RchiOBHm_Chr1g0332901

Domain of unknown function

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
24667758 .. 24672407
4650 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56177

Sequence Viewer

Length: 1626 bp
ATGAGTAAGGACGACTTGAAGATCAAAGGAAAAGATGGCAAGACTGCTCTTGTTGTTGCTATAAATACAGGAAAAAAAGAAATGGTTAAATGCATGGTTAGAAAGGACGAATATATTGTTCGCATTCGTGATGGTTCCAATAGACTTCCTGTTGTCTTGGCATATCGAAATAGCTTTTGGGATATAGCTAGGTATCTCTATTCTAAAACTCCAGTGGAAGATTTAAATGGCTCTAATGGCGCAACACTTGTTTCTCAATGTTTTTATGCAAAACAATATGATATTGCGTGGGATCTAATTCATCGGTGCCCAAGCTTGATCACTACTAAAGACCTCTTTGGGGAATCTCCATTACTTGCATTGGCTTCTGTCCCTGCTGCATTCCAGAGTGGCATGCAACTAATATTCTGGAAAAAGTGGATCTATAACCGTATTCAAATACCTGATTCTCCTGATTTCAATGATGATAATGATACTCGTATAACAATTGAGGATGGGAATGACAATATCGACACCAACAATAATAACACCATCGCCATTTCAACATTATCATCTATATTTCACAAGAATTTCATATGGTCAGGAATCAACCACATATATGAAATGAAACTAGTTCATACCCGATCTACAGAATTTCTTAACTGCATGTGTGATGGGATAAAGCATCTGAACGATGAACAAATGAAAGATGGAGTTCTACAATCATCAGTCTTACGAGCTGTCGAGAGAGGAATTCCTGAGTTTGTTATTGGCATATGTAATGCGAATCGAGAACTTGCTCGAGGCACTAATGAAATGGGACGGAGCATATTTCACTATGCCATTAAATGTCGACAAGAAAAAGTTTACAACCTTATTTATGGGCATGACATGAGAAATGCGATTTCAAGTCTTACAGACGCATATAATAATAACATGTTACATATGGCAGCATTGTTGTCTCCATTTGCACAACTCAATCGCATTCCAAGTGCAGCTTTACAAATGCAGAGAGAATTACAATGGTTCAAGGAGGTGGAAACTGTTGTAGCTCCCAAGGCCCGTGAGTTCATAAATTGGACCGATTATATGACACCAAGGGATCTATTTACAAAACATCACAAAAATTTGTTGAAGGAAGGAGAAAAATGGATGAAAGATACGGCTACTTCTTTTACAGTGGTTGGGGCTCTTATTGTTACCCTCATGTTTGCCACAGCATTTACGGTTCCCGGAGGATATAAAGAAGATACAGGTTTTCCAATATTCATAAATGAAAGGTTGTTTATGGTATTTATAATTTCAGATGCCATTTCATTATTTTCAGCTACAACATCATCGTTGATGTTTTTGGGAATCCTCACATCACGTTATGCAGAAGATGATTTTCTCAAATCTCTACCCACAAAGATGATAATAGGGCTATTCACCCTTTTTTTCTCCATTGCAACCATGATGATAGCATTTTCTGCTGCCCTGATACTTATACTTCAAGAAAAACCATGGACTGCCATTCCAATTATTTTGTTATCTTGTGTTCCGGTTACCTTATTCGCTGTTATAAAAATTCCCCTGCTTATTGAAATTATTCTTTCTACTTACGGACAGGGAATATTTGATAAGAATTGTAAGAAATGGTTATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

541

Amino Acids

61.45

Weight (kDa)

8.22

Isoelectric Point (pI)

33.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PGG PF13962 375 - 487 6.9e-24 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000027)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18670 AT3G18670 AT3G54065
fragaria_vesca FvH4_1g26570 FvH4_1g26570 FvH4_5g19270 FvH4_5g19273 FvH4_5g35840 FvH4_5g36340 FvH4_5g36630 FvH4_5g37181 FvH4_5g37182 FvH4_5g37185 FvH4_5g37240 FvH4_5g37260 FvH4_6g21440 FvH4_6g44571 FvH4_6g44572 FvH4_6g44610 FvH4_6g44620 FvH4_6g44650 FvH4_6g44660 FvH4_6g45151 FvH4_6g45152 FvH4_6g45152 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45154 FvH4_6g51440 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090
malus_domestica MD00G1010300.v1.1 MD00G1010400.v1.1 MD00G1010500.v1.1 MD00G1011000.v1.1 MD00G1011200.v1.1 MD00G1011500.v1.1 MD00G1011900.v1.1 MD03G1133900.v1.1 MD03G1134100.v1.1 MD09G1086300.v1.1 MD09G1086500.v1.1 MD09G1086900.v1.1 MD09G1087000.v1.1 MD09G1088000.v1.1 MD09G1088100.v1.1 MD09G1088200.v1.1 MD09G1088300.v1.1 MD09G1089000.v1.1 MD09G1089300.v1.1 MD09G1133800.v1.1 MD16G1219400.v1.1 MD17G1027900.v1.1 MD17G1028400.v1.1 MD17G1028600.v1.1 MD17G1028700.v1.1 MD17G1028900.v1.1 MD17G1029000.v1.1 MD17G1029100.v1.1 MD17G1029200.v1.1 MD17G1075400.v1.1 MD17G1076000.v1.1 MD17G1077000.v1.1 MD17G1077100.v1.1 MD17G1077800.v1.1 MD17G1078000.v1.1 MD17G1078100.v1.1 MD17G1078300.v1.1 MD17G1100900.v1.1 MD17G1101100.v1.1 MD17G1101400.v1.1 MD17G1104200.v1.1 MD17G1104500.v1.1 MD17G1121300.v1.1 MD17G1121600.v1.1 MD17G1121900.v1.1 MD17G1122700.v1.1 MD17G1218800.v1.1
prunus_persica Prupe.2G033800_v2.0.a1 Prupe.2G033900_v2.0.a1 Prupe.2G080300_v2.0.a1 Prupe.2G080700_v2.0.a1 Prupe.2G080900_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G082000_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082200_v2.0.a1 Prupe.2G082300_v2.0.a1 Prupe.2G082700_v2.0.a1 Prupe.2G082800_v2.0.a1 Prupe.2G082900_v2.0.a1 Prupe.3G235600_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236800_v2.0.a1 Prupe.3G237000_v2.0.a1 Prupe.3G237100_v2.0.a1 Prupe.3G237300_v2.0.a1 Prupe.3G237400_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.4G282500_v2.0.a1 Prupe.4G282500_v2.0.a1
pyrus_communis pycom03g08990 pycom03g09000 pycom09g01180 pycom09g01190 pycom09g01220 pycom09g01230 pycom09g01360 pycom09g01370 pycom09g01380 pycom09g01410 pycom09g05500 pycom11g10280 pycom11g10290 pycom11g10310 pycom16g18270 pycom16g18280 pycom17g02280 pycom17g02290 pycom17g02300 pycom17g02360 pycom17g02390 pycom17g02410 pycom17g02440 pycom17g02460 pycom17g02470 pycom17g02480 pycom17g02510 pycom17g02530 pycom17g02540 pycom17g02550 pycom17g02560 pycom17g02570 pycom17g02580 pycom17g02630 pycom17g02640 pycom17g04970 pycom17g04980 pycom17g05010 pycom17g07090 pycom17g07620 pycom17g07630 pycom17g07640 pycom17g07650 pycom17g07660 pycom17g07740 pycom17g07760 pycom17g07770 pycom17g09580 pycom17g11170 pycom17g11200 pycom17g11220 pycom17g11240 pycom17g11250 pycom17g11300 pycom17g11340 pycom17g11380 pycom17g11440
rosa_chinensis RchiOBHm_Chr1g0332901 RchiOBHm_Chr1g0338981 RchiOBHm_Chr1g0338991 RchiOBHm_Chr1g0341201 RchiOBHm_Chr1g0341211 RchiOBHm_Chr1g0342721 RchiOBHm_Chr1g0343191 RchiOBHm_Chr2g0146761 RchiOBHm_Chr2g0161791 RchiOBHm_Chr2g0161801 RchiOBHm_Chr2g0161841 RchiOBHm_Chr2g0162041 RchiOBHm_Chr2g0162651 RchiOBHm_Chr2g0162691 RchiOBHm_Chr2g0162701 RchiOBHm_Chr2g0162711 RchiOBHm_Chr2g0162721 RchiOBHm_Chr2g0162811 RchiOBHm_Chr2g0162831 RchiOBHm_Chr2g0162841 RchiOBHm_Chr4g0416381 RchiOBHm_Chr4g0416391 RchiOBHm_Chr5g0075981 RchiOBHm_Chr6g0276101 RchiOBHm_Chr7g0214581 RchiOBHm_Chr7g0214631 RchiOBHm_Chr7g0214651 RchiOBHm_Chr7g0214721 RchiOBHm_Chr7g0223161 RchiOBHm_Chr7g0230661 RchiOBHm_Chr7g0230751 RchiOBHm_Chr7g0230781 RchiOBHm_Chr7g0234581 RchiOBHm_Chr7g0234601 RchiOBHm_Chr7g0237561 RchiOBHm_Chr7g0237571 RchiOBHm_Chr7g0238781 RchiOBHm_Chr7g0238811 RchiOBHm_Chr7g0242161 RchiOBHm_Chr7g0242401 RchiOBHm_Chr7g0242451 RchiOBHm_Chr7g0242921 RchiOBHm_Chr7g0242981 RchiOBHm_Chr7g0243111 RchiOBHm_Chr7g0243251 RchiOBHm_Chr7g0243331
rosa_laevigata RLG00000000803 RLG00000000807 RLG00000000809 RLG00000000811 RLG00000000814 RLG00000000854 RLG00000000859 RLG00000000864 RLG00000000994 RLG00000000995 RLG00000001458 RLG00000001461 RLG00000001474 RLG00000001476 RLG00000002729 RLG00000002730 RLG00000003505 RLG00000008871 RLG00000008873 RLG00000018513 RLG00000021300 RLG00000021303 RLG00000021318 RLG00000021356 RLG00000021357 RLG00000029070 RLG00000029071 RLG00000029171 RLG00000029189 RLG00000029190 RLG00000029640 RLG00000034635
rosa_multiflora Rmu_co8149086.1_g000001 Rmu_co8460577.1_g000001 Rmu_sc0000429.1_g000062 Rmu_sc0000429.1_g000071 Rmu_sc0000429.1_g000081 Rmu_sc0000863.1_g000020 Rmu_sc0001488.1_g000011 Rmu_sc0001545.1_g000007 Rmu_sc0001849.1_g000068 Rmu_sc0001993.1_g000003 Rmu_sc0002222.1_g000002 Rmu_sc0002308.1_g000053 Rmu_sc0002308.1_g000069 Rmu_sc0002480.1_g000007 Rmu_sc0003179.1_g000041 Rmu_sc0004213.1_g000011 Rmu_sc0007101.1_g000012 Rmu_sc0008565.1_g000011 Rmu_sc0009298.1_g000003 Rmu_sc0010407.1_g000009 Rmu_sc0010407.1_g000013 Rmu_sc0026966.1_g000004 Rmu_ssc0000152.1_g000012 Rmu_ssc0000152.1_g000014 Rmu_ssc0000295.1_g000021 Rmu_ssc0000295.1_g000026
rosa_roxburghii Rroxscaffold_1G00029600 Rroxscaffold_2G00087790 Rroxscaffold_2G00087800 Rroxscaffold_2G00088360 Rroxscaffold_2G00088500 Rroxscaffold_2G00088530 Rroxscaffold_2G00088590 Rroxscaffold_3G00221570 Rroxscaffold_3G00222190 Rroxscaffold_3G00222240 Rroxscaffold_3G00222880 Rroxscaffold_3G00222900 Rroxscaffold_3G00223990 Rroxscaffold_3G00229750 Rroxscaffold_3G00229760 Rroxscaffold_3G00245140 Rroxscaffold_3G00245150 Rroxscaffold_3G00245200 Rroxscaffold_3G00253520 Rroxscaffold_3G00253530 Rroxscaffold_4G00294500 Rroxscaffold_4G00311800 Rroxscaffold_4G00311830 Rroxscaffold_4G00311850 Rroxscaffold_4G00313180 Rroxscaffold_4G00313210 Rroxscaffold_4G00316270 Rroxscaffold_4G00317910 Rroxscaffold_4G00317920 Rroxscaffold_5G00349290 Rroxscaffold_5G00349300 Rroxscaffold_5G00349310 Rroxscaffold_5G00351950 Rroxscaffold_5G00351960 Rroxscaffold_5G00353390 Rroxscaffold_7G00192540
rosa_rugosa Rorug01G0102500 Rorug01G0102600 Rorug01G0146400.1 Rorug01G0146500.1 Rorug01G0159400.1 Rorug01G0159500.1 Rorug02G0491900 Rorug02G0492000 Rorug02G0492100 Rorug02G0492200 Rorug02G0492300 Rorug02G0492400 Rorug02G0492500 Rorug02G0492700 Rorug02G0498500 Rorug02G0498600 Rorug02G0498800 Rorug04G0006900 Rorug04G0053700 Rorug06G0002000 Rorug06G0002100 Rorug07G0304700 Rorug07G0304800 Rorug07G0304800 Rorug07G0304800 Rorug07G0305300 Rorug07G0305400 Rorug07G0305500 Rorug07G0305500 Rorug07G0318300 Rorug07G0318600 Rorug07G0323600
rosa_samantha Rh1AG128900 Rh1AG162500 Rh1AG163000 Rh1AG164000 Rh1AG164700 Rh1AG173200 Rh1AG173300 Rh1AG173800 Rh1BG098100 Rh1BG129800 Rh1BG130600 Rh1BG141300 Rh1BG141500 Rh1BG141600 Rh1CG122700 Rh1CG151900 Rh1CG152400 Rh1CG153100 Rh1CG153500 Rh1CG161400 Rh1CG161600 Rh1DG134200 Rh1DG173500 Rh1DG173700 Rh2AG558100 Rh2AG558500 Rh2AG560200 Rh2AG564700 Rh2AG564800 Rh2BG465600 Rh2BG571700 Rh2BG572000 Rh2BG573500 Rh2CG439800 Rh2CG541800 Rh2CG542100 Rh2CG542200 Rh2CG543800 Rh2CG547300 Rh2DG474700 Rh2DG580600 Rh2DG580900 Rh2DG581200 Rh2DG581700 Rh2DG581800 Rh2DG583500 Rh2DG587200 Rh2DG587300 Rh2DG587400 Rh4AG128900 Rh4AG203800 Rh4AG319900 Rh4AG320000 Rh4BG122200 Rh4BG201100 Rh4CG136000 Rh4DG122400 Rh4DG201100 Rh4DG323600 Rh6BG077000 Rh6DG206200 Rh7AG282300 Rh7AG282500 Rh7AG283400 Rh7AG358600 Rh7AG414500 Rh7AG415200 Rh7AG415500 Rh7AG461700 Rh7AG469300 Rh7AG477800 Rh7BG273900 Rh7BG274000 Rh7BG390400 Rh7BG390500 Rh7BG391500 Rh7BG391800 Rh7BG408300 Rh7BG432000 Rh7BG439200 Rh7BG449200 Rh7BG449900 Rh7BG450400 Rh7BG450500 Rh7CG220900 Rh7CG301600 Rh7CG302700 Rh7CG377000 Rh7CG433900 Rh7CG434200 Rh7CG478800 Rh7DG286200 Rh7DG354000 Rh7DG424600 Rh7DG448000 Rh7DG462800 Rh7DG462900
rosa_wichuraiana Rw0G003440 Rw0G011970 Rw0G017120 Rw0G017130 Rw0G017140 Rw0G018470 Rw0G018480 Rw0G020440 Rw1G010470 Rw2G046180 Rw2G046210 Rw2G046230 Rw2G046390 Rw2G046400 Rw2G046710 Rw2G046720 Rw2G046730 Rw3G025310 Rw4G010410 Rw4G017250 Rw6G018270 Rw7G018180 Rw7G024130 Rw7G024160 Rw7G024170 Rw7G034060 Rw7G034250 Rw7G034260 Rw7G034400 Rw7G034410 Rw7G038210 Rw7G039020 Rw7G039060 Rw7G039280 Rw7G039400 Rw7G039470 Rw7G039880 Rw7G039890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1277, 1541
AccB1I GGYRCC 1 cut(s) 306
AccI GTMKAC 1 cut(s) 832
AclWI GGATC 3 cut(s) 300, 428, 1089
AcsI RAATTY 5 cut(s) 568, 632, 732, 1105, 1545
AfiI CCNNNNNNNGG 1 cut(s) 340
AflIII ACRYGT 1 cut(s) 915
AgsI TTSAA 9 cut(s) 19, 437, 460, 543, 888, 1009, 1114, 1472, 1562
AhlI ACTAGT 1 cut(s) 610
AjuI GAANNNNNNNTTGG 2 cut(s) 160, 192
AluBI AGCT 7 cut(s) 174, 188, 315, 719, 977, 1031, 1307
AluI AGCT 7 cut(s) 174, 188, 315, 719, 977, 1031, 1307
Alw26I GTCTC 1 cut(s) 945
AlwI GGATC 3 cut(s) 300, 428, 1089
Ama87I CYCGRG 1 cut(s) 780
AoxI GGCC 1 cut(s) 1038
ApeKI GCWGC 4 cut(s) 377, 929, 974, 1451
ApoI RAATTY 5 cut(s) 568, 632, 732, 1105, 1545
Asp700I GAANNNNTTC 1 cut(s) 1566
AspLEI GCGC 1 cut(s) 242
AspS9I GGNCC 2 cut(s) 1039, 1059
AsuC2I CCSGG 1 cut(s) 1212
AsuHPI GGTGA 1 cut(s) 1399
AvaI CYCGRG 1 cut(s) 780
AvaII GGWCC 1 cut(s) 1059
BaeGI GKGCMC 1 cut(s) 311
BanI GGYRCC 1 cut(s) 306
BanII GRGCYC 1 cut(s) 1171
BbvI GCAGC 4 cut(s) 364, 941, 986, 1438
BccI CCATC 6 cut(s) 29, 125, 488, 539, 647, 683
BceAI ACGGC 1 cut(s) 1158
BclI TGATCA 1 cut(s) 318
BcnI CCSGG 1 cut(s) 1212
BcoDI GTCTC 1 cut(s) 945
BcuI ACTAGT 1 cut(s) 610
BfaI CTAG 2 cut(s) 189, 611
BfmI CTRYAG 1 cut(s) 627
BisI GCNGC 4 cut(s) 378, 930, 975, 1452
BlsI GCNGC 4 cut(s) 379, 931, 976, 1453
Bme1390I CCNGG 1 cut(s) 1212
Bme18I GGWCC 1 cut(s) 1059
BmeT110I CYCGRG 1 cut(s) 780
BmgT120I GGNCC 2 cut(s) 1039, 1059
BmiI GGNNCC 3 cut(s) 136, 308, 1209
BmrFI CCNGG 1 cut(s) 1212
BmsI GCATC 2 cut(s) 673, 1276
BpmI CTGGAG 1 cut(s) 195
BpuMI CCSGG 1 cut(s) 1212
BsaJI CCNNGG 3 cut(s) 1035, 1076, 1481
BsaWI WCCGGW 1 cut(s) 1519
Bsc4I CCNNNNNNNGG 1 cut(s) 340
Bse1I ACTGG 1 cut(s) 212
Bse3DI GCAATG 1 cut(s) 1422
BseDI CCNNGG 3 cut(s) 1035, 1076, 1481
BseGI GGATG 2 cut(s) 499, 1137
BseLI CCNNNNNNNGG 1 cut(s) 340
BseMI GCAATG 1 cut(s) 1422
BseMII CTCAG 1 cut(s) 729
BseNI ACTGG 1 cut(s) 212
BseSI GKGCMC 1 cut(s) 311
BseXI GCAGC 4 cut(s) 364, 941, 986, 1438
BsgI GTGCAG 1 cut(s) 993
BshFI GGCC 1 cut(s) 1040
BshNI GGYRCC 1 cut(s) 306
BsiHKCI CYCGRG 1 cut(s) 780
BsiSI CCGG 2 cut(s) 1212, 1520
BslFI GGGAC 2 cut(s) 356, 813
BslI CCNNNNNNNGG 1 cut(s) 340
BsmAI GTCTC 1 cut(s) 945
BsmFI GGGAC 2 cut(s) 356, 813
BsmI GAATGC 3 cut(s) 123, 380, 963
BsnI GGCC 1 cut(s) 1040
BsoBI CYCGRG 1 cut(s) 780
Bsp1286I GDGCHC 2 cut(s) 311, 1171
Bsp143I GATC 6 cut(s) 21, 292, 318, 420, 623, 1081
Bsp19I CCATGG 1 cut(s) 1481
BspANI GGCC 1 cut(s) 1040
BspCNI CTCAG 1 cut(s) 730
BspLI GGNNCC 3 cut(s) 136, 308, 1209
BspPI GGATC 3 cut(s) 300, 428, 1089
BspT107I GGYRCC 1 cut(s) 306
BsrDI GCAATG 1 cut(s) 1422
BsrI ACTGG 1 cut(s) 212
BssECI CCNNGG 3 cut(s) 1035, 1076, 1481
BssMI GATC 6 cut(s) 21, 292, 318, 420, 623, 1081
BssT1I CCWWGG 3 cut(s) 1035, 1076, 1481
Bst4CI ACNGT 4 cut(s) 431, 1024, 1159, 1207
BstAPI GCANNNNNTGC 1 cut(s) 1448
BstC8I GCNNGC 1 cut(s) 395
BstDEI CTNAG 1 cut(s) 738
BstDSI CCRYGG 1 cut(s) 1481
BstEII GGTNACC 1 cut(s) 1522
BstF5I GGATG 2 cut(s) 499, 1137
BstHHI GCGC 1 cut(s) 242
BstKTI GATC 6 cut(s) 24, 295, 321, 423, 626, 1084
BstMAI GTCTC 1 cut(s) 945
BstMBI GATC 6 cut(s) 21, 292, 318, 420, 623, 1081
BstMWI GCNNNNNNNGC 3 cut(s) 237, 1037, 1448
BstNSI RCATGY 3 cut(s) 397, 649, 919
BstPI GGTNACC 1 cut(s) 1522
BstSCI CCNGG 1 cut(s) 1210
BstSFI CTRYAG 1 cut(s) 627
BstSLI GKGCMC 1 cut(s) 311
BstV1I GCAGC 4 cut(s) 364, 941, 986, 1438
BstX2I RGATCY 3 cut(s) 292, 420, 1081
BstYI RGATCY 3 cut(s) 292, 420, 1081
BsuRI GGCC 1 cut(s) 1040
BtgI CCRYGG 1 cut(s) 1481
BtgZI GCGATG 1 cut(s) 517
BtsCI GGATG 2 cut(s) 499, 1137
BtsIMutI CAGTG 2 cut(s) 219, 1164
Cac8I GCNNGC 1 cut(s) 395
CfoI GCGC 1 cut(s) 242
Cfr13I GGNCC 2 cut(s) 1039, 1059
CseI GACGC 1 cut(s) 908
CviAII CATG 9 cut(s) 94, 394, 646, 866, 871, 916, 1186, 1432, 1482
DdeI CTNAG 1 cut(s) 738
DpnI GATC 6 cut(s) 23, 294, 320, 422, 625, 1083
DpnII GATC 6 cut(s) 21, 292, 318, 420, 623, 1081
DraI TTTAAA 1 cut(s) 225
Eco130I CCWWGG 3 cut(s) 1035, 1076, 1481
Eco24I GRGCYC 1 cut(s) 1171
Eco47I GGWCC 1 cut(s) 1059
Eco88I CYCGRG 1 cut(s) 780
Eco91I GGTNACC 1 cut(s) 1522
EcoO65I GGTNACC 1 cut(s) 1522
EcoRI GAATTC 1 cut(s) 732
EcoT14I CCWWGG 3 cut(s) 1035, 1076, 1481
EcoT22I ATGCAT 1 cut(s) 95
EcoT38I GRGCYC 1 cut(s) 1171
ErhI CCWWGG 3 cut(s) 1035, 1076, 1481
FaeI CATG 9 cut(s) 97, 397, 649, 869, 874, 919, 1189, 1435, 1485
FalI AAGNNNNNCTT 3 cut(s) 31, 961, 993
FaqI GGGAC 2 cut(s) 356, 813
FatI CATG 9 cut(s) 93, 393, 645, 865, 870, 915, 1185, 1431, 1481
FauNDI CATATG 3 cut(s) 575, 755, 924
FbaI TGATCA 1 cut(s) 318
FblI GTMKAC 1 cut(s) 832
Fnu4HI GCNGC 4 cut(s) 378, 930, 975, 1452
FokI GGATG 2 cut(s) 506, 1144
FriOI GRGCYC 1 cut(s) 1171
Fsp4HI GCNGC 4 cut(s) 378, 930, 975, 1452
FspBI CTAG 2 cut(s) 189, 611
GlaI GCGC 1 cut(s) 241
GluI GCNGC 4 cut(s) 378, 930, 975, 1452
GsuI CTGGAG 1 cut(s) 195
HaeIII GGCC 1 cut(s) 1040
HapII CCGG 2 cut(s) 1212, 1520
HgaI GACGC 1 cut(s) 908
HhaI GCGC 1 cut(s) 242
Hin1II CATG 9 cut(s) 97, 397, 649, 869, 874, 919, 1189, 1435, 1485
Hin6I GCGC 1 cut(s) 240
HinP1I GCGC 1 cut(s) 240
HincII GTYRAC 1 cut(s) 833
HindII GTYRAC 1 cut(s) 833
HindIII AAGCTT 1 cut(s) 313
HinfI GANTC 5 cut(s) 344, 446, 585, 766, 1335
HpaII CCGG 2 cut(s) 1212, 1520
HphI GGTGA 1 cut(s) 1399
Hpy166II GTNNAC 2 cut(s) 833, 847
Hpy188I TCNGA 2 cut(s) 669, 1285
Hpy188III TCNNGA 9 cut(s) 128, 385, 409, 452, 582, 724, 737, 770, 1472
Hpy8I GTNNAC 2 cut(s) 833, 847
HpyAV CCTTC 2 cut(s) 1108, 1112
HpyCH4III ACNGT 4 cut(s) 431, 1024, 1159, 1207
HpyCH4IV ACGT 1 cut(s) 1348
HpyF10VI GCNNNNNNNGC 3 cut(s) 237, 1037, 1448
HpyF3I CTNAG 1 cut(s) 738
HpySE526I ACGT 1 cut(s) 1348
Hsp92II CATG 9 cut(s) 97, 397, 649, 869, 874, 919, 1189, 1435, 1485
HspAI GCGC 1 cut(s) 240
Ksp22I TGATCA 1 cut(s) 318
Kzo9I GATC 6 cut(s) 21, 292, 318, 420, 623, 1081
LmnI GCTCC 2 cut(s) 804, 1036
Lsp1109I GCAGC 4 cut(s) 364, 941, 986, 1438
LweI GCATC 2 cut(s) 673, 1276
MaeI CTAG 2 cut(s) 189, 611
MaeII ACGT 1 cut(s) 1348
MaeIII GTNAC 3 cut(s) 918, 1177, 1522
MalI GATC 6 cut(s) 23, 294, 320, 422, 625, 1083
MboI GATC 6 cut(s) 21, 292, 318, 420, 623, 1081
MboII GAAGA 4 cut(s) 31, 230, 1238, 1370
MfeI CAATTG 1 cut(s) 486
MflI RGATCY 3 cut(s) 292, 420, 1081
MhlI GDGCHC 2 cut(s) 311, 1171
MnlI CCTC 8 cut(s) 344, 484, 722, 776, 1006, 1193, 1208, 1349
Mph1103I ATGCAT 1 cut(s) 95
MroXI GAANNNNTTC 1 cut(s) 1566
MseI TTAA 4 cut(s) 87, 224, 639, 825
MslI CAYNNNNRTG 2 cut(s) 597, 1388
MspI CCGG 2 cut(s) 1212, 1520
MspR9I CCNGG 1 cut(s) 1212
MunI CAATTG 1 cut(s) 486
Mva1269I GAATGC 3 cut(s) 123, 380, 963
MwoI GCNNNNNNNGC 3 cut(s) 237, 1037, 1448
NciI CCSGG 1 cut(s) 1212
NcoI CCATGG 1 cut(s) 1481
NdeI CATATG 3 cut(s) 575, 755, 924
NdeII GATC 6 cut(s) 21, 292, 318, 420, 623, 1081
NlaIII CATG 9 cut(s) 97, 397, 649, 869, 874, 919, 1189, 1435, 1485
NlaIV GGNNCC 3 cut(s) 136, 308, 1209
NsiI ATGCAT 1 cut(s) 95
NspI RCATGY 3 cut(s) 397, 649, 919
PaeI GCATGC 1 cut(s) 397
PaeR7I CTCGAG 1 cut(s) 780
PciI ACATGT 1 cut(s) 915
PctI GAATGC 3 cut(s) 123, 380, 963
PdmI GAANNNNTTC 1 cut(s) 1566
PfeI GAWTC 5 cut(s) 344, 446, 585, 766, 1335
PfoI TCCNGGA 1 cut(s) 1210
PkrI GCNGC 4 cut(s) 379, 931, 976, 1453
PscI ACATGT 1 cut(s) 915
PsiI TTATAA 2 cut(s) 1277, 1541
PspEI GGTNACC 1 cut(s) 1522
PspN4I GGNNCC 3 cut(s) 136, 308, 1209
PspPI GGNCC 2 cut(s) 1039, 1059
PspXI VCTCGAGB 1 cut(s) 780
PsuI RGATCY 3 cut(s) 292, 420, 1081
RseI CAYNNNNRTG 2 cut(s) 597, 1388
SalI GTCGAC 1 cut(s) 831
SaqAI TTAA 4 cut(s) 87, 224, 639, 825
SatI GCNGC 4 cut(s) 378, 930, 975, 1452
Sau3AI GATC 6 cut(s) 21, 292, 318, 420, 623, 1081
Sau96I GGNCC 2 cut(s) 1039, 1059
ScrFI CCNGG 1 cut(s) 1212
SduI GDGCHC 2 cut(s) 311, 1171
SfaNI GCATC 2 cut(s) 673, 1276
SfcI CTRYAG 1 cut(s) 627
Sfr274I CTCGAG 1 cut(s) 780
SinI GGWCC 1 cut(s) 1059
SlaI CTCGAG 1 cut(s) 780
SmiI ATTTAAAT 1 cut(s) 225
SmiMI CAYNNNNRTG 2 cut(s) 597, 1388
SmlI CTYRAG 1 cut(s) 780
SmoI CTYRAG 1 cut(s) 780
SpeI ACTAGT 1 cut(s) 610
SphI GCATGC 1 cut(s) 397
SspI AATATT 3 cut(s) 405, 1245, 1593
SspMI CTAG 2 cut(s) 189, 611
StyD4I CCNGG 1 cut(s) 1210
StyI CCWWGG 3 cut(s) 1035, 1076, 1481
SwaI ATTTAAAT 1 cut(s) 225
TaaI ACNGT 4 cut(s) 431, 1024, 1159, 1207
TaiI ACGT 1 cut(s) 1351
TaqI TCGA 6 cut(s) 166, 510, 723, 769, 781, 832
TaqII GACCGA 1 cut(s) 1076
TfiI GAWTC 5 cut(s) 344, 446, 585, 766, 1335
Tru1I TTAA 4 cut(s) 87, 224, 639, 825
Tru9I TTAA 4 cut(s) 87, 224, 639, 825
TscAI CASTG 2 cut(s) 219, 1164
TseI GCWGC 4 cut(s) 377, 929, 974, 1451
TspGWI ACGGA 2 cut(s) 817, 1596
TspRI CASTG 2 cut(s) 219, 1164
VpaK11BI GGWCC 1 cut(s) 1059
XapI RAATTY 5 cut(s) 568, 632, 732, 1105, 1545
XceI RCATGY 3 cut(s) 397, 649, 919
XhoI CTCGAG 1 cut(s) 780
XmiI GTMKAC 1 cut(s) 832
XmnI GAANNNNTTC 1 cut(s) 1566
XspI CTAG 2 cut(s) 189, 611
Zsp2I ATGCAT 1 cut(s) 95
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.