protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 257, 281 |
| AatII | GACGTC | 2 cut(s) | 261, 2964 |
| Acc65I | GGTACC | 1 cut(s) | 788 |
| AccB1I | GGYRCC | 3 cut(s) | 788, 994, 2626 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2636 |
| AccBSI | CCGCTC | 2 cut(s) | 103, 1656 |
| AccI | GTMKAC | 4 cut(s) | 261, 952, 1942, 2538 |
| AccII | CGCG | 1 cut(s) | 212 |
| AclI | AACGTT | 1 cut(s) | 929 |
| AclWI | GGATC | 4 cut(s) | 47, 58, 2320, 3388 |
| AcoI | YGGCCR | 1 cut(s) | 169 |
| AcsI | RAATTY | 8 cut(s) | 1512, 1717, 1772, 2281, 2307, 2930, 2952, 3338 |
| AcuI | CTGAAG | 5 cut(s) | 136, 603, 1220, 1347, 2247 |
| AcyI | GRCGYC | 2 cut(s) | 258, 2961 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 739, 1128, 1129, 1418, 2125, 2441, 2528, 2636, 3020 |
| AflIII | ACRYGT | 2 cut(s) | 1261, 2455 |
| AhlI | ACTAGT | 2 cut(s) | 1097, 1273 |
| AjnI | CCWGG | 6 cut(s) | 57, 448, 920, 1411, 1904, 2429 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 706, 738, 1748, 1780 |
| AleI | CACNNNNGTG | 1 cut(s) | 2532 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1498, 1530, 3054, 3086 |
| Alw21I | GWGCWC | 3 cut(s) | 1208, 1714, 2529 |
| Alw26I | GTCTC | 3 cut(s) | 298, 1664, 2192 |
| Alw44I | GTGCAC | 1 cut(s) | 2525 |
| AlwI | GGATC | 4 cut(s) | 47, 58, 2320, 3388 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 544, 1247, 2063, 2878 |
| Ama87I | CYCGRG | 1 cut(s) | 1068 |
| AoxI | GGCC | 7 cut(s) | 13, 169, 1562, 1902, 2432, 2735, 3000 |
| ApaLI | GTGCAC | 1 cut(s) | 2525 |
| ApoI | RAATTY | 8 cut(s) | 1512, 1717, 1772, 2281, 2307, 2930, 2952, 3338 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1957, 1989, 3398, 3430 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 458 |
| Asp718I | GGTACC | 1 cut(s) | 788 |
| AspLEI | GCGC | 4 cut(s) | 214, 343, 643, 1410 |
| AspS9I | GGNCC | 9 cut(s) | 883, 1658, 1748, 2048, 2433, 2444, 2869, 3000, 3205 |
| AsuHPI | GGTGA | 7 cut(s) | 109, 602, 770, 1433, 2365, 2655, 3059 |
| AsuII | TTCGAA | 2 cut(s) | 562, 1030 |
| AvaI | CYCGRG | 1 cut(s) | 1068 |
| AvaII | GGWCC | 7 cut(s) | 883, 1658, 1748, 2048, 2444, 2869, 3205 |
| BaeGI | GKGCMC | 1 cut(s) | 2529 |
| BanI | GGYRCC | 3 cut(s) | 788, 994, 2626 |
| BanII | GRGCYC | 1 cut(s) | 3474 |
| BbsI | GAAGAC | 2 cut(s) | 273, 2893 |
| Bbv12I | GWGCWC | 3 cut(s) | 1208, 1714, 2529 |
| BbvCI | CCTCAGC | 2 cut(s) | 2673, 3201 |
| BccI | CCATC | 7 cut(s) | 598, 1131, 2155, 2261, 2446, 2727, 3185 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3398, 3432 |
| BciT130I | CCWGG | 6 cut(s) | 59, 450, 922, 1413, 1906, 2431 |
| BclI | TGATCA | 1 cut(s) | 1579 |
| BcoDI | GTCTC | 3 cut(s) | 298, 1664, 2192 |
| BcuI | ACTAGT | 2 cut(s) | 1097, 1273 |
| BfaI | CTAG | 7 cut(s) | 1022, 1085, 1098, 1274, 1676, 3170, 3556 |
| BfmI | CTRYAG | 3 cut(s) | 1377, 2064, 3528 |
| BmcAI | AGTACT | 1 cut(s) | 2744 |
| Bme1390I | CCNGG | 6 cut(s) | 59, 450, 922, 1413, 1906, 2431 |
| Bme18I | GGWCC | 7 cut(s) | 883, 1658, 1748, 2048, 2444, 2869, 3205 |
| BmeT110I | CYCGRG | 1 cut(s) | 1068 |
| BmgT120I | GGNCC | 9 cut(s) | 883, 1658, 1748, 2048, 2433, 2444, 2869, 3000, 3205 |
| BmiI | GGNNCC | 7 cut(s) | 231, 790, 996, 2435, 2498, 2628, 3158 |
| BmrFI | CCNGG | 6 cut(s) | 59, 450, 922, 1413, 1906, 2431 |
| BmrI | ACTGGG | 1 cut(s) | 2343 |
| BmsI | GCATC | 2 cut(s) | 2119, 3545 |
| BmuI | ACTGGG | 1 cut(s) | 2343 |
| BpiI | GAAGAC | 2 cut(s) | 273, 2893 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2688, 2720 |
| BpmI | CTGGAG | 4 cut(s) | 864, 2040, 2658, 2822 |
| Bpu10I | CCTNAGC | 3 cut(s) | 242, 2673, 3201 |
| Bpu14I | TTCGAA | 2 cut(s) | 562, 1030 |
| BpuEI | CTTGAG | 2 cut(s) | 173, 2216 |
| Bsa29I | ATCGAT | 1 cut(s) | 2731 |
| BsaHI | GRCGYC | 2 cut(s) | 258, 2961 |
| BsaI | GGTCTC | 1 cut(s) | 298 |
| BsaJI | CCNNGG | 9 cut(s) | 449, 737, 990, 1069, 1127, 1411, 1498, 1751, 2630 |
| BsaWI | WCCGGW | 4 cut(s) | 67, 308, 1554, 2181 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 739, 1128, 1129, 1418, 2125, 2441, 2528, 2636, 3020 |
| Bse118I | RCCGGY | 1 cut(s) | 200 |
| Bse1I | ACTGG | 8 cut(s) | 406, 792, 906, 1542, 1661, 2349, 2522, 2805 |
| Bse3DI | GCAATG | 1 cut(s) | 715 |
| BseBI | CCWGG | 6 cut(s) | 59, 450, 922, 1413, 1906, 2431 |
| BseCI | ATCGAT | 1 cut(s) | 2731 |
| BseDI | CCNNGG | 9 cut(s) | 449, 737, 990, 1069, 1127, 1411, 1498, 1751, 2630 |
| BseGI | GGATG | 5 cut(s) | 609, 787, 1123, 1843, 2134 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 739, 1128, 1129, 1418, 2125, 2441, 2528, 2636, 3020 |
| BseMI | GCAATG | 1 cut(s) | 715 |
| BseMII | CTCAG | 7 cut(s) | 233, 465, 1359, 1805, 2664, 2753, 3192 |
| BseNI | ACTGG | 8 cut(s) | 406, 792, 906, 1542, 1661, 2349, 2522, 2805 |
| BseRI | GAGGAG | 2 cut(s) | 383, 1297 |
| BseSI | GKGCMC | 1 cut(s) | 2529 |
| BseYI | CCCAGC | 1 cut(s) | 3234 |
| BsgI | GTGCAG | 1 cut(s) | 970 |
| Bsh1236I | CGCG | 1 cut(s) | 212 |
| Bsh1285I | CGRYCG | 1 cut(s) | 127 |
| BshFI | GGCC | 7 cut(s) | 15, 171, 1564, 1904, 2434, 2737, 3002 |
| BshNI | GGYRCC | 3 cut(s) | 788, 994, 2626 |
| BshVI | ATCGAT | 1 cut(s) | 2731 |
| BsiEI | CGRYCG | 1 cut(s) | 127 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1208, 1714, 2529 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1068 |
| BsiSI | CCGG | 6 cut(s) | 68, 168, 201, 309, 1555, 2182 |
| BslFI | GGGAC | 4 cut(s) | 124, 589, 2897, 3336 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 739, 1128, 1129, 1418, 2125, 2441, 2528, 2636, 3020 |
| BsmAI | GTCTC | 3 cut(s) | 298, 1664, 2192 |
| BsmFI | GGGAC | 4 cut(s) | 124, 589, 2897, 3336 |
| BsmI | GAATGC | 3 cut(s) | 710, 2417, 3222 |
| BsnI | GGCC | 7 cut(s) | 15, 171, 1564, 1904, 2434, 2737, 3002 |
| Bso31I | GGTCTC | 1 cut(s) | 298 |
| BsoBI | CYCGRG | 1 cut(s) | 1068 |
| Bsp119I | TTCGAA | 2 cut(s) | 562, 1030 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1208, 1714, 2529, 3474 |
| Bsp1407I | TGTACA | 2 cut(s) | 1230, 2288 |
| Bsp19I | CCATGG | 2 cut(s) | 1751, 2630 |
| BspANI | GGCC | 7 cut(s) | 15, 171, 1564, 1904, 2434, 2737, 3002 |
| BspCNI | CTCAG | 7 cut(s) | 234, 466, 1360, 1806, 2665, 2752, 3193 |
| BspDI | ATCGAT | 1 cut(s) | 2731 |
| BspFNI | CGCG | 1 cut(s) | 212 |
| BspHI | TCATGA | 1 cut(s) | 2110 |
| BspLI | GGNNCC | 7 cut(s) | 231, 790, 996, 2435, 2498, 2628, 3158 |
| BspMAI | CTGCAG | 2 cut(s) | 2068, 3532 |
| BspPI | GGATC | 4 cut(s) | 47, 58, 2320, 3388 |
| BspQI | GCTCTTC | 3 cut(s) | 1032, 1196, 1467 |
| BspT104I | TTCGAA | 2 cut(s) | 562, 1030 |
| BspT107I | GGYRCC | 3 cut(s) | 788, 994, 2626 |
| BspTNI | GGTCTC | 1 cut(s) | 298 |
| BsrBI | CCGCTC | 2 cut(s) | 103, 1656 |
| BsrDI | GCAATG | 1 cut(s) | 715 |
| BsrFI | RCCGGY | 1 cut(s) | 200 |
| BsrGI | TGTACA | 2 cut(s) | 1230, 2288 |
| BsrI | ACTGG | 8 cut(s) | 406, 792, 906, 1542, 1661, 2349, 2522, 2805 |
| BssAI | RCCGGY | 1 cut(s) | 200 |
| BssECI | CCNNGG | 9 cut(s) | 449, 737, 990, 1069, 1127, 1411, 1498, 1751, 2630 |
| BssNAI | GTATAC | 2 cut(s) | 953, 1943 |
| BssNI | GRCGYC | 2 cut(s) | 258, 2961 |
| BssT1I | CCWWGG | 4 cut(s) | 737, 1498, 1751, 2630 |
| Bst1107I | GTATAC | 2 cut(s) | 953, 1943 |
| Bst2UI | CCWGG | 6 cut(s) | 59, 450, 922, 1413, 1906, 2431 |
| Bst4CI | ACNGT | 8 cut(s) | 128, 1947, 2531, 2972, 3042, 3070, 3112, 3146 |
| Bst6I | CTCTTC | 7 cut(s) | 155, 360, 1032, 1196, 1323, 1467, 2942 |
| BstACI | GRCGYC | 2 cut(s) | 258, 2961 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2423 |
| BstAUI | TGTACA | 2 cut(s) | 1230, 2288 |
| BstBI | TTCGAA | 2 cut(s) | 562, 1030 |
| BstC8I | GCNNGC | 8 cut(s) | 105, 210, 870, 874, 1406, 3105, 3138, 3222 |
| BstDEI | CTNAG | 8 cut(s) | 242, 474, 1368, 1814, 1864, 2673, 2739, 3201 |
| BstDSI | CCRYGG | 2 cut(s) | 1751, 2630 |
| BstF5I | GGATG | 5 cut(s) | 609, 787, 1123, 1843, 2134 |
| BstFNI | CGCG | 1 cut(s) | 212 |
| BstHHI | GCGC | 4 cut(s) | 214, 343, 643, 1410 |
| BstMAI | GTCTC | 3 cut(s) | 298, 1664, 2192 |
| BstMCI | CGRYCG | 1 cut(s) | 127 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 162, 246, 944, 1416, 1709, 2072, 2423, 3533 |
| BstNI | CCWGG | 6 cut(s) | 59, 450, 922, 1413, 1906, 2431 |
| BstNSI | RCATGY | 6 cut(s) | 951, 1265, 2194, 2459, 2765, 3224 |
| BstSCI | CCNGG | 6 cut(s) | 57, 448, 920, 1411, 1904, 2429 |
| BstSFI | CTRYAG | 3 cut(s) | 1377, 2064, 3528 |
| BstSLI | GKGCMC | 1 cut(s) | 2529 |
| BstUI | CGCG | 1 cut(s) | 212 |
| BstV2I | GAAGAC | 2 cut(s) | 273, 2893 |
| BstX2I | RGATCY | 2 cut(s) | 2325, 3380 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 880, 1758 |
| BstYI | RGATCY | 2 cut(s) | 2325, 3380 |
| BstZ17I | GTATAC | 2 cut(s) | 953, 1943 |
| Bsu15I | ATCGAT | 1 cut(s) | 2731 |
| BsuRI | GGCC | 7 cut(s) | 15, 171, 1564, 1904, 2434, 2737, 3002 |
| BsuTUI | ATCGAT | 1 cut(s) | 2731 |
| BtgI | CCRYGG | 2 cut(s) | 1751, 2630 |
| BtsCI | GGATG | 5 cut(s) | 609, 787, 1123, 1843, 2134 |
| BtsIMutI | CAGTG | 7 cut(s) | 913, 1365, 1549, 2529, 2798, 2968, 3224 |
| Cac8I | GCNNGC | 8 cut(s) | 105, 210, 870, 874, 1406, 3105, 3138, 3222 |
| CaiI | CAGNNNCTG | 4 cut(s) | 544, 1247, 2063, 2878 |
| CciI | TCATGA | 1 cut(s) | 2110 |
| CfoI | GCGC | 4 cut(s) | 214, 343, 643, 1410 |
| Cfr10I | RCCGGY | 1 cut(s) | 200 |
| Cfr13I | GGNCC | 9 cut(s) | 883, 1658, 1748, 2048, 2433, 2444, 2869, 3000, 3205 |
| ClaI | ATCGAT | 1 cut(s) | 2731 |
| CseI | GACGC | 3 cut(s) | 271, 1466, 3542 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1122, 1157 |
| DdeI | CTNAG | 8 cut(s) | 242, 474, 1368, 1814, 1864, 2673, 2739, 3201 |
| DraI | TTTAAA | 2 cut(s) | 1299, 2937 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 257, 281 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 257, 281 |
| EaeI | YGGCCR | 1 cut(s) | 169 |
| Eam1104I | CTCTTC | 7 cut(s) | 155, 360, 1032, 1196, 1323, 1467, 2942 |
| EarI | CTCTTC | 7 cut(s) | 155, 360, 1032, 1196, 1323, 1467, 2942 |
| Eco130I | CCWWGG | 4 cut(s) | 737, 1498, 1751, 2630 |
| Eco147I | AGGCCT | 1 cut(s) | 15 |
| Eco24I | GRGCYC | 1 cut(s) | 3474 |
| Eco31I | GGTCTC | 1 cut(s) | 298 |
| Eco32I | GATATC | 5 cut(s) | 1820, 2116, 2515, 2821, 2986 |
| Eco47I | GGWCC | 7 cut(s) | 883, 1658, 1748, 2048, 2444, 2869, 3205 |
| Eco57I | CTGAAG | 5 cut(s) | 136, 603, 1220, 1347, 2247 |
| Eco88I | CYCGRG | 1 cut(s) | 1068 |
| EcoRI | GAATTC | 2 cut(s) | 1512, 2952 |
| EcoRII | CCWGG | 6 cut(s) | 57, 448, 920, 1411, 1904, 2429 |
| EcoRV | GATATC | 5 cut(s) | 1820, 2116, 2515, 2821, 2986 |
| EcoT14I | CCWWGG | 4 cut(s) | 737, 1498, 1751, 2630 |
| EcoT22I | ATGCAT | 2 cut(s) | 1346, 3222 |
| EcoT38I | GRGCYC | 1 cut(s) | 3474 |
| ErhI | CCWWGG | 4 cut(s) | 737, 1498, 1751, 2630 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1320, 1352, 2220, 2252 |
| FaqI | GGGAC | 4 cut(s) | 124, 589, 2897, 3336 |
| FauI | CCCGC | 1 cut(s) | 2092 |
| FbaI | TGATCA | 1 cut(s) | 1579 |
| FblI | GTMKAC | 4 cut(s) | 261, 952, 1942, 2538 |
| FokI | GGATG | 5 cut(s) | 616, 794, 1110, 1850, 2141 |
| FriOI | GRGCYC | 1 cut(s) | 3474 |
| FspBI | CTAG | 7 cut(s) | 1022, 1085, 1098, 1274, 1676, 3170, 3556 |
| GlaI | GCGC | 4 cut(s) | 213, 342, 642, 1409 |
| GsaI | CCCAGC | 1 cut(s) | 3238 |
| GsuI | CTGGAG | 4 cut(s) | 864, 2040, 2658, 2822 |
| HaeIII | GGCC | 7 cut(s) | 15, 171, 1564, 1904, 2434, 2737, 3002 |
| HapII | CCGG | 6 cut(s) | 68, 168, 201, 309, 1555, 2182 |
| HgaI | GACGC | 3 cut(s) | 271, 1466, 3542 |
| HhaI | GCGC | 4 cut(s) | 214, 343, 643, 1410 |
| Hin1I | GRCGYC | 2 cut(s) | 258, 2961 |
| Hin6I | GCGC | 4 cut(s) | 212, 341, 641, 1408 |
| HinP1I | GCGC | 4 cut(s) | 212, 341, 641, 1408 |
| HincII | GTYRAC | 4 cut(s) | 262, 829, 2646, 3244 |
| HindII | GTYRAC | 4 cut(s) | 262, 829, 2646, 3244 |
| HindIII | AAGCTT | 1 cut(s) | 804 |
| HpaII | CCGG | 6 cut(s) | 68, 168, 201, 309, 1555, 2182 |
| HphI | GGTGA | 7 cut(s) | 109, 602, 770, 1433, 2365, 2655, 3059 |
| Hpy99I | CGWCG | 7 cut(s) | 23, 238, 263, 266, 275, 278, 287 |
| HpyCH4III | ACNGT | 8 cut(s) | 128, 1947, 2531, 2972, 3042, 3070, 3112, 3146 |
| HpyCH4IV | ACGT | 5 cut(s) | 258, 929, 1611, 2961, 3552 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 162, 246, 944, 1416, 1709, 2072, 2423, 3533 |
| HpyF3I | CTNAG | 8 cut(s) | 242, 474, 1368, 1814, 1864, 2673, 2739, 3201 |
| HpySE526I | ACGT | 5 cut(s) | 258, 929, 1611, 2961, 3552 |
| Hsp92I | GRCGYC | 2 cut(s) | 258, 2961 |
| HspAI | GCGC | 4 cut(s) | 212, 341, 641, 1408 |
| KpnI | GGTACC | 1 cut(s) | 792 |
| Ksp22I | TGATCA | 1 cut(s) | 1579 |
| LguI | GCTCTTC | 3 cut(s) | 1032, 1196, 1467 |
| LmnI | GCTCC | 4 cut(s) | 161, 170, 235, 3162 |
| LweI | GCATC | 2 cut(s) | 2119, 3545 |
| MaeI | CTAG | 7 cut(s) | 1022, 1085, 1098, 1274, 1676, 3170, 3556 |
| MaeII | ACGT | 5 cut(s) | 258, 929, 1611, 2961, 3552 |
| MaeIII | GTNAC | 4 cut(s) | 1318, 1332, 2219, 2896 |
| MbiI | CCGCTC | 2 cut(s) | 103, 1656 |
| MfeI | CAATTG | 1 cut(s) | 2355 |
| MflI | RGATCY | 2 cut(s) | 2325, 3380 |
| MhlI | GDGCHC | 4 cut(s) | 1208, 1714, 2529, 3474 |
| MlyI | GAGTC | 8 cut(s) | 1340, 1456, 1666, 2069, 2074, 2534, 2821, 3239 |
| MmeI | TCCRAC | 9 cut(s) | 147, 1126, 1282, 1375, 1674, 1746, 1874, 1929, 2075 |
| Mph1103I | ATGCAT | 2 cut(s) | 1346, 3222 |
| MroXI | GAANNNNTTC | 1 cut(s) | 458 |
| MseI | TTAA | 8 cut(s) | 434, 492, 1298, 2595, 2834, 2859, 2936, 2990 |
| MslI | CAYNNNNRTG | 6 cut(s) | 1339, 1575, 1756, 1838, 2460, 2532 |
| MspA1I | CMGCKG | 1 cut(s) | 2378 |
| MspI | CCGG | 6 cut(s) | 68, 168, 201, 309, 1555, 2182 |
| MspR9I | CCNGG | 6 cut(s) | 59, 450, 922, 1413, 1906, 2431 |
| MunI | CAATTG | 1 cut(s) | 2355 |
| Mva1269I | GAATGC | 3 cut(s) | 710, 2417, 3222 |
| MvaI | CCWGG | 6 cut(s) | 59, 450, 922, 1413, 1906, 2431 |
| MvnI | CGCG | 1 cut(s) | 212 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 162, 246, 944, 1416, 1709, 2072, 2423, 3533 |
| NcoI | CCATGG | 2 cut(s) | 1751, 2630 |
| NlaIV | GGNNCC | 7 cut(s) | 231, 790, 996, 2435, 2498, 2628, 3158 |
| NmeAIII | GCCGAG | 1 cut(s) | 133 |
| NmuCI | GTSAC | 1 cut(s) | 1332 |
| NsiI | ATGCAT | 2 cut(s) | 1346, 3222 |
| NspI | RCATGY | 6 cut(s) | 951, 1265, 2194, 2459, 2765, 3224 |
| NspV | TTCGAA | 2 cut(s) | 562, 1030 |
| OliI | CACNNNNGTG | 1 cut(s) | 2532 |
| PaeI | GCATGC | 1 cut(s) | 3224 |
| PagI | TCATGA | 1 cut(s) | 2110 |
| PceI | AGGCCT | 1 cut(s) | 15 |
| PciI | ACATGT | 2 cut(s) | 1261, 2455 |
| PciSI | GCTCTTC | 3 cut(s) | 1032, 1196, 1467 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 267, 270, 279, 282 |
| PctI | GAATGC | 3 cut(s) | 710, 2417, 3222 |
| PdmI | GAANNNNTTC | 1 cut(s) | 458 |
| PflFI | GACNNNGTC | 1 cut(s) | 824 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2636 |
| PleI | GAGTC | 8 cut(s) | 1339, 1455, 1666, 2068, 2074, 2534, 2821, 3239 |
| PpsI | GAGTC | 8 cut(s) | 1339, 1455, 1666, 2068, 2074, 2534, 2821, 3239 |
| PscI | ACATGT | 2 cut(s) | 1261, 2455 |
| Psp1406I | AACGTT | 1 cut(s) | 929 |
| Psp6I | CCWGG | 6 cut(s) | 57, 448, 920, 1411, 1904, 2429 |
| PspFI | CCCAGC | 1 cut(s) | 3234 |
| PspGI | CCWGG | 6 cut(s) | 57, 448, 920, 1411, 1904, 2429 |
| PspN4I | GGNNCC | 7 cut(s) | 231, 790, 996, 2435, 2498, 2628, 3158 |
| PspPI | GGNCC | 9 cut(s) | 883, 1658, 1748, 2048, 2433, 2444, 2869, 3000, 3205 |
| PstI | CTGCAG | 2 cut(s) | 2068, 3532 |
| PstNI | CAGNNNCTG | 4 cut(s) | 544, 1247, 2063, 2878 |
| PsuI | RGATCY | 2 cut(s) | 2325, 3380 |
| PsyI | GACNNNGTC | 1 cut(s) | 824 |
| RseI | CAYNNNNRTG | 6 cut(s) | 1339, 1575, 1756, 1838, 2460, 2532 |
| SalI | GTCGAC | 1 cut(s) | 260 |
| SapI | GCTCTTC | 3 cut(s) | 1032, 1196, 1467 |
| SaqAI | TTAA | 8 cut(s) | 434, 492, 1298, 2595, 2834, 2859, 2936, 2990 |
| Sau96I | GGNCC | 9 cut(s) | 883, 1658, 1748, 2048, 2433, 2444, 2869, 3000, 3205 |
| ScaI | AGTACT | 1 cut(s) | 2744 |
| SchI | GAGTC | 8 cut(s) | 1340, 1456, 1666, 2069, 2074, 2534, 2821, 3239 |
| ScrFI | CCNGG | 6 cut(s) | 59, 450, 922, 1413, 1906, 2431 |
| SduI | GDGCHC | 4 cut(s) | 1208, 1714, 2529, 3474 |
| SfaNI | GCATC | 2 cut(s) | 2119, 3545 |
| SfcI | CTRYAG | 3 cut(s) | 1377, 2064, 3528 |
| SfuI | TTCGAA | 2 cut(s) | 562, 1030 |
| SgrDI | CGTCGACG | 1 cut(s) | 260 |
| SinI | GGWCC | 7 cut(s) | 883, 1658, 1748, 2048, 2444, 2869, 3205 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 1339, 1575, 1756, 1838, 2460, 2532 |
| SmlI | CTYRAG | 2 cut(s) | 188, 2195 |
| SmoI | CTYRAG | 2 cut(s) | 188, 2195 |
| SpeI | ACTAGT | 2 cut(s) | 1097, 1273 |
| SphI | GCATGC | 1 cut(s) | 3224 |
| SseBI | AGGCCT | 1 cut(s) | 15 |
| SspI | AATATT | 1 cut(s) | 3285 |
| SspMI | CTAG | 7 cut(s) | 1022, 1085, 1098, 1274, 1676, 3170, 3556 |
| StuI | AGGCCT | 1 cut(s) | 15 |
| StyD4I | CCNGG | 6 cut(s) | 57, 448, 920, 1411, 1904, 2429 |
| StyI | CCWWGG | 4 cut(s) | 737, 1498, 1751, 2630 |
| TaaI | ACNGT | 8 cut(s) | 128, 1947, 2531, 2972, 3042, 3070, 3112, 3146 |
| TaiI | ACGT | 5 cut(s) | 261, 932, 1614, 2964, 3555 |
| TaqII | GACCGA | 1 cut(s) | 280 |
| TatI | WGTACW | 6 cut(s) | 1230, 1619, 2089, 2288, 2341, 2742 |
| TauI | GCSGC | 3 cut(s) | 85, 88, 103 |
| Tru1I | TTAA | 8 cut(s) | 434, 492, 1298, 2595, 2834, 2859, 2936, 2990 |
| Tru9I | TTAA | 8 cut(s) | 434, 492, 1298, 2595, 2834, 2859, 2936, 2990 |
| TscAI | CASTG | 7 cut(s) | 913, 1372, 1549, 2529, 2805, 2975, 3231 |
| TseFI | GTSAC | 1 cut(s) | 1332 |
| Tsp45I | GTSAC | 1 cut(s) | 1332 |
| TspGWI | ACGGA | 5 cut(s) | 222, 362, 998, 1761, 3197 |
| TspRI | CASTG | 7 cut(s) | 913, 1372, 1549, 2529, 2805, 2975, 3231 |
| Tth111I | GACNNNGTC | 1 cut(s) | 824 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2636 |
| VneI | GTGCAC | 1 cut(s) | 2525 |
| VpaK11BI | GGWCC | 7 cut(s) | 883, 1658, 1748, 2048, 2444, 2869, 3205 |
| XapI | RAATTY | 8 cut(s) | 1512, 1717, 1772, 2281, 2307, 2930, 2952, 3338 |
| XbaI | TCTAGA | 1 cut(s) | 3169 |
| XceI | RCATGY | 6 cut(s) | 951, 1265, 2194, 2459, 2765, 3224 |
| XmiI | GTMKAC | 4 cut(s) | 261, 952, 1942, 2538 |
| XmnI | GAANNNNTTC | 1 cut(s) | 458 |
| XspI | CTAG | 7 cut(s) | 1022, 1085, 1098, 1274, 1676, 3170, 3556 |
| ZraI | GACGTC | 2 cut(s) | 259, 2962 |
| ZrmI | AGTACT | 1 cut(s) | 2744 |
| Zsp2I | ATGCAT | 2 cut(s) | 1346, 3222 |