protein ubiquitination
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 574 |
| AclWI | GGATC | 1 cut(s) | 24 |
| AcsI | RAATTY | 1 cut(s) | 221 |
| AcuI | CTGAAG | 1 cut(s) | 276 |
| AfaI | GTAC | 1 cut(s) | 133 |
| AgsI | TTSAA | 2 cut(s) | 23, 229 |
| AjiI | CACGTC | 1 cut(s) | 321 |
| AluBI | AGCT | 2 cut(s) | 26, 122 |
| AluI | AGCT | 2 cut(s) | 26, 122 |
| Alw21I | GWGCWC | 1 cut(s) | 148 |
| AlwI | GGATC | 1 cut(s) | 24 |
| AoxI | GGCC | 2 cut(s) | 237, 429 |
| ApeKI | GCWGC | 4 cut(s) | 26, 170, 173, 404 |
| ApoI | RAATTY | 1 cut(s) | 221 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 342 |
| AspS9I | GGNCC | 2 cut(s) | 237, 430 |
| AsuC2I | CCSGG | 1 cut(s) | 189 |
| BanII | GRGCYC | 1 cut(s) | 11 |
| BauI | CACGAG | 1 cut(s) | 533 |
| BbsI | GAAGAC | 2 cut(s) | 210, 371 |
| Bbv12I | GWGCWC | 1 cut(s) | 148 |
| BbvI | GCAGC | 4 cut(s) | 13, 157, 185, 391 |
| BccI | CCATC | 1 cut(s) | 203 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 23, 57 |
| BclI | TGATCA | 1 cut(s) | 87 |
| BcnI | CCSGG | 1 cut(s) | 189 |
| BfaI | CTAG | 1 cut(s) | 308 |
| BfmI | CTRYAG | 1 cut(s) | 171 |
| BisI | GCNGC | 4 cut(s) | 27, 171, 174, 405 |
| BlsI | GCNGC | 4 cut(s) | 28, 172, 175, 406 |
| Bme1390I | CCNGG | 1 cut(s) | 189 |
| BmgBI | CACGTC | 1 cut(s) | 321 |
| BmgT120I | GGNCC | 2 cut(s) | 237, 430 |
| BmrFI | CCNGG | 1 cut(s) | 189 |
| BmsI | GCATC | 2 cut(s) | 507, 613 |
| BpiI | GAAGAC | 2 cut(s) | 210, 371 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 50, 82 |
| BpuMI | CCSGG | 1 cut(s) | 189 |
| BsaJI | CCNNGG | 3 cut(s) | 399, 426, 601 |
| Bse1I | ACTGG | 1 cut(s) | 493 |
| BseDI | CCNNGG | 3 cut(s) | 399, 426, 601 |
| BseGI | GGATG | 1 cut(s) | 522 |
| BseNI | ACTGG | 1 cut(s) | 493 |
| BseXI | GCAGC | 4 cut(s) | 13, 157, 185, 391 |
| BshFI | GGCC | 2 cut(s) | 239, 431 |
| BsiHKAI | GWGCWC | 1 cut(s) | 148 |
| BsiSI | CCGG | 1 cut(s) | 189 |
| BsmI | GAATGC | 1 cut(s) | 176 |
| BsnI | GGCC | 2 cut(s) | 239, 431 |
| Bsp1286I | GDGCHC | 2 cut(s) | 11, 148 |
| Bsp1407I | TGTACA | 1 cut(s) | 131 |
| Bsp143I | GATC | 3 cut(s) | 16, 87, 414 |
| BspACI | CCGC | 1 cut(s) | 574 |
| BspANI | GGCC | 2 cut(s) | 239, 431 |
| BspMAI | CTGCAG | 1 cut(s) | 175 |
| BspPI | GGATC | 1 cut(s) | 24 |
| BsrGI | TGTACA | 1 cut(s) | 131 |
| BsrI | ACTGG | 1 cut(s) | 493 |
| BssECI | CCNNGG | 3 cut(s) | 399, 426, 601 |
| BssMI | GATC | 3 cut(s) | 16, 87, 414 |
| BssSI | CACGAG | 1 cut(s) | 533 |
| BssT1I | CCWWGG | 1 cut(s) | 601 |
| Bst2BI | CACGAG | 1 cut(s) | 533 |
| Bst4CI | ACNGT | 2 cut(s) | 136, 184 |
| Bst6I | CTCTTC | 1 cut(s) | 601 |
| BstAUI | TGTACA | 1 cut(s) | 131 |
| BstC8I | GCNNGC | 2 cut(s) | 7, 42 |
| BstDEI | CTNAG | 1 cut(s) | 69 |
| BstDSI | CCRYGG | 1 cut(s) | 399 |
| BstF5I | GGATG | 1 cut(s) | 522 |
| BstKTI | GATC | 3 cut(s) | 19, 90, 417 |
| BstMBI | GATC | 3 cut(s) | 16, 87, 414 |
| BstNSI | RCATGY | 2 cut(s) | 44, 144 |
| BstSCI | CCNGG | 1 cut(s) | 187 |
| BstSFI | CTRYAG | 1 cut(s) | 171 |
| BstV1I | GCAGC | 4 cut(s) | 13, 157, 185, 391 |
| BstV2I | GAAGAC | 2 cut(s) | 210, 371 |
| BstX2I | RGATCY | 1 cut(s) | 16 |
| BstYI | RGATCY | 1 cut(s) | 16 |
| BsuRI | GGCC | 2 cut(s) | 239, 431 |
| BtgI | CCRYGG | 1 cut(s) | 399 |
| BtrI | CACGTC | 1 cut(s) | 321 |
| BtsCI | GGATG | 1 cut(s) | 522 |
| BtsIMutI | CAGTG | 1 cut(s) | 486 |
| Cac8I | GCNNGC | 2 cut(s) | 7, 42 |
| Cfr13I | GGNCC | 2 cut(s) | 237, 430 |
| CseI | GACGC | 1 cut(s) | 272 |
| Csp6I | GTAC | 1 cut(s) | 132 |
| CviAII | CATG | 6 cut(s) | 41, 77, 141, 160, 409, 459 |
| CviJI | RGCY | 6 cut(s) | 9, 26, 122, 239, 404, 431 |
| CviKI_1 | RGCY | 6 cut(s) | 9, 26, 122, 239, 404, 431 |
| CviQI | GTAC | 1 cut(s) | 132 |
| DdeI | CTNAG | 1 cut(s) | 69 |
| DpnI | GATC | 3 cut(s) | 18, 89, 416 |
| DpnII | GATC | 3 cut(s) | 16, 87, 414 |
| Eam1104I | CTCTTC | 1 cut(s) | 601 |
| EarI | CTCTTC | 1 cut(s) | 601 |
| Eco130I | CCWWGG | 1 cut(s) | 601 |
| Eco24I | GRGCYC | 1 cut(s) | 11 |
| Eco57I | CTGAAG | 1 cut(s) | 276 |
| EcoO109I | RGGNCCY | 1 cut(s) | 237 |
| EcoT14I | CCWWGG | 1 cut(s) | 601 |
| EcoT38I | GRGCYC | 1 cut(s) | 11 |
| ErhI | CCWWGG | 1 cut(s) | 601 |
| FaeI | CATG | 6 cut(s) | 44, 80, 144, 163, 412, 462 |
| FatI | CATG | 6 cut(s) | 40, 76, 140, 159, 408, 458 |
| FbaI | TGATCA | 1 cut(s) | 87 |
| Fnu4HI | GCNGC | 4 cut(s) | 27, 171, 174, 405 |
| FokI | GGATG | 1 cut(s) | 529 |
| FriOI | GRGCYC | 1 cut(s) | 11 |
| Fsp4HI | GCNGC | 4 cut(s) | 27, 171, 174, 405 |
| FspBI | CTAG | 1 cut(s) | 308 |
| GluI | GCNGC | 4 cut(s) | 27, 171, 174, 405 |
| HaeIII | GGCC | 2 cut(s) | 239, 431 |
| HapII | CCGG | 1 cut(s) | 189 |
| HgaI | GACGC | 1 cut(s) | 272 |
| Hin1II | CATG | 6 cut(s) | 44, 80, 144, 163, 412, 462 |
| HinfI | GANTC | 1 cut(s) | 455 |
| HpaII | CCGG | 1 cut(s) | 189 |
| Hpy188I | TCNGA | 1 cut(s) | 384 |
| Hpy188III | TCNNGA | 2 cut(s) | 20, 226 |
| HpyCH4III | ACNGT | 2 cut(s) | 136, 184 |
| HpyCH4IV | ACGT | 3 cut(s) | 104, 320, 325 |
| HpyCH4V | TGCA | 6 cut(s) | 29, 140, 173, 260, 332, 520 |
| HpyF3I | CTNAG | 1 cut(s) | 69 |
| HpySE526I | ACGT | 3 cut(s) | 104, 320, 325 |
| Hsp92II | CATG | 6 cut(s) | 44, 80, 144, 163, 412, 462 |
| Ksp22I | TGATCA | 1 cut(s) | 87 |
| Kzo9I | GATC | 3 cut(s) | 16, 87, 414 |
| LpnPI | CCDG | 4 cut(s) | 24, 202, 446, 474 |
| Lsp1109I | GCAGC | 4 cut(s) | 13, 157, 185, 391 |
| LweI | GCATC | 2 cut(s) | 507, 613 |
| MaeI | CTAG | 1 cut(s) | 308 |
| MaeII | ACGT | 3 cut(s) | 104, 320, 325 |
| MaeIII | GTNAC | 2 cut(s) | 154, 321 |
| MalI | GATC | 3 cut(s) | 18, 89, 416 |
| MboI | GATC | 3 cut(s) | 16, 87, 414 |
| MboII | GAAGA | 6 cut(s) | 92, 215, 347, 350, 371, 618 |
| MfeI | CAATTG | 1 cut(s) | 498 |
| MflI | RGATCY | 1 cut(s) | 16 |
| MhlI | GDGCHC | 2 cut(s) | 11, 148 |
| MluCI | AATT | 5 cut(s) | 83, 221, 498, 521, 593 |
| MlyI | GAGTC | 1 cut(s) | 449 |
| MnlI | CCTC | 6 cut(s) | 7, 88, 136, 369, 436, 514 |
| MroXI | GAANNNNTTC | 1 cut(s) | 342 |
| MseI | TTAA | 1 cut(s) | 596 |
| MslI | CAYNNNNRTG | 1 cut(s) | 511 |
| MspI | CCGG | 1 cut(s) | 189 |
| MspR9I | CCNGG | 1 cut(s) | 189 |
| MunI | CAATTG | 1 cut(s) | 498 |
| Mva1269I | GAATGC | 1 cut(s) | 176 |
| NciI | CCSGG | 1 cut(s) | 189 |
| NdeII | GATC | 3 cut(s) | 16, 87, 414 |
| NlaIII | CATG | 6 cut(s) | 44, 80, 144, 163, 412, 462 |
| NmeAIII | GCCGAG | 1 cut(s) | 407 |
| NmuCI | GTSAC | 1 cut(s) | 321 |
| NspI | RCATGY | 2 cut(s) | 44, 144 |
| PaeI | GCATGC | 1 cut(s) | 44 |
| PctI | GAATGC | 1 cut(s) | 176 |
| PdmI | GAANNNNTTC | 1 cut(s) | 342 |
| PkrI | GCNGC | 4 cut(s) | 28, 172, 175, 406 |
| PleI | GAGTC | 1 cut(s) | 449 |
| PpsI | GAGTC | 1 cut(s) | 449 |
| PspPI | GGNCC | 2 cut(s) | 237, 430 |
| PstI | CTGCAG | 1 cut(s) | 175 |
| PsuI | RGATCY | 1 cut(s) | 16 |
| RsaI | GTAC | 1 cut(s) | 133 |
| RsaNI | GTAC | 1 cut(s) | 132 |
| RseI | CAYNNNNRTG | 1 cut(s) | 511 |
| SaqAI | TTAA | 1 cut(s) | 596 |
| SatI | GCNGC | 4 cut(s) | 27, 171, 174, 405 |
| Sau3AI | GATC | 3 cut(s) | 16, 87, 414 |
| Sau96I | GGNCC | 2 cut(s) | 237, 430 |
| SchI | GAGTC | 1 cut(s) | 449 |
| ScrFI | CCNGG | 1 cut(s) | 189 |
| SduI | GDGCHC | 2 cut(s) | 11, 148 |
| SetI | ASST | 8 cut(s) | 28, 107, 124, 128, 323, 328, 428, 603 |
| SfaNI | GCATC | 2 cut(s) | 507, 613 |
| SfcI | CTRYAG | 1 cut(s) | 171 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 511 |
| SphI | GCATGC | 1 cut(s) | 44 |
| Sse9I | AATT | 5 cut(s) | 83, 221, 498, 521, 593 |
| SsiI | CCGC | 1 cut(s) | 574 |
| SspMI | CTAG | 1 cut(s) | 308 |
| StyD4I | CCNGG | 1 cut(s) | 187 |
| StyI | CCWWGG | 1 cut(s) | 601 |
| TaaI | ACNGT | 2 cut(s) | 136, 184 |
| TaiI | ACGT | 3 cut(s) | 107, 323, 328 |
| TaqI | TCGA | 1 cut(s) | 361 |
| TasI | AATT | 5 cut(s) | 83, 221, 498, 521, 593 |
| TatI | WGTACW | 1 cut(s) | 131 |
| Tru1I | TTAA | 1 cut(s) | 596 |
| Tru9I | TTAA | 1 cut(s) | 596 |
| TscAI | CASTG | 1 cut(s) | 493 |
| TseFI | GTSAC | 1 cut(s) | 321 |
| TseI | GCWGC | 4 cut(s) | 26, 170, 173, 404 |
| Tsp45I | GTSAC | 1 cut(s) | 321 |
| TspDTI | ATGAA | 5 cut(s) | 62, 93, 125, 216, 603 |
| TspGWI | ACGGA | 1 cut(s) | 388 |
| TspRI | CASTG | 1 cut(s) | 493 |
| XapI | RAATTY | 1 cut(s) | 221 |
| XceI | RCATGY | 2 cut(s) | 44, 144 |
| XmnI | GAANNNNTTC | 1 cut(s) | 342 |
| XspI | CTAG | 1 cut(s) | 308 |