protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 681, 1010 |
| AccI | GTMKAC | 1 cut(s) | 856 |
| AccII | CGCG | 1 cut(s) | 814 |
| AciI | CCGC | 3 cut(s) | 219, 342, 807 |
| AclI | AACGTT | 1 cut(s) | 1144 |
| AcoI | YGGCCR | 1 cut(s) | 735 |
| AcsI | RAATTY | 1 cut(s) | 1076 |
| AcuI | CTGAAG | 1 cut(s) | 159 |
| AcvI | CACGTG | 1 cut(s) | 302 |
| AcyI | GRCGYC | 2 cut(s) | 682, 1011 |
| AfaI | GTAC | 3 cut(s) | 10, 430, 471 |
| AgsI | TTSAA | 4 cut(s) | 295, 482, 709, 1166 |
| AjnI | CCWGG | 3 cut(s) | 36, 188, 649 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 275, 307 |
| AluBI | AGCT | 7 cut(s) | 158, 278, 566, 944, 1001, 1086, 1170 |
| AluI | AGCT | 7 cut(s) | 158, 278, 566, 944, 1001, 1086, 1170 |
| Alw21I | GWGCWC | 1 cut(s) | 331 |
| Alw26I | GTCTC | 1 cut(s) | 80 |
| Ama87I | CYCGRG | 1 cut(s) | 78 |
| AoxI | GGCC | 3 cut(s) | 192, 536, 735 |
| ApeKI | GCWGC | 3 cut(s) | 455, 763, 1086 |
| ApoI | RAATTY | 1 cut(s) | 1076 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 737, 769 |
| AseI | ATTAAT | 2 cut(s) | 666, 836 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 989 |
| AspLEI | GCGC | 3 cut(s) | 656, 684, 1013 |
| AspS9I | GGNCC | 2 cut(s) | 192, 537 |
| AsuC2I | CCSGG | 2 cut(s) | 245, 540 |
| AvaI | CYCGRG | 1 cut(s) | 78 |
| BalI | TGGCCA | 1 cut(s) | 737 |
| BanI | GGYRCC | 2 cut(s) | 681, 1010 |
| BbrPI | CACGTG | 1 cut(s) | 302 |
| BbsI | GAAGAC | 1 cut(s) | 652 |
| Bbv12I | GWGCWC | 1 cut(s) | 331 |
| BbvI | GCAGC | 3 cut(s) | 467, 775, 1073 |
| BccI | CCATC | 1 cut(s) | 928 |
| BceAI | ACGGC | 1 cut(s) | 166 |
| BciT130I | CCWGG | 3 cut(s) | 38, 190, 651 |
| BciVI | GTATCC | 1 cut(s) | 797 |
| BclI | TGATCA | 1 cut(s) | 946 |
| BcnI | CCSGG | 2 cut(s) | 245, 540 |
| BcoDI | GTCTC | 1 cut(s) | 80 |
| BfmI | CTRYAG | 1 cut(s) | 447 |
| BfoI | RGCGCY | 3 cut(s) | 657, 685, 1014 |
| BfuI | GTATCC | 1 cut(s) | 797 |
| BglII | AGATCT | 1 cut(s) | 106 |
| BisI | GCNGC | 5 cut(s) | 342, 456, 764, 808, 1087 |
| BlpI | GCTNAGC | 1 cut(s) | 154 |
| BlsI | GCNGC | 5 cut(s) | 343, 457, 765, 809, 1088 |
| Bme1390I | CCNGG | 5 cut(s) | 38, 190, 245, 540, 651 |
| BmeT110I | CYCGRG | 1 cut(s) | 78 |
| BmgT120I | GGNCC | 2 cut(s) | 192, 537 |
| BmiI | GGNNCC | 3 cut(s) | 132, 683, 1012 |
| BmrFI | CCNGG | 5 cut(s) | 38, 190, 245, 540, 651 |
| BpiI | GAAGAC | 1 cut(s) | 652 |
| BpmI | CTGGAG | 2 cut(s) | 600, 909 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1082 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 154 |
| BpuEI | CTTGAG | 1 cut(s) | 506 |
| BpuMI | CCSGG | 2 cut(s) | 245, 540 |
| BsaAI | YACGTR | 2 cut(s) | 302, 337 |
| BsaHI | GRCGYC | 2 cut(s) | 682, 1011 |
| BsaJI | CCNNGG | 4 cut(s) | 189, 495, 728, 738 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 275, 305 |
| Bse118I | RCCGGY | 1 cut(s) | 1130 |
| Bse1I | ACTGG | 3 cut(s) | 324, 479, 554 |
| BseBI | CCWGG | 3 cut(s) | 38, 190, 651 |
| BseDI | CCNNGG | 4 cut(s) | 189, 495, 728, 738 |
| BseGI | GGATG | 1 cut(s) | 121 |
| BseMII | CTCAG | 3 cut(s) | 168, 216, 646 |
| BseNI | ACTGG | 3 cut(s) | 324, 479, 554 |
| BseXI | GCAGC | 3 cut(s) | 467, 775, 1073 |
| Bsh1236I | CGCG | 1 cut(s) | 814 |
| BshFI | GGCC | 3 cut(s) | 194, 538, 737 |
| BshNI | GGYRCC | 2 cut(s) | 681, 1010 |
| BsiHKAI | GWGCWC | 1 cut(s) | 331 |
| BsiHKCI | CYCGRG | 1 cut(s) | 78 |
| BsiSI | CCGG | 3 cut(s) | 244, 540, 1131 |
| BslFI | GGGAC | 1 cut(s) | 235 |
| BsmAI | GTCTC | 1 cut(s) | 80 |
| BsmFI | GGGAC | 1 cut(s) | 235 |
| BsmI | GAATGC | 1 cut(s) | 190 |
| BsnI | GGCC | 3 cut(s) | 194, 538, 737 |
| BsoBI | CYCGRG | 1 cut(s) | 78 |
| Bsp1286I | GDGCHC | 1 cut(s) | 331 |
| Bsp143I | GATC | 4 cut(s) | 106, 525, 935, 946 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 154 |
| Bsp19I | CCATGG | 3 cut(s) | 495, 728, 738 |
| BspACI | CCGC | 3 cut(s) | 219, 342, 807 |
| BspANI | GGCC | 3 cut(s) | 194, 538, 737 |
| BspCNI | CTCAG | 3 cut(s) | 167, 217, 645 |
| BspFNI | CGCG | 1 cut(s) | 814 |
| BspLI | GGNNCC | 3 cut(s) | 132, 683, 1012 |
| BspQI | GCTCTTC | 1 cut(s) | 336 |
| BspT107I | GGYRCC | 2 cut(s) | 681, 1010 |
| BsrFI | RCCGGY | 1 cut(s) | 1130 |
| BsrI | ACTGG | 3 cut(s) | 324, 479, 554 |
| BssAI | RCCGGY | 1 cut(s) | 1130 |
| BssECI | CCNNGG | 4 cut(s) | 189, 495, 728, 738 |
| BssMI | GATC | 4 cut(s) | 106, 525, 935, 946 |
| BssNAI | GTATAC | 1 cut(s) | 857 |
| BssNI | GRCGYC | 2 cut(s) | 682, 1011 |
| BssT1I | CCWWGG | 3 cut(s) | 495, 728, 738 |
| Bst1107I | GTATAC | 1 cut(s) | 857 |
| Bst2UI | CCWGG | 3 cut(s) | 38, 190, 651 |
| Bst4CI | ACNGT | 5 cut(s) | 16, 99, 898, 1099, 1162 |
| Bst6I | CTCTTC | 1 cut(s) | 336 |
| BstACI | GRCGYC | 2 cut(s) | 682, 1011 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 461, 769 |
| BstBAI | YACGTR | 2 cut(s) | 302, 337 |
| BstC8I | GCNNGC | 3 cut(s) | 201, 267, 812 |
| BstDEI | CTNAG | 5 cut(s) | 154, 225, 436, 632, 1082 |
| BstDSI | CCRYGG | 3 cut(s) | 495, 728, 738 |
| BstF5I | GGATG | 1 cut(s) | 121 |
| BstFNI | CGCG | 1 cut(s) | 814 |
| BstH2I | RGCGCY | 3 cut(s) | 657, 685, 1014 |
| BstHHI | GCGC | 3 cut(s) | 656, 684, 1013 |
| BstKTI | GATC | 4 cut(s) | 109, 528, 938, 949 |
| BstMAI | GTCTC | 1 cut(s) | 80 |
| BstMBI | GATC | 4 cut(s) | 106, 525, 935, 946 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 26, 200, 266, 275, 452, 461, 769 |
| BstNI | CCWGG | 3 cut(s) | 38, 190, 651 |
| BstNSI | RCATGY | 3 cut(s) | 203, 269, 1188 |
| BstSCI | CCNGG | 5 cut(s) | 36, 188, 243, 538, 649 |
| BstSFI | CTRYAG | 1 cut(s) | 447 |
| BstUI | CGCG | 1 cut(s) | 814 |
| BstV1I | GCAGC | 3 cut(s) | 467, 775, 1073 |
| BstV2I | GAAGAC | 1 cut(s) | 652 |
| BstX2I | RGATCY | 1 cut(s) | 106 |
| BstYI | RGATCY | 1 cut(s) | 106 |
| BstZ17I | GTATAC | 1 cut(s) | 857 |
| BsuI | GTATCC | 1 cut(s) | 797 |
| BsuRI | GGCC | 3 cut(s) | 194, 538, 737 |
| BtgI | CCRYGG | 3 cut(s) | 495, 728, 738 |
| BtsCI | GGATG | 1 cut(s) | 121 |
| BtsIMutI | CAGTG | 5 cut(s) | 331, 472, 640, 894, 1158 |
| Cac8I | GCNNGC | 3 cut(s) | 201, 267, 812 |
| CfoI | GCGC | 3 cut(s) | 656, 684, 1013 |
| Cfr10I | RCCGGY | 1 cut(s) | 1130 |
| Cfr13I | GGNCC | 2 cut(s) | 192, 537 |
| Csp6I | GTAC | 3 cut(s) | 9, 429, 470 |
| CviQI | GTAC | 3 cut(s) | 9, 429, 470 |
| DdeI | CTNAG | 5 cut(s) | 154, 225, 436, 632, 1082 |
| DinI | GGCGCC | 2 cut(s) | 683, 1012 |
| DpnI | GATC | 4 cut(s) | 108, 527, 937, 948 |
| DpnII | GATC | 4 cut(s) | 106, 525, 935, 946 |
| EaeI | YGGCCR | 1 cut(s) | 735 |
| Eam1104I | CTCTTC | 1 cut(s) | 336 |
| EarI | CTCTTC | 1 cut(s) | 336 |
| Eco130I | CCWWGG | 3 cut(s) | 495, 728, 738 |
| Eco57I | CTGAAG | 1 cut(s) | 159 |
| Eco72I | CACGTG | 1 cut(s) | 302 |
| Eco88I | CYCGRG | 1 cut(s) | 78 |
| EcoO109I | RGGNCCY | 1 cut(s) | 192 |
| EcoRII | CCWGG | 3 cut(s) | 36, 188, 649 |
| EcoT14I | CCWWGG | 3 cut(s) | 495, 728, 738 |
| EcoT22I | ATGCAT | 2 cut(s) | 31, 271 |
| EgeI | GGCGCC | 2 cut(s) | 683, 1012 |
| EheI | GGCGCC | 2 cut(s) | 683, 1012 |
| ErhI | CCWWGG | 3 cut(s) | 495, 728, 738 |
| FaqI | GGGAC | 1 cut(s) | 235 |
| FauI | CCCGC | 1 cut(s) | 212 |
| FbaI | TGATCA | 1 cut(s) | 946 |
| FblI | GTMKAC | 1 cut(s) | 856 |
| Fnu4HI | GCNGC | 5 cut(s) | 342, 456, 764, 808, 1087 |
| FokI | GGATG | 1 cut(s) | 128 |
| Fsp4HI | GCNGC | 5 cut(s) | 342, 456, 764, 808, 1087 |
| GlaI | GCGC | 3 cut(s) | 655, 683, 1012 |
| GluI | GCNGC | 5 cut(s) | 342, 456, 764, 808, 1087 |
| GsuI | CTGGAG | 2 cut(s) | 600, 909 |
| HaeII | RGCGCY | 3 cut(s) | 657, 685, 1014 |
| HaeIII | GGCC | 3 cut(s) | 194, 538, 737 |
| HapII | CCGG | 3 cut(s) | 244, 540, 1131 |
| HhaI | GCGC | 3 cut(s) | 656, 684, 1013 |
| Hin1I | GRCGYC | 2 cut(s) | 682, 1011 |
| Hin6I | GCGC | 3 cut(s) | 654, 682, 1011 |
| HinP1I | GCGC | 3 cut(s) | 654, 682, 1011 |
| HindIII | AAGCTT | 1 cut(s) | 276 |
| HinfI | GANTC | 4 cut(s) | 478, 905, 964, 1029 |
| HpaII | CCGG | 3 cut(s) | 244, 540, 1131 |
| Hpy166II | GTNNAC | 2 cut(s) | 472, 857 |
| Hpy188I | TCNGA | 5 cut(s) | 904, 910, 960, 995, 1067 |
| Hpy188III | TCNNGA | 6 cut(s) | 137, 523, 617, 881, 926, 939 |
| Hpy8I | GTNNAC | 2 cut(s) | 472, 857 |
| HpyCH4III | ACNGT | 5 cut(s) | 16, 99, 898, 1099, 1162 |
| HpyCH4IV | ACGT | 3 cut(s) | 301, 336, 1144 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 26, 200, 266, 275, 452, 461, 769 |
| HpyF3I | CTNAG | 5 cut(s) | 154, 225, 436, 632, 1082 |
| HpySE526I | ACGT | 3 cut(s) | 301, 336, 1144 |
| Hsp92I | GRCGYC | 2 cut(s) | 682, 1011 |
| HspAI | GCGC | 3 cut(s) | 654, 682, 1011 |
| KasI | GGCGCC | 2 cut(s) | 681, 1010 |
| Ksp22I | TGATCA | 1 cut(s) | 946 |
| Kzo9I | GATC | 4 cut(s) | 106, 525, 935, 946 |
| LguI | GCTCTTC | 1 cut(s) | 336 |
| Lsp1109I | GCAGC | 3 cut(s) | 467, 775, 1073 |
| MaeII | ACGT | 3 cut(s) | 301, 336, 1144 |
| MaeIII | GTNAC | 5 cut(s) | 302, 378, 635, 979, 1093 |
| MalI | GATC | 4 cut(s) | 108, 527, 937, 948 |
| MboI | GATC | 4 cut(s) | 106, 525, 935, 946 |
| MboII | GAAGA | 4 cut(s) | 323, 407, 410, 657 |
| MflI | RGATCY | 1 cut(s) | 106 |
| MhlI | GDGCHC | 1 cut(s) | 331 |
| MlsI | TGGCCA | 1 cut(s) | 737 |
| MluCI | AATT | 5 cut(s) | 204, 544, 833, 1076, 1122 |
| MluNI | TGGCCA | 1 cut(s) | 737 |
| Mly113I | GGCGCC | 2 cut(s) | 682, 1011 |
| MlyI | GAGTC | 1 cut(s) | 958 |
| MnlI | CCTC | 8 cut(s) | 31, 121, 144, 168, 616, 904, 954, 1024 |
| Mox20I | TGGCCA | 1 cut(s) | 737 |
| Mph1103I | ATGCAT | 2 cut(s) | 31, 271 |
| MroXI | GAANNNNTTC | 1 cut(s) | 989 |
| MscI | TGGCCA | 1 cut(s) | 737 |
| MseI | TTAA | 6 cut(s) | 48, 207, 501, 666, 836, 1125 |
| Msp20I | TGGCCA | 1 cut(s) | 737 |
| MspA1I | CMGCKG | 1 cut(s) | 158 |
| MspI | CCGG | 3 cut(s) | 244, 540, 1131 |
| MspR9I | CCNGG | 5 cut(s) | 38, 190, 245, 540, 651 |
| Mva1269I | GAATGC | 1 cut(s) | 190 |
| MvaI | CCWGG | 3 cut(s) | 38, 190, 651 |
| MvnI | CGCG | 1 cut(s) | 814 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 26, 200, 266, 275, 452, 461, 769 |
| NarI | GGCGCC | 2 cut(s) | 682, 1011 |
| NciI | CCSGG | 2 cut(s) | 245, 540 |
| NcoI | CCATGG | 3 cut(s) | 495, 728, 738 |
| NdeII | GATC | 4 cut(s) | 106, 525, 935, 946 |
| NlaIV | GGNNCC | 3 cut(s) | 132, 683, 1012 |
| NmuCI | GTSAC | 2 cut(s) | 302, 635 |
| NsiI | ATGCAT | 2 cut(s) | 31, 271 |
| NspI | RCATGY | 3 cut(s) | 203, 269, 1188 |
| PaeI | GCATGC | 2 cut(s) | 203, 269 |
| PciSI | GCTCTTC | 1 cut(s) | 336 |
| PctI | GAATGC | 1 cut(s) | 190 |
| PdmI | GAANNNNTTC | 1 cut(s) | 989 |
| PfeI | GAWTC | 3 cut(s) | 478, 905, 1029 |
| PfoI | TCCNGGA | 2 cut(s) | 36, 243 |
| PkrI | GCNGC | 5 cut(s) | 343, 457, 765, 809, 1088 |
| PleI | GAGTC | 1 cut(s) | 958 |
| PluTI | GGCGCC | 2 cut(s) | 685, 1014 |
| PmaCI | CACGTG | 1 cut(s) | 302 |
| PmlI | CACGTG | 1 cut(s) | 302 |
| PpsI | GAGTC | 1 cut(s) | 958 |
| Ppu21I | YACGTR | 2 cut(s) | 302, 337 |
| PshBI | ATTAAT | 2 cut(s) | 666, 836 |
| Psp1406I | AACGTT | 1 cut(s) | 1144 |
| Psp6I | CCWGG | 3 cut(s) | 36, 188, 649 |
| PspCI | CACGTG | 1 cut(s) | 302 |
| PspGI | CCWGG | 3 cut(s) | 36, 188, 649 |
| PspN4I | GGNNCC | 3 cut(s) | 132, 683, 1012 |
| PspPI | GGNCC | 2 cut(s) | 192, 537 |
| PsuI | RGATCY | 1 cut(s) | 106 |
| PvuII | CAGCTG | 1 cut(s) | 158 |
| RsaI | GTAC | 3 cut(s) | 10, 430, 471 |
| RsaNI | GTAC | 3 cut(s) | 9, 429, 470 |
| SapI | GCTCTTC | 1 cut(s) | 336 |
| SaqAI | TTAA | 6 cut(s) | 48, 207, 501, 666, 836, 1125 |
| SatI | GCNGC | 5 cut(s) | 342, 456, 764, 808, 1087 |
| Sau3AI | GATC | 4 cut(s) | 106, 525, 935, 946 |
| Sau96I | GGNCC | 2 cut(s) | 192, 537 |
| SchI | GAGTC | 1 cut(s) | 958 |
| ScrFI | CCNGG | 5 cut(s) | 38, 190, 245, 540, 651 |
| SduI | GDGCHC | 1 cut(s) | 331 |
| SfcI | CTRYAG | 1 cut(s) | 447 |
| SfoI | GGCGCC | 2 cut(s) | 683, 1012 |
| SmlI | CTYRAG | 1 cut(s) | 521 |
| SmoI | CTYRAG | 1 cut(s) | 521 |
| SphI | GCATGC | 2 cut(s) | 203, 269 |
| Sse9I | AATT | 5 cut(s) | 204, 544, 833, 1076, 1122 |
| SsiI | CCGC | 3 cut(s) | 219, 342, 807 |
| SspDI | GGCGCC | 2 cut(s) | 681, 1010 |
| StyD4I | CCNGG | 5 cut(s) | 36, 188, 243, 538, 649 |
| StyI | CCWWGG | 3 cut(s) | 495, 728, 738 |
| TaaI | ACNGT | 5 cut(s) | 16, 99, 898, 1099, 1162 |
| TaiI | ACGT | 3 cut(s) | 304, 339, 1147 |
| TaqI | TCGA | 1 cut(s) | 574 |
| TasI | AATT | 5 cut(s) | 204, 544, 833, 1076, 1122 |
| TatI | WGTACW | 1 cut(s) | 469 |
| TauI | GCSGC | 2 cut(s) | 344, 810 |
| TfiI | GAWTC | 3 cut(s) | 478, 905, 1029 |
| Tru1I | TTAA | 6 cut(s) | 48, 207, 501, 666, 836, 1125 |
| Tru9I | TTAA | 6 cut(s) | 48, 207, 501, 666, 836, 1125 |
| TscAI | CASTG | 5 cut(s) | 331, 479, 640, 901, 1165 |
| TseFI | GTSAC | 2 cut(s) | 302, 635 |
| TseI | GCWGC | 3 cut(s) | 455, 763, 1086 |
| Tsp45I | GTSAC | 2 cut(s) | 302, 635 |
| TspDTI | ATGAA | 4 cut(s) | 323, 362, 425, 1064 |
| TspGWI | ACGGA | 2 cut(s) | 366, 765 |
| TspRI | CASTG | 5 cut(s) | 331, 479, 640, 901, 1165 |
| VspI | ATTAAT | 2 cut(s) | 666, 836 |
| XapI | RAATTY | 1 cut(s) | 1076 |
| XceI | RCATGY | 3 cut(s) | 203, 269, 1188 |
| XmiI | GTMKAC | 1 cut(s) | 856 |
| XmnI | GAANNNNTTC | 1 cut(s) | 989 |
| Zsp2I | ATGCAT | 2 cut(s) | 31, 271 |