RLG00000029171

Domain of unknown function

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
34018892 .. 34022713
3822 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029171

Sequence Viewer

Length: 2226 bp
ATGGCAGCCACAGTAGTCCCTAGTGTAACGGTTAATATTAAAGCTCTTAACCAAGATAACTACGACTACTGGTTCTTTCGGGTGAAAACATACTTGATGGCTGAAGGTTTGTGGGATGTTGTCGATGGAATAAATATACCTCCAAAAGTAGAAGACCCTGAATTCATGGCTTGGCAGAAAATTAATGCCAGAGCCTTGCAAGCTATCATCATATTTTGCGGGGCTGATGCTGAGTCCTTTATTAAATATATCACAATGGCGAAAGATGCCTGGAATATTTTGGTAAAACAGTTCAAGCCTCCTGAAATTTTAGAAACTCCAGAAGAGACGCATGAAGTTGACTCGAGTGACGAAGTCGTCACAATTGATGATGAATACTTGGAAGTAGCAGGGGTTGGAGAACATAAACGTTTCTTTGCGGGGGTATTGGCCCGGAATTGGGAAGCTGTGAAGGAGCTTATTGACCAAAATCCAGGGGCAATAAGAGCAAAATTTCAAAACACCGACAAGACAGCTCTTCACTTTGCAGTCCAGTTCAAGGACGTGACCGGTGTAAAAGAGTTGCTACCGTTTATGAAAAACAAAGACTTTGAAATGGTAGACCATGATGGACATACTCCTCTTTCTATGGCTATACTAGAAAAGGATACAGATGTGATGACCGAAATTGCTAAGTGCATAGTTGAGAATAACAAGAAACTACTCCTTCGTATTGTCGATCCTTCCACCAATACTGTTCCACTCCTGATGGCTCTGACGTTGGACAGACCAAAAATGGCTACTTATCTCTATGATGCTACTCCACTTGAAAAGCTTAAGAATAGGGACCGAGCCGAGCTACTTTCCACAAGTTTGAGAGTAAAACATTTACATACTTCGTTGGACTTAATACAGCGTTTTCCAAGCTTGGCTATTGCTCAAGACCACTCCGGCGAATCTCCTTTAAATGCATTGGCTAGTACGGCTGGATTATTCCTAAATGCTAGCCAGCTCGGAATATTGGAACGATGGATTTATAATTGTATACACATACCACCCACACCTACACATACCCCTGAGGTTTATATAGATGTTCAGAAAGAAGAGGAAGATCAAGGCAATCAGAAGAATCTCATTCGCGAAGTTTCATATTTCTCTGGAGGACTAGTTGCCAATCTCCTTCACCTTTCTGGAATCAATCGTACACGTATATATCAAATGAAATTGCTCCATGTCAAGACCATCGAAATTCTACAATGCATGCTAAAAGTGTTAAAAAGTGAAGATGATCTCAACATTACACAACATAAATTGGTCCAAAAAGCACTCTTCCAAGCAGTGGAACGAGGACATGCTCCATTCATCTACCACTTATTGAGACCTAATCCAAGGTTCCTTGCGATCACTAATGAACATGACAAGACCGTTTTTCAATTTGCTGTTGAGCATCGCCAAGACGAAGTTTTTAACCTAATACATGAATTTGATGAACAAAAGAGAAAAGACATTGTAGGCAGAAAAGATAAGTTTGGGAATAACTTGCTGCATGTGGTAGGAAGGTTATCCCCATTAACGCAGATTGCTCATATTCGAGGCGCAGCTTTGCAAATGCAGAAAGAACTCCAATGGTTCAAGATGGTCGAGCGCATGGCAAGTCCTAAGGATCTTAATTGTATAAATTCAGATGGTCGCACACCCCGTGAGGAATTTACTATGAACCACAAGAATTTGGTAGAGGCAGCAGAAAAGTCAATTAAAGAAACTGCAACTTCTTCTTCGGCACTTGTAGCTGCTCTTATCATTACCATTATGTTCGCTGCAACAGTGGCAACTCCTGGTGGAATTAAGGACGTCACAGGTATTCCTATATACTTGAACACCAAGGCATTTCGGATCTTTATAGTTGCAGATGTTACATCGCTCTGCTCTTCCACAACTTCAGTAATGATATTTTTGGGAATCCTCACATCACGTTTTTCAGAAGAAGATTTCCTCACATCCTTGCCCACAAAATTGATAATTGGCTTTCTTACCCTGTTTCTGTCTATCGGGGCCATGATGATTGCCTTTTCTTCTAGCATTTTCATTATGCTCCATGAACAACAATCTATTGTTAGTCTATCTATCGTACTCGCTATTCTTCCAATTGCCTCATTCCTATGGATGCAATTTCCTTTCCTTCTTGATATCATTATTTCTACTTATGGATTCAGAGTATTTAAAAGGAGAGTAGAAATTAAGGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

742

Amino Acids

83.87

Weight (kDa)

6.22

Isoelectric Point (pI)

34.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 148 - 226 1e-06 Ankyrin repeats (3 copies)
PGG PF13962 580 - 689 7e-21 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000027)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18670 AT3G18670 AT3G54065
fragaria_vesca FvH4_1g26570 FvH4_1g26570 FvH4_5g19270 FvH4_5g19273 FvH4_5g35840 FvH4_5g36340 FvH4_5g36630 FvH4_5g37181 FvH4_5g37182 FvH4_5g37185 FvH4_5g37240 FvH4_5g37260 FvH4_6g21440 FvH4_6g44571 FvH4_6g44572 FvH4_6g44610 FvH4_6g44620 FvH4_6g44650 FvH4_6g44660 FvH4_6g45151 FvH4_6g45152 FvH4_6g45152 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45154 FvH4_6g51440 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090
malus_domestica MD00G1010300.v1.1 MD00G1010400.v1.1 MD00G1010500.v1.1 MD00G1011000.v1.1 MD00G1011200.v1.1 MD00G1011500.v1.1 MD00G1011900.v1.1 MD03G1133900.v1.1 MD03G1134100.v1.1 MD09G1086300.v1.1 MD09G1086500.v1.1 MD09G1086900.v1.1 MD09G1087000.v1.1 MD09G1088000.v1.1 MD09G1088100.v1.1 MD09G1088200.v1.1 MD09G1088300.v1.1 MD09G1089000.v1.1 MD09G1089300.v1.1 MD09G1133800.v1.1 MD16G1219400.v1.1 MD17G1027900.v1.1 MD17G1028400.v1.1 MD17G1028600.v1.1 MD17G1028700.v1.1 MD17G1028900.v1.1 MD17G1029000.v1.1 MD17G1029100.v1.1 MD17G1029200.v1.1 MD17G1075400.v1.1 MD17G1076000.v1.1 MD17G1077000.v1.1 MD17G1077100.v1.1 MD17G1077800.v1.1 MD17G1078000.v1.1 MD17G1078100.v1.1 MD17G1078300.v1.1 MD17G1100900.v1.1 MD17G1101100.v1.1 MD17G1101400.v1.1 MD17G1104200.v1.1 MD17G1104500.v1.1 MD17G1121300.v1.1 MD17G1121600.v1.1 MD17G1121900.v1.1 MD17G1122700.v1.1 MD17G1218800.v1.1
prunus_persica Prupe.2G033800_v2.0.a1 Prupe.2G033900_v2.0.a1 Prupe.2G080300_v2.0.a1 Prupe.2G080700_v2.0.a1 Prupe.2G080900_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G082000_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082200_v2.0.a1 Prupe.2G082300_v2.0.a1 Prupe.2G082700_v2.0.a1 Prupe.2G082800_v2.0.a1 Prupe.2G082900_v2.0.a1 Prupe.3G235600_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236800_v2.0.a1 Prupe.3G237000_v2.0.a1 Prupe.3G237100_v2.0.a1 Prupe.3G237300_v2.0.a1 Prupe.3G237400_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.4G282500_v2.0.a1 Prupe.4G282500_v2.0.a1
pyrus_communis pycom03g08990 pycom03g09000 pycom09g01180 pycom09g01190 pycom09g01220 pycom09g01230 pycom09g01360 pycom09g01370 pycom09g01380 pycom09g01410 pycom09g05500 pycom11g10280 pycom11g10290 pycom11g10310 pycom16g18270 pycom16g18280 pycom17g02280 pycom17g02290 pycom17g02300 pycom17g02360 pycom17g02390 pycom17g02410 pycom17g02440 pycom17g02460 pycom17g02470 pycom17g02480 pycom17g02510 pycom17g02530 pycom17g02540 pycom17g02550 pycom17g02560 pycom17g02570 pycom17g02580 pycom17g02630 pycom17g02640 pycom17g04970 pycom17g04980 pycom17g05010 pycom17g07090 pycom17g07620 pycom17g07630 pycom17g07640 pycom17g07650 pycom17g07660 pycom17g07740 pycom17g07760 pycom17g07770 pycom17g09580 pycom17g11170 pycom17g11200 pycom17g11220 pycom17g11240 pycom17g11250 pycom17g11300 pycom17g11340 pycom17g11380 pycom17g11440
rosa_chinensis RchiOBHm_Chr1g0332901 RchiOBHm_Chr1g0338981 RchiOBHm_Chr1g0338991 RchiOBHm_Chr1g0341201 RchiOBHm_Chr1g0341211 RchiOBHm_Chr1g0342721 RchiOBHm_Chr1g0343191 RchiOBHm_Chr2g0146761 RchiOBHm_Chr2g0161791 RchiOBHm_Chr2g0161801 RchiOBHm_Chr2g0161841 RchiOBHm_Chr2g0162041 RchiOBHm_Chr2g0162651 RchiOBHm_Chr2g0162691 RchiOBHm_Chr2g0162701 RchiOBHm_Chr2g0162711 RchiOBHm_Chr2g0162721 RchiOBHm_Chr2g0162811 RchiOBHm_Chr2g0162831 RchiOBHm_Chr2g0162841 RchiOBHm_Chr4g0416381 RchiOBHm_Chr4g0416391 RchiOBHm_Chr5g0075981 RchiOBHm_Chr6g0276101 RchiOBHm_Chr7g0214581 RchiOBHm_Chr7g0214631 RchiOBHm_Chr7g0214651 RchiOBHm_Chr7g0214721 RchiOBHm_Chr7g0223161 RchiOBHm_Chr7g0230661 RchiOBHm_Chr7g0230751 RchiOBHm_Chr7g0230781 RchiOBHm_Chr7g0234581 RchiOBHm_Chr7g0234601 RchiOBHm_Chr7g0237561 RchiOBHm_Chr7g0237571 RchiOBHm_Chr7g0238781 RchiOBHm_Chr7g0238811 RchiOBHm_Chr7g0242161 RchiOBHm_Chr7g0242401 RchiOBHm_Chr7g0242451 RchiOBHm_Chr7g0242921 RchiOBHm_Chr7g0242981 RchiOBHm_Chr7g0243111 RchiOBHm_Chr7g0243251 RchiOBHm_Chr7g0243331
rosa_laevigata RLG00000000803 RLG00000000807 RLG00000000809 RLG00000000811 RLG00000000814 RLG00000000854 RLG00000000859 RLG00000000864 RLG00000000994 RLG00000000995 RLG00000001458 RLG00000001461 RLG00000001474 RLG00000001476 RLG00000002729 RLG00000002730 RLG00000003505 RLG00000008871 RLG00000008873 RLG00000018513 RLG00000021300 RLG00000021303 RLG00000021318 RLG00000021356 RLG00000021357 RLG00000029070 RLG00000029071 RLG00000029171 RLG00000029189 RLG00000029190 RLG00000029640 RLG00000034635
rosa_multiflora Rmu_co8149086.1_g000001 Rmu_co8460577.1_g000001 Rmu_sc0000429.1_g000062 Rmu_sc0000429.1_g000071 Rmu_sc0000429.1_g000081 Rmu_sc0000863.1_g000020 Rmu_sc0001488.1_g000011 Rmu_sc0001545.1_g000007 Rmu_sc0001849.1_g000068 Rmu_sc0001993.1_g000003 Rmu_sc0002222.1_g000002 Rmu_sc0002308.1_g000053 Rmu_sc0002308.1_g000069 Rmu_sc0002480.1_g000007 Rmu_sc0003179.1_g000041 Rmu_sc0004213.1_g000011 Rmu_sc0007101.1_g000012 Rmu_sc0008565.1_g000011 Rmu_sc0009298.1_g000003 Rmu_sc0010407.1_g000009 Rmu_sc0010407.1_g000013 Rmu_sc0026966.1_g000004 Rmu_ssc0000152.1_g000012 Rmu_ssc0000152.1_g000014 Rmu_ssc0000295.1_g000021 Rmu_ssc0000295.1_g000026
rosa_roxburghii Rroxscaffold_1G00029600 Rroxscaffold_2G00087790 Rroxscaffold_2G00087800 Rroxscaffold_2G00088360 Rroxscaffold_2G00088500 Rroxscaffold_2G00088530 Rroxscaffold_2G00088590 Rroxscaffold_3G00221570 Rroxscaffold_3G00222190 Rroxscaffold_3G00222240 Rroxscaffold_3G00222880 Rroxscaffold_3G00222900 Rroxscaffold_3G00223990 Rroxscaffold_3G00229750 Rroxscaffold_3G00229760 Rroxscaffold_3G00245140 Rroxscaffold_3G00245150 Rroxscaffold_3G00245200 Rroxscaffold_3G00253520 Rroxscaffold_3G00253530 Rroxscaffold_4G00294500 Rroxscaffold_4G00311800 Rroxscaffold_4G00311830 Rroxscaffold_4G00311850 Rroxscaffold_4G00313180 Rroxscaffold_4G00313210 Rroxscaffold_4G00316270 Rroxscaffold_4G00317910 Rroxscaffold_4G00317920 Rroxscaffold_5G00349290 Rroxscaffold_5G00349300 Rroxscaffold_5G00349310 Rroxscaffold_5G00351950 Rroxscaffold_5G00351960 Rroxscaffold_5G00353390 Rroxscaffold_7G00192540
rosa_rugosa Rorug01G0102500 Rorug01G0102600 Rorug01G0146400.1 Rorug01G0146500.1 Rorug01G0159400.1 Rorug01G0159500.1 Rorug02G0491900 Rorug02G0492000 Rorug02G0492100 Rorug02G0492200 Rorug02G0492300 Rorug02G0492400 Rorug02G0492500 Rorug02G0492700 Rorug02G0498500 Rorug02G0498600 Rorug02G0498800 Rorug04G0006900 Rorug04G0053700 Rorug06G0002000 Rorug06G0002100 Rorug07G0304700 Rorug07G0304800 Rorug07G0304800 Rorug07G0304800 Rorug07G0305300 Rorug07G0305400 Rorug07G0305500 Rorug07G0305500 Rorug07G0318300 Rorug07G0318600 Rorug07G0323600
rosa_samantha Rh1AG128900 Rh1AG162500 Rh1AG163000 Rh1AG164000 Rh1AG164700 Rh1AG173200 Rh1AG173300 Rh1AG173800 Rh1BG098100 Rh1BG129800 Rh1BG130600 Rh1BG141300 Rh1BG141500 Rh1BG141600 Rh1CG122700 Rh1CG151900 Rh1CG152400 Rh1CG153100 Rh1CG153500 Rh1CG161400 Rh1CG161600 Rh1DG134200 Rh1DG173500 Rh1DG173700 Rh2AG558100 Rh2AG558500 Rh2AG560200 Rh2AG564700 Rh2AG564800 Rh2BG465600 Rh2BG571700 Rh2BG572000 Rh2BG573500 Rh2CG439800 Rh2CG541800 Rh2CG542100 Rh2CG542200 Rh2CG543800 Rh2CG547300 Rh2DG474700 Rh2DG580600 Rh2DG580900 Rh2DG581200 Rh2DG581700 Rh2DG581800 Rh2DG583500 Rh2DG587200 Rh2DG587300 Rh2DG587400 Rh4AG128900 Rh4AG203800 Rh4AG319900 Rh4AG320000 Rh4BG122200 Rh4BG201100 Rh4CG136000 Rh4DG122400 Rh4DG201100 Rh4DG323600 Rh6BG077000 Rh6DG206200 Rh7AG282300 Rh7AG282500 Rh7AG283400 Rh7AG358600 Rh7AG414500 Rh7AG415200 Rh7AG415500 Rh7AG461700 Rh7AG469300 Rh7AG477800 Rh7BG273900 Rh7BG274000 Rh7BG390400 Rh7BG390500 Rh7BG391500 Rh7BG391800 Rh7BG408300 Rh7BG432000 Rh7BG439200 Rh7BG449200 Rh7BG449900 Rh7BG450400 Rh7BG450500 Rh7CG220900 Rh7CG301600 Rh7CG302700 Rh7CG377000 Rh7CG433900 Rh7CG434200 Rh7CG478800 Rh7DG286200 Rh7DG354000 Rh7DG424600 Rh7DG448000 Rh7DG462800 Rh7DG462900
rosa_wichuraiana Rw0G003440 Rw0G011970 Rw0G017120 Rw0G017130 Rw0G017140 Rw0G018470 Rw0G018480 Rw0G020440 Rw1G010470 Rw2G046180 Rw2G046210 Rw2G046230 Rw2G046390 Rw2G046400 Rw2G046710 Rw2G046720 Rw2G046730 Rw3G025310 Rw4G010410 Rw4G017250 Rw6G018270 Rw7G018180 Rw7G024130 Rw7G024160 Rw7G024170 Rw7G034060 Rw7G034250 Rw7G034260 Rw7G034400 Rw7G034410 Rw7G038210 Rw7G039020 Rw7G039060 Rw7G039280 Rw7G039400 Rw7G039470 Rw7G039880 Rw7G039890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1017
AasI GACNNNNNNGTC 1 cut(s) 356
AatII GACGTC 1 cut(s) 1833
AccB7I CCANNNNNTGG 1 cut(s) 1318
AccI GTMKAC 2 cut(s) 600, 1024
AccII CGCG 1 cut(s) 1119
AciI CCGC 2 cut(s) 219, 419
AclI AACGTT 1 cut(s) 409
AclWI GGATC 3 cut(s) 713, 1650, 1880
AcsI RAATTY 8 cut(s) 161, 306, 491, 1227, 1460, 1657, 1685, 1705
AcuI CTGAAG 2 cut(s) 123, 1902
AcyI GRCGYC 1 cut(s) 1830
AdeI CACNNNGTG 1 cut(s) 1679
AfaI GTAC 3 cut(s) 961, 1183, 2109
AfiI CCNNNNNNNGG 4 cut(s) 438, 439, 538, 1318
AflII CTTAAG 1 cut(s) 815
AflIII ACRYGT 1 cut(s) 1184
AgeI ACCGGT 1 cut(s) 548
AgsI TTSAA 8 cut(s) 295, 497, 538, 593, 809, 1412, 1612, 1855
AhlI ACTAGT 1 cut(s) 1144
AjiI CACGTC 1 cut(s) 544
AjnI CCWGG 3 cut(s) 269, 472, 1813
Alw26I GTCTC 2 cut(s) 320, 1351
AlwI GGATC 3 cut(s) 713, 1650, 1880
Ama87I CYCGRG 1 cut(s) 343
AoxI GGCC 2 cut(s) 429, 2031
ApeKI GCWGC 6 cut(s) 5, 1522, 1577, 1718, 1769, 1796
ApoI RAATTY 8 cut(s) 161, 306, 491, 1227, 1460, 1657, 1685, 1705
AseI ATTAAT 1 cut(s) 183
AsiGI ACCGGT 1 cut(s) 548
AspLEI GCGC 2 cut(s) 1577, 1626
AspS9I GGNCC 4 cut(s) 430, 826, 1294, 2031
AsuC2I CCSGG 1 cut(s) 433
AsuHPI GGTGA 2 cut(s) 94, 1154
AsuNHI GCTAGC 1 cut(s) 983
AvaI CYCGRG 1 cut(s) 343
AvaII GGWCC 2 cut(s) 826, 1294
AxyI CCTNAGG 2 cut(s) 1056, 1638
BaeI ACNNNNGTAYC 2 cut(s) 639, 672
BbsI GAAGAC 1 cut(s) 159
BbvI GCAGC 6 cut(s) 17, 1509, 1589, 1730, 1756, 1783
BccI CCATC 8 cut(s) 91, 119, 602, 742, 1002, 1229, 1609, 1658
BceAI ACGGC 1 cut(s) 978
BciT130I CCWGG 3 cut(s) 271, 474, 1815
BciVI GTATCC 1 cut(s) 640
BcnI CCSGG 1 cut(s) 433
BcoDI GTCTC 2 cut(s) 320, 1351
BcuI ACTAGT 1 cut(s) 1144
BfaI CTAG 6 cut(s) 21, 638, 957, 984, 1145, 2055
BfrI CTTAAG 1 cut(s) 815
BfuI GTATCC 1 cut(s) 640
BisI GCNGC 6 cut(s) 6, 1523, 1578, 1719, 1770, 1797
BlsI GCNGC 6 cut(s) 7, 1524, 1579, 1720, 1771, 1798
Bme1390I CCNGG 4 cut(s) 271, 433, 474, 1815
Bme18I GGWCC 2 cut(s) 826, 1294
BmeT110I CYCGRG 1 cut(s) 343
BmgBI CACGTC 1 cut(s) 544
BmgT120I GGNCC 4 cut(s) 430, 826, 1294, 2031
BmiI GGNNCC 3 cut(s) 827, 1373, 2032
BmrFI CCNGG 4 cut(s) 271, 433, 474, 1815
BmsI GCATC 5 cut(s) 217, 256, 784, 1435, 2133
BmtI GCTAGC 1 cut(s) 987
BpiI GAAGAC 1 cut(s) 159
BpmI CTGGAG 2 cut(s) 303, 1158
BpuEI CTTGAG 1 cut(s) 903
BpuMI CCSGG 1 cut(s) 433
BsaAI YACGTR 1 cut(s) 1187
BsaHI GRCGYC 1 cut(s) 1830
BsaI GGTCTC 1 cut(s) 1351
BsaJI CCNNGG 3 cut(s) 473, 1367, 1860
BsaWI WCCGGW 1 cut(s) 548
BsaXI ACNNNNNCTCC 2 cut(s) 1131, 1161
Bsc4I CCNNNNNNNGG 4 cut(s) 438, 439, 538, 1318
Bse118I RCCGGY 1 cut(s) 548
Bse1I ACTGG 2 cut(s) 74, 532
Bse21I CCTNAGG 2 cut(s) 1056, 1638
BseBI CCWGG 3 cut(s) 271, 474, 1815
BseDI CCNNGG 3 cut(s) 473, 1367, 1860
BseGI GGATG 3 cut(s) 121, 1976, 2148
BseLI CCNNNNNNNGG 4 cut(s) 438, 439, 538, 1318
BseMII CTCAG 2 cut(s) 222, 1047
BseNI ACTGG 2 cut(s) 74, 532
BseRI GAGGAG 1 cut(s) 609
BseXI GCAGC 6 cut(s) 17, 1509, 1589, 1730, 1756, 1783
Bsh1236I CGCG 1 cut(s) 1119
BshFI GGCC 2 cut(s) 431, 2033
BshTI ACCGGT 1 cut(s) 548
BsiHKCI CYCGRG 1 cut(s) 343
BsiSI CCGG 3 cut(s) 433, 549, 930
BslFI GGGAC 2 cut(s) 2, 839
BslI CCNNNNNNNGG 4 cut(s) 438, 439, 538, 1318
BsmAI GTCTC 2 cut(s) 320, 1351
BsmBI CGTCTC 1 cut(s) 320
BsmFI GGGAC 2 cut(s) 2, 839
BsnI GGCC 2 cut(s) 431, 2033
Bso31I GGTCTC 1 cut(s) 1351
BsoBI CYCGRG 1 cut(s) 343
Bsp143I GATC 6 cut(s) 718, 1090, 1267, 1380, 1642, 1872
Bsp68I TCGCGA 1 cut(s) 1119
BspACI CCGC 2 cut(s) 219, 419
BspANI GGCC 2 cut(s) 431, 2033
BspCNI CTCAG 2 cut(s) 223, 1048
BspFNI CGCG 1 cut(s) 1119
BspLI GGNNCC 3 cut(s) 827, 1373, 2032
BspOI GCTAGC 1 cut(s) 987
BspPI GGATC 3 cut(s) 713, 1650, 1880
BspQI GCTCTTC 2 cut(s) 522, 1912
BspTI CTTAAG 1 cut(s) 815
BspTNI GGTCTC 1 cut(s) 1351
BsrFI RCCGGY 1 cut(s) 548
BsrI ACTGG 2 cut(s) 74, 532
BssAI RCCGGY 1 cut(s) 548
BssECI CCNNGG 3 cut(s) 473, 1367, 1860
BssMI GATC 6 cut(s) 718, 1090, 1267, 1380, 1642, 1872
BssNAI GTATAC 1 cut(s) 1025
BssNI GRCGYC 1 cut(s) 1830
BssT1I CCWWGG 2 cut(s) 1367, 1860
Bst1107I GTATAC 1 cut(s) 1025
Bst2UI CCWGG 3 cut(s) 271, 474, 1815
Bst4CI ACNGT 7 cut(s) 13, 31, 291, 570, 736, 1405, 1804
Bst6I CTCTTC 5 cut(s) 318, 522, 1077, 1313, 1912
BstACI GRCGYC 1 cut(s) 1830
BstAFI CTTAAG 1 cut(s) 815
BstBAI YACGTR 1 cut(s) 1187
BstC8I GCNNGC 4 cut(s) 201, 985, 989, 1241
BstDEI CTNAG 4 cut(s) 231, 672, 1056, 1638
BstF5I GGATG 3 cut(s) 121, 1976, 2148
BstFNI CGCG 1 cut(s) 1119
BstHHI GCGC 2 cut(s) 1577, 1626
BstKTI GATC 6 cut(s) 721, 1093, 1270, 1383, 1645, 1875
BstMAI GTCTC 2 cut(s) 320, 1351
BstMBI GATC 6 cut(s) 718, 1090, 1267, 1380, 1642, 1872
BstMWI GCNNNNNNNGC 6 cut(s) 200, 266, 485, 962, 1766, 1805
BstNI CCWGG 3 cut(s) 271, 474, 1815
BstNSI RCATGY 3 cut(s) 1243, 1334, 1529
BstSCI CCNGG 4 cut(s) 269, 431, 472, 1813
BstUI CGCG 1 cut(s) 1119
BstV1I GCAGC 6 cut(s) 17, 1509, 1589, 1730, 1756, 1783
BstV2I GAAGAC 1 cut(s) 159
BstX2I RGATCY 2 cut(s) 1642, 1872
BstYI RGATCY 2 cut(s) 1642, 1872
BstZ17I GTATAC 1 cut(s) 1025
Bsu36I CCTNAGG 2 cut(s) 1056, 1638
BsuI GTATCC 1 cut(s) 640
BsuRI GGCC 2 cut(s) 431, 2033
BtgZI GCGATG 2 cut(s) 1412, 1881
BtrI CACGTC 1 cut(s) 544
BtsCI GGATG 3 cut(s) 121, 1976, 2148
BtsI GCAGTG 1 cut(s) 1323
BtsIMutI CAGTG 2 cut(s) 1323, 1809
BtuMI TCGCGA 1 cut(s) 1119
Cac8I GCNNGC 4 cut(s) 201, 985, 989, 1241
CfoI GCGC 2 cut(s) 1577, 1626
Cfr10I RCCGGY 1 cut(s) 548
Cfr13I GGNCC 4 cut(s) 430, 826, 1294, 2031
CseI GACGC 1 cut(s) 337
Csp6I GTAC 3 cut(s) 960, 1182, 2108
CspAI ACCGGT 1 cut(s) 548
CviQI GTAC 3 cut(s) 960, 1182, 2108
DdeI CTNAG 4 cut(s) 231, 672, 1056, 1638
DpnI GATC 6 cut(s) 720, 1092, 1269, 1382, 1644, 1874
DpnII GATC 6 cut(s) 718, 1090, 1267, 1380, 1642, 1872
DraI TTTAAA 2 cut(s) 945, 2200
DraIII CACNNNGTG 1 cut(s) 1679
DrdI GACNNNNNNGTC 1 cut(s) 356
DseDI GACNNNNNNGTC 1 cut(s) 356
Eam1104I CTCTTC 5 cut(s) 318, 522, 1077, 1313, 1912
EarI CTCTTC 5 cut(s) 318, 522, 1077, 1313, 1912
Eco130I CCWWGG 2 cut(s) 1367, 1860
Eco31I GGTCTC 1 cut(s) 1351
Eco32I GATATC 1 cut(s) 2167
Eco47I GGWCC 2 cut(s) 826, 1294
Eco57I CTGAAG 2 cut(s) 123, 1902
Eco81I CCTNAGG 2 cut(s) 1056, 1638
Eco88I CYCGRG 1 cut(s) 343
EcoRI GAATTC 1 cut(s) 161
EcoRII CCWGG 3 cut(s) 269, 472, 1813
EcoRV GATATC 1 cut(s) 2167
EcoT14I CCWWGG 2 cut(s) 1367, 1860
EcoT22I ATGCAT 2 cut(s) 952, 1241
ErhI CCWWGG 2 cut(s) 1367, 1860
Esp3I CGTCTC 1 cut(s) 320
FaqI GGGAC 2 cut(s) 2, 839
FauI CCCGC 2 cut(s) 212, 412
FblI GTMKAC 2 cut(s) 600, 1024
Fnu4HI GCNGC 6 cut(s) 6, 1523, 1578, 1719, 1770, 1797
FokI GGATG 3 cut(s) 128, 1963, 2155
Fsp4HI GCNGC 6 cut(s) 6, 1523, 1578, 1719, 1770, 1797
FspBI CTAG 6 cut(s) 21, 638, 957, 984, 1145, 2055
GlaI GCGC 2 cut(s) 1576, 1625
GluI GCNGC 6 cut(s) 6, 1523, 1578, 1719, 1770, 1797
GsuI CTGGAG 2 cut(s) 303, 1158
HaeIII GGCC 2 cut(s) 431, 2033
HapII CCGG 3 cut(s) 433, 549, 930
HgaI GACGC 1 cut(s) 337
HhaI GCGC 2 cut(s) 1577, 1626
Hin1I GRCGYC 1 cut(s) 1830
Hin6I GCGC 2 cut(s) 1575, 1624
HinP1I GCGC 2 cut(s) 1575, 1624
HincII GTYRAC 1 cut(s) 340
HindII GTYRAC 1 cut(s) 340
HindIII AAGCTT 2 cut(s) 812, 904
HinfI GANTC 7 cut(s) 233, 341, 935, 1108, 1173, 1938, 2187
HpaII CCGG 3 cut(s) 433, 549, 930
HphI GGTGA 2 cut(s) 94, 1154
Hpy166II GTNNAC 4 cut(s) 340, 601, 1025, 1184
Hpy188I TCNGA 8 cut(s) 756, 995, 1077, 1104, 1663, 1872, 1960, 2192
Hpy8I GTNNAC 4 cut(s) 340, 601, 1025, 1184
HpyAV CCTTC 7 cut(s) 98, 445, 716, 732, 1169, 1530, 2168
HpyCH4III ACNGT 7 cut(s) 13, 31, 291, 570, 736, 1405, 1804
HpyCH4IV ACGT 6 cut(s) 409, 543, 758, 1186, 1830, 1951
HpyF10VI GCNNNNNNNGC 6 cut(s) 200, 266, 485, 962, 1766, 1805
HpyF3I CTNAG 4 cut(s) 231, 672, 1056, 1638
HpySE526I ACGT 6 cut(s) 409, 543, 758, 1186, 1830, 1951
Hsp92I GRCGYC 1 cut(s) 1830
HspAI GCGC 2 cut(s) 1575, 1624
Kzo9I GATC 6 cut(s) 718, 1090, 1267, 1380, 1642, 1872
LguI GCTCTTC 2 cut(s) 522, 1912
LmnI GCTCC 4 cut(s) 454, 1212, 1339, 2076
Lsp1109I GCAGC 6 cut(s) 17, 1509, 1589, 1730, 1756, 1783
LweI GCATC 5 cut(s) 217, 256, 784, 1435, 2133
MaeI CTAG 6 cut(s) 21, 638, 957, 984, 1145, 2055
MaeII ACGT 6 cut(s) 409, 543, 758, 1186, 1830, 1951
MaeIII GTNAC 6 cut(s) 25, 347, 358, 544, 1831, 1891
MalI GATC 6 cut(s) 720, 1092, 1269, 1382, 1644, 1874
MboI GATC 6 cut(s) 718, 1090, 1267, 1380, 1642, 1872
MfeI CAATTG 2 cut(s) 363, 2124
MflI RGATCY 2 cut(s) 1642, 1872
MlyI GAGTC 2 cut(s) 242, 335
MmeI TCCRAC 3 cut(s) 376, 741, 861
Mph1103I ATGCAT 2 cut(s) 952, 1241
MslI CAYNNNNRTG 1 cut(s) 2137
MspCI CTTAAG 1 cut(s) 815
MspI CCGG 3 cut(s) 433, 549, 930
MspR9I CCNGG 4 cut(s) 271, 433, 474, 1815
MunI CAATTG 2 cut(s) 363, 2124
MvaI CCWGG 3 cut(s) 271, 474, 1815
MvnI CGCG 1 cut(s) 1119
MwoI GCNNNNNNNGC 6 cut(s) 200, 266, 485, 962, 1766, 1805
NciI CCSGG 1 cut(s) 433
NdeII GATC 6 cut(s) 718, 1090, 1267, 1380, 1642, 1872
NheI GCTAGC 1 cut(s) 983
NlaIV GGNNCC 3 cut(s) 827, 1373, 2032
NmeAIII GCCGAG 1 cut(s) 859
NmuCI GTSAC 4 cut(s) 347, 358, 544, 1831
NruI TCGCGA 1 cut(s) 1119
NsiI ATGCAT 2 cut(s) 952, 1241
NspI RCATGY 3 cut(s) 1243, 1334, 1529
PaeI GCATGC 1 cut(s) 1243
PaeR7I CTCGAG 1 cut(s) 343
PciSI GCTCTTC 2 cut(s) 522, 1912
PcsI WCGNNNNNNNCGW 1 cut(s) 1675
PfeI GAWTC 5 cut(s) 935, 1108, 1173, 1938, 2187
PflFI GACNNNGTC 1 cut(s) 353
PflMI CCANNNNNTGG 1 cut(s) 1318
PinAI ACCGGT 1 cut(s) 548
PkrI GCNGC 6 cut(s) 7, 1524, 1579, 1720, 1771, 1798
PleI GAGTC 2 cut(s) 241, 335
PpsI GAGTC 2 cut(s) 241, 335
Ppu21I YACGTR 1 cut(s) 1187
PshBI ATTAAT 1 cut(s) 183
PsiI TTATAA 1 cut(s) 1017
Psp1406I AACGTT 1 cut(s) 409
Psp6I CCWGG 3 cut(s) 269, 472, 1813
PspGI CCWGG 3 cut(s) 269, 472, 1813
PspN4I GGNNCC 3 cut(s) 827, 1373, 2032
PspPI GGNCC 4 cut(s) 430, 826, 1294, 2031
PspXI VCTCGAGB 1 cut(s) 343
PsuI RGATCY 2 cut(s) 1642, 1872
PsyI GACNNNGTC 1 cut(s) 353
RruI TCGCGA 1 cut(s) 1119
RsaI GTAC 3 cut(s) 961, 1183, 2109
RsaNI GTAC 3 cut(s) 960, 1182, 2108
RseI CAYNNNNRTG 1 cut(s) 2137
SapI GCTCTTC 2 cut(s) 522, 1912
SatI GCNGC 6 cut(s) 6, 1523, 1578, 1719, 1770, 1797
Sau3AI GATC 6 cut(s) 718, 1090, 1267, 1380, 1642, 1872
Sau96I GGNCC 4 cut(s) 430, 826, 1294, 2031
SchI GAGTC 2 cut(s) 242, 335
ScrFI CCNGG 4 cut(s) 271, 433, 474, 1815
SfaNI GCATC 5 cut(s) 217, 256, 784, 1435, 2133
Sfr274I CTCGAG 1 cut(s) 343
SinI GGWCC 2 cut(s) 826, 1294
SlaI CTCGAG 1 cut(s) 343
SmiMI CAYNNNNRTG 1 cut(s) 2137
SmlI CTYRAG 3 cut(s) 343, 815, 918
SmoI CTYRAG 3 cut(s) 343, 815, 918
SpeI ACTAGT 1 cut(s) 1144
SphI GCATGC 1 cut(s) 1243
SsiI CCGC 2 cut(s) 219, 419
SspI AATATT 3 cut(s) 37, 277, 999
SspMI CTAG 6 cut(s) 21, 638, 957, 984, 1145, 2055
StyD4I CCNGG 4 cut(s) 269, 431, 472, 1813
StyI CCWWGG 2 cut(s) 1367, 1860
TaaI ACNGT 7 cut(s) 13, 31, 291, 570, 736, 1405, 1804
TaiI ACGT 6 cut(s) 412, 546, 761, 1189, 1833, 1954
TaqI TCGA 6 cut(s) 123, 344, 717, 1224, 1570, 1620
TaqII GACCGA 2 cut(s) 677, 843
TfiI GAWTC 5 cut(s) 935, 1108, 1173, 1938, 2187
TscAI CASTG 2 cut(s) 1323, 1809
TseFI GTSAC 4 cut(s) 347, 358, 544, 1831
TseI GCWGC 6 cut(s) 5, 1522, 1577, 1718, 1769, 1796
Tsp45I GTSAC 4 cut(s) 347, 358, 544, 1831
TspRI CASTG 2 cut(s) 1323, 1809
Tth111I GACNNNGTC 1 cut(s) 353
Van91I CCANNNNNTGG 1 cut(s) 1318
Vha464I CTTAAG 1 cut(s) 815
VpaK11BI GGWCC 2 cut(s) 826, 1294
VspI ATTAAT 1 cut(s) 183
XapI RAATTY 8 cut(s) 161, 306, 491, 1227, 1460, 1657, 1685, 1705
XceI RCATGY 3 cut(s) 1243, 1334, 1529
XhoI CTCGAG 1 cut(s) 343
XmiI GTMKAC 2 cut(s) 600, 1024
XspI CTAG 6 cut(s) 21, 638, 957, 984, 1145, 2055
ZraI GACGTC 1 cut(s) 1831
Zsp2I ATGCAT 2 cut(s) 952, 1241
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.