protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 940 |
| AccII | CGCG | 1 cut(s) | 264 |
| AciI | CCGC | 2 cut(s) | 216, 220 |
| AclWI | GGATC | 1 cut(s) | 935 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 3 cut(s) | 207, 788, 1061 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 740, 853 |
| AgsI | TTSAA | 4 cut(s) | 163, 292, 587, 983 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 403, 435 |
| AluBI | AGCT | 6 cut(s) | 23, 149, 167, 227, 440, 545 |
| AluI | AGCT | 6 cut(s) | 23, 149, 167, 227, 440, 545 |
| Alw21I | GWGCWC | 1 cut(s) | 468 |
| Alw26I | GTCTC | 1 cut(s) | 13 |
| AlwI | GGATC | 1 cut(s) | 935 |
| Ama87I | CYCGRG | 2 cut(s) | 801, 892 |
| AoxI | GGCC | 2 cut(s) | 3, 844 |
| ApeKI | GCWGC | 2 cut(s) | 20, 557 |
| ApoI | RAATTY | 3 cut(s) | 207, 788, 1061 |
| AseI | ATTAAT | 1 cut(s) | 809 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 810 |
| AspLEI | GCGC | 1 cut(s) | 266 |
| AspS9I | GGNCC | 2 cut(s) | 743, 844 |
| AvaI | CYCGRG | 2 cut(s) | 801, 892 |
| AvaII | GGWCC | 1 cut(s) | 743 |
| BauI | CACGAG | 1 cut(s) | 467 |
| BbsI | GAAGAC | 1 cut(s) | 516 |
| Bbv12I | GWGCWC | 1 cut(s) | 468 |
| BbvI | GCAGC | 2 cut(s) | 32, 544 |
| BccI | CCATC | 6 cut(s) | 330, 430, 527, 845, 859, 965 |
| BceAI | ACGGC | 2 cut(s) | 204, 319 |
| BciVI | GTATCC | 1 cut(s) | 265 |
| BcoDI | GTCTC | 1 cut(s) | 13 |
| BfaI | CTAG | 1 cut(s) | 461 |
| BfuI | GTATCC | 1 cut(s) | 265 |
| BglII | AGATCT | 2 cut(s) | 457, 724 |
| BisI | GCNGC | 2 cut(s) | 21, 558 |
| BlsI | GCNGC | 2 cut(s) | 22, 559 |
| Bme18I | GGWCC | 1 cut(s) | 743 |
| BmeT110I | CYCGRG | 2 cut(s) | 801, 892 |
| BmgT120I | GGNCC | 2 cut(s) | 743, 844 |
| BmsI | GCATC | 2 cut(s) | 7, 334 |
| BpiI | GAAGAC | 1 cut(s) | 516 |
| BpmI | CTGGAG | 1 cut(s) | 636 |
| BpuEI | CTTGAG | 1 cut(s) | 78 |
| BsaJI | CCNNGG | 3 cut(s) | 186, 504, 840 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 740, 853 |
| Bse1I | ACTGG | 2 cut(s) | 249, 653 |
| BseDI | CCNNGG | 3 cut(s) | 186, 504, 840 |
| BseGI | GGATG | 3 cut(s) | 112, 373, 394 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 740, 853 |
| BseNI | ACTGG | 2 cut(s) | 249, 653 |
| BseXI | GCAGC | 2 cut(s) | 32, 544 |
| BsgI | GTGCAG | 1 cut(s) | 512 |
| Bsh1236I | CGCG | 1 cut(s) | 264 |
| BshFI | GGCC | 2 cut(s) | 5, 846 |
| BsiHKAI | GWGCWC | 1 cut(s) | 468 |
| BsiHKCI | CYCGRG | 2 cut(s) | 801, 892 |
| BslFI | GGGAC | 1 cut(s) | 647 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 740, 853 |
| BsmAI | GTCTC | 1 cut(s) | 13 |
| BsmBI | CGTCTC | 1 cut(s) | 13 |
| BsmFI | GGGAC | 1 cut(s) | 647 |
| BsmI | GAATGC | 4 cut(s) | 187, 593, 857, 887 |
| BsnI | GGCC | 2 cut(s) | 5, 846 |
| BsoBI | CYCGRG | 2 cut(s) | 801, 892 |
| Bsp1286I | GDGCHC | 1 cut(s) | 468 |
| Bsp143I | GATC | 4 cut(s) | 457, 724, 927, 1017 |
| BspACI | CCGC | 2 cut(s) | 216, 220 |
| BspANI | GGCC | 2 cut(s) | 5, 846 |
| BspFNI | CGCG | 1 cut(s) | 264 |
| BspPI | GGATC | 1 cut(s) | 935 |
| BspQI | GCTCTTC | 1 cut(s) | 447 |
| BsrI | ACTGG | 2 cut(s) | 249, 653 |
| BssECI | CCNNGG | 3 cut(s) | 186, 504, 840 |
| BssMI | GATC | 4 cut(s) | 457, 724, 927, 1017 |
| BssNAI | GTATAC | 1 cut(s) | 941 |
| BssSI | CACGAG | 1 cut(s) | 467 |
| BssT1I | CCWWGG | 1 cut(s) | 840 |
| Bst1107I | GTATAC | 1 cut(s) | 941 |
| Bst2BI | CACGAG | 1 cut(s) | 467 |
| Bst6I | CTCTTC | 2 cut(s) | 447, 477 |
| BstC8I | GCNNGC | 3 cut(s) | 90, 218, 954 |
| BstDEI | CTNAG | 2 cut(s) | 514, 617 |
| BstDSI | CCRYGG | 1 cut(s) | 186 |
| BstF5I | GGATG | 3 cut(s) | 112, 373, 394 |
| BstFNI | CGCG | 1 cut(s) | 264 |
| BstHHI | GCGC | 1 cut(s) | 266 |
| BstKTI | GATC | 4 cut(s) | 460, 727, 930, 1020 |
| BstMAI | GTCTC | 1 cut(s) | 13 |
| BstMBI | GATC | 4 cut(s) | 457, 724, 927, 1017 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 263, 557 |
| BstUI | CGCG | 1 cut(s) | 264 |
| BstV1I | GCAGC | 2 cut(s) | 32, 544 |
| BstV2I | GAAGAC | 1 cut(s) | 516 |
| BstX2I | RGATCY | 3 cut(s) | 457, 724, 927 |
| BstYI | RGATCY | 3 cut(s) | 457, 724, 927 |
| BstZ17I | GTATAC | 1 cut(s) | 941 |
| BsuI | GTATCC | 1 cut(s) | 265 |
| BsuRI | GGCC | 2 cut(s) | 5, 846 |
| BtgI | CCRYGG | 1 cut(s) | 186 |
| BtsCI | GGATG | 3 cut(s) | 112, 373, 394 |
| BtsIMutI | CAGTG | 1 cut(s) | 967 |
| Cac8I | GCNNGC | 3 cut(s) | 90, 218, 954 |
| CfoI | GCGC | 1 cut(s) | 266 |
| Cfr13I | GGNCC | 2 cut(s) | 743, 844 |
| CviAII | CATG | 3 cut(s) | 448, 592, 784 |
| DdeI | CTNAG | 2 cut(s) | 514, 617 |
| DpnI | GATC | 4 cut(s) | 459, 726, 929, 1019 |
| DpnII | GATC | 4 cut(s) | 457, 724, 927, 1017 |
| DraI | TTTAAA | 1 cut(s) | 1066 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 2 cut(s) | 447, 477 |
| EarI | CTCTTC | 2 cut(s) | 447, 477 |
| Eco130I | CCWWGG | 1 cut(s) | 840 |
| Eco32I | GATATC | 1 cut(s) | 688 |
| Eco47I | GGWCC | 1 cut(s) | 743 |
| Eco88I | CYCGRG | 2 cut(s) | 801, 892 |
| EcoRV | GATATC | 1 cut(s) | 688 |
| EcoT14I | CCWWGG | 1 cut(s) | 840 |
| EcoT22I | ATGCAT | 1 cut(s) | 593 |
| ErhI | CCWWGG | 1 cut(s) | 840 |
| Esp3I | CGTCTC | 1 cut(s) | 13 |
| FaeI | CATG | 3 cut(s) | 451, 595, 787 |
| FaqI | GGGAC | 1 cut(s) | 647 |
| FatI | CATG | 3 cut(s) | 447, 591, 783 |
| FauI | CCCGC | 2 cut(s) | 209, 213 |
| FblI | GTMKAC | 1 cut(s) | 940 |
| Fnu4HI | GCNGC | 2 cut(s) | 21, 558 |
| FokI | GGATG | 3 cut(s) | 119, 380, 381 |
| Fsp4HI | GCNGC | 2 cut(s) | 21, 558 |
| FspBI | CTAG | 1 cut(s) | 461 |
| GlaI | GCGC | 1 cut(s) | 265 |
| GluI | GCNGC | 2 cut(s) | 21, 558 |
| GsuI | CTGGAG | 1 cut(s) | 636 |
| HaeIII | GGCC | 2 cut(s) | 5, 846 |
| HhaI | GCGC | 1 cut(s) | 266 |
| Hin1II | CATG | 3 cut(s) | 451, 595, 787 |
| Hin6I | GCGC | 1 cut(s) | 264 |
| HinP1I | GCGC | 1 cut(s) | 264 |
| HindIII | AAGCTT | 2 cut(s) | 165, 225 |
| HinfI | GANTC | 1 cut(s) | 649 |
| Hpy166II | GTNNAC | 2 cut(s) | 824, 941 |
| Hpy188I | TCNGA | 2 cut(s) | 505, 1056 |
| Hpy188III | TCNNGA | 6 cut(s) | 38, 95, 461, 803, 862, 892 |
| Hpy8I | GTNNAC | 2 cut(s) | 824, 941 |
| HpyAV | CCTTC | 3 cut(s) | 727, 891, 983 |
| HpyCH4V | TGCA | 7 cut(s) | 20, 404, 493, 560, 591, 768, 887 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 263, 557 |
| HpyF3I | CTNAG | 2 cut(s) | 514, 617 |
| Hsp92II | CATG | 3 cut(s) | 451, 595, 787 |
| HspAI | GCGC | 1 cut(s) | 264 |
| Kzo9I | GATC | 4 cut(s) | 457, 724, 927, 1017 |
| LguI | GCTCTTC | 1 cut(s) | 447 |
| LpnPI | CCDG | 7 cut(s) | 74, 262, 510, 666, 741, 747, 1014 |
| Lsp1109I | GCAGC | 2 cut(s) | 32, 544 |
| LweI | GCATC | 2 cut(s) | 7, 334 |
| MaeI | CTAG | 1 cut(s) | 461 |
| MaeIII | GTNAC | 3 cut(s) | 47, 646, 709 |
| MalI | GATC | 4 cut(s) | 459, 726, 929, 1019 |
| MboI | GATC | 4 cut(s) | 457, 724, 927, 1017 |
| MfeI | CAATTG | 1 cut(s) | 827 |
| MflI | RGATCY | 3 cut(s) | 457, 724, 927 |
| MhlI | GDGCHC | 1 cut(s) | 468 |
| MluCI | AATT | 8 cut(s) | 207, 788, 806, 810, 827, 911, 934, 1061 |
| MlyI | GAGTC | 1 cut(s) | 643 |
| MmeI | TCCRAC | 1 cut(s) | 518 |
| MnlI | CCTC | 5 cut(s) | 165, 245, 499, 560, 917 |
| Mph1103I | ATGCAT | 1 cut(s) | 593 |
| MroXI | GAANNNNTTC | 1 cut(s) | 810 |
| MseI | TTAA | 3 cut(s) | 75, 809, 1065 |
| MslI | CAYNNNNRTG | 1 cut(s) | 399 |
| MspA1I | CMGCKG | 1 cut(s) | 23 |
| MunI | CAATTG | 1 cut(s) | 827 |
| Mva1269I | GAATGC | 4 cut(s) | 187, 593, 857, 887 |
| MvnI | CGCG | 1 cut(s) | 264 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 263, 557 |
| NdeII | GATC | 4 cut(s) | 457, 724, 927, 1017 |
| NlaIII | CATG | 3 cut(s) | 451, 595, 787 |
| NmuCI | GTSAC | 2 cut(s) | 646, 709 |
| NsiI | ATGCAT | 1 cut(s) | 593 |
| PciSI | GCTCTTC | 1 cut(s) | 447 |
| PctI | GAATGC | 4 cut(s) | 187, 593, 857, 887 |
| PdmI | GAANNNNTTC | 1 cut(s) | 810 |
| PkrI | GCNGC | 2 cut(s) | 22, 559 |
| PleI | GAGTC | 1 cut(s) | 643 |
| PpsI | GAGTC | 1 cut(s) | 643 |
| PshBI | ATTAAT | 1 cut(s) | 809 |
| PspPI | GGNCC | 2 cut(s) | 743, 844 |
| PsuI | RGATCY | 3 cut(s) | 457, 724, 927 |
| PvuII | CAGCTG | 1 cut(s) | 23 |
| RseI | CAYNNNNRTG | 1 cut(s) | 399 |
| SapI | GCTCTTC | 1 cut(s) | 447 |
| SaqAI | TTAA | 3 cut(s) | 75, 809, 1065 |
| SatI | GCNGC | 2 cut(s) | 21, 558 |
| Sau3AI | GATC | 4 cut(s) | 457, 724, 927, 1017 |
| Sau96I | GGNCC | 2 cut(s) | 743, 844 |
| SchI | GAGTC | 1 cut(s) | 643 |
| SduI | GDGCHC | 1 cut(s) | 468 |
| SfaNI | GCATC | 2 cut(s) | 7, 334 |
| SinI | GGWCC | 1 cut(s) | 743 |
| SmiI | ATTTAAAT | 1 cut(s) | 1066 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 399 |
| SmlI | CTYRAG | 1 cut(s) | 93 |
| SmoI | CTYRAG | 1 cut(s) | 93 |
| Sse9I | AATT | 8 cut(s) | 207, 788, 806, 810, 827, 911, 934, 1061 |
| SsiI | CCGC | 2 cut(s) | 216, 220 |
| SspMI | CTAG | 1 cut(s) | 461 |
| StyI | CCWWGG | 1 cut(s) | 840 |
| SwaI | ATTTAAAT | 1 cut(s) | 1066 |
| TaqI | TCGA | 2 cut(s) | 342, 1009 |
| TasI | AATT | 8 cut(s) | 207, 788, 806, 810, 827, 911, 934, 1061 |
| Tru1I | TTAA | 3 cut(s) | 75, 809, 1065 |
| Tru9I | TTAA | 3 cut(s) | 75, 809, 1065 |
| TscAI | CASTG | 1 cut(s) | 967 |
| TseFI | GTSAC | 2 cut(s) | 646, 709 |
| TseI | GCWGC | 2 cut(s) | 20, 557 |
| Tsp45I | GTSAC | 2 cut(s) | 646, 709 |
| TspDTI | ATGAA | 6 cut(s) | 384, 686, 690, 800, 1002, 1028 |
| TspGWI | ACGGA | 1 cut(s) | 697 |
| TspRI | CASTG | 1 cut(s) | 967 |
| VpaK11BI | GGWCC | 1 cut(s) | 743 |
| VspI | ATTAAT | 1 cut(s) | 809 |
| XapI | RAATTY | 3 cut(s) | 207, 788, 1061 |
| XbaI | TCTAGA | 1 cut(s) | 460 |
| XmiI | GTMKAC | 1 cut(s) | 940 |
| XmnI | GAANNNNTTC | 1 cut(s) | 810 |
| XspI | CTAG | 1 cut(s) | 461 |
| Zsp2I | ATGCAT | 1 cut(s) | 593 |