protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 172 - 283 | 8.7e-23 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 665 |
| AccII | CGCG | 1 cut(s) | 736 |
| AciI | CCGC | 2 cut(s) | 323, 816 |
| AcsI | RAATTY | 2 cut(s) | 29, 231 |
| AcuI | CTGAAG | 2 cut(s) | 278, 687 |
| AfeI | AGCGCT | 1 cut(s) | 366 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 112 |
| AgsI | TTSAA | 2 cut(s) | 238, 397 |
| AjnI | CCWGG | 3 cut(s) | 160, 598, 967 |
| AluBI | AGCT | 2 cut(s) | 110, 464 |
| AluI | AGCT | 2 cut(s) | 110, 464 |
| Ama87I | CYCGRG | 2 cut(s) | 24, 465 |
| Aor51HI | AGCGCT | 1 cut(s) | 366 |
| AoxI | GGCC | 2 cut(s) | 426, 787 |
| ApeKI | GCWGC | 2 cut(s) | 362, 367 |
| ApoI | RAATTY | 2 cut(s) | 29, 231 |
| AspLEI | GCGC | 1 cut(s) | 367 |
| AspS9I | GGNCC | 2 cut(s) | 10, 965 |
| AsuHPI | GGTGA | 4 cut(s) | 59, 511, 521, 787 |
| AsuII | TTCGAA | 1 cut(s) | 19 |
| AvaI | CYCGRG | 2 cut(s) | 24, 465 |
| AvaII | GGWCC | 2 cut(s) | 10, 965 |
| BbvI | GCAGC | 2 cut(s) | 354, 374 |
| BccI | CCATC | 2 cut(s) | 21, 173 |
| BceAI | ACGGC | 1 cut(s) | 194 |
| BciT130I | CCWGG | 3 cut(s) | 162, 600, 969 |
| BfmI | CTRYAG | 1 cut(s) | 582 |
| BfoI | RGCGCY | 1 cut(s) | 368 |
| BisI | GCNGC | 4 cut(s) | 324, 363, 368, 816 |
| BlsI | GCNGC | 4 cut(s) | 325, 364, 369, 817 |
| Bme1390I | CCNGG | 3 cut(s) | 162, 600, 969 |
| Bme18I | GGWCC | 2 cut(s) | 10, 965 |
| BmeT110I | CYCGRG | 2 cut(s) | 24, 465 |
| BmgT120I | GGNCC | 2 cut(s) | 10, 965 |
| BmrFI | CCNGG | 3 cut(s) | 162, 600, 969 |
| BmsI | GCATC | 2 cut(s) | 243, 912 |
| BpmI | CTGGAG | 1 cut(s) | 621 |
| Bpu14I | TTCGAA | 1 cut(s) | 19 |
| BpuEI | CTTGAG | 1 cut(s) | 597 |
| BsaJI | CCNNGG | 1 cut(s) | 210 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 112 |
| BseBI | CCWGG | 3 cut(s) | 162, 600, 969 |
| BseDI | CCNNGG | 1 cut(s) | 210 |
| BseGI | GGATG | 2 cut(s) | 258, 927 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 112 |
| BseMII | CTCAG | 1 cut(s) | 262 |
| BseXI | GCAGC | 2 cut(s) | 354, 374 |
| BsgI | GTGCAG | 1 cut(s) | 381 |
| Bsh1236I | CGCG | 1 cut(s) | 736 |
| BshFI | GGCC | 2 cut(s) | 428, 789 |
| BsiHKCI | CYCGRG | 2 cut(s) | 24, 465 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 112 |
| BsmI | GAATGC | 2 cut(s) | 411, 729 |
| BsnI | GGCC | 2 cut(s) | 428, 789 |
| BsoBI | CYCGRG | 2 cut(s) | 24, 465 |
| Bsp119I | TTCGAA | 1 cut(s) | 19 |
| Bsp143I | GATC | 1 cut(s) | 451 |
| BspACI | CCGC | 2 cut(s) | 323, 816 |
| BspANI | GGCC | 2 cut(s) | 428, 789 |
| BspCNI | CTCAG | 1 cut(s) | 261 |
| BspFNI | CGCG | 1 cut(s) | 736 |
| BspT104I | TTCGAA | 1 cut(s) | 19 |
| BssECI | CCNNGG | 1 cut(s) | 210 |
| BssMI | GATC | 1 cut(s) | 451 |
| Bst2UI | CCWGG | 3 cut(s) | 162, 600, 969 |
| Bst4CI | ACNGT | 2 cut(s) | 196, 547 |
| Bst6I | CTCTTC | 2 cut(s) | 841, 903 |
| BstBI | TTCGAA | 1 cut(s) | 19 |
| BstDEI | CTNAG | 2 cut(s) | 248, 718 |
| BstDSI | CCRYGG | 1 cut(s) | 210 |
| BstF5I | GGATG | 2 cut(s) | 258, 927 |
| BstFNI | CGCG | 1 cut(s) | 736 |
| BstH2I | RGCGCY | 1 cut(s) | 368 |
| BstHHI | GCGC | 1 cut(s) | 367 |
| BstKTI | GATC | 1 cut(s) | 454 |
| BstMBI | GATC | 1 cut(s) | 451 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 373, 733 |
| BstNI | CCWGG | 3 cut(s) | 162, 600, 969 |
| BstNSI | RCATGY | 1 cut(s) | 951 |
| BstSCI | CCNGG | 3 cut(s) | 160, 598, 967 |
| BstSFI | CTRYAG | 1 cut(s) | 582 |
| BstUI | CGCG | 1 cut(s) | 736 |
| BstV1I | GCAGC | 2 cut(s) | 354, 374 |
| BsuRI | GGCC | 2 cut(s) | 428, 789 |
| BtgI | CCRYGG | 1 cut(s) | 210 |
| BtgZI | GCGATG | 1 cut(s) | 717 |
| BtsCI | GGATG | 2 cut(s) | 258, 927 |
| BtsIMutI | CAGTG | 1 cut(s) | 201 |
| CfoI | GCGC | 1 cut(s) | 367 |
| Cfr13I | GGNCC | 2 cut(s) | 10, 965 |
| CviAII | CATG | 6 cut(s) | 43, 424, 457, 655, 864, 948 |
| CviJI | RGCY | 5 cut(s) | 110, 428, 464, 624, 789 |
| CviKI_1 | RGCY | 5 cut(s) | 110, 428, 464, 624, 789 |
| DdeI | CTNAG | 2 cut(s) | 248, 718 |
| DpnI | GATC | 1 cut(s) | 453 |
| DpnII | GATC | 1 cut(s) | 451 |
| Eam1104I | CTCTTC | 2 cut(s) | 841, 903 |
| EarI | CTCTTC | 2 cut(s) | 841, 903 |
| Eco47I | GGWCC | 2 cut(s) | 10, 965 |
| Eco47III | AGCGCT | 1 cut(s) | 366 |
| Eco57I | CTGAAG | 2 cut(s) | 278, 687 |
| Eco88I | CYCGRG | 2 cut(s) | 24, 465 |
| EcoRII | CCWGG | 3 cut(s) | 160, 598, 967 |
| EcoT22I | ATGCAT | 1 cut(s) | 953 |
| FaeI | CATG | 6 cut(s) | 46, 427, 460, 658, 867, 951 |
| FatI | CATG | 6 cut(s) | 42, 423, 456, 654, 863, 947 |
| FauNDI | CATATG | 2 cut(s) | 61, 205 |
| Fnu4HI | GCNGC | 4 cut(s) | 324, 363, 368, 816 |
| FokI | GGATG | 2 cut(s) | 265, 934 |
| Fsp4HI | GCNGC | 4 cut(s) | 324, 363, 368, 816 |
| GlaI | GCGC | 1 cut(s) | 366 |
| GluI | GCNGC | 4 cut(s) | 324, 363, 368, 816 |
| GsuI | CTGGAG | 1 cut(s) | 621 |
| HaeII | RGCGCY | 1 cut(s) | 368 |
| HaeIII | GGCC | 2 cut(s) | 428, 789 |
| HhaI | GCGC | 1 cut(s) | 367 |
| Hin1II | CATG | 6 cut(s) | 46, 427, 460, 658, 867, 951 |
| Hin6I | GCGC | 1 cut(s) | 365 |
| HinP1I | GCGC | 1 cut(s) | 365 |
| HincII | GTYRAC | 2 cut(s) | 130, 943 |
| HindII | GTYRAC | 2 cut(s) | 130, 943 |
| HinfI | GANTC | 2 cut(s) | 286, 895 |
| HphI | GGTGA | 4 cut(s) | 59, 511, 521, 787 |
| Hpy166II | GTNNAC | 3 cut(s) | 50, 130, 943 |
| Hpy188I | TCNGA | 4 cut(s) | 107, 433, 673, 745 |
| Hpy188III | TCNNGA | 4 cut(s) | 250, 290, 467, 614 |
| Hpy8I | GTNNAC | 3 cut(s) | 50, 130, 943 |
| HpyAV | CCTTC | 4 cut(s) | 251, 253, 496, 841 |
| HpyCH4III | ACNGT | 2 cut(s) | 196, 547 |
| HpyCH4IV | ACGT | 1 cut(s) | 37 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 373, 733 |
| HpyF3I | CTNAG | 2 cut(s) | 248, 718 |
| HpySE526I | ACGT | 1 cut(s) | 37 |
| Hsp92II | CATG | 6 cut(s) | 46, 427, 460, 658, 867, 951 |
| HspAI | GCGC | 1 cut(s) | 365 |
| Kzo9I | GATC | 1 cut(s) | 451 |
| Lsp1109I | GCAGC | 2 cut(s) | 354, 374 |
| LweI | GCATC | 2 cut(s) | 243, 912 |
| MaeII | ACGT | 1 cut(s) | 37 |
| MaeIII | GTNAC | 2 cut(s) | 526, 565 |
| MalI | GATC | 1 cut(s) | 453 |
| MboI | GATC | 1 cut(s) | 451 |
| MboII | GAAGA | 7 cut(s) | 8, 94, 493, 758, 828, 878, 890 |
| MfeI | CAATTG | 1 cut(s) | 389 |
| MlyI | GAGTC | 1 cut(s) | 889 |
| MnlI | CCTC | 6 cut(s) | 394, 439, 499, 596, 919, 944 |
| Mph1103I | ATGCAT | 1 cut(s) | 953 |
| MseI | TTAA | 5 cut(s) | 150, 300, 345, 560, 759 |
| MslI | CAYNNNNRTG | 1 cut(s) | 916 |
| MspA1I | CMGCKG | 1 cut(s) | 323 |
| MspR9I | CCNGG | 3 cut(s) | 162, 600, 969 |
| MunI | CAATTG | 1 cut(s) | 389 |
| Mva1269I | GAATGC | 2 cut(s) | 411, 729 |
| MvaI | CCWGG | 3 cut(s) | 162, 600, 969 |
| MvnI | CGCG | 1 cut(s) | 736 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 373, 733 |
| NdeI | CATATG | 2 cut(s) | 61, 205 |
| NdeII | GATC | 1 cut(s) | 451 |
| NlaIII | CATG | 6 cut(s) | 46, 427, 460, 658, 867, 951 |
| NmuCI | GTSAC | 1 cut(s) | 526 |
| NsiI | ATGCAT | 1 cut(s) | 953 |
| NspI | RCATGY | 1 cut(s) | 951 |
| NspV | TTCGAA | 1 cut(s) | 19 |
| PaeR7I | CTCGAG | 1 cut(s) | 465 |
| PctI | GAATGC | 2 cut(s) | 411, 729 |
| PfeI | GAWTC | 1 cut(s) | 286 |
| PfoI | TCCNGGA | 1 cut(s) | 598 |
| PkrI | GCNGC | 4 cut(s) | 325, 364, 369, 817 |
| PleI | GAGTC | 1 cut(s) | 889 |
| PpsI | GAGTC | 1 cut(s) | 889 |
| PsiI | TTATAA | 1 cut(s) | 665 |
| Psp6I | CCWGG | 3 cut(s) | 160, 598, 967 |
| PspGI | CCWGG | 3 cut(s) | 160, 598, 967 |
| PspPI | GGNCC | 2 cut(s) | 10, 965 |
| RseI | CAYNNNNRTG | 1 cut(s) | 916 |
| SaqAI | TTAA | 5 cut(s) | 150, 300, 345, 560, 759 |
| SatI | GCNGC | 4 cut(s) | 324, 363, 368, 816 |
| Sau3AI | GATC | 1 cut(s) | 451 |
| Sau96I | GGNCC | 2 cut(s) | 10, 965 |
| SchI | GAGTC | 1 cut(s) | 889 |
| ScrFI | CCNGG | 3 cut(s) | 162, 600, 969 |
| SfaNI | GCATC | 2 cut(s) | 243, 912 |
| SfcI | CTRYAG | 1 cut(s) | 582 |
| Sfr274I | CTCGAG | 1 cut(s) | 465 |
| SfuI | TTCGAA | 1 cut(s) | 19 |
| SinI | GGWCC | 2 cut(s) | 10, 965 |
| SlaI | CTCGAG | 1 cut(s) | 465 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 916 |
| SmlI | CTYRAG | 2 cut(s) | 465, 612 |
| SmoI | CTYRAG | 2 cut(s) | 465, 612 |
| SsiI | CCGC | 2 cut(s) | 323, 816 |
| StyD4I | CCNGG | 3 cut(s) | 160, 598, 967 |
| TaaI | ACNGT | 2 cut(s) | 196, 547 |
| TaiI | ACGT | 1 cut(s) | 40 |
| TaqI | TCGA | 2 cut(s) | 19, 466 |
| TauI | GCSGC | 2 cut(s) | 326, 818 |
| TfiI | GAWTC | 1 cut(s) | 286 |
| Tru1I | TTAA | 5 cut(s) | 150, 300, 345, 560, 759 |
| Tru9I | TTAA | 5 cut(s) | 150, 300, 345, 560, 759 |
| TscAI | CASTG | 1 cut(s) | 201 |
| TseFI | GTSAC | 1 cut(s) | 526 |
| TseI | GCWGC | 2 cut(s) | 362, 367 |
| Tsp45I | GTSAC | 1 cut(s) | 526 |
| TspDTI | ATGAA | 6 cut(s) | 17, 31, 124, 455, 536, 643 |
| TspRI | CASTG | 1 cut(s) | 201 |
| VpaK11BI | GGWCC | 2 cut(s) | 10, 965 |
| XapI | RAATTY | 2 cut(s) | 29, 231 |
| XceI | RCATGY | 1 cut(s) | 951 |
| XhoI | CTCGAG | 1 cut(s) | 465 |
| Zsp2I | ATGCAT | 1 cut(s) | 953 |