| Cfr13I | GGNCC | 2 cut(s) | 240, 351 |
| CseI | GACGC | 1 cut(s) | 374 |
| Csp6I | GTAC | 1 cut(s) | 132 |
| CviAII | CATG | 7 cut(s) | 49, 91, 199, 323, 408, 432, 442 |
| CviQI | GTAC | 1 cut(s) | 132 |
| DdeI | CTNAG | 1 cut(s) | 335 |
| DpnI | GATC | 2 cut(s) | 33, 182 |
| DpnII | GATC | 2 cut(s) | 31, 180 |
| EaeI | YGGCCR | 1 cut(s) | 438 |
| Ecl136II | GAGCTC | 1 cut(s) | 359 |
| Eco130I | CCWWGG | 2 cut(s) | 431, 441 |
| Eco24I | GRGCYC | 1 cut(s) | 361 |
| Eco53kI | GAGCTC | 1 cut(s) | 359 |
| EcoICRI | GAGCTC | 1 cut(s) | 359 |
| EcoRII | CCWGG | 1 cut(s) | 13 |
| EcoT14I | CCWWGG | 2 cut(s) | 431, 441 |
| EcoT38I | GRGCYC | 1 cut(s) | 361 |
| ErhI | CCWWGG | 2 cut(s) | 431, 441 |
| FaeI | CATG | 7 cut(s) | 52, 94, 202, 326, 411, 435, 445 |
| FaqI | GGGAC | 1 cut(s) | 372 |
| FatI | CATG | 7 cut(s) | 48, 90, 198, 322, 407, 431, 441 |
| Fnu4HI | GCNGC | 2 cut(s) | 45, 467 |
| FokI | GGATG | 2 cut(s) | 36, 476 |
| FriOI | GRGCYC | 1 cut(s) | 361 |
| Fsp4HI | GCNGC | 2 cut(s) | 45, 467 |
| FspBI | CTAG | 2 cut(s) | 140, 507 |
| GlaI | GCGC | 1 cut(s) | 516 |
| GluI | GCNGC | 2 cut(s) | 45, 467 |
| HaeIII | GGCC | 3 cut(s) | 241, 352, 440 |
| HapII | CCGG | 2 cut(s) | 214, 354 |
| HgaI | GACGC | 1 cut(s) | 374 |
| HhaI | GCGC | 1 cut(s) | 517 |
| Hin1I | GRCGYC | 1 cut(s) | 385 |
| Hin1II | CATG | 7 cut(s) | 52, 94, 202, 326, 411, 435, 445 |
| Hin6I | GCGC | 1 cut(s) | 515 |
| HinP1I | GCGC | 1 cut(s) | 515 |
| HpaII | CCGG | 2 cut(s) | 214, 354 |
| HphI | GGTGA | 2 cut(s) | 29, 82 |
| Hpy188III | TCNNGA | 1 cut(s) | 140 |
| HpyAV | CCTTC | 1 cut(s) | 342 |
| HpyCH4III | ACNGT | 2 cut(s) | 148, 426 |
| HpyCH4IV | ACGT | 1 cut(s) | 60 |
| HpyCH4V | TGCA | 5 cut(s) | 27, 158, 167, 407, 500 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 24, 164, 472 |
| HpyF3I | CTNAG | 1 cut(s) | 335 |
| HpySE526I | ACGT | 1 cut(s) | 60 |
| Hsp92I | GRCGYC | 1 cut(s) | 385 |
| Hsp92II | CATG | 7 cut(s) | 52, 94, 202, 326, 411, 435, 445 |
| HspAI | GCGC | 1 cut(s) | 515 |
| Kzo9I | GATC | 2 cut(s) | 31, 180 |
| LmnI | GCTCC | 2 cut(s) | 356, 512 |
| LpnPI | CCDG | 7 cut(s) | 6, 27, 163, 227, 270, 367, 471 |
| Lsp1109I | GCAGC | 2 cut(s) | 56, 478 |
| LweI | GCATC | 3 cut(s) | 14, 167, 498 |
| MaeI | CTAG | 2 cut(s) | 140, 507 |
| MaeII | ACGT | 1 cut(s) | 60 |
| MaeIII | GTNAC | 1 cut(s) | 338 |
| MalI | GATC | 2 cut(s) | 33, 182 |
| MboI | GATC | 2 cut(s) | 31, 180 |
| MboII | GAAGA | 1 cut(s) | 26 |
| MflI | RGATCY | 1 cut(s) | 180 |
| MhlI | GDGCHC | 1 cut(s) | 361 |
| MlsI | TGGCCA | 1 cut(s) | 440 |
| MluCI | AATT | 2 cut(s) | 9, 536 |
| MluNI | TGGCCA | 1 cut(s) | 440 |
| MnlI | CCTC | 3 cut(s) | 258, 319, 323 |
| Mox20I | TGGCCA | 1 cut(s) | 440 |
| MscI | TGGCCA | 1 cut(s) | 440 |
| MseI | TTAA | 3 cut(s) | 225, 369, 539 |
| Msp20I | TGGCCA | 1 cut(s) | 440 |
| MspI | CCGG | 2 cut(s) | 214, 354 |
| MspR9I | CCNGG | 3 cut(s) | 15, 215, 354 |
| MvaI | CCWGG | 1 cut(s) | 15 |
| MvnI | CGCG | 1 cut(s) | 517 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 24, 164, 472 |
| NciI | CCSGG | 2 cut(s) | 215, 354 |
| NcoI | CCATGG | 2 cut(s) | 431, 441 |
| NdeII | GATC | 2 cut(s) | 31, 180 |
| NlaIII | CATG | 7 cut(s) | 52, 94, 202, 326, 411, 435, 445 |
| NlaIV | GGNNCC | 1 cut(s) | 182 |
| NmuCI | GTSAC | 1 cut(s) | 338 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 20 |
| PkrI | GCNGC | 2 cut(s) | 46, 468 |
| PshBI | ATTAAT | 2 cut(s) | 369, 539 |
| Psp124BI | GAGCTC | 1 cut(s) | 361 |
| Psp6I | CCWGG | 1 cut(s) | 13 |
| PspGI | CCWGG | 1 cut(s) | 13 |
| PspN4I | GGNNCC | 1 cut(s) | 182 |
| PspPI | GGNCC | 2 cut(s) | 240, 351 |
| PstNI | CAGNNNCTG | 1 cut(s) | 20 |
| PsuI | RGATCY | 1 cut(s) | 180 |
| RsaI | GTAC | 1 cut(s) | 133 |
| RsaNI | GTAC | 1 cut(s) | 132 |
| SacI | GAGCTC | 1 cut(s) | 361 |
| SaqAI | TTAA | 3 cut(s) | 225, 369, 539 |
| SatI | GCNGC | 2 cut(s) | 45, 467 |
| Sau3AI | GATC | 2 cut(s) | 31, 180 |
| Sau96I | GGNCC | 2 cut(s) | 240, 351 |
| ScrFI | CCNGG | 3 cut(s) | 15, 215, 354 |
| SduI | GDGCHC | 1 cut(s) | 361 |
| SetI | ASST | 4 cut(s) | 63, 72, 139, 361 |
| SfaNI | GCATC | 3 cut(s) | 14, 167, 498 |
| Sse9I | AATT | 2 cut(s) | 9, 536 |
| SsiI | CCGC | 2 cut(s) | 493, 510 |
| SspMI | CTAG | 2 cut(s) | 140, 507 |
| SstI | GAGCTC | 1 cut(s) | 361 |
| StyD4I | CCNGG | 3 cut(s) | 13, 213, 352 |
| StyI | CCWWGG | 2 cut(s) | 431, 441 |
| TaaI | ACNGT | 2 cut(s) | 148, 426 |
| TaiI | ACGT | 1 cut(s) | 63 |
| TaqI | TCGA | 1 cut(s) | 277 |
| TasI | AATT | 2 cut(s) | 9, 536 |
| Tru1I | TTAA | 3 cut(s) | 225, 369, 539 |
| Tru9I | TTAA | 3 cut(s) | 225, 369, 539 |
| TscAI | CASTG | 3 cut(s) | 25, 182, 502 |
| TseFI | GTSAC | 1 cut(s) | 338 |
| TseI | GCWGC | 2 cut(s) | 44, 466 |
| Tsp45I | GTSAC | 1 cut(s) | 338 |
| TspDTI | ATGAA | 1 cut(s) | 65 |
| TspGWI | ACGGA | 1 cut(s) | 468 |
| TspRI | CASTG | 3 cut(s) | 25, 182, 502 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 20 |
| VspI | ATTAAT | 2 cut(s) | 369, 539 |
| XbaI | TCTAGA | 1 cut(s) | 139 |
| XspI | CTAG | 2 cut(s) | 140, 507 |