Rorug02G0491900

Domain of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000027
Physical Location & Seq
Forward (+)
62114560 .. 62120072
5513 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0491900.1

Sequence Viewer

Length: 2190 bp
ATGGTGAGGAAGCATGGATGGCAATTGCCTGCTCACACCTTTCAGGTTGTCGCAATTACCGTATTTTGCTTGTTAGTGGTCGCATTCTATGCTTTCTTTGCTCCTTTCCTTGGAGGCCGCATCTGGGAATATGTTCTGATTGGAAGTTACTCTCCGGTGGCACTTCTTGTCTTTATTCTCTATGTACGATGTACTGCAATAAACCCTGCAGATCCTGGAATTATGTCCAGGTTTTACAATGGGGTAACCAATAGTTTTAATGCAAATCATGGGCTATCAGCAAAAGACCTGCCAAGAAAATTTGATGACGGTGCAACTGGAGCCTCTTCTCCATCATCAGTCTCCAGAAGTTCAATAGCAGGAGCTAACTCTAGTAGGAAAGGCTCAGTAGGAGATCTAGGTGTAAATATTCCAGCTGAACCAACAGCCAACAGCGTTGGAGGAGTTGGAATCTTATGTGCCTTGTTTGTACATCAAGATTGCCGCAAACAACAGGAAGGGGCAGCTGAGCATCAGGGTGGTGAAGGTGGTGAAGAGGCTTTGTTCTGTACATTGTGCAATTCTGAGGTTCGCAAGTTCAGCAAACACTGTAGAAGTTGTGATAAGTGTGTTGACGGTTTTGATCACCACTGTCGGTGGCTTAACAATTGCGTGGGGCACAAAAATTATGTGACTTTTATAAGCCTGATGGCCATCAGTCTTGTTTGGCTTGCTATTGAAGCTGGAGTTGGTATTGCTGTACTAGTGCGCTGCTTTGTTAACAAGAGAAGCATGGAGGCAGAAATTATTGATAGACTTGGAAATGGTTTTACTCGTGCGCCATTTGCAACAGTTGTGGCTATTTGTACTGCAGTTTCTATTCTGGCATGTGTACCCCTCAGTGAACTGTTTTTCTTCCACATGATATTAATCAGGAAGGGTATTACTACCTACGAATATGTTGTGGCAATGAGAGCAATGAGTGAGGCACCCGGAGGAGATGTGGATGAGGCTATCAATAATATCATGTACTCACCAACTGGATCAGCTACAACCGGCTTGAGTGGTGGAAGTTCTTTAGGTCTGCAATACAAGGGTGCATGGTGTACCCCTCCAAGAGTATTTGTGGATTATCAGGATGAAGTTGTACCACATTTGGAGCCTGGAATGGTCCCATCAACTATTGATCCAGATGCAGCTGGAACTACAGAAAGAGAGCAAAAAGCTCCAAAAAGGCCTGTTCGTATTAGTGCTTGGAAGCTTGCAAAGCTAGACTCCAATGAGGCCATGAGAGCAGCAGCCAAAGCCAGGGCTTCATCCTCGGTTCTACGACCACTTGATAAACCTGATCATGAGCGTAGCTCAAGTGGCAATATGAGTGTGAGGAGTAGTGTAAGCACTGATACTGGGACAAATAGAGAGATGAAGAATGATCTGAGGTTGTCAAGAAACTCTTATGCGCCAAGTCAAGGTAGCCGAGATGAGTATGAAACTGGAACTCAAAGCATAAGTAGCTTCAGTAGTCCAAGCCATATTCATGAAGCAGTCACACTTAGCCCTCTACCACAGGGTCAAGGTCTTGGTCCTCTGGGACGTTTCAGTGCAGCCACTTCAGTCCCCAGCTTAGTTCCTGAACGTCCATTACCTTCCAGGACAACATTCCCCAATGTCAATCAGACAATGTCACAGCCCTTGGGATTTGATGAAAAGATAATACAGAAGGGTAGTACTGATCCTATGATGCTTTCTGGTCCACCTACTTCTCTTCTCAGAGACGTCAGAAGGACATCAGTTGTTTGGGACCAAGAAGCCGGAAGATATGTCTCAGTTCCTGTATCGGCTTCTGAAGCTCGAAACAATAGGTCATCCGTTCCAGGATTATCAAATCCTAATGCAGAAACAAGCAATCTTAGAAGGCCAGTTATTCCGCCACAGGAGGCTTCATCTTCCGCAGCGAAGCCTCCAGTGCAACAAACAGAGAAACTGATGTACACGGGAGACTCCATATTCTTTGGCGGTCCACTTTTAAGTGCACCAGTTAGGGATAATTTGAGAAATGAAAGGAGTTCGGGTTCAAGAGAAGGCCAAGAGAGGGCAGCACTGAACTTGCCTAGGGAGTCTAGATTCAGACGTGATTCTGCGTCAAACCAGCTTCCTGTGTTTGTCCCAGGGGGATTTGAGCAAAACCCTAATTTCGGGTCCGGTAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 DUF4219 PGG

Protein Analysis

729

Amino Acids

78.69

Weight (kDa)

8.71

Isoelectric Point (pI)

56.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DHHC PF01529 179 - 314 1.1e-31 DHHC palmitoyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000027)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18670 AT3G18670 AT3G54065
fragaria_vesca FvH4_1g26570 FvH4_1g26570 FvH4_5g19270 FvH4_5g19273 FvH4_5g35840 FvH4_5g36340 FvH4_5g36630 FvH4_5g37181 FvH4_5g37182 FvH4_5g37185 FvH4_5g37240 FvH4_5g37260 FvH4_6g21440 FvH4_6g44571 FvH4_6g44572 FvH4_6g44610 FvH4_6g44620 FvH4_6g44650 FvH4_6g44660 FvH4_6g45151 FvH4_6g45152 FvH4_6g45152 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45154 FvH4_6g51440 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090
malus_domestica MD00G1010300.v1.1 MD00G1010400.v1.1 MD00G1010500.v1.1 MD00G1011000.v1.1 MD00G1011200.v1.1 MD00G1011500.v1.1 MD00G1011900.v1.1 MD03G1133900.v1.1 MD03G1134100.v1.1 MD09G1086300.v1.1 MD09G1086500.v1.1 MD09G1086900.v1.1 MD09G1087000.v1.1 MD09G1088000.v1.1 MD09G1088100.v1.1 MD09G1088200.v1.1 MD09G1088300.v1.1 MD09G1089000.v1.1 MD09G1089300.v1.1 MD09G1133800.v1.1 MD16G1219400.v1.1 MD17G1027900.v1.1 MD17G1028400.v1.1 MD17G1028600.v1.1 MD17G1028700.v1.1 MD17G1028900.v1.1 MD17G1029000.v1.1 MD17G1029100.v1.1 MD17G1029200.v1.1 MD17G1075400.v1.1 MD17G1076000.v1.1 MD17G1077000.v1.1 MD17G1077100.v1.1 MD17G1077800.v1.1 MD17G1078000.v1.1 MD17G1078100.v1.1 MD17G1078300.v1.1 MD17G1100900.v1.1 MD17G1101100.v1.1 MD17G1101400.v1.1 MD17G1104200.v1.1 MD17G1104500.v1.1 MD17G1121300.v1.1 MD17G1121600.v1.1 MD17G1121900.v1.1 MD17G1122700.v1.1 MD17G1218800.v1.1
prunus_persica Prupe.2G033800_v2.0.a1 Prupe.2G033900_v2.0.a1 Prupe.2G080300_v2.0.a1 Prupe.2G080700_v2.0.a1 Prupe.2G080900_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G082000_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082200_v2.0.a1 Prupe.2G082300_v2.0.a1 Prupe.2G082700_v2.0.a1 Prupe.2G082800_v2.0.a1 Prupe.2G082900_v2.0.a1 Prupe.3G235600_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236800_v2.0.a1 Prupe.3G237000_v2.0.a1 Prupe.3G237100_v2.0.a1 Prupe.3G237300_v2.0.a1 Prupe.3G237400_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.4G282500_v2.0.a1 Prupe.4G282500_v2.0.a1
pyrus_communis pycom03g08990 pycom03g09000 pycom09g01180 pycom09g01190 pycom09g01220 pycom09g01230 pycom09g01360 pycom09g01370 pycom09g01380 pycom09g01410 pycom09g05500 pycom11g10280 pycom11g10290 pycom11g10310 pycom16g18270 pycom16g18280 pycom17g02280 pycom17g02290 pycom17g02300 pycom17g02360 pycom17g02390 pycom17g02410 pycom17g02440 pycom17g02460 pycom17g02470 pycom17g02480 pycom17g02510 pycom17g02530 pycom17g02540 pycom17g02550 pycom17g02560 pycom17g02570 pycom17g02580 pycom17g02630 pycom17g02640 pycom17g04970 pycom17g04980 pycom17g05010 pycom17g07090 pycom17g07620 pycom17g07630 pycom17g07640 pycom17g07650 pycom17g07660 pycom17g07740 pycom17g07760 pycom17g07770 pycom17g09580 pycom17g11170 pycom17g11200 pycom17g11220 pycom17g11240 pycom17g11250 pycom17g11300 pycom17g11340 pycom17g11380 pycom17g11440
rosa_chinensis RchiOBHm_Chr1g0332901 RchiOBHm_Chr1g0338981 RchiOBHm_Chr1g0338991 RchiOBHm_Chr1g0341201 RchiOBHm_Chr1g0341211 RchiOBHm_Chr1g0342721 RchiOBHm_Chr1g0343191 RchiOBHm_Chr2g0146761 RchiOBHm_Chr2g0161791 RchiOBHm_Chr2g0161801 RchiOBHm_Chr2g0161841 RchiOBHm_Chr2g0162041 RchiOBHm_Chr2g0162651 RchiOBHm_Chr2g0162691 RchiOBHm_Chr2g0162701 RchiOBHm_Chr2g0162711 RchiOBHm_Chr2g0162721 RchiOBHm_Chr2g0162811 RchiOBHm_Chr2g0162831 RchiOBHm_Chr2g0162841 RchiOBHm_Chr4g0416381 RchiOBHm_Chr4g0416391 RchiOBHm_Chr5g0075981 RchiOBHm_Chr6g0276101 RchiOBHm_Chr7g0214581 RchiOBHm_Chr7g0214631 RchiOBHm_Chr7g0214651 RchiOBHm_Chr7g0214721 RchiOBHm_Chr7g0223161 RchiOBHm_Chr7g0230661 RchiOBHm_Chr7g0230751 RchiOBHm_Chr7g0230781 RchiOBHm_Chr7g0234581 RchiOBHm_Chr7g0234601 RchiOBHm_Chr7g0237561 RchiOBHm_Chr7g0237571 RchiOBHm_Chr7g0238781 RchiOBHm_Chr7g0238811 RchiOBHm_Chr7g0242161 RchiOBHm_Chr7g0242401 RchiOBHm_Chr7g0242451 RchiOBHm_Chr7g0242921 RchiOBHm_Chr7g0242981 RchiOBHm_Chr7g0243111 RchiOBHm_Chr7g0243251 RchiOBHm_Chr7g0243331
rosa_laevigata RLG00000000803 RLG00000000807 RLG00000000809 RLG00000000811 RLG00000000814 RLG00000000854 RLG00000000859 RLG00000000864 RLG00000000994 RLG00000000995 RLG00000001458 RLG00000001461 RLG00000001474 RLG00000001476 RLG00000002729 RLG00000002730 RLG00000003505 RLG00000008871 RLG00000008873 RLG00000018513 RLG00000021300 RLG00000021303 RLG00000021318 RLG00000021356 RLG00000021357 RLG00000029070 RLG00000029071 RLG00000029171 RLG00000029189 RLG00000029190 RLG00000029640 RLG00000034635
rosa_multiflora Rmu_co8149086.1_g000001 Rmu_co8460577.1_g000001 Rmu_sc0000429.1_g000062 Rmu_sc0000429.1_g000071 Rmu_sc0000429.1_g000081 Rmu_sc0000863.1_g000020 Rmu_sc0001488.1_g000011 Rmu_sc0001545.1_g000007 Rmu_sc0001849.1_g000068 Rmu_sc0001993.1_g000003 Rmu_sc0002222.1_g000002 Rmu_sc0002308.1_g000053 Rmu_sc0002308.1_g000069 Rmu_sc0002480.1_g000007 Rmu_sc0003179.1_g000041 Rmu_sc0004213.1_g000011 Rmu_sc0007101.1_g000012 Rmu_sc0008565.1_g000011 Rmu_sc0009298.1_g000003 Rmu_sc0010407.1_g000009 Rmu_sc0010407.1_g000013 Rmu_sc0026966.1_g000004 Rmu_ssc0000152.1_g000012 Rmu_ssc0000152.1_g000014 Rmu_ssc0000295.1_g000021 Rmu_ssc0000295.1_g000026
rosa_roxburghii Rroxscaffold_1G00029600 Rroxscaffold_2G00087790 Rroxscaffold_2G00087800 Rroxscaffold_2G00088360 Rroxscaffold_2G00088500 Rroxscaffold_2G00088530 Rroxscaffold_2G00088590 Rroxscaffold_3G00221570 Rroxscaffold_3G00222190 Rroxscaffold_3G00222240 Rroxscaffold_3G00222880 Rroxscaffold_3G00222900 Rroxscaffold_3G00223990 Rroxscaffold_3G00229750 Rroxscaffold_3G00229760 Rroxscaffold_3G00245140 Rroxscaffold_3G00245150 Rroxscaffold_3G00245200 Rroxscaffold_3G00253520 Rroxscaffold_3G00253530 Rroxscaffold_4G00294500 Rroxscaffold_4G00311800 Rroxscaffold_4G00311830 Rroxscaffold_4G00311850 Rroxscaffold_4G00313180 Rroxscaffold_4G00313210 Rroxscaffold_4G00316270 Rroxscaffold_4G00317910 Rroxscaffold_4G00317920 Rroxscaffold_5G00349290 Rroxscaffold_5G00349300 Rroxscaffold_5G00349310 Rroxscaffold_5G00351950 Rroxscaffold_5G00351960 Rroxscaffold_5G00353390 Rroxscaffold_7G00192540
rosa_rugosa Rorug01G0102500 Rorug01G0102600 Rorug01G0146400.1 Rorug01G0146500.1 Rorug01G0159400.1 Rorug01G0159500.1 Rorug02G0491900 Rorug02G0492000 Rorug02G0492100 Rorug02G0492200 Rorug02G0492300 Rorug02G0492400 Rorug02G0492500 Rorug02G0492700 Rorug02G0498500 Rorug02G0498600 Rorug02G0498800 Rorug04G0006900 Rorug04G0053700 Rorug06G0002000 Rorug06G0002100 Rorug07G0304700 Rorug07G0304800 Rorug07G0304800 Rorug07G0304800 Rorug07G0305300 Rorug07G0305400 Rorug07G0305500 Rorug07G0305500 Rorug07G0318300 Rorug07G0318600 Rorug07G0323600
rosa_samantha Rh1AG128900 Rh1AG162500 Rh1AG163000 Rh1AG164000 Rh1AG164700 Rh1AG173200 Rh1AG173300 Rh1AG173800 Rh1BG098100 Rh1BG129800 Rh1BG130600 Rh1BG141300 Rh1BG141500 Rh1BG141600 Rh1CG122700 Rh1CG151900 Rh1CG152400 Rh1CG153100 Rh1CG153500 Rh1CG161400 Rh1CG161600 Rh1DG134200 Rh1DG173500 Rh1DG173700 Rh2AG558100 Rh2AG558500 Rh2AG560200 Rh2AG564700 Rh2AG564800 Rh2BG465600 Rh2BG571700 Rh2BG572000 Rh2BG573500 Rh2CG439800 Rh2CG541800 Rh2CG542100 Rh2CG542200 Rh2CG543800 Rh2CG547300 Rh2DG474700 Rh2DG580600 Rh2DG580900 Rh2DG581200 Rh2DG581700 Rh2DG581800 Rh2DG583500 Rh2DG587200 Rh2DG587300 Rh2DG587400 Rh4AG128900 Rh4AG203800 Rh4AG319900 Rh4AG320000 Rh4BG122200 Rh4BG201100 Rh4CG136000 Rh4DG122400 Rh4DG201100 Rh4DG323600 Rh6BG077000 Rh6DG206200 Rh7AG282300 Rh7AG282500 Rh7AG283400 Rh7AG358600 Rh7AG414500 Rh7AG415200 Rh7AG415500 Rh7AG461700 Rh7AG469300 Rh7AG477800 Rh7BG273900 Rh7BG274000 Rh7BG390400 Rh7BG390500 Rh7BG391500 Rh7BG391800 Rh7BG408300 Rh7BG432000 Rh7BG439200 Rh7BG449200 Rh7BG449900 Rh7BG450400 Rh7BG450500 Rh7CG220900 Rh7CG301600 Rh7CG302700 Rh7CG377000 Rh7CG433900 Rh7CG434200 Rh7CG478800 Rh7DG286200 Rh7DG354000 Rh7DG424600 Rh7DG448000 Rh7DG462800 Rh7DG462900
rosa_wichuraiana Rw0G003440 Rw0G011970 Rw0G017120 Rw0G017130 Rw0G017140 Rw0G018470 Rw0G018480 Rw0G020440 Rw1G010470 Rw2G046180 Rw2G046210 Rw2G046230 Rw2G046390 Rw2G046400 Rw2G046710 Rw2G046720 Rw2G046730 Rw3G025310 Rw4G010410 Rw4G017250 Rw6G018270 Rw7G018180 Rw7G024130 Rw7G024160 Rw7G024170 Rw7G034060 Rw7G034250 Rw7G034260 Rw7G034400 Rw7G034410 Rw7G038210 Rw7G039020 Rw7G039060 Rw7G039280 Rw7G039400 Rw7G039470 Rw7G039880 Rw7G039890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 680
AatII GACGTC 1 cut(s) 1758
Acc36I ACCTGC 1 cut(s) 297
AccB1I GGYRCC 1 cut(s) 967
AciI CCGC 5 cut(s) 118, 484, 1907, 1929, 1995
AclWI GGATC 4 cut(s) 206, 1030, 1160, 1706
AcoI YGGCCR 1 cut(s) 690
AcsI RAATTY 1 cut(s) 299
AcuI CTGAAG 3 cut(s) 1480, 1575, 1845
AcyI GRCGYC 1 cut(s) 1755
AfiI CCNNNNNNNGG 6 cut(s) 110, 124, 1287, 1448, 2071, 2174
AgsI TTSAA 3 cut(s) 354, 719, 2055
AhlI ACTAGT 1 cut(s) 742
AjiI CACGTC 1 cut(s) 2111
AjnI CCWGG 7 cut(s) 214, 227, 1141, 1286, 1628, 1852, 2146
AjuI GAANNNNNNNTTGG 2 cut(s) 711, 743
AloI GAACNNNNNNTCC 2 cut(s) 2035, 2067
Alw21I GWGCWC 1 cut(s) 2014
Alw26I GTCTC 4 cut(s) 346, 1746, 1807, 1971
Alw44I GTGCAC 1 cut(s) 2010
AlwI GGATC 4 cut(s) 206, 1030, 1160, 1706
AlwNI CAGNNNCTG 2 cut(s) 215, 1811
AoxI GGCC 6 cut(s) 115, 690, 1214, 1263, 1895, 2062
ApaLI GTGCAC 1 cut(s) 2010
ApeKI GCWGC 8 cut(s) 503, 750, 1175, 1274, 1277, 1583, 1931, 2075
ApoI RAATTY 1 cut(s) 299
AseI ATTAAT 1 cut(s) 908
Asp700I GAANNNNTTC 1 cut(s) 132
AspA2I CCTAGG 1 cut(s) 2090
AspLEI GCGC 3 cut(s) 750, 820, 1441
AspS9I GGNCC 6 cut(s) 1150, 1562, 1730, 1780, 1997, 2178
AsuC2I CCSGG 1 cut(s) 972
AsuHPI GGTGA 5 cut(s) 16, 533, 542, 617, 1005
AvaII GGWCC 6 cut(s) 1150, 1562, 1730, 1780, 1997, 2178
AvrII CCTAGG 1 cut(s) 2090
BaeGI GKGCMC 2 cut(s) 660, 2014
BalI TGGCCA 1 cut(s) 692
BanI GGYRCC 1 cut(s) 967
BauI CACGAG 1 cut(s) 813
Bbv12I GWGCWC 1 cut(s) 2014
BbvI GCAGC 8 cut(s) 515, 737, 1187, 1286, 1289, 1595, 1943, 2087
BccI CCATC 5 cut(s) 12, 340, 682, 701, 1162
BciT130I CCWGG 7 cut(s) 216, 229, 1143, 1288, 1630, 1854, 2148
BclI TGATCA 2 cut(s) 622, 1327
BcnI CCSGG 1 cut(s) 972
BcoDI GTCTC 4 cut(s) 346, 1746, 1807, 1971
BcuI ACTAGT 1 cut(s) 742
BfaI CTAG 6 cut(s) 372, 398, 743, 1250, 2091, 2100
BfmI CTRYAG 4 cut(s) 207, 589, 849, 1185
BfuAI ACCTGC 1 cut(s) 297
BglII AGATCT 1 cut(s) 394
BlnI CCTAGG 1 cut(s) 2090
BlpI GCTNAGC 1 cut(s) 507
BmcAI AGTACT 1 cut(s) 1708
Bme1390I CCNGG 8 cut(s) 216, 229, 972, 1143, 1288, 1630, 1854, 2148
Bme18I GGWCC 6 cut(s) 1150, 1562, 1730, 1780, 1997, 2178
BmgBI CACGTC 1 cut(s) 2111
BmgT120I GGNCC 6 cut(s) 1150, 1562, 1730, 1780, 1997, 2178
BmiI GGNNCC 6 cut(s) 322, 969, 1140, 1152, 1781, 2179
BmrFI CCNGG 8 cut(s) 216, 229, 972, 1143, 1288, 1630, 1854, 2148
BmrI ACTGGG 1 cut(s) 1395
BmsI GCATC 4 cut(s) 129, 520, 1162, 1710
BmuI ACTGGG 1 cut(s) 1395
BplI GAGNNNNNCTC 2 cut(s) 1325, 1357
BpmI CTGGAG 4 cut(s) 328, 339, 744, 1926
Bpu1102I GCTNAGC 1 cut(s) 507
BpuEI CTTGAG 2 cut(s) 1060, 1327
BpuMI CCSGG 1 cut(s) 972
BsaBI GATNNNNATC 2 cut(s) 692, 908
BsaHI GRCGYC 1 cut(s) 1755
BsaJI CCNNGG 7 cut(s) 109, 1287, 1299, 1671, 2090, 2146, 2147
BsaWI WCCGGW 2 cut(s) 154, 2180
BsaXI ACNNNNNCTCC 4 cut(s) 966, 996, 2035, 2065
Bsc4I CCNNNNNNNGG 6 cut(s) 110, 124, 1287, 1448, 2071, 2174
Bse118I RCCGGY 1 cut(s) 1034
Bse1I ACTGG 7 cut(s) 322, 1024, 1390, 1477, 1898, 1943, 2015
Bse3DI GCAATG 2 cut(s) 954, 963
Bse8I GATNNNNATC 2 cut(s) 692, 908
BseBI CCWGG 7 cut(s) 216, 229, 1143, 1288, 1630, 1854, 2148
BseDI CCNNGG 7 cut(s) 109, 1287, 1299, 1671, 2090, 2146, 2147
BseGI GGATG 5 cut(s) 23, 991, 1123, 1295, 1844
BseJI GATNNNNATC 2 cut(s) 692, 908
BseLI CCNNNNNNNGG 6 cut(s) 110, 124, 1287, 1448, 2071, 2174
BseMI GCAATG 2 cut(s) 954, 963
BseMII CTCAG 7 cut(s) 399, 498, 555, 892, 1406, 1762, 1818
BseNI ACTGG 7 cut(s) 322, 1024, 1390, 1477, 1898, 1943, 2015
BseRI GAGGAG 3 cut(s) 456, 990, 1378
BseSI GKGCMC 2 cut(s) 660, 2014
BseXI GCAGC 8 cut(s) 515, 737, 1187, 1286, 1289, 1595, 1943, 2087
BseYI CCCAGC 1 cut(s) 1598
BsgI GTGCAG 1 cut(s) 1602
BshFI GGCC 6 cut(s) 117, 692, 1216, 1265, 1897, 2064
BshNI GGYRCC 1 cut(s) 967
BsiHKAI GWGCWC 1 cut(s) 2014
BsiSI CCGG 5 cut(s) 155, 972, 1035, 1791, 2181
BslFI GGGAC 6 cut(s) 1136, 1402, 1580, 1584, 1793, 2129
BslI CCNNNNNNNGG 6 cut(s) 110, 124, 1287, 1448, 2071, 2174
BsmAI GTCTC 4 cut(s) 346, 1746, 1807, 1971
BsmBI CGTCTC 1 cut(s) 1746
BsmFI GGGAC 6 cut(s) 1136, 1402, 1580, 1584, 1793, 2129
BsmI GAATGC 1 cut(s) 83
BsnI GGCC 6 cut(s) 117, 692, 1216, 1265, 1897, 2064
Bsp1286I GDGCHC 2 cut(s) 660, 2014
Bsp1407I TGTACA 3 cut(s) 469, 548, 1968
Bsp143I GATC 8 cut(s) 211, 394, 622, 1022, 1165, 1327, 1411, 1711
Bsp1720I GCTNAGC 1 cut(s) 507
BspACI CCGC 5 cut(s) 118, 484, 1907, 1929, 1995
BspANI GGCC 6 cut(s) 117, 692, 1216, 1265, 1897, 2064
BspCNI CTCAG 7 cut(s) 398, 499, 556, 891, 1407, 1761, 1817
BspHI TCATGA 2 cut(s) 1330, 1516
BspLI GGNNCC 6 cut(s) 322, 969, 1140, 1152, 1781, 2179
BspMAI CTGCAG 2 cut(s) 211, 853
BspMI ACCTGC 1 cut(s) 297
BspPI GGATC 4 cut(s) 206, 1030, 1160, 1706
BspT107I GGYRCC 1 cut(s) 967
BsrDI GCAATG 2 cut(s) 954, 963
BsrFI RCCGGY 1 cut(s) 1034
BsrGI TGTACA 3 cut(s) 469, 548, 1968
BsrI ACTGG 7 cut(s) 322, 1024, 1390, 1477, 1898, 1943, 2015
BssAI RCCGGY 1 cut(s) 1034
BssECI CCNNGG 7 cut(s) 109, 1287, 1299, 1671, 2090, 2146, 2147
BssMI GATC 8 cut(s) 211, 394, 622, 1022, 1165, 1327, 1411, 1711
BssNI GRCGYC 1 cut(s) 1755
BssSI CACGAG 1 cut(s) 813
BssT1I CCWWGG 3 cut(s) 109, 1671, 2090
Bst2BI CACGAG 1 cut(s) 813
Bst2UI CCWGG 7 cut(s) 216, 229, 1143, 1288, 1630, 1854, 2148
Bst4CI ACNGT 7 cut(s) 61, 311, 590, 617, 632, 832, 888
Bst6I CTCTTC 3 cut(s) 331, 528, 1749
BstACI GRCGYC 1 cut(s) 1755
BstAPI GCANNNNNTGC 1 cut(s) 89
BstAUI TGTACA 3 cut(s) 469, 548, 1968
BstC8I GCNNGC 3 cut(s) 30, 711, 1242
BstEII GGTNACC 1 cut(s) 244
BstF5I GGATG 5 cut(s) 23, 991, 1123, 1295, 1844
BstHHI GCGC 3 cut(s) 750, 820, 1441
BstKTI GATC 8 cut(s) 214, 397, 625, 1025, 1168, 1330, 1414, 1714
BstMAI GTCTC 4 cut(s) 346, 1746, 1807, 1971
BstMBI GATC 8 cut(s) 211, 394, 622, 1022, 1165, 1327, 1411, 1711
BstNI CCWGG 7 cut(s) 216, 229, 1143, 1288, 1630, 1854, 2148
BstNSI RCATGY 1 cut(s) 870
BstPI GGTNACC 1 cut(s) 244
BstSCI CCNGG 8 cut(s) 214, 227, 970, 1141, 1286, 1628, 1852, 2146
BstSFI CTRYAG 4 cut(s) 207, 589, 849, 1185
BstSLI GKGCMC 2 cut(s) 660, 2014
BstV1I GCAGC 8 cut(s) 515, 737, 1187, 1286, 1289, 1595, 1943, 2087
BstX2I RGATCY 2 cut(s) 211, 394
BstYI RGATCY 2 cut(s) 211, 394
BsuRI GGCC 6 cut(s) 117, 692, 1216, 1265, 1897, 2064
BtrI CACGTC 1 cut(s) 2111
BtsCI GGATG 5 cut(s) 23, 991, 1123, 1295, 1844
BtsIMutI CAGTG 7 cut(s) 586, 628, 886, 1377, 1585, 1950, 2078
BveI ACCTGC 1 cut(s) 297
Cac8I GCNNGC 3 cut(s) 30, 711, 1242
CaiI CAGNNNCTG 2 cut(s) 215, 1811
CciI TCATGA 2 cut(s) 1330, 1516
CfoI GCGC 3 cut(s) 750, 820, 1441
Cfr10I RCCGGY 1 cut(s) 1034
Cfr13I GGNCC 6 cut(s) 1150, 1562, 1730, 1780, 1997, 2178
CseI GACGC 1 cut(s) 2109
CspCI CAANNNNNGTGG 2 cut(s) 816, 851
DpnI GATC 8 cut(s) 213, 396, 624, 1024, 1167, 1329, 1413, 1713
DpnII GATC 8 cut(s) 211, 394, 622, 1022, 1165, 1327, 1411, 1711
EaeI YGGCCR 1 cut(s) 690
Eam1104I CTCTTC 3 cut(s) 331, 528, 1749
EarI CTCTTC 3 cut(s) 331, 528, 1749
EciI GGCGGA 1 cut(s) 1896
Eco130I CCWWGG 3 cut(s) 109, 1671, 2090
Eco147I AGGCCT 1 cut(s) 1216
Eco47I GGWCC 6 cut(s) 1150, 1562, 1730, 1780, 1997, 2178
Eco57I CTGAAG 3 cut(s) 1480, 1575, 1845
Eco91I GGTNACC 1 cut(s) 244
EcoO65I GGTNACC 1 cut(s) 244
EcoRII CCWGG 7 cut(s) 214, 227, 1141, 1286, 1628, 1852, 2146
EcoT14I CCWWGG 3 cut(s) 109, 1671, 2090
ErhI CCWWGG 3 cut(s) 109, 1671, 2090
Esp3I CGTCTC 1 cut(s) 1746
FalI AAGNNNNNCTT 2 cut(s) 1417, 1449
FaqI GGGAC 6 cut(s) 1136, 1402, 1580, 1584, 1793, 2129
FbaI TGATCA 2 cut(s) 622, 1327
FokI GGATG 5 cut(s) 30, 998, 1130, 1282, 1831
FspBI CTAG 6 cut(s) 372, 398, 743, 1250, 2091, 2100
GlaI GCGC 3 cut(s) 749, 819, 1440
GsaI CCCAGC 1 cut(s) 1602
GsuI CTGGAG 4 cut(s) 328, 339, 744, 1926
HaeIII GGCC 6 cut(s) 117, 692, 1216, 1265, 1897, 2064
HapII CCGG 5 cut(s) 155, 972, 1035, 1791, 2181
HgaI GACGC 1 cut(s) 2109
HhaI GCGC 3 cut(s) 750, 820, 1441
Hin1I GRCGYC 1 cut(s) 1755
Hin6I GCGC 3 cut(s) 748, 818, 1439
HinP1I GCGC 3 cut(s) 748, 818, 1439
HincII GTYRAC 2 cut(s) 613, 760
HindII GTYRAC 2 cut(s) 613, 760
HindIII AAGCTT 1 cut(s) 1238
HinfI GANTC 6 cut(s) 450, 1253, 1979, 2096, 2103, 2114
HpaI GTTAAC 1 cut(s) 760
HpaII CCGG 5 cut(s) 155, 972, 1035, 1791, 2181
HphI GGTGA 5 cut(s) 16, 533, 542, 617, 1005
Hpy166II GTNNAC 9 cut(s) 613, 760, 872, 884, 1086, 1733, 1971, 2000, 2012
Hpy188I TCNGA 8 cut(s) 138, 565, 1416, 1656, 1751, 1760, 1825, 2108
Hpy8I GTNNAC 9 cut(s) 613, 760, 872, 884, 1086, 1733, 1971, 2000, 2012
HpyAV CCTTC 8 cut(s) 491, 518, 910, 1635, 1693, 1755, 1887, 2054
HpyCH4III ACNGT 7 cut(s) 61, 311, 590, 617, 632, 832, 888
HpyCH4IV ACGT 4 cut(s) 1573, 1615, 1755, 2110
HpySE526I ACGT 4 cut(s) 1573, 1615, 1755, 2110
Hsp92I GRCGYC 1 cut(s) 1755
HspAI GCGC 3 cut(s) 748, 818, 1439
Ksp22I TGATCA 2 cut(s) 622, 1327
KspAI GTTAAC 1 cut(s) 760
Kzo9I GATC 8 cut(s) 211, 394, 622, 1022, 1165, 1327, 1411, 1711
LmnI GCTCC 5 cut(s) 106, 320, 362, 1138, 1210
Lsp1109I GCAGC 8 cut(s) 515, 737, 1187, 1286, 1289, 1595, 1943, 2087
LweI GCATC 4 cut(s) 129, 520, 1162, 1710
MaeI CTAG 6 cut(s) 372, 398, 743, 1250, 2091, 2100
MaeII ACGT 4 cut(s) 1573, 1615, 1755, 2110
MaeIII GTNAC 5 cut(s) 146, 244, 670, 1525, 1662
MalI GATC 8 cut(s) 213, 396, 624, 1024, 1167, 1329, 1413, 1713
MboI GATC 8 cut(s) 211, 394, 622, 1022, 1165, 1327, 1411, 1711
MboII GAAGA 7 cut(s) 318, 545, 886, 1417, 1736, 1806, 1917
MfeI CAATTG 2 cut(s) 23, 646
MflI RGATCY 2 cut(s) 211, 394
MhlI GDGCHC 2 cut(s) 660, 2014
MlsI TGGCCA 1 cut(s) 692
MluNI TGGCCA 1 cut(s) 692
MlyI GAGTC 3 cut(s) 1247, 1973, 2105
MmeI TCCRAC 2 cut(s) 418, 427
Mox20I TGGCCA 1 cut(s) 692
MroXI GAANNNNTTC 1 cut(s) 132
MscI TGGCCA 1 cut(s) 692
MseI TTAA 5 cut(s) 258, 642, 759, 908, 2006
MslI CAYNNNNRTG 2 cut(s) 516, 1515
Msp20I TGGCCA 1 cut(s) 692
MspA1I CMGCKG 3 cut(s) 416, 506, 1178
MspI CCGG 5 cut(s) 155, 972, 1035, 1791, 2181
MspR9I CCNGG 8 cut(s) 216, 229, 972, 1143, 1288, 1630, 1854, 2148
MunI CAATTG 2 cut(s) 23, 646
Mva1269I GAATGC 1 cut(s) 83
MvaI CCWGG 7 cut(s) 216, 229, 1143, 1288, 1630, 1854, 2148
NciI CCSGG 1 cut(s) 972
NdeII GATC 8 cut(s) 211, 394, 622, 1022, 1165, 1327, 1411, 1711
NlaIV GGNNCC 6 cut(s) 322, 969, 1140, 1152, 1781, 2179
NmeAIII GCCGAG 1 cut(s) 1481
NmuCI GTSAC 3 cut(s) 670, 1525, 1662
NspI RCATGY 1 cut(s) 870
PagI TCATGA 2 cut(s) 1330, 1516
PasI CCCWGGG 1 cut(s) 2147
PceI AGGCCT 1 cut(s) 1216
PcsI WCGNNNNNNNCGW 1 cut(s) 57
PctI GAATGC 1 cut(s) 83
PdmI GAANNNNTTC 1 cut(s) 132
PfeI GAWTC 3 cut(s) 450, 2103, 2114
PflFI GACNNNGTC 1 cut(s) 1660
PfoI TCCNGGA 3 cut(s) 214, 1628, 1852
PleI GAGTC 3 cut(s) 1247, 1973, 2104
PpsI GAGTC 3 cut(s) 1247, 1973, 2104
PshBI ATTAAT 1 cut(s) 908
PsiI TTATAA 1 cut(s) 680
Psp6I CCWGG 7 cut(s) 214, 227, 1141, 1286, 1628, 1852, 2146
PspEI GGTNACC 1 cut(s) 244
PspFI CCCAGC 1 cut(s) 1598
PspGI CCWGG 7 cut(s) 214, 227, 1141, 1286, 1628, 1852, 2146
PspN4I GGNNCC 6 cut(s) 322, 969, 1140, 1152, 1781, 2179
PspPI GGNCC 6 cut(s) 1150, 1562, 1730, 1780, 1997, 2178
PsrI GAACNNNNNNTAC 2 cut(s) 1605, 1637
PstI CTGCAG 2 cut(s) 211, 853
PstNI CAGNNNCTG 2 cut(s) 215, 1811
PsuI RGATCY 2 cut(s) 211, 394
PsyI GACNNNGTC 1 cut(s) 1660
PvuII CAGCTG 3 cut(s) 416, 506, 1178
RseI CAYNNNNRTG 2 cut(s) 516, 1515
SaqAI TTAA 5 cut(s) 258, 642, 759, 908, 2006
Sau3AI GATC 8 cut(s) 211, 394, 622, 1022, 1165, 1327, 1411, 1711
Sau96I GGNCC 6 cut(s) 1150, 1562, 1730, 1780, 1997, 2178
ScaI AGTACT 1 cut(s) 1708
SchI GAGTC 3 cut(s) 1247, 1973, 2105
ScrFI CCNGG 8 cut(s) 216, 229, 972, 1143, 1288, 1630, 1854, 2148
SduI GDGCHC 2 cut(s) 660, 2014
SfaNI GCATC 4 cut(s) 129, 520, 1162, 1710
SfcI CTRYAG 4 cut(s) 207, 589, 849, 1185
SinI GGWCC 6 cut(s) 1150, 1562, 1730, 1780, 1997, 2178
SmiMI CAYNNNNRTG 2 cut(s) 516, 1515
SmlI CTYRAG 2 cut(s) 1039, 1342
SmoI CTYRAG 2 cut(s) 1039, 1342
SpeI ACTAGT 1 cut(s) 742
SseBI AGGCCT 1 cut(s) 1216
SsiI CCGC 5 cut(s) 118, 484, 1907, 1929, 1995
SspI AATATT 1 cut(s) 409
SspMI CTAG 6 cut(s) 372, 398, 743, 1250, 2091, 2100
StuI AGGCCT 1 cut(s) 1216
StyD4I CCNGG 8 cut(s) 214, 227, 970, 1141, 1286, 1628, 1852, 2146
StyI CCWWGG 3 cut(s) 109, 1671, 2090
TaaI ACNGT 7 cut(s) 61, 311, 590, 617, 632, 832, 888
TaiI ACGT 4 cut(s) 1576, 1618, 1758, 2113
TaqI TCGA 1 cut(s) 1831
TatI WGTACW 8 cut(s) 191, 469, 548, 739, 845, 1008, 1706, 1968
TauI GCSGC 2 cut(s) 120, 486
TfiI GAWTC 3 cut(s) 450, 2103, 2114
Tru1I TTAA 5 cut(s) 258, 642, 759, 908, 2006
Tru9I TTAA 5 cut(s) 258, 642, 759, 908, 2006
TscAI CASTG 7 cut(s) 593, 635, 886, 1384, 1585, 1950, 2085
TseFI GTSAC 3 cut(s) 670, 1525, 1662
TseI GCWGC 8 cut(s) 503, 750, 1175, 1274, 1277, 1583, 1931, 2075
Tsp45I GTSAC 3 cut(s) 670, 1525, 1662
TspDTI ATGAA 9 cut(s) 1134, 1284, 1418, 1482, 1505, 1533, 1698, 1911, 2052
TspGWI ACGGA 1 cut(s) 1837
TspRI CASTG 7 cut(s) 593, 635, 886, 1384, 1585, 1950, 2085
Tth111I GACNNNGTC 1 cut(s) 1660
VneI GTGCAC 1 cut(s) 2010
VpaK11BI GGWCC 6 cut(s) 1150, 1562, 1730, 1780, 1997, 2178
VspI ATTAAT 1 cut(s) 908
XapI RAATTY 1 cut(s) 299
XbaI TCTAGA 1 cut(s) 2099
XceI RCATGY 1 cut(s) 870
XmaJI CCTAGG 1 cut(s) 2090
XmnI GAANNNNTTC 1 cut(s) 132
XspI CTAG 6 cut(s) 372, 398, 743, 1250, 2091, 2100
ZraI GACGTC 1 cut(s) 1756
ZrmI AGTACT 1 cut(s) 1708
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.