protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 161 - 271 | 1.3e-23 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 922, 956 |
| Acc36I | ACCTGC | 1 cut(s) | 388 |
| Acc65I | GGTACC | 1 cut(s) | 376 |
| AccB1I | GGYRCC | 1 cut(s) | 376 |
| AccI | GTMKAC | 1 cut(s) | 926 |
| AciI | CCGC | 1 cut(s) | 973 |
| AclWI | GGATC | 1 cut(s) | 845 |
| AcsI | RAATTY | 1 cut(s) | 186 |
| AfaI | GTAC | 3 cut(s) | 378, 505, 596 |
| AgsI | TTSAA | 2 cut(s) | 350, 864 |
| AjnI | CCWGG | 2 cut(s) | 559, 937 |
| AluBI | AGCT | 1 cut(s) | 62 |
| AluI | AGCT | 1 cut(s) | 62 |
| Alw21I | GWGCWC | 1 cut(s) | 520 |
| Alw26I | GTCTC | 2 cut(s) | 212, 908 |
| AlwI | GGATC | 1 cut(s) | 845 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 560 |
| Ama87I | CYCGRG | 1 cut(s) | 209 |
| AoxI | GGCC | 2 cut(s) | 4, 145 |
| ApeKI | GCWGC | 1 cut(s) | 59 |
| ApoI | RAATTY | 1 cut(s) | 186 |
| Asp718I | GGTACC | 1 cut(s) | 376 |
| AspS9I | GGNCC | 2 cut(s) | 4, 935 |
| AsuHPI | GGTGA | 1 cut(s) | 520 |
| AvaI | CYCGRG | 1 cut(s) | 209 |
| AvaII | GGWCC | 1 cut(s) | 935 |
| BaeGI | GKGCMC | 1 cut(s) | 805 |
| BanI | GGYRCC | 1 cut(s) | 376 |
| Bbv12I | GWGCWC | 1 cut(s) | 520 |
| BbvI | GCAGC | 1 cut(s) | 71 |
| BccI | CCATC | 3 cut(s) | 173, 539, 778 |
| BceAI | ACGGC | 1 cut(s) | 507 |
| BciT130I | CCWGG | 2 cut(s) | 561, 939 |
| BcoDI | GTCTC | 2 cut(s) | 212, 908 |
| BfmI | CTRYAG | 2 cut(s) | 63, 543 |
| BfuAI | ACCTGC | 1 cut(s) | 388 |
| BisI | GCNGC | 1 cut(s) | 60 |
| BlsI | GCNGC | 1 cut(s) | 61 |
| Bme1390I | CCNGG | 2 cut(s) | 561, 939 |
| Bme18I | GGWCC | 1 cut(s) | 935 |
| BmeT110I | CYCGRG | 1 cut(s) | 209 |
| BmgT120I | GGNCC | 2 cut(s) | 4, 935 |
| BmiI | GGNNCC | 1 cut(s) | 378 |
| BmrFI | CCNGG | 2 cut(s) | 561, 939 |
| BmsI | GCATC | 1 cut(s) | 882 |
| BpmI | CTGGAG | 1 cut(s) | 276 |
| BsaI | GGTCTC | 1 cut(s) | 212 |
| BsaJI | CCNNGG | 1 cut(s) | 965 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 234, 264 |
| Bse1I | ACTGG | 3 cut(s) | 293, 590, 872 |
| BseBI | CCWGG | 2 cut(s) | 561, 939 |
| BseDI | CCNNGG | 1 cut(s) | 965 |
| BseGI | GGATG | 1 cut(s) | 897 |
| BseMII | CTCAG | 1 cut(s) | 839 |
| BseNI | ACTGG | 3 cut(s) | 293, 590, 872 |
| BseSI | GKGCMC | 1 cut(s) | 805 |
| BseXI | GCAGC | 1 cut(s) | 71 |
| BshFI | GGCC | 2 cut(s) | 6, 147 |
| BshNI | GGYRCC | 1 cut(s) | 376 |
| BsiHKAI | GWGCWC | 1 cut(s) | 520 |
| BsiHKCI | CYCGRG | 1 cut(s) | 209 |
| BslFI | GGGAC | 1 cut(s) | 502 |
| BsmAI | GTCTC | 2 cut(s) | 212, 908 |
| BsmFI | GGGAC | 1 cut(s) | 502 |
| BsmI | GAATGC | 2 cut(s) | 548, 585 |
| BsnI | GGCC | 2 cut(s) | 6, 147 |
| Bso31I | GGTCTC | 1 cut(s) | 212 |
| BsoBI | CYCGRG | 1 cut(s) | 209 |
| Bsp1286I | GDGCHC | 2 cut(s) | 520, 805 |
| Bsp1407I | TGTACA | 2 cut(s) | 503, 594 |
| Bsp143I | GATC | 2 cut(s) | 837, 909 |
| BspACI | CCGC | 1 cut(s) | 973 |
| BspANI | GGCC | 2 cut(s) | 6, 147 |
| BspCNI | CTCAG | 1 cut(s) | 840 |
| BspLI | GGNNCC | 1 cut(s) | 378 |
| BspMI | ACCTGC | 1 cut(s) | 388 |
| BspPI | GGATC | 1 cut(s) | 845 |
| BspQI | GCTCTTC | 1 cut(s) | 254 |
| BspT107I | GGYRCC | 1 cut(s) | 376 |
| BspTNI | GGTCTC | 1 cut(s) | 212 |
| BsrGI | TGTACA | 2 cut(s) | 503, 594 |
| BsrI | ACTGG | 3 cut(s) | 293, 590, 872 |
| BssECI | CCNNGG | 1 cut(s) | 965 |
| BssMI | GATC | 2 cut(s) | 837, 909 |
| BssT1I | CCWWGG | 1 cut(s) | 965 |
| Bst2UI | CCWGG | 2 cut(s) | 561, 939 |
| Bst4CI | ACNGT | 5 cut(s) | 231, 250, 508, 556, 575 |
| Bst6I | CTCTTC | 1 cut(s) | 254 |
| BstAUI | TGTACA | 2 cut(s) | 503, 594 |
| BstC8I | GCNNGC | 1 cut(s) | 266 |
| BstDEI | CTNAG | 2 cut(s) | 255, 848 |
| BstF5I | GGATG | 1 cut(s) | 897 |
| BstKTI | GATC | 2 cut(s) | 840, 912 |
| BstMAI | GTCTC | 2 cut(s) | 212, 908 |
| BstMBI | GATC | 2 cut(s) | 837, 909 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 776 |
| BstNI | CCWGG | 2 cut(s) | 561, 939 |
| BstNSI | RCATGY | 3 cut(s) | 80, 268, 282 |
| BstSCI | CCNGG | 2 cut(s) | 559, 937 |
| BstSFI | CTRYAG | 2 cut(s) | 63, 543 |
| BstSLI | GKGCMC | 1 cut(s) | 805 |
| BstV1I | GCAGC | 1 cut(s) | 71 |
| BsuRI | GGCC | 2 cut(s) | 6, 147 |
| BtsCI | GGATG | 1 cut(s) | 897 |
| BtsIMutI | CAGTG | 4 cut(s) | 255, 580, 597, 879 |
| BveI | ACCTGC | 1 cut(s) | 388 |
| Cac8I | GCNNGC | 1 cut(s) | 266 |
| CaiI | CAGNNNCTG | 1 cut(s) | 560 |
| Cfr13I | GGNCC | 2 cut(s) | 4, 935 |
| Csp6I | GTAC | 3 cut(s) | 377, 504, 595 |
| CviJI | RGCY | 5 cut(s) | 6, 62, 147, 304, 770 |
| CviKI_1 | RGCY | 5 cut(s) | 6, 62, 147, 304, 770 |
| CviQI | GTAC | 3 cut(s) | 377, 504, 595 |
| DdeI | CTNAG | 2 cut(s) | 255, 848 |
| DpnI | GATC | 2 cut(s) | 839, 911 |
| DpnII | GATC | 2 cut(s) | 837, 909 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 922, 956 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 922, 956 |
| Eam1104I | CTCTTC | 1 cut(s) | 254 |
| EarI | CTCTTC | 1 cut(s) | 254 |
| Eco130I | CCWWGG | 1 cut(s) | 965 |
| Eco147I | AGGCCT | 1 cut(s) | 147 |
| Eco31I | GGTCTC | 1 cut(s) | 212 |
| Eco47I | GGWCC | 1 cut(s) | 935 |
| Eco88I | CYCGRG | 1 cut(s) | 209 |
| EcoRII | CCWGG | 2 cut(s) | 559, 937 |
| EcoT14I | CCWWGG | 1 cut(s) | 965 |
| ErhI | CCWWGG | 1 cut(s) | 965 |
| FaqI | GGGAC | 1 cut(s) | 502 |
| FblI | GTMKAC | 1 cut(s) | 926 |
| Fnu4HI | GCNGC | 1 cut(s) | 60 |
| FokI | GGATG | 1 cut(s) | 904 |
| Fsp4HI | GCNGC | 1 cut(s) | 60 |
| GluI | GCNGC | 1 cut(s) | 60 |
| GsuI | CTGGAG | 1 cut(s) | 276 |
| HaeIII | GGCC | 2 cut(s) | 6, 147 |
| HinfI | GANTC | 2 cut(s) | 19, 684 |
| HphI | GGTGA | 1 cut(s) | 520 |
| Hpy166II | GTNNAC | 2 cut(s) | 595, 927 |
| Hpy188I | TCNGA | 2 cut(s) | 634, 849 |
| Hpy188III | TCNNGA | 3 cut(s) | 209, 907, 913 |
| Hpy8I | GTNNAC | 2 cut(s) | 595, 927 |
| HpyCH4III | ACNGT | 5 cut(s) | 231, 250, 508, 556, 575 |
| HpyCH4IV | ACGT | 1 cut(s) | 697 |
| HpyCH4V | TGCA | 7 cut(s) | 278, 323, 331, 337, 463, 704, 895 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 776 |
| HpyF3I | CTNAG | 2 cut(s) | 255, 848 |
| HpySE526I | ACGT | 1 cut(s) | 697 |
| KpnI | GGTACC | 1 cut(s) | 380 |
| Kzo9I | GATC | 2 cut(s) | 837, 909 |
| LguI | GCTCTTC | 1 cut(s) | 254 |
| Lsp1109I | GCAGC | 1 cut(s) | 71 |
| LweI | GCATC | 1 cut(s) | 882 |
| MaeII | ACGT | 1 cut(s) | 697 |
| MaeIII | GTNAC | 3 cut(s) | 526, 575, 787 |
| MalI | GATC | 2 cut(s) | 839, 911 |
| MboI | GATC | 2 cut(s) | 837, 909 |
| MboII | GAAGA | 4 cut(s) | 227, 271, 645, 836 |
| MhlI | GDGCHC | 2 cut(s) | 520, 805 |
| MluCI | AATT | 3 cut(s) | 186, 412, 669 |
| MlyI | GAGTC | 1 cut(s) | 28 |
| MnlI | CCTC | 7 cut(s) | 158, 205, 236, 460, 698, 889, 912 |
| MseI | TTAA | 3 cut(s) | 42, 357, 458 |
| MslI | CAYNNNNRTG | 3 cut(s) | 533, 590, 737 |
| MspR9I | CCNGG | 2 cut(s) | 561, 939 |
| Mva1269I | GAATGC | 2 cut(s) | 548, 585 |
| MvaI | CCWGG | 2 cut(s) | 561, 939 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 776 |
| NdeII | GATC | 2 cut(s) | 837, 909 |
| NlaIV | GGNNCC | 1 cut(s) | 378 |
| NmuCI | GTSAC | 3 cut(s) | 526, 575, 787 |
| NspI | RCATGY | 3 cut(s) | 80, 268, 282 |
| PaeI | GCATGC | 1 cut(s) | 268 |
| PaeR7I | CTCGAG | 1 cut(s) | 209 |
| PceI | AGGCCT | 1 cut(s) | 147 |
| PciSI | GCTCTTC | 1 cut(s) | 254 |
| PctI | GAATGC | 2 cut(s) | 548, 585 |
| PfeI | GAWTC | 1 cut(s) | 684 |
| PkrI | GCNGC | 1 cut(s) | 61 |
| PleI | GAGTC | 1 cut(s) | 27 |
| PpsI | GAGTC | 1 cut(s) | 27 |
| Psp6I | CCWGG | 2 cut(s) | 559, 937 |
| PspGI | CCWGG | 2 cut(s) | 559, 937 |
| PspN4I | GGNNCC | 1 cut(s) | 378 |
| PspPI | GGNCC | 2 cut(s) | 4, 935 |
| PstNI | CAGNNNCTG | 1 cut(s) | 560 |
| RsaI | GTAC | 3 cut(s) | 378, 505, 596 |
| RsaNI | GTAC | 3 cut(s) | 377, 504, 595 |
| RseI | CAYNNNNRTG | 3 cut(s) | 533, 590, 737 |
| SapI | GCTCTTC | 1 cut(s) | 254 |
| SaqAI | TTAA | 3 cut(s) | 42, 357, 458 |
| SatI | GCNGC | 1 cut(s) | 60 |
| Sau3AI | GATC | 2 cut(s) | 837, 909 |
| Sau96I | GGNCC | 2 cut(s) | 4, 935 |
| SchI | GAGTC | 1 cut(s) | 28 |
| ScrFI | CCNGG | 2 cut(s) | 561, 939 |
| SduI | GDGCHC | 2 cut(s) | 520, 805 |
| SetI | ASST | 7 cut(s) | 37, 64, 322, 382, 700, 751, 967 |
| SfaNI | GCATC | 1 cut(s) | 882 |
| SfcI | CTRYAG | 2 cut(s) | 63, 543 |
| Sfr274I | CTCGAG | 1 cut(s) | 209 |
| SinI | GGWCC | 1 cut(s) | 935 |
| SlaI | CTCGAG | 1 cut(s) | 209 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 533, 590, 737 |
| SmlI | CTYRAG | 1 cut(s) | 209 |
| SmoI | CTYRAG | 1 cut(s) | 209 |
| SphI | GCATGC | 1 cut(s) | 268 |
| Sse9I | AATT | 3 cut(s) | 186, 412, 669 |
| SseBI | AGGCCT | 1 cut(s) | 147 |
| SsiI | CCGC | 1 cut(s) | 973 |
| SspI | AATATT | 2 cut(s) | 830, 945 |
| StuI | AGGCCT | 1 cut(s) | 147 |
| StyD4I | CCNGG | 2 cut(s) | 559, 937 |
| StyI | CCWWGG | 1 cut(s) | 965 |
| TaaI | ACNGT | 5 cut(s) | 231, 250, 508, 556, 575 |
| TaiI | ACGT | 1 cut(s) | 700 |
| TaqI | TCGA | 3 cut(s) | 168, 210, 912 |
| TasI | AATT | 3 cut(s) | 186, 412, 669 |
| TatI | WGTACW | 2 cut(s) | 503, 594 |
| TfiI | GAWTC | 1 cut(s) | 684 |
| Tru1I | TTAA | 3 cut(s) | 42, 357, 458 |
| Tru9I | TTAA | 3 cut(s) | 42, 357, 458 |
| TscAI | CASTG | 4 cut(s) | 255, 580, 597, 879 |
| TseFI | GTSAC | 3 cut(s) | 526, 575, 787 |
| TseI | GCWGC | 1 cut(s) | 59 |
| Tsp45I | GTSAC | 3 cut(s) | 526, 575, 787 |
| TspDTI | ATGAA | 7 cut(s) | 150, 444, 497, 604, 809, 822, 910 |
| TspRI | CASTG | 4 cut(s) | 255, 580, 597, 879 |
| VpaK11BI | GGWCC | 1 cut(s) | 935 |
| XapI | RAATTY | 1 cut(s) | 186 |
| XceI | RCATGY | 3 cut(s) | 80, 268, 282 |
| XhoI | CTCGAG | 1 cut(s) | 209 |
| XmiI | GTMKAC | 1 cut(s) | 926 |