protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ank_2 | PF12796 | 91 - 159 | 2.2e-07 | Ankyrin repeats (3 copies) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 161 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 293 |
| AciI | CCGC | 2 cut(s) | 422, 427 |
| AcsI | RAATTY | 1 cut(s) | 664 |
| AcuI | CTGAAG | 1 cut(s) | 161 |
| AdeI | CACNNNGTG | 1 cut(s) | 26 |
| AfaI | GTAC | 1 cut(s) | 525 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 136, 293, 617 |
| AgsI | TTSAA | 4 cut(s) | 41, 125, 202, 383 |
| AjnI | CCWGG | 2 cut(s) | 135, 462 |
| AluBI | AGCT | 4 cut(s) | 101, 185, 542, 602 |
| AluI | AGCT | 4 cut(s) | 101, 185, 542, 602 |
| Alw26I | GTCTC | 2 cut(s) | 325, 590 |
| AoxI | GGCC | 3 cut(s) | 408, 615, 620 |
| ApaI | GGGCCC | 1 cut(s) | 624 |
| ApeKI | GCWGC | 1 cut(s) | 552 |
| ApoI | RAATTY | 1 cut(s) | 664 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 450, 482 |
| AspLEI | GCGC | 1 cut(s) | 632 |
| AspS9I | GGNCC | 2 cut(s) | 620, 621 |
| AsuC2I | CCSGG | 1 cut(s) | 619 |
| AsuHPI | GGTGA | 1 cut(s) | 481 |
| BaeGI | GKGCMC | 1 cut(s) | 624 |
| BanI | GGYRCC | 1 cut(s) | 161 |
| BanII | GRGCYC | 1 cut(s) | 624 |
| BbsI | GAAGAC | 2 cut(s) | 299, 381 |
| BbvCI | CCTCAGC | 1 cut(s) | 102 |
| BbvI | GCAGC | 1 cut(s) | 564 |
| BccI | CCATC | 1 cut(s) | 506 |
| BceAI | ACGGC | 2 cut(s) | 175, 423 |
| BciT130I | CCWGG | 2 cut(s) | 137, 464 |
| BcnI | CCSGG | 1 cut(s) | 619 |
| BcoDI | GTCTC | 2 cut(s) | 325, 590 |
| BfaI | CTAG | 1 cut(s) | 396 |
| BfmI | CTRYAG | 2 cut(s) | 12, 300 |
| BfoI | RGCGCY | 1 cut(s) | 633 |
| BisI | GCNGC | 1 cut(s) | 553 |
| BlpI | GCTNAGC | 1 cut(s) | 538 |
| BlsI | GCNGC | 1 cut(s) | 554 |
| BmcAI | AGTACT | 1 cut(s) | 525 |
| Bme1390I | CCNGG | 3 cut(s) | 137, 464, 619 |
| BmgT120I | GGNCC | 2 cut(s) | 620, 621 |
| BmiI | GGNNCC | 2 cut(s) | 163, 622 |
| BmrFI | CCNGG | 3 cut(s) | 137, 464, 619 |
| BmrI | ACTGGG | 1 cut(s) | 524 |
| BmsI | GCATC | 1 cut(s) | 420 |
| BmuI | ACTGGG | 1 cut(s) | 524 |
| BpiI | GAAGAC | 2 cut(s) | 299, 381 |
| Bpu10I | CCTNAGC | 1 cut(s) | 102 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 538 |
| BpuMI | CCSGG | 1 cut(s) | 619 |
| BsaAI | YACGTR | 1 cut(s) | 313 |
| BsaJI | CCNNGG | 1 cut(s) | 462 |
| BsaWI | WCCGGW | 1 cut(s) | 595 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 136, 293, 617 |
| Bse1I | ACTGG | 2 cut(s) | 298, 530 |
| BseBI | CCWGG | 2 cut(s) | 137, 464 |
| BseDI | CCNNGG | 1 cut(s) | 462 |
| BseGI | GGATG | 3 cut(s) | 238, 259, 435 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 136, 293, 617 |
| BseMII | CTCAG | 2 cut(s) | 93, 552 |
| BseNI | ACTGG | 2 cut(s) | 298, 530 |
| BseSI | GKGCMC | 1 cut(s) | 624 |
| BseXI | GCAGC | 1 cut(s) | 564 |
| BsgI | GTGCAG | 1 cut(s) | 377 |
| BshFI | GGCC | 3 cut(s) | 410, 617, 622 |
| BshNI | GGYRCC | 1 cut(s) | 161 |
| BsiSI | CCGG | 2 cut(s) | 596, 618 |
| BslFI | GGGAC | 1 cut(s) | 344 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 136, 293, 617 |
| BsmAI | GTCTC | 2 cut(s) | 325, 590 |
| BsmBI | CGTCTC | 1 cut(s) | 590 |
| BsmFI | GGGAC | 1 cut(s) | 344 |
| BsnI | GGCC | 3 cut(s) | 410, 617, 622 |
| Bsp120I | GGGCCC | 1 cut(s) | 620 |
| Bsp1286I | GDGCHC | 1 cut(s) | 624 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 538 |
| BspACI | CCGC | 2 cut(s) | 422, 427 |
| BspANI | GGCC | 3 cut(s) | 410, 617, 622 |
| BspCNI | CTCAG | 2 cut(s) | 94, 551 |
| BspHI | TCATGA | 1 cut(s) | 657 |
| BspLI | GGNNCC | 2 cut(s) | 163, 622 |
| BspT107I | GGYRCC | 1 cut(s) | 161 |
| BsrI | ACTGG | 2 cut(s) | 298, 530 |
| BssECI | CCNNGG | 1 cut(s) | 462 |
| Bst2UI | CCWGG | 2 cut(s) | 137, 464 |
| Bst4CI | ACNGT | 2 cut(s) | 16, 257 |
| Bst6I | CTCTTC | 1 cut(s) | 180 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 26 |
| BstBAI | YACGTR | 1 cut(s) | 313 |
| BstDEI | CTNAG | 2 cut(s) | 102, 538 |
| BstF5I | GGATG | 3 cut(s) | 238, 259, 435 |
| BstH2I | RGCGCY | 1 cut(s) | 633 |
| BstHHI | GCGC | 1 cut(s) | 632 |
| BstMAI | GTCTC | 2 cut(s) | 325, 590 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 26, 191 |
| BstNI | CCWGG | 2 cut(s) | 137, 464 |
| BstSCI | CCNGG | 3 cut(s) | 135, 462, 617 |
| BstSFI | CTRYAG | 2 cut(s) | 12, 300 |
| BstSLI | GKGCMC | 1 cut(s) | 624 |
| BstV1I | GCAGC | 1 cut(s) | 564 |
| BstV2I | GAAGAC | 2 cut(s) | 299, 381 |
| BsuRI | GGCC | 3 cut(s) | 410, 617, 622 |
| BtsCI | GGATG | 3 cut(s) | 238, 259, 435 |
| CciI | TCATGA | 1 cut(s) | 657 |
| CfoI | GCGC | 1 cut(s) | 632 |
| Cfr13I | GGNCC | 2 cut(s) | 620, 621 |
| CseI | GACGC | 1 cut(s) | 341 |
| CsiI | ACCWGGT | 1 cut(s) | 135 |
| Csp6I | GTAC | 1 cut(s) | 524 |
| CviAII | CATG | 2 cut(s) | 149, 658 |
| CviQI | GTAC | 1 cut(s) | 524 |
| DdeI | CTNAG | 2 cut(s) | 102, 538 |
| DraIII | CACNNNGTG | 1 cut(s) | 26 |
| Eam1104I | CTCTTC | 1 cut(s) | 180 |
| EarI | CTCTTC | 1 cut(s) | 180 |
| Eco24I | GRGCYC | 1 cut(s) | 624 |
| Eco57I | CTGAAG | 1 cut(s) | 161 |
| EcoRII | CCWGG | 2 cut(s) | 135, 462 |
| EcoT22I | ATGCAT | 1 cut(s) | 484 |
| EcoT38I | GRGCYC | 1 cut(s) | 624 |
| Esp3I | CGTCTC | 1 cut(s) | 590 |
| FaeI | CATG | 2 cut(s) | 152, 661 |
| FaiI | YATR | 6 cut(s) | 53, 63, 150, 516, 659, 688 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 77, 109, 174, 206 |
| FaqI | GGGAC | 1 cut(s) | 344 |
| FatI | CATG | 2 cut(s) | 148, 657 |
| Fnu4HI | GCNGC | 1 cut(s) | 553 |
| FokI | GGATG | 3 cut(s) | 245, 246, 442 |
| FriOI | GRGCYC | 1 cut(s) | 624 |
| Fsp4HI | GCNGC | 1 cut(s) | 553 |
| FspBI | CTAG | 1 cut(s) | 396 |
| GlaI | GCGC | 1 cut(s) | 631 |
| GluI | GCNGC | 1 cut(s) | 553 |
| HaeII | RGCGCY | 1 cut(s) | 633 |
| HaeIII | GGCC | 3 cut(s) | 410, 617, 622 |
| HapII | CCGG | 2 cut(s) | 596, 618 |
| HgaI | GACGC | 1 cut(s) | 341 |
| HhaI | GCGC | 1 cut(s) | 632 |
| Hin1II | CATG | 2 cut(s) | 152, 661 |
| Hin6I | GCGC | 1 cut(s) | 630 |
| HinP1I | GCGC | 1 cut(s) | 630 |
| HindIII | AAGCTT | 1 cut(s) | 183 |
| HinfI | GANTC | 2 cut(s) | 73, 392 |
| HpaII | CCGG | 2 cut(s) | 596, 618 |
| HphI | GGTGA | 1 cut(s) | 481 |
| Hpy188III | TCNNGA | 4 cut(s) | 179, 202, 263, 658 |
| HpyAV | CCTTC | 2 cut(s) | 109, 343 |
| HpyCH4III | ACNGT | 2 cut(s) | 16, 257 |
| HpyCH4IV | ACGT | 2 cut(s) | 312, 508 |
| HpyCH4V | TGCA | 3 cut(s) | 20, 358, 482 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 26, 191 |
| HpyF3I | CTNAG | 2 cut(s) | 102, 538 |
| HpySE526I | ACGT | 2 cut(s) | 312, 508 |
| Hsp92II | CATG | 2 cut(s) | 152, 661 |
| HspAI | GCGC | 1 cut(s) | 630 |
| Lsp1109I | GCAGC | 1 cut(s) | 564 |
| LweI | GCATC | 1 cut(s) | 420 |
| MabI | ACCWGGT | 1 cut(s) | 135 |
| MaeI | CTAG | 1 cut(s) | 396 |
| MaeII | ACGT | 2 cut(s) | 312, 508 |
| MaeIII | GTNAC | 2 cut(s) | 169, 487 |
| MboII | GAAGA | 4 cut(s) | 167, 190, 299, 386 |
| MfeI | CAATTG | 1 cut(s) | 556 |
| MhlI | GDGCHC | 1 cut(s) | 624 |
| MluCI | AATT | 2 cut(s) | 556, 664 |
| MlyI | GAGTC | 2 cut(s) | 82, 386 |
| MnlI | CCTC | 4 cut(s) | 97, 138, 364, 607 |
| Mph1103I | ATGCAT | 1 cut(s) | 484 |
| MseI | TTAA | 1 cut(s) | 84 |
| MspA1I | CMGCKG | 1 cut(s) | 542 |
| MspI | CCGG | 2 cut(s) | 596, 618 |
| MspR9I | CCNGG | 3 cut(s) | 137, 464, 619 |
| MunI | CAATTG | 1 cut(s) | 556 |
| MvaI | CCWGG | 2 cut(s) | 137, 464 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 26, 191 |
| NciI | CCSGG | 1 cut(s) | 619 |
| NlaIII | CATG | 2 cut(s) | 152, 661 |
| NlaIV | GGNNCC | 2 cut(s) | 163, 622 |
| NmuCI | GTSAC | 2 cut(s) | 169, 487 |
| NsiI | ATGCAT | 1 cut(s) | 484 |
| PagI | TCATGA | 1 cut(s) | 657 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 293 |
| PkrI | GCNGC | 1 cut(s) | 554 |
| PleI | GAGTC | 2 cut(s) | 81, 386 |
| PpsI | GAGTC | 2 cut(s) | 81, 386 |
| Ppu21I | YACGTR | 1 cut(s) | 313 |
| Psp6I | CCWGG | 2 cut(s) | 135, 462 |
| PspGI | CCWGG | 2 cut(s) | 135, 462 |
| PspN4I | GGNNCC | 2 cut(s) | 163, 622 |
| PspOMI | GGGCCC | 1 cut(s) | 620 |
| PspPI | GGNCC | 2 cut(s) | 620, 621 |
| PvuII | CAGCTG | 1 cut(s) | 542 |
| RsaI | GTAC | 1 cut(s) | 525 |
| RsaNI | GTAC | 1 cut(s) | 524 |
| SaqAI | TTAA | 1 cut(s) | 84 |
| SatI | GCNGC | 1 cut(s) | 553 |
| Sau96I | GGNCC | 2 cut(s) | 620, 621 |
| ScaI | AGTACT | 1 cut(s) | 525 |
| SchI | GAGTC | 2 cut(s) | 82, 386 |
| ScrFI | CCNGG | 3 cut(s) | 137, 464, 619 |
| SduI | GDGCHC | 1 cut(s) | 624 |
| SexAI | ACCWGGT | 1 cut(s) | 135 |
| SfaNI | GCATC | 1 cut(s) | 420 |
| SfcI | CTRYAG | 2 cut(s) | 12, 300 |
| Sse9I | AATT | 2 cut(s) | 556, 664 |
| SsiI | CCGC | 2 cut(s) | 422, 427 |
| SspMI | CTAG | 1 cut(s) | 396 |
| StyD4I | CCNGG | 3 cut(s) | 135, 462, 617 |
| TaaI | ACNGT | 2 cut(s) | 16, 257 |
| TaiI | ACGT | 2 cut(s) | 315, 511 |
| TaqI | TCGA | 2 cut(s) | 447, 548 |
| TasI | AATT | 2 cut(s) | 556, 664 |
| TatI | WGTACW | 1 cut(s) | 523 |
| Tru1I | TTAA | 1 cut(s) | 84 |
| Tru9I | TTAA | 1 cut(s) | 84 |
| TseFI | GTSAC | 2 cut(s) | 169, 487 |
| TseI | GCWGC | 1 cut(s) | 552 |
| Tsp45I | GTSAC | 2 cut(s) | 169, 487 |
| TspDTI | ATGAA | 5 cut(s) | 249, 380, 519, 531, 674 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 293 |
| XapI | RAATTY | 1 cut(s) | 664 |
| XspI | CTAG | 1 cut(s) | 396 |
| ZrmI | AGTACT | 1 cut(s) | 525 |
| Zsp2I | ATGCAT | 1 cut(s) | 484 |