protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRRNT_2 | PF08263 | 30 - 69 | 9.8e-11 | Leucine rich repeat N-terminal domain |
| LRR_8 | PF13855 | 121 - 182 | 3e-07 | Leucine rich repeat |
| LRR_8 | PF13855 | 198 - 257 | 5.7e-11 | Leucine rich repeat |
| LRR_8 | PF13855 | 296 - 355 | 4.4e-06 | Leucine rich repeat |
| LRR_8 | PF13855 | 320 - 380 | 8.8e-07 | Leucine rich repeat |
| LRR_8 | PF13855 | 464 - 524 | 5.6e-08 | Leucine rich repeat |
| Island | PF20141 | 541 - 601 | 3.2e-19 | Brassinosteroid receptor island domain |
| LRR_14 | PF23598 | 597 - 682 | 4.8e-06 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 599 - 640 | 8.3e-06 | Leucine rich repeat |
| Pkinase | PF00069 | 835 - 1051 | 1.8e-42 | Protein kinase domain |
| PK_Tyr_Ser-Thr | PF07714 | 836 - 1113 | 3.3e-43 | Protein tyrosine and serine/threonine kinase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1839 |
| AarI | CACCTGC | 1 cut(s) | 3319 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1995 |
| Acc36I | ACCTGC | 1 cut(s) | 3319 |
| AccB1I | GGYRCC | 1 cut(s) | 2999 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3205 |
| AccI | GTMKAC | 1 cut(s) | 739 |
| AccII | CGCG | 5 cut(s) | 1851, 2379, 2773, 2775, 3348 |
| AclWI | GGATC | 8 cut(s) | 775, 788, 1069, 1338, 1576, 1733, 1746, 2779 |
| AcoI | YGGCCR | 1 cut(s) | 1945 |
| AcsI | RAATTY | 4 cut(s) | 502, 580, 1629, 1672 |
| AcuI | CTGAAG | 6 cut(s) | 5, 332, 1033, 1094, 1202, 2576 |
| AfaI | GTAC | 4 cut(s) | 1274, 1775, 1808, 2098 |
| AfeI | AGCGCT | 1 cut(s) | 3388 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 794, 1307, 2084, 2368, 2678, 2794, 3205 |
| AflII | CTTAAG | 2 cut(s) | 824, 1952 |
| AflIII | ACRYGT | 2 cut(s) | 492, 3321 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2887 |
| AhlI | ACTAGT | 1 cut(s) | 247 |
| AjnI | CCWGG | 6 cut(s) | 185, 1093, 1513, 2128, 3004, 3198 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 479, 511 |
| AleI | CACNNNNGTG | 2 cut(s) | 1649, 2979 |
| Alw21I | GWGCWC | 1 cut(s) | 2965 |
| Alw26I | GTCTC | 4 cut(s) | 368, 671, 1869, 2874 |
| Alw44I | GTGCAC | 1 cut(s) | 2961 |
| AlwI | GGATC | 8 cut(s) | 775, 788, 1069, 1338, 1576, 1733, 1746, 2779 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1117, 1261 |
| Aor51HI | AGCGCT | 1 cut(s) | 3388 |
| AoxI | GGCC | 5 cut(s) | 850, 922, 1780, 1945, 3314 |
| ApaLI | GTGCAC | 1 cut(s) | 2961 |
| ApoI | RAATTY | 4 cut(s) | 502, 580, 1629, 1672 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 419 |
| AspLEI | GCGC | 7 cut(s) | 1613, 1888, 2341, 2381, 2775, 3108, 3389 |
| AspS9I | GGNCC | 6 cut(s) | 136, 476, 751, 851, 923, 1781 |
| AsuC2I | CCSGG | 2 cut(s) | 550, 1008 |
| AsuHPI | GGTGA | 8 cut(s) | 379, 763, 946, 1756, 1937, 2359, 2621, 2708 |
| AvaII | GGWCC | 3 cut(s) | 136, 476, 751 |
| BaeGI | GKGCMC | 2 cut(s) | 2673, 2965 |
| BalI | TGGCCA | 1 cut(s) | 1947 |
| BamHI | GGATCC | 2 cut(s) | 780, 1738 |
| BanI | GGYRCC | 1 cut(s) | 2999 |
| BbsI | GAAGAC | 2 cut(s) | 1190, 1757 |
| Bbv12I | GWGCWC | 1 cut(s) | 2965 |
| BbvCI | CCTCAGC | 1 cut(s) | 1355 |
| BccI | CCATC | 4 cut(s) | 92, 2555, 2626, 3178 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 2357, 2391, 2583, 2617 |
| BciT130I | CCWGG | 6 cut(s) | 187, 1095, 1515, 2130, 3006, 3200 |
| BciVI | GTATCC | 1 cut(s) | 3127 |
| BclI | TGATCA | 1 cut(s) | 45 |
| BcnI | CCSGG | 2 cut(s) | 550, 1008 |
| BcoDI | GTCTC | 4 cut(s) | 368, 671, 1869, 2874 |
| BcuI | ACTAGT | 1 cut(s) | 247 |
| BfaI | CTAG | 7 cut(s) | 248, 524, 1595, 1961, 2711, 2993, 3143 |
| BfmI | CTRYAG | 3 cut(s) | 1034, 1253, 1991 |
| BfoI | RGCGCY | 2 cut(s) | 3109, 3390 |
| BfrI | CTTAAG | 2 cut(s) | 824, 1952 |
| BfuAI | ACCTGC | 1 cut(s) | 3319 |
| BfuI | GTATCC | 1 cut(s) | 3127 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1359 |
| BlpI | GCTNAGC | 2 cut(s) | 600, 1230 |
| Bme1390I | CCNGG | 8 cut(s) | 187, 550, 1008, 1095, 1515, 2130, 3006, 3200 |
| Bme18I | GGWCC | 3 cut(s) | 136, 476, 751 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2887 |
| BmgT120I | GGNCC | 6 cut(s) | 136, 476, 751, 851, 923, 1781 |
| BmiI | GGNNCC | 9 cut(s) | 138, 634, 782, 887, 925, 1219, 1740, 2145, 3001 |
| BmrFI | CCNGG | 8 cut(s) | 187, 550, 1008, 1095, 1515, 2130, 3006, 3200 |
| BmrI | ACTGGG | 2 cut(s) | 351, 2076 |
| BmuI | ACTGGG | 2 cut(s) | 351, 2076 |
| BpiI | GAAGAC | 2 cut(s) | 1190, 1757 |
| BpmI | CTGGAG | 2 cut(s) | 1116, 1596 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1355, 2453 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 600, 1230 |
| BpuEI | CTTGAG | 9 cut(s) | 95, 409, 1310, 1418, 1519, 1919, 2146, 2447, 2998 |
| BpuMI | CCSGG | 2 cut(s) | 550, 1008 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3138 |
| BsaI | GGTCTC | 2 cut(s) | 368, 671 |
| BsaJI | CCNNGG | 8 cut(s) | 486, 960, 1442, 1849, 2081, 2605, 2755, 3004 |
| BsaWI | WCCGGW | 3 cut(s) | 389, 398, 560 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 794, 1307, 2084, 2368, 2678, 2794, 3205 |
| Bse1I | ACTGG | 8 cut(s) | 357, 634, 667, 753, 774, 1579, 1915, 2071 |
| Bse3DI | GCAATG | 6 cut(s) | 1175, 1669, 2147, 2176, 2310, 2322 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3138 |
| BseBI | CCWGG | 6 cut(s) | 187, 1095, 1515, 2130, 3006, 3200 |
| BseDI | CCNNGG | 8 cut(s) | 486, 960, 1442, 1849, 2081, 2605, 2755, 3004 |
| BseGI | GGATG | 3 cut(s) | 2209, 2566, 2859 |
| BseJI | GATNNNNATC | 1 cut(s) | 3138 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 794, 1307, 2084, 2368, 2678, 2794, 3205 |
| BseMI | GCAATG | 6 cut(s) | 1175, 1669, 2147, 2176, 2310, 2322 |
| BseNI | ACTGG | 8 cut(s) | 357, 634, 667, 753, 774, 1579, 1915, 2071 |
| BseSI | GKGCMC | 2 cut(s) | 2673, 2965 |
| BseYI | CCCAGC | 1 cut(s) | 1585 |
| BsgI | GTGCAG | 1 cut(s) | 2844 |
| Bsh1236I | CGCG | 5 cut(s) | 1851, 2379, 2773, 2775, 3348 |
| BshFI | GGCC | 5 cut(s) | 852, 924, 1782, 1947, 3316 |
| BshNI | GGYRCC | 1 cut(s) | 2999 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2965 |
| BsiSI | CCGG | 5 cut(s) | 390, 399, 549, 561, 1007 |
| BslFI | GGGAC | 3 cut(s) | 268, 417, 2100 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 794, 1307, 2084, 2368, 2678, 2794, 3205 |
| BsmAI | GTCTC | 4 cut(s) | 368, 671, 1869, 2874 |
| BsmFI | GGGAC | 3 cut(s) | 268, 417, 2100 |
| BsmI | GAATGC | 1 cut(s) | 1128 |
| BsnI | GGCC | 5 cut(s) | 852, 924, 1782, 1947, 3316 |
| Bso31I | GGTCTC | 2 cut(s) | 368, 671 |
| Bsp1286I | GDGCHC | 2 cut(s) | 2673, 2965 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 600, 1230 |
| Bsp19I | CCATGG | 1 cut(s) | 2755 |
| Bsp68I | TCGCGA | 1 cut(s) | 3348 |
| BspANI | GGCC | 5 cut(s) | 852, 924, 1782, 1947, 3316 |
| BspFNI | CGCG | 5 cut(s) | 1851, 2379, 2773, 2775, 3348 |
| BspLI | GGNNCC | 9 cut(s) | 138, 634, 782, 887, 925, 1219, 1740, 2145, 3001 |
| BspMAI | CTGCAG | 2 cut(s) | 1257, 1995 |
| BspMI | ACCTGC | 1 cut(s) | 3319 |
| BspPI | GGATC | 8 cut(s) | 775, 788, 1069, 1338, 1576, 1733, 1746, 2779 |
| BspT107I | GGYRCC | 1 cut(s) | 2999 |
| BspTI | CTTAAG | 2 cut(s) | 824, 1952 |
| BspTNI | GGTCTC | 2 cut(s) | 368, 671 |
| BsrDI | GCAATG | 6 cut(s) | 1175, 1669, 2147, 2176, 2310, 2322 |
| BsrI | ACTGG | 8 cut(s) | 357, 634, 667, 753, 774, 1579, 1915, 2071 |
| BssECI | CCNNGG | 8 cut(s) | 486, 960, 1442, 1849, 2081, 2605, 2755, 3004 |
| BssT1I | CCWWGG | 6 cut(s) | 486, 960, 1442, 2081, 2605, 2755 |
| Bst2UI | CCWGG | 6 cut(s) | 187, 1095, 1515, 2130, 3006, 3200 |
| Bst4CI | ACNGT | 2 cut(s) | 1217, 2615 |
| Bst6I | CTCTTC | 2 cut(s) | 316, 2694 |
| BstAFI | CTTAAG | 2 cut(s) | 824, 1952 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2822 |
| BstC8I | GCNNGC | 8 cut(s) | 211, 971, 1024, 1470, 1949, 2366, 2370, 2998 |
| BstDSI | CCRYGG | 2 cut(s) | 1849, 2755 |
| BstEII | GGTNACC | 1 cut(s) | 2609 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 792 |
| BstF5I | GGATG | 3 cut(s) | 2209, 2566, 2859 |
| BstFNI | CGCG | 5 cut(s) | 1851, 2379, 2773, 2775, 3348 |
| BstH2I | RGCGCY | 2 cut(s) | 3109, 3390 |
| BstHHI | GCGC | 7 cut(s) | 1613, 1888, 2341, 2381, 2775, 3108, 3389 |
| BstMAI | GTCTC | 4 cut(s) | 368, 671, 1869, 2874 |
| BstNI | CCWGG | 6 cut(s) | 187, 1095, 1515, 2130, 3006, 3200 |
| BstNSI | RCATGY | 4 cut(s) | 204, 496, 807, 3325 |
| BstPI | GGTNACC | 1 cut(s) | 2609 |
| BstSCI | CCNGG | 8 cut(s) | 185, 548, 1006, 1093, 1513, 2128, 3004, 3198 |
| BstSFI | CTRYAG | 3 cut(s) | 1034, 1253, 1991 |
| BstSLI | GKGCMC | 2 cut(s) | 2673, 2965 |
| BstUI | CGCG | 5 cut(s) | 1851, 2379, 2773, 2775, 3348 |
| BstV2I | GAAGAC | 2 cut(s) | 1190, 1757 |
| BstX2I | RGATCY | 5 cut(s) | 780, 1330, 1581, 1738, 2784 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 186 |
| BstYI | RGATCY | 5 cut(s) | 780, 1330, 1581, 1738, 2784 |
| BsuI | GTATCC | 1 cut(s) | 3127 |
| BsuRI | GGCC | 5 cut(s) | 852, 924, 1782, 1947, 3316 |
| BtgI | CCRYGG | 2 cut(s) | 1849, 2755 |
| BtgZI | GCGATG | 2 cut(s) | 1923, 3072 |
| BtsCI | GGATG | 3 cut(s) | 2209, 2566, 2859 |
| BtsI | GCAGTG | 1 cut(s) | 3045 |
| BtsIMutI | CAGTG | 7 cut(s) | 41, 364, 660, 853, 1409, 1435, 3045 |
| BtuMI | TCGCGA | 1 cut(s) | 3348 |
| BveI | ACCTGC | 1 cut(s) | 3319 |
| Cac8I | GCNNGC | 8 cut(s) | 211, 971, 1024, 1470, 1949, 2366, 2370, 2998 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1117, 1261 |
| CfoI | GCGC | 7 cut(s) | 1613, 1888, 2341, 2381, 2775, 3108, 3389 |
| Cfr13I | GGNCC | 6 cut(s) | 136, 476, 751, 851, 923, 1781 |
| Cfr42I | CCGCGG | 1 cut(s) | 1852 |
| CseI | GACGC | 1 cut(s) | 2779 |
| CsiI | ACCWGGT | 1 cut(s) | 185 |
| Csp6I | GTAC | 4 cut(s) | 1273, 1774, 1807, 2097 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 829, 864, 1287, 1322, 2837, 2872 |
| CviQI | GTAC | 4 cut(s) | 1273, 1774, 1807, 2097 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1995 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2887 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1995 |
| EaeI | YGGCCR | 1 cut(s) | 1945 |
| Eam1104I | CTCTTC | 2 cut(s) | 316, 2694 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2887 |
| EarI | CTCTTC | 2 cut(s) | 316, 2694 |
| EciI | GGCGGA | 1 cut(s) | 2344 |
| Eco130I | CCWWGG | 6 cut(s) | 486, 960, 1442, 2081, 2605, 2755 |
| Eco147I | AGGCCT | 1 cut(s) | 3316 |
| Eco31I | GGTCTC | 2 cut(s) | 368, 671 |
| Eco32I | GATATC | 2 cut(s) | 1065, 1407 |
| Eco47I | GGWCC | 3 cut(s) | 136, 476, 751 |
| Eco47III | AGCGCT | 1 cut(s) | 3388 |
| Eco57I | CTGAAG | 6 cut(s) | 5, 332, 1033, 1094, 1202, 2576 |
| Eco91I | GGTNACC | 1 cut(s) | 2609 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 792 |
| EcoO109I | RGGNCCY | 3 cut(s) | 136, 476, 923 |
| EcoO65I | GGTNACC | 1 cut(s) | 2609 |
| EcoRI | GAATTC | 4 cut(s) | 502, 580, 1629, 1672 |
| EcoRII | CCWGG | 6 cut(s) | 185, 1093, 1513, 2128, 3004, 3198 |
| EcoRV | GATATC | 2 cut(s) | 1065, 1407 |
| EcoT14I | CCWWGG | 6 cut(s) | 486, 960, 1442, 2081, 2605, 2755 |
| EcoT22I | ATGCAT | 1 cut(s) | 1978 |
| ErhI | CCWWGG | 6 cut(s) | 486, 960, 1442, 2081, 2605, 2755 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 322, 354, 3110, 3142, 3267, 3299 |
| FaqI | GGGAC | 3 cut(s) | 268, 417, 2100 |
| FauI | CCCGC | 2 cut(s) | 1086, 1844 |
| FbaI | TGATCA | 1 cut(s) | 45 |
| FblI | GTMKAC | 1 cut(s) | 739 |
| FokI | GGATG | 3 cut(s) | 2216, 2573, 2846 |
| FspBI | CTAG | 7 cut(s) | 248, 524, 1595, 1961, 2711, 2993, 3143 |
| GlaI | GCGC | 7 cut(s) | 1612, 1887, 2340, 2380, 2774, 3107, 3388 |
| GsaI | CCCAGC | 1 cut(s) | 1589 |
| GsuI | CTGGAG | 2 cut(s) | 1116, 1596 |
| HaeII | RGCGCY | 2 cut(s) | 3109, 3390 |
| HaeIII | GGCC | 5 cut(s) | 852, 924, 1782, 1947, 3316 |
| HapII | CCGG | 5 cut(s) | 390, 399, 549, 561, 1007 |
| HgaI | GACGC | 1 cut(s) | 2779 |
| HhaI | GCGC | 7 cut(s) | 1613, 1888, 2341, 2381, 2775, 3108, 3389 |
| Hin6I | GCGC | 7 cut(s) | 1611, 1886, 2339, 2379, 2773, 3106, 3387 |
| HinP1I | GCGC | 7 cut(s) | 1611, 1886, 2339, 2379, 2773, 3106, 3387 |
| HindIII | AAGCTT | 1 cut(s) | 827 |
| HpaII | CCGG | 5 cut(s) | 390, 399, 549, 561, 1007 |
| HphI | GGTGA | 8 cut(s) | 379, 763, 946, 1756, 1937, 2359, 2621, 2708 |
| Hpy166II | GTNNAC | 5 cut(s) | 245, 740, 1800, 2099, 2963 |
| Hpy8I | GTNNAC | 5 cut(s) | 245, 740, 1800, 2099, 2963 |
| HpyCH4III | ACNGT | 2 cut(s) | 1217, 2615 |
| HpyCH4IV | ACGT | 1 cut(s) | 2898 |
| HpySE526I | ACGT | 1 cut(s) | 2898 |
| HspAI | GCGC | 7 cut(s) | 1611, 1886, 2339, 2379, 2773, 3106, 3387 |
| Ksp22I | TGATCA | 1 cut(s) | 45 |
| KspI | CCGCGG | 1 cut(s) | 1852 |
| LmnI | GCTCC | 7 cut(s) | 891, 1097, 1114, 1851, 2757, 3088, 3375 |
| MabI | ACCWGGT | 1 cut(s) | 185 |
| MaeI | CTAG | 7 cut(s) | 248, 524, 1595, 1961, 2711, 2993, 3143 |
| MaeII | ACGT | 1 cut(s) | 2898 |
| MaeIII | GTNAC | 6 cut(s) | 102, 980, 2609, 3094, 3227, 3277 |
| MboII | GAAGA | 9 cut(s) | 23, 270, 303, 1195, 1762, 2362, 2711, 2756, 3257 |
| MfeI | CAATTG | 1 cut(s) | 2854 |
| MflI | RGATCY | 5 cut(s) | 780, 1330, 1581, 1738, 2784 |
| MhlI | GDGCHC | 2 cut(s) | 2673, 2965 |
| MlsI | TGGCCA | 1 cut(s) | 1947 |
| MluNI | TGGCCA | 1 cut(s) | 1947 |
| MlyI | GAGTC | 3 cut(s) | 110, 387, 2127 |
| MmeI | TCCRAC | 8 cut(s) | 758, 913, 930, 1224, 1530, 1766, 2043, 2886 |
| Mox20I | TGGCCA | 1 cut(s) | 1947 |
| Mph1103I | ATGCAT | 1 cut(s) | 1978 |
| MroXI | GAANNNNTTC | 1 cut(s) | 419 |
| MscI | TGGCCA | 1 cut(s) | 1947 |
| MseI | TTAA | 5 cut(s) | 470, 825, 1953, 2358, 2652 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1649, 2258, 2315, 2979, 3286 |
| Msp20I | TGGCCA | 1 cut(s) | 1947 |
| MspA1I | CMGCKG | 6 cut(s) | 65, 237, 1180, 1261, 1359, 1851 |
| MspCI | CTTAAG | 2 cut(s) | 824, 1952 |
| MspI | CCGG | 5 cut(s) | 390, 399, 549, 561, 1007 |
| MspR9I | CCNGG | 8 cut(s) | 187, 550, 1008, 1095, 1515, 2130, 3006, 3200 |
| MunI | CAATTG | 1 cut(s) | 2854 |
| Mva1269I | GAATGC | 1 cut(s) | 1128 |
| MvaI | CCWGG | 6 cut(s) | 187, 1095, 1515, 2130, 3006, 3200 |
| MvnI | CGCG | 5 cut(s) | 1851, 2379, 2773, 2775, 3348 |
| NciI | CCSGG | 2 cut(s) | 550, 1008 |
| NcoI | CCATGG | 1 cut(s) | 2755 |
| NlaIV | GGNNCC | 9 cut(s) | 138, 634, 782, 887, 925, 1219, 1740, 2145, 3001 |
| NmeAIII | GCCGAG | 2 cut(s) | 124, 1587 |
| NmuCI | GTSAC | 4 cut(s) | 102, 2609, 3094, 3227 |
| NruI | TCGCGA | 1 cut(s) | 3348 |
| NsiI | ATGCAT | 1 cut(s) | 1978 |
| NspI | RCATGY | 4 cut(s) | 204, 496, 807, 3325 |
| OliI | CACNNNNGTG | 2 cut(s) | 1649, 2979 |
| PaqCI | CACCTGC | 1 cut(s) | 3319 |
| PceI | AGGCCT | 1 cut(s) | 3316 |
| PciI | ACATGT | 2 cut(s) | 492, 3321 |
| PctI | GAATGC | 1 cut(s) | 1128 |
| PdmI | GAANNNNTTC | 1 cut(s) | 419 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3205 |
| PfoI | TCCNGGA | 2 cut(s) | 1093, 2128 |
| PleI | GAGTC | 3 cut(s) | 109, 387, 2127 |
| PpsI | GAGTC | 3 cut(s) | 109, 387, 2127 |
| PpuMI | RGGWCCY | 2 cut(s) | 136, 476 |
| PscI | ACATGT | 2 cut(s) | 492, 3321 |
| PsiI | TTATAA | 1 cut(s) | 1839 |
| Psp5II | RGGWCCY | 2 cut(s) | 136, 476 |
| Psp6I | CCWGG | 6 cut(s) | 185, 1093, 1513, 2128, 3004, 3198 |
| PspEI | GGTNACC | 1 cut(s) | 2609 |
| PspFI | CCCAGC | 1 cut(s) | 1585 |
| PspGI | CCWGG | 6 cut(s) | 185, 1093, 1513, 2128, 3004, 3198 |
| PspN4I | GGNNCC | 9 cut(s) | 138, 634, 782, 887, 925, 1219, 1740, 2145, 3001 |
| PspPI | GGNCC | 6 cut(s) | 136, 476, 751, 851, 923, 1781 |
| PspPPI | RGGWCCY | 2 cut(s) | 136, 476 |
| PstI | CTGCAG | 2 cut(s) | 1257, 1995 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1117, 1261 |
| PsuI | RGATCY | 5 cut(s) | 780, 1330, 1581, 1738, 2784 |
| PvuII | CAGCTG | 3 cut(s) | 65, 1180, 1261 |
| RruI | TCGCGA | 1 cut(s) | 3348 |
| RsaI | GTAC | 4 cut(s) | 1274, 1775, 1808, 2098 |
| RsaNI | GTAC | 4 cut(s) | 1273, 1774, 1807, 2097 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1649, 2258, 2315, 2979, 3286 |
| SacII | CCGCGG | 1 cut(s) | 1852 |
| SaqAI | TTAA | 5 cut(s) | 470, 825, 1953, 2358, 2652 |
| Sau96I | GGNCC | 6 cut(s) | 136, 476, 751, 851, 923, 1781 |
| SchI | GAGTC | 3 cut(s) | 110, 387, 2127 |
| ScrFI | CCNGG | 8 cut(s) | 187, 550, 1008, 1095, 1515, 2130, 3006, 3200 |
| SduI | GDGCHC | 2 cut(s) | 2673, 2965 |
| SexAI | ACCWGGT | 1 cut(s) | 185 |
| SfcI | CTRYAG | 3 cut(s) | 1034, 1253, 1991 |
| Sfr303I | CCGCGG | 1 cut(s) | 1852 |
| SgrBI | CCGCGG | 1 cut(s) | 1852 |
| SinI | GGWCC | 3 cut(s) | 136, 476, 751 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1649, 2258, 2315, 2979, 3286 |
| SpeI | ACTAGT | 1 cut(s) | 247 |
| SseBI | AGGCCT | 1 cut(s) | 3316 |
| SspMI | CTAG | 7 cut(s) | 248, 524, 1595, 1961, 2711, 2993, 3143 |
| StuI | AGGCCT | 1 cut(s) | 3316 |
| StyD4I | CCNGG | 8 cut(s) | 185, 548, 1006, 1093, 1513, 2128, 3004, 3198 |
| StyI | CCWWGG | 6 cut(s) | 486, 960, 1442, 2081, 2605, 2755 |
| TaaI | ACNGT | 2 cut(s) | 1217, 2615 |
| TaiI | ACGT | 1 cut(s) | 2901 |
| TaqI | TCGA | 9 cut(s) | 267, 441, 653, 1013, 1423, 2221, 2567, 2742, 3286 |
| TatI | WGTACW | 2 cut(s) | 1773, 2096 |
| TauI | GCSGC | 1 cut(s) | 1362 |
| Tru1I | TTAA | 5 cut(s) | 470, 825, 1953, 2358, 2652 |
| Tru9I | TTAA | 5 cut(s) | 470, 825, 1953, 2358, 2652 |
| TscAI | CASTG | 7 cut(s) | 48, 364, 667, 853, 1416, 1435, 3052 |
| TseFI | GTSAC | 4 cut(s) | 102, 2609, 3094, 3227 |
| Tsp45I | GTSAC | 4 cut(s) | 102, 2609, 3094, 3227 |
| TspGWI | ACGGA | 2 cut(s) | 2266, 3128 |
| TspRI | CASTG | 7 cut(s) | 48, 364, 667, 853, 1416, 1435, 3052 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3205 |
| Vha464I | CTTAAG | 2 cut(s) | 824, 1952 |
| VneI | GTGCAC | 1 cut(s) | 2961 |
| VpaK11BI | GGWCC | 3 cut(s) | 136, 476, 751 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 792 |
| XapI | RAATTY | 4 cut(s) | 502, 580, 1629, 1672 |
| XbaI | TCTAGA | 1 cut(s) | 523 |
| XceI | RCATGY | 4 cut(s) | 204, 496, 807, 3325 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 442 |
| XmiI | GTMKAC | 1 cut(s) | 739 |
| XmnI | GAANNNNTTC | 1 cut(s) | 419 |
| XspI | CTAG | 7 cut(s) | 248, 524, 1595, 1961, 2711, 2993, 3143 |
| Zsp2I | ATGCAT | 1 cut(s) | 1978 |