protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 197 - 307 | 1.9e-23 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1030 |
| Acc65I | GGTACC | 1 cut(s) | 484 |
| AccB1I | GGYRCC | 1 cut(s) | 484 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 121 |
| AccI | GTMKAC | 2 cut(s) | 31, 1034 |
| AccII | CGCG | 1 cut(s) | 805 |
| AciI | CCGC | 2 cut(s) | 283, 533 |
| AclWI | GGATC | 1 cut(s) | 953 |
| AcsI | RAATTY | 4 cut(s) | 18, 234, 294, 358 |
| AfaI | GTAC | 2 cut(s) | 486, 613 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 121 |
| AflII | CTTAAG | 1 cut(s) | 23 |
| AgsI | TTSAA | 3 cut(s) | 233, 425, 458 |
| AjiI | CACGTC | 1 cut(s) | 801 |
| AjnI | CCWGG | 2 cut(s) | 667, 1045 |
| AluBI | AGCT | 4 cut(s) | 119, 167, 412, 878 |
| AluI | AGCT | 4 cut(s) | 119, 167, 412, 878 |
| Alw26I | GTCTC | 3 cut(s) | 227, 320, 1016 |
| AlwI | GGATC | 1 cut(s) | 953 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 668 |
| Ama87I | CYCGRG | 1 cut(s) | 317 |
| AoxI | GGCC | 3 cut(s) | 112, 253, 856 |
| ApeKI | GCWGC | 3 cut(s) | 164, 623, 884 |
| ApoI | RAATTY | 4 cut(s) | 18, 234, 294, 358 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 358, 719 |
| Asp718I | GGTACC | 1 cut(s) | 484 |
| AspS9I | GGNCC | 3 cut(s) | 112, 254, 1043 |
| AsuHPI | GGTGA | 3 cut(s) | 548, 695, 856 |
| AvaI | CYCGRG | 1 cut(s) | 317 |
| AvaII | GGWCC | 1 cut(s) | 1043 |
| BaeGI | GKGCMC | 1 cut(s) | 913 |
| BanI | GGYRCC | 1 cut(s) | 484 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 472, 504 |
| BbvI | GCAGC | 3 cut(s) | 176, 610, 871 |
| BccI | CCATC | 4 cut(s) | 103, 281, 562, 886 |
| BceAI | ACGGC | 1 cut(s) | 615 |
| BciT130I | CCWGG | 2 cut(s) | 669, 1047 |
| BcoDI | GTCTC | 3 cut(s) | 227, 320, 1016 |
| BfaI | CTAG | 2 cut(s) | 875, 906 |
| BfmI | CTRYAG | 1 cut(s) | 651 |
| BfrI | CTTAAG | 1 cut(s) | 23 |
| BisI | GCNGC | 4 cut(s) | 165, 283, 624, 885 |
| BlsI | GCNGC | 4 cut(s) | 166, 284, 625, 886 |
| Bme1390I | CCNGG | 2 cut(s) | 669, 1047 |
| Bme18I | GGWCC | 1 cut(s) | 1043 |
| BmeT110I | CYCGRG | 1 cut(s) | 317 |
| BmgBI | CACGTC | 1 cut(s) | 801 |
| BmgT120I | GGNCC | 3 cut(s) | 112, 254, 1043 |
| BmiI | GGNNCC | 2 cut(s) | 256, 486 |
| BmrFI | CCNGG | 2 cut(s) | 669, 1047 |
| BmsI | GCATC | 2 cut(s) | 486, 990 |
| BsaI | GGTCTC | 1 cut(s) | 320 |
| BsaJI | CCNNGG | 1 cut(s) | 1073 |
| BsaWI | WCCGGW | 1 cut(s) | 697 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 501, 531 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 121 |
| Bse1I | ACTGG | 1 cut(s) | 980 |
| BseBI | CCWGG | 2 cut(s) | 669, 1047 |
| BseDI | CCNNGG | 1 cut(s) | 1073 |
| BseGI | GGATG | 2 cut(s) | 114, 1005 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 121 |
| BseMII | CTCAG | 1 cut(s) | 483 |
| BseNI | ACTGG | 1 cut(s) | 980 |
| BseRI | GAGGAG | 2 cut(s) | 587, 1004 |
| BseSI | GKGCMC | 1 cut(s) | 913 |
| BseXI | GCAGC | 3 cut(s) | 176, 610, 871 |
| Bsh1236I | CGCG | 1 cut(s) | 805 |
| BshFI | GGCC | 3 cut(s) | 114, 255, 858 |
| BshNI | GGYRCC | 1 cut(s) | 484 |
| BsiHKCI | CYCGRG | 1 cut(s) | 317 |
| BsiSI | CCGG | 1 cut(s) | 698 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 121 |
| BsmAI | GTCTC | 3 cut(s) | 227, 320, 1016 |
| BsmBI | CGTCTC | 1 cut(s) | 227 |
| BsmI | GAATGC | 3 cut(s) | 284, 656, 693 |
| BsnI | GGCC | 3 cut(s) | 114, 255, 858 |
| Bso31I | GGTCTC | 1 cut(s) | 320 |
| BsoBI | CYCGRG | 1 cut(s) | 317 |
| Bsp1286I | GDGCHC | 1 cut(s) | 913 |
| Bsp1407I | TGTACA | 1 cut(s) | 611 |
| Bsp143I | GATC | 1 cut(s) | 945 |
| BspACI | CCGC | 2 cut(s) | 283, 533 |
| BspANI | GGCC | 3 cut(s) | 114, 255, 858 |
| BspCNI | CTCAG | 1 cut(s) | 484 |
| BspFNI | CGCG | 1 cut(s) | 805 |
| BspLI | GGNNCC | 2 cut(s) | 256, 486 |
| BspPI | GGATC | 1 cut(s) | 953 |
| BspT107I | GGYRCC | 1 cut(s) | 484 |
| BspTI | CTTAAG | 1 cut(s) | 23 |
| BspTNI | GGTCTC | 1 cut(s) | 320 |
| BsrGI | TGTACA | 1 cut(s) | 611 |
| BsrI | ACTGG | 1 cut(s) | 980 |
| BssECI | CCNNGG | 1 cut(s) | 1073 |
| BssMI | GATC | 1 cut(s) | 945 |
| BssT1I | CCWWGG | 1 cut(s) | 1073 |
| Bst2UI | CCWGG | 2 cut(s) | 669, 1047 |
| Bst4CI | ACNGT | 3 cut(s) | 58, 616, 664 |
| BstAFI | CTTAAG | 1 cut(s) | 23 |
| BstAUI | TGTACA | 1 cut(s) | 611 |
| BstC8I | GCNNGC | 1 cut(s) | 531 |
| BstDEI | CTNAG | 1 cut(s) | 492 |
| BstF5I | GGATG | 2 cut(s) | 114, 1005 |
| BstFNI | CGCG | 1 cut(s) | 805 |
| BstKTI | GATC | 1 cut(s) | 948 |
| BstMAI | GTCTC | 3 cut(s) | 227, 320, 1016 |
| BstMBI | GATC | 1 cut(s) | 945 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 884 |
| BstNI | CCWGG | 2 cut(s) | 669, 1047 |
| BstNSI | RCATGY | 2 cut(s) | 185, 390 |
| BstSCI | CCNGG | 2 cut(s) | 667, 1045 |
| BstSFI | CTRYAG | 1 cut(s) | 651 |
| BstSLI | GKGCMC | 1 cut(s) | 913 |
| BstUI | CGCG | 1 cut(s) | 805 |
| BstV1I | GCAGC | 3 cut(s) | 176, 610, 871 |
| BsuRI | GGCC | 3 cut(s) | 114, 255, 858 |
| BtrI | CACGTC | 1 cut(s) | 801 |
| BtsCI | GGATG | 2 cut(s) | 114, 1005 |
| BtsIMutI | CAGTG | 1 cut(s) | 987 |
| Cac8I | GCNNGC | 1 cut(s) | 531 |
| CaiI | CAGNNNCTG | 1 cut(s) | 668 |
| Cfr13I | GGNCC | 3 cut(s) | 112, 254, 1043 |
| Csp6I | GTAC | 2 cut(s) | 485, 612 |
| CviAII | CATG | 9 cut(s) | 182, 373, 387, 500, 643, 724, 929, 942, 1030 |
| CviJI | RGCY | 9 cut(s) | 114, 119, 167, 255, 340, 412, 858, 878, 1078 |
| CviKI_1 | RGCY | 9 cut(s) | 114, 119, 167, 255, 340, 412, 858, 878, 1078 |
| CviQI | GTAC | 2 cut(s) | 485, 612 |
| DdeI | CTNAG | 1 cut(s) | 492 |
| DpnI | GATC | 1 cut(s) | 947 |
| DpnII | GATC | 1 cut(s) | 945 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1030 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1030 |
| Eco130I | CCWWGG | 1 cut(s) | 1073 |
| Eco147I | AGGCCT | 1 cut(s) | 858 |
| Eco31I | GGTCTC | 1 cut(s) | 320 |
| Eco47I | GGWCC | 1 cut(s) | 1043 |
| Eco88I | CYCGRG | 1 cut(s) | 317 |
| EcoO109I | RGGNCCY | 1 cut(s) | 254 |
| EcoRI | GAATTC | 2 cut(s) | 18, 358 |
| EcoRII | CCWGG | 2 cut(s) | 667, 1045 |
| EcoT14I | CCWWGG | 1 cut(s) | 1073 |
| EcoT22I | ATGCAT | 1 cut(s) | 501 |
| ErhI | CCWWGG | 1 cut(s) | 1073 |
| Esp3I | CGTCTC | 1 cut(s) | 227 |
| FaeI | CATG | 9 cut(s) | 185, 376, 390, 503, 646, 727, 932, 945, 1033 |
| FatI | CATG | 9 cut(s) | 181, 372, 386, 499, 642, 723, 928, 941, 1029 |
| FauI | CCCGC | 1 cut(s) | 526 |
| FauNDI | CATATG | 1 cut(s) | 201 |
| FblI | GTMKAC | 2 cut(s) | 31, 1034 |
| Fnu4HI | GCNGC | 4 cut(s) | 165, 283, 624, 885 |
| FokI | GGATG | 2 cut(s) | 121, 1012 |
| Fsp4HI | GCNGC | 4 cut(s) | 165, 283, 624, 885 |
| FspBI | CTAG | 2 cut(s) | 875, 906 |
| GluI | GCNGC | 4 cut(s) | 165, 283, 624, 885 |
| HaeIII | GGCC | 3 cut(s) | 114, 255, 858 |
| HapII | CCGG | 1 cut(s) | 698 |
| Hin1II | CATG | 9 cut(s) | 185, 376, 390, 503, 646, 727, 932, 945, 1033 |
| HinfI | GANTC | 3 cut(s) | 48, 743, 792 |
| HpaII | CCGG | 1 cut(s) | 698 |
| HphI | GGTGA | 3 cut(s) | 548, 695, 856 |
| Hpy166II | GTNNAC | 4 cut(s) | 32, 214, 539, 1035 |
| Hpy188I | TCNGA | 2 cut(s) | 493, 742 |
| Hpy188III | TCNNGA | 3 cut(s) | 317, 319, 1021 |
| Hpy8I | GTNNAC | 4 cut(s) | 32, 214, 539, 1035 |
| Hpy99I | CGWCG | 1 cut(s) | 805 |
| HpyAV | CCTTC | 1 cut(s) | 498 |
| HpyCH4III | ACNGT | 3 cut(s) | 58, 616, 664 |
| HpyCH4IV | ACGT | 2 cut(s) | 220, 800 |
| HpyCH4V | TGCA | 8 cut(s) | 386, 431, 439, 445, 499, 812, 971, 1003 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 884 |
| HpyF3I | CTNAG | 1 cut(s) | 492 |
| HpySE526I | ACGT | 2 cut(s) | 220, 800 |
| Hsp92II | CATG | 9 cut(s) | 185, 376, 390, 503, 646, 727, 932, 945, 1033 |
| KpnI | GGTACC | 1 cut(s) | 488 |
| Kzo9I | GATC | 1 cut(s) | 945 |
| LpnPI | CCDG | 8 cut(s) | 543, 654, 675, 681, 711, 993, 1032, 1059 |
| Lsp1109I | GCAGC | 3 cut(s) | 176, 610, 871 |
| LweI | GCATC | 2 cut(s) | 486, 990 |
| MaeI | CTAG | 2 cut(s) | 875, 906 |
| MaeII | ACGT | 2 cut(s) | 220, 800 |
| MaeIII | GTNAC | 3 cut(s) | 634, 683, 895 |
| MalI | GATC | 1 cut(s) | 947 |
| MboI | GATC | 1 cut(s) | 945 |
| MboII | GAAGA | 2 cut(s) | 27, 753 |
| MhlI | GDGCHC | 1 cut(s) | 913 |
| MluCI | AATT | 7 cut(s) | 18, 234, 294, 358, 392, 523, 777 |
| MnlI | CCTC | 7 cut(s) | 344, 565, 568, 806, 997, 1020, 1025 |
| Mph1103I | ATGCAT | 1 cut(s) | 501 |
| MroXI | GAANNNNTTC | 2 cut(s) | 358, 719 |
| MseI | TTAA | 5 cut(s) | 24, 75, 93, 147, 465 |
| MslI | CAYNNNNRTG | 3 cut(s) | 204, 641, 698 |
| MspA1I | CMGCKG | 1 cut(s) | 533 |
| MspCI | CTTAAG | 1 cut(s) | 23 |
| MspI | CCGG | 1 cut(s) | 698 |
| MspR9I | CCNGG | 2 cut(s) | 669, 1047 |
| Mva1269I | GAATGC | 3 cut(s) | 284, 656, 693 |
| MvaI | CCWGG | 2 cut(s) | 669, 1047 |
| MvnI | CGCG | 1 cut(s) | 805 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 884 |
| NdeI | CATATG | 1 cut(s) | 201 |
| NdeII | GATC | 1 cut(s) | 945 |
| NlaIII | CATG | 9 cut(s) | 185, 376, 390, 503, 646, 727, 932, 945, 1033 |
| NlaIV | GGNNCC | 2 cut(s) | 256, 486 |
| NmuCI | GTSAC | 3 cut(s) | 634, 683, 895 |
| NsiI | ATGCAT | 1 cut(s) | 501 |
| NspI | RCATGY | 2 cut(s) | 185, 390 |
| PaeR7I | CTCGAG | 1 cut(s) | 317 |
| PceI | AGGCCT | 1 cut(s) | 858 |
| PctI | GAATGC | 3 cut(s) | 284, 656, 693 |
| PdmI | GAANNNNTTC | 2 cut(s) | 358, 719 |
| PfeI | GAWTC | 3 cut(s) | 48, 743, 792 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 121 |
| PkrI | GCNGC | 4 cut(s) | 166, 284, 625, 886 |
| Psp6I | CCWGG | 2 cut(s) | 667, 1045 |
| PspGI | CCWGG | 2 cut(s) | 667, 1045 |
| PspN4I | GGNNCC | 2 cut(s) | 256, 486 |
| PspPI | GGNCC | 3 cut(s) | 112, 254, 1043 |
| PstNI | CAGNNNCTG | 1 cut(s) | 668 |
| RsaI | GTAC | 2 cut(s) | 486, 613 |
| RsaNI | GTAC | 2 cut(s) | 485, 612 |
| RseI | CAYNNNNRTG | 3 cut(s) | 204, 641, 698 |
| SaqAI | TTAA | 5 cut(s) | 24, 75, 93, 147, 465 |
| SatI | GCNGC | 4 cut(s) | 165, 283, 624, 885 |
| Sau3AI | GATC | 1 cut(s) | 945 |
| Sau96I | GGNCC | 3 cut(s) | 112, 254, 1043 |
| ScrFI | CCNGG | 2 cut(s) | 669, 1047 |
| SduI | GDGCHC | 1 cut(s) | 913 |
| SetI | ASST | 9 cut(s) | 121, 169, 223, 414, 430, 490, 803, 880, 1075 |
| SfaNI | GCATC | 2 cut(s) | 486, 990 |
| SfcI | CTRYAG | 1 cut(s) | 651 |
| Sfr274I | CTCGAG | 1 cut(s) | 317 |
| SinI | GGWCC | 1 cut(s) | 1043 |
| SlaI | CTCGAG | 1 cut(s) | 317 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 204, 641, 698 |
| SmlI | CTYRAG | 2 cut(s) | 23, 317 |
| SmoI | CTYRAG | 2 cut(s) | 23, 317 |
| Sse9I | AATT | 7 cut(s) | 18, 234, 294, 358, 392, 523, 777 |
| SseBI | AGGCCT | 1 cut(s) | 858 |
| SsiI | CCGC | 2 cut(s) | 283, 533 |
| SspI | AATATT | 2 cut(s) | 938, 1053 |
| SspMI | CTAG | 2 cut(s) | 875, 906 |
| StuI | AGGCCT | 1 cut(s) | 858 |
| StyD4I | CCNGG | 2 cut(s) | 667, 1045 |
| StyI | CCWWGG | 1 cut(s) | 1073 |
| TaaI | ACNGT | 3 cut(s) | 58, 616, 664 |
| TaiI | ACGT | 2 cut(s) | 223, 803 |
| TaqI | TCGA | 3 cut(s) | 276, 318, 1020 |
| TasI | AATT | 7 cut(s) | 18, 234, 294, 358, 392, 523, 777 |
| TatI | WGTACW | 1 cut(s) | 611 |
| TauI | GCSGC | 1 cut(s) | 285 |
| TfiI | GAWTC | 3 cut(s) | 48, 743, 792 |
| Tru1I | TTAA | 5 cut(s) | 24, 75, 93, 147, 465 |
| Tru9I | TTAA | 5 cut(s) | 24, 75, 93, 147, 465 |
| TscAI | CASTG | 1 cut(s) | 987 |
| TseFI | GTSAC | 3 cut(s) | 634, 683, 895 |
| TseI | GCWGC | 3 cut(s) | 164, 623, 884 |
| Tsp45I | GTSAC | 3 cut(s) | 634, 683, 895 |
| TspDTI | ATGAA | 9 cut(s) | 78, 83, 258, 605, 694, 712, 917, 930, 1018 |
| TspRI | CASTG | 1 cut(s) | 987 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 121 |
| Vha464I | CTTAAG | 1 cut(s) | 23 |
| VpaK11BI | GGWCC | 1 cut(s) | 1043 |
| XapI | RAATTY | 4 cut(s) | 18, 234, 294, 358 |
| XceI | RCATGY | 2 cut(s) | 185, 390 |
| XhoI | CTCGAG | 1 cut(s) | 317 |
| XmiI | GTMKAC | 2 cut(s) | 31, 1034 |
| XmnI | GAANNNNTTC | 2 cut(s) | 358, 719 |
| XspI | CTAG | 2 cut(s) | 875, 906 |
| Zsp2I | ATGCAT | 1 cut(s) | 501 |