protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 213 |
| AciI | CCGC | 3 cut(s) | 160, 213, 218 |
| AclI | AACGTT | 1 cut(s) | 130 |
| AcoI | YGGCCR | 1 cut(s) | 144 |
| AcsI | RAATTY | 2 cut(s) | 101, 440 |
| AfaI | GTAC | 1 cut(s) | 413 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 53, 142 |
| AgsI | TTSAA | 5 cut(s) | 35, 72, 128, 305, 439 |
| AluBI | AGCT | 5 cut(s) | 95, 185, 223, 326, 391 |
| AluI | AGCT | 5 cut(s) | 95, 185, 223, 326, 391 |
| Alw21I | GWGCWC | 1 cut(s) | 225 |
| Alw26I | GTCTC | 1 cut(s) | 115 |
| AoxI | GGCC | 1 cut(s) | 144 |
| ApoI | RAATTY | 2 cut(s) | 101, 440 |
| AspLEI | GCGC | 1 cut(s) | 68 |
| AspS9I | GGNCC | 1 cut(s) | 56 |
| AsuHPI | GGTGA | 1 cut(s) | 163 |
| AvaII | GGWCC | 1 cut(s) | 56 |
| BanII | GRGCYC | 1 cut(s) | 225 |
| Bbv12I | GWGCWC | 1 cut(s) | 225 |
| BccI | CCATC | 1 cut(s) | 386 |
| BceAI | ACGGC | 1 cut(s) | 131 |
| BcoDI | GTCTC | 1 cut(s) | 115 |
| BfoI | RGCGCY | 1 cut(s) | 69 |
| Bme18I | GGWCC | 1 cut(s) | 56 |
| BmgT120I | GGNCC | 1 cut(s) | 56 |
| BmsI | GCATC | 2 cut(s) | 200, 288 |
| Bpu10I | CCTNAGC | 2 cut(s) | 209, 352 |
| BsaJI | CCNNGG | 1 cut(s) | 460 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 53, 142 |
| BseDI | CCNNGG | 1 cut(s) | 460 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 53, 142 |
| BseMII | CTCAG | 2 cut(s) | 200, 366 |
| BseRI | GAGGAG | 2 cut(s) | 261, 264 |
| BshFI | GGCC | 1 cut(s) | 146 |
| BsiHKAI | GWGCWC | 1 cut(s) | 225 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 53, 142 |
| BsmAI | GTCTC | 1 cut(s) | 115 |
| BsnI | GGCC | 1 cut(s) | 146 |
| Bsp1286I | GDGCHC | 1 cut(s) | 225 |
| Bsp143I | GATC | 1 cut(s) | 415 |
| BspACI | CCGC | 3 cut(s) | 160, 213, 218 |
| BspANI | GGCC | 1 cut(s) | 146 |
| BspCNI | CTCAG | 2 cut(s) | 201, 365 |
| BsrBI | CCGCTC | 1 cut(s) | 213 |
| BssECI | CCNNGG | 1 cut(s) | 460 |
| BssMI | GATC | 1 cut(s) | 415 |
| BssT1I | CCWWGG | 1 cut(s) | 460 |
| Bst4CI | ACNGT | 2 cut(s) | 254, 301 |
| BstC8I | GCNNGC | 1 cut(s) | 48 |
| BstDEI | CTNAG | 2 cut(s) | 209, 352 |
| BstH2I | RGCGCY | 1 cut(s) | 69 |
| BstHHI | GCGC | 1 cut(s) | 68 |
| BstKTI | GATC | 1 cut(s) | 418 |
| BstMAI | GTCTC | 1 cut(s) | 115 |
| BstMBI | GATC | 1 cut(s) | 415 |
| BsuRI | GGCC | 1 cut(s) | 146 |
| Cac8I | GCNNGC | 1 cut(s) | 48 |
| CfoI | GCGC | 1 cut(s) | 68 |
| Cfr13I | GGNCC | 1 cut(s) | 56 |
| Csp6I | GTAC | 1 cut(s) | 412 |
| CviAII | CATG | 2 cut(s) | 62, 114 |
| CviJI | RGCY | 8 cut(s) | 5, 50, 95, 146, 185, 223, 326, 391 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 50, 95, 146, 185, 223, 326, 391 |
| CviQI | GTAC | 1 cut(s) | 412 |
| DdeI | CTNAG | 2 cut(s) | 209, 352 |
| DpnI | GATC | 1 cut(s) | 417 |
| DpnII | GATC | 1 cut(s) | 415 |
| EaeI | YGGCCR | 1 cut(s) | 144 |
| Ecl136II | GAGCTC | 1 cut(s) | 223 |
| Eco130I | CCWWGG | 1 cut(s) | 460 |
| Eco24I | GRGCYC | 1 cut(s) | 225 |
| Eco32I | GATATC | 1 cut(s) | 11 |
| Eco47I | GGWCC | 1 cut(s) | 56 |
| Eco53kI | GAGCTC | 1 cut(s) | 223 |
| EcoICRI | GAGCTC | 1 cut(s) | 223 |
| EcoO109I | RGGNCCY | 1 cut(s) | 56 |
| EcoRV | GATATC | 1 cut(s) | 11 |
| EcoT14I | CCWWGG | 1 cut(s) | 460 |
| EcoT38I | GRGCYC | 1 cut(s) | 225 |
| ErhI | CCWWGG | 1 cut(s) | 460 |
| FaeI | CATG | 2 cut(s) | 65, 117 |
| FatI | CATG | 2 cut(s) | 61, 113 |
| FriOI | GRGCYC | 1 cut(s) | 225 |
| GlaI | GCGC | 1 cut(s) | 67 |
| HaeII | RGCGCY | 1 cut(s) | 69 |
| HaeIII | GGCC | 1 cut(s) | 146 |
| HhaI | GCGC | 1 cut(s) | 68 |
| Hin1II | CATG | 2 cut(s) | 65, 117 |
| Hin6I | GCGC | 1 cut(s) | 66 |
| HinP1I | GCGC | 1 cut(s) | 66 |
| HindIII | AAGCTT | 1 cut(s) | 183 |
| HphI | GGTGA | 1 cut(s) | 163 |
| Hpy188III | TCNNGA | 1 cut(s) | 208 |
| HpyAV | CCTTC | 2 cut(s) | 210, 378 |
| HpyCH4III | ACNGT | 2 cut(s) | 254, 301 |
| HpyCH4IV | ACGT | 1 cut(s) | 130 |
| HpyF3I | CTNAG | 2 cut(s) | 209, 352 |
| HpySE526I | ACGT | 1 cut(s) | 130 |
| Hsp92II | CATG | 2 cut(s) | 65, 117 |
| HspAI | GCGC | 1 cut(s) | 66 |
| Kzo9I | GATC | 1 cut(s) | 415 |
| LmnI | GCTCC | 1 cut(s) | 220 |
| LpnPI | CCDG | 5 cut(s) | 60, 217, 221, 339, 458 |
| LweI | GCATC | 2 cut(s) | 200, 288 |
| MaeII | ACGT | 1 cut(s) | 130 |
| MaeIII | GTNAC | 3 cut(s) | 22, 148, 295 |
| MalI | GATC | 1 cut(s) | 417 |
| MbiI | CCGCTC | 1 cut(s) | 213 |
| MboI | GATC | 1 cut(s) | 415 |
| MboII | GAAGA | 2 cut(s) | 47, 323 |
| MhlI | GDGCHC | 1 cut(s) | 225 |
| MluCI | AATT | 6 cut(s) | 101, 123, 140, 226, 420, 440 |
| MnlI | CCTC | 6 cut(s) | 69, 279, 282, 285, 329, 382 |
| MseI | TTAA | 5 cut(s) | 41, 122, 384, 450, 456 |
| MslI | CAYNNNNRTG | 1 cut(s) | 291 |
| NdeII | GATC | 1 cut(s) | 415 |
| NlaIII | CATG | 2 cut(s) | 65, 117 |
| NmuCI | GTSAC | 1 cut(s) | 22 |
| PpuMI | RGGWCCY | 1 cut(s) | 56 |
| Psp124BI | GAGCTC | 1 cut(s) | 225 |
| Psp1406I | AACGTT | 1 cut(s) | 130 |
| Psp5II | RGGWCCY | 1 cut(s) | 56 |
| PspPI | GGNCC | 1 cut(s) | 56 |
| PspPPI | RGGWCCY | 1 cut(s) | 56 |
| RsaI | GTAC | 1 cut(s) | 413 |
| RsaNI | GTAC | 1 cut(s) | 412 |
| RseI | CAYNNNNRTG | 1 cut(s) | 291 |
| SacI | GAGCTC | 1 cut(s) | 225 |
| SaqAI | TTAA | 5 cut(s) | 41, 122, 384, 450, 456 |
| Sau3AI | GATC | 1 cut(s) | 415 |
| Sau96I | GGNCC | 1 cut(s) | 56 |
| SduI | GDGCHC | 1 cut(s) | 225 |
| SetI | ASST | 9 cut(s) | 61, 97, 133, 187, 225, 271, 328, 358, 393 |
| SfaNI | GCATC | 2 cut(s) | 200, 288 |
| SinI | GGWCC | 1 cut(s) | 56 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 291 |
| Sse9I | AATT | 6 cut(s) | 101, 123, 140, 226, 420, 440 |
| SsiI | CCGC | 3 cut(s) | 160, 213, 218 |
| SstI | GAGCTC | 1 cut(s) | 225 |
| StyI | CCWWGG | 1 cut(s) | 460 |
| TaaI | ACNGT | 2 cut(s) | 254, 301 |
| TaiI | ACGT | 1 cut(s) | 133 |
| TaqI | TCGA | 2 cut(s) | 7, 194 |
| TasI | AATT | 6 cut(s) | 101, 123, 140, 226, 420, 440 |
| Tru1I | TTAA | 5 cut(s) | 41, 122, 384, 450, 456 |
| Tru9I | TTAA | 5 cut(s) | 41, 122, 384, 450, 456 |
| TseFI | GTSAC | 1 cut(s) | 22 |
| Tsp45I | GTSAC | 1 cut(s) | 22 |
| TspDTI | ATGAA | 3 cut(s) | 170, 192, 324 |
| TspGWI | ACGGA | 3 cut(s) | 10, 70, 348 |
| VpaK11BI | GGWCC | 1 cut(s) | 56 |
| XapI | RAATTY | 2 cut(s) | 101, 440 |