protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 155 |
| AccIII | TCCGGA | 1 cut(s) | 124 |
| AcoI | YGGCCR | 1 cut(s) | 85 |
| AcsI | RAATTY | 2 cut(s) | 31, 512 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 124, 155, 464 |
| AgsI | TTSAA | 4 cut(s) | 47, 185, 363, 446 |
| AluBI | AGCT | 5 cut(s) | 83, 167, 188, 275, 389 |
| AluI | AGCT | 5 cut(s) | 83, 167, 188, 275, 389 |
| Aor13HI | TCCGGA | 1 cut(s) | 124 |
| AoxI | GGCC | 1 cut(s) | 85 |
| ApeKI | GCWGC | 1 cut(s) | 287 |
| ApoI | RAATTY | 2 cut(s) | 31, 512 |
| AspLEI | GCGC | 1 cut(s) | 479 |
| AspS9I | GGNCC | 1 cut(s) | 467 |
| AvaII | GGWCC | 1 cut(s) | 467 |
| BbsI | GAAGAC | 1 cut(s) | 167 |
| BbvI | GCAGC | 1 cut(s) | 274 |
| BccI | CCATC | 2 cut(s) | 157, 220 |
| BceAI | ACGGC | 1 cut(s) | 72 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 398, 432 |
| BfoI | RGCGCY | 1 cut(s) | 480 |
| BisI | GCNGC | 1 cut(s) | 288 |
| BlsI | GCNGC | 1 cut(s) | 289 |
| Bme18I | GGWCC | 1 cut(s) | 467 |
| BmgT120I | GGNCC | 1 cut(s) | 467 |
| BpiI | GAAGAC | 1 cut(s) | 167 |
| BsaWI | WCCGGW | 1 cut(s) | 124 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 124, 155, 464 |
| Bse3DI | GCAATG | 1 cut(s) | 174 |
| BseAI | TCCGGA | 1 cut(s) | 124 |
| BseGI | GGATG | 3 cut(s) | 121, 145, 503 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 124, 155, 464 |
| BseMI | GCAATG | 1 cut(s) | 174 |
| BseXI | GCAGC | 1 cut(s) | 274 |
| BseYI | CCCAGC | 1 cut(s) | 188 |
| Bsh1285I | CGRYCG | 1 cut(s) | 268 |
| BshFI | GGCC | 1 cut(s) | 87 |
| BsiEI | CGRYCG | 1 cut(s) | 268 |
| BsiSI | CCGG | 1 cut(s) | 125 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 124, 155, 464 |
| BsmI | GAATGC | 1 cut(s) | 351 |
| BsnI | GGCC | 1 cut(s) | 87 |
| Bsp13I | TCCGGA | 1 cut(s) | 124 |
| BspANI | GGCC | 1 cut(s) | 87 |
| BspEI | TCCGGA | 1 cut(s) | 124 |
| BspQI | GCTCTTC | 1 cut(s) | 174 |
| BsrDI | GCAATG | 1 cut(s) | 174 |
| Bst4CI | ACNGT | 1 cut(s) | 266 |
| Bst6I | CTCTTC | 2 cut(s) | 174, 225 |
| BstC8I | GCNNGC | 2 cut(s) | 81, 85 |
| BstF5I | GGATG | 3 cut(s) | 121, 145, 503 |
| BstH2I | RGCGCY | 1 cut(s) | 480 |
| BstHHI | GCGC | 1 cut(s) | 479 |
| BstMCI | CGRYCG | 1 cut(s) | 268 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 80, 185, 287 |
| BstNSI | RCATGY | 1 cut(s) | 197 |
| BstV1I | GCAGC | 1 cut(s) | 274 |
| BstV2I | GAAGAC | 1 cut(s) | 167 |
| BsuRI | GGCC | 1 cut(s) | 87 |
| BtsCI | GGATG | 3 cut(s) | 121, 145, 503 |
| BtsIMutI | CAGTG | 1 cut(s) | 59 |
| Cac8I | GCNNGC | 2 cut(s) | 81, 85 |
| CfoI | GCGC | 1 cut(s) | 479 |
| Cfr13I | GGNCC | 1 cut(s) | 467 |
| CviAII | CATG | 3 cut(s) | 194, 322, 473 |
| CviJI | RGCY | 9 cut(s) | 74, 83, 87, 167, 188, 275, 314, 389, 416 |
| CviKI_1 | RGCY | 9 cut(s) | 74, 83, 87, 167, 188, 275, 314, 389, 416 |
| EaeI | YGGCCR | 1 cut(s) | 85 |
| Eam1104I | CTCTTC | 2 cut(s) | 174, 225 |
| EarI | CTCTTC | 2 cut(s) | 174, 225 |
| Eco32I | GATATC | 1 cut(s) | 422 |
| Eco47I | GGWCC | 1 cut(s) | 467 |
| EcoO109I | RGGNCCY | 1 cut(s) | 467 |
| EcoRV | GATATC | 1 cut(s) | 422 |
| EcoT22I | ATGCAT | 1 cut(s) | 323 |
| FaeI | CATG | 3 cut(s) | 197, 325, 476 |
| FaiI | YATR | 5 cut(s) | 195, 323, 411, 413, 474 |
| FatI | CATG | 3 cut(s) | 193, 321, 472 |
| FauNDI | CATATG | 1 cut(s) | 411 |
| Fnu4HI | GCNGC | 1 cut(s) | 288 |
| FokI | GGATG | 3 cut(s) | 108, 132, 490 |
| Fsp4HI | GCNGC | 1 cut(s) | 288 |
| GlaI | GCGC | 1 cut(s) | 478 |
| GluI | GCNGC | 1 cut(s) | 288 |
| GsaI | CCCAGC | 1 cut(s) | 192 |
| HaeII | RGCGCY | 1 cut(s) | 480 |
| HaeIII | GGCC | 1 cut(s) | 87 |
| HapII | CCGG | 1 cut(s) | 125 |
| HhaI | GCGC | 1 cut(s) | 479 |
| Hin1II | CATG | 3 cut(s) | 197, 325, 476 |
| Hin6I | GCGC | 1 cut(s) | 477 |
| HinP1I | GCGC | 1 cut(s) | 477 |
| HinfI | GANTC | 1 cut(s) | 359 |
| HpaII | CCGG | 1 cut(s) | 125 |
| Hpy166II | GTNNAC | 1 cut(s) | 59 |
| Hpy188I | TCNGA | 1 cut(s) | 270 |
| Hpy188III | TCNNGA | 2 cut(s) | 125, 356 |
| Hpy8I | GTNNAC | 1 cut(s) | 59 |
| HpyCH4III | ACNGT | 1 cut(s) | 266 |
| HpyCH4V | TGCA | 5 cut(s) | 79, 101, 179, 290, 321 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 80, 185, 287 |
| Hsp92II | CATG | 3 cut(s) | 197, 325, 476 |
| HspAI | GCGC | 1 cut(s) | 477 |
| Kpn2I | TCCGGA | 1 cut(s) | 124 |
| LguI | GCTCTTC | 1 cut(s) | 174 |
| LpnPI | CCDG | 7 cut(s) | 24, 69, 138, 141, 174, 245, 471 |
| Lsp1109I | GCAGC | 1 cut(s) | 274 |
| MaeIII | GTNAC | 2 cut(s) | 325, 433 |
| MboII | GAAGA | 5 cut(s) | 144, 161, 172, 242, 458 |
| MfeI | CAATTG | 2 cut(s) | 378, 493 |
| MluCI | AATT | 8 cut(s) | 8, 31, 212, 291, 341, 378, 493, 512 |
| MmeI | TCCRAC | 2 cut(s) | 142, 248 |
| MnlI | CCTC | 4 cut(s) | 64, 121, 226, 480 |
| Mph1103I | ATGCAT | 1 cut(s) | 323 |
| MroI | TCCGGA | 1 cut(s) | 124 |
| MseI | TTAA | 4 cut(s) | 11, 294, 452, 529 |
| MspI | CCGG | 1 cut(s) | 125 |
| MunI | CAATTG | 2 cut(s) | 378, 493 |
| Mva1269I | GAATGC | 1 cut(s) | 351 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 80, 185, 287 |
| NdeI | CATATG | 1 cut(s) | 411 |
| NlaIII | CATG | 3 cut(s) | 197, 325, 476 |
| NmeAIII | GCCGAG | 1 cut(s) | 327 |
| NmuCI | GTSAC | 1 cut(s) | 433 |
| NsiI | ATGCAT | 1 cut(s) | 323 |
| NspI | RCATGY | 1 cut(s) | 197 |
| PciSI | GCTCTTC | 1 cut(s) | 174 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 354 |
| PctI | GAATGC | 1 cut(s) | 351 |
| PfeI | GAWTC | 1 cut(s) | 359 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 155 |
| PkrI | GCNGC | 1 cut(s) | 289 |
| PpuMI | RGGWCCY | 1 cut(s) | 467 |
| Psp5II | RGGWCCY | 1 cut(s) | 467 |
| PspFI | CCCAGC | 1 cut(s) | 188 |
| PspPI | GGNCC | 1 cut(s) | 467 |
| PspPPI | RGGWCCY | 1 cut(s) | 467 |
| SapI | GCTCTTC | 1 cut(s) | 174 |
| SaqAI | TTAA | 4 cut(s) | 11, 294, 452, 529 |
| SatI | GCNGC | 1 cut(s) | 288 |
| Sau96I | GGNCC | 1 cut(s) | 467 |
| SetI | ASST | 7 cut(s) | 64, 85, 169, 190, 277, 391, 472 |
| SinI | GGWCC | 1 cut(s) | 467 |
| Sse9I | AATT | 8 cut(s) | 8, 31, 212, 291, 341, 378, 493, 512 |
| TaaI | ACNGT | 1 cut(s) | 266 |
| TaqI | TCGA | 1 cut(s) | 418 |
| TasI | AATT | 8 cut(s) | 8, 31, 212, 291, 341, 378, 493, 512 |
| TfiI | GAWTC | 1 cut(s) | 359 |
| Tru1I | TTAA | 4 cut(s) | 11, 294, 452, 529 |
| Tru9I | TTAA | 4 cut(s) | 11, 294, 452, 529 |
| TscAI | CASTG | 1 cut(s) | 59 |
| TseFI | GTSAC | 1 cut(s) | 433 |
| TseI | GCWGC | 1 cut(s) | 287 |
| Tsp45I | GTSAC | 1 cut(s) | 433 |
| TspGWI | ACGGA | 1 cut(s) | 421 |
| TspRI | CASTG | 1 cut(s) | 59 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 155 |
| VpaK11BI | GGWCC | 1 cut(s) | 467 |
| XapI | RAATTY | 2 cut(s) | 31, 512 |
| XceI | RCATGY | 1 cut(s) | 197 |
| Zsp2I | ATGCAT | 1 cut(s) | 323 |