Domain of unknown function
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 399, 474, 1254 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 422 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 164 |
| AccI | GTMKAC | 4 cut(s) | 447, 781, 1075, 1450 |
| AccII | CGCG | 1 cut(s) | 1853 |
| AciI | CCGC | 1 cut(s) | 155 |
| AclWI | GGATC | 2 cut(s) | 135, 867 |
| AcoI | YGGCCR | 2 cut(s) | 666, 1129 |
| AcsI | RAATTY | 7 cut(s) | 14, 623, 661, 703, 1010, 1219, 2112 |
| AcuI | CTGAAG | 2 cut(s) | 696, 1710 |
| AcvI | CACGTG | 1 cut(s) | 889 |
| AdeI | CACNNNGTG | 1 cut(s) | 26 |
| AfaI | GTAC | 2 cut(s) | 349, 1567 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 164, 283, 575, 1024 |
| AflII | CTTAAG | 1 cut(s) | 733 |
| AflIII | ACRYGT | 1 cut(s) | 784 |
| AjnI | CCWGG | 2 cut(s) | 1444, 1999 |
| AluBI | AGCT | 6 cut(s) | 101, 500, 560, 713, 1388, 1459 |
| AluI | AGCT | 6 cut(s) | 101, 500, 560, 713, 1388, 1459 |
| Alw21I | GWGCWC | 1 cut(s) | 1582 |
| Alw26I | GTCTC | 3 cut(s) | 548, 1544, 2011 |
| AlwI | GGATC | 2 cut(s) | 135, 867 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1181, 1622 |
| AoxI | GGCC | 6 cut(s) | 351, 666, 1116, 1129, 1645, 1810 |
| ApeKI | GCWGC | 2 cut(s) | 1385, 1607 |
| ApoI | RAATTY | 7 cut(s) | 14, 623, 661, 703, 1010, 1219, 2112 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2051 |
| AspA2I | CCTAGG | 1 cut(s) | 959 |
| AspS9I | GGNCC | 4 cut(s) | 274, 578, 1116, 1997 |
| AsuC2I | CCSGG | 2 cut(s) | 1115, 2032 |
| AsuHPI | GGTGA | 2 cut(s) | 350, 1930 |
| AsuII | TTCGAA | 1 cut(s) | 916 |
| AvaII | GGWCC | 3 cut(s) | 274, 578, 1997 |
| AvrII | CCTAGG | 1 cut(s) | 959 |
| BalI | TGGCCA | 2 cut(s) | 668, 1131 |
| BbrPI | CACGTG | 1 cut(s) | 889 |
| BbsI | GAAGAC | 3 cut(s) | 68, 242, 684 |
| Bbv12I | GWGCWC | 1 cut(s) | 1582 |
| BbvCI | CCTCAGC | 1 cut(s) | 102 |
| BbvI | GCAGC | 2 cut(s) | 1397, 1619 |
| BceAI | ACGGC | 3 cut(s) | 273, 366, 1569 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 896, 906, 930, 940 |
| BciT130I | CCWGG | 2 cut(s) | 1446, 2001 |
| BclI | TGATCA | 1 cut(s) | 369 |
| BcnI | CCSGG | 2 cut(s) | 1115, 2032 |
| BcoDI | GTCTC | 3 cut(s) | 548, 1544, 2011 |
| BfaI | CTAG | 3 cut(s) | 497, 960, 1154 |
| BfrI | CTTAAG | 1 cut(s) | 733 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 904 |
| BisI | GCNGC | 2 cut(s) | 1386, 1608 |
| BlnI | CCTAGG | 1 cut(s) | 959 |
| BlsI | GCNGC | 2 cut(s) | 1387, 1609 |
| Bme1390I | CCNGG | 4 cut(s) | 1115, 1446, 2001, 2032 |
| Bme18I | GGWCC | 3 cut(s) | 274, 578, 1997 |
| BmgT120I | GGNCC | 4 cut(s) | 274, 578, 1116, 1997 |
| BmiI | GGNNCC | 3 cut(s) | 275, 276, 580 |
| BmrFI | CCNGG | 4 cut(s) | 1115, 1446, 2001, 2032 |
| BmsI | GCATC | 5 cut(s) | 799, 1168, 1372, 1687, 1944 |
| BoxI | GACNNNNGTC | 1 cut(s) | 246 |
| BpiI | GAAGAC | 3 cut(s) | 68, 242, 684 |
| BpmI | CTGGAG | 1 cut(s) | 487 |
| Bpu10I | CCTNAGC | 1 cut(s) | 102 |
| Bpu14I | TTCGAA | 1 cut(s) | 916 |
| BpuMI | CCSGG | 2 cut(s) | 1115, 2032 |
| Bsa29I | ATCGAT | 2 cut(s) | 1168, 1541 |
| BsaAI | YACGTR | 1 cut(s) | 889 |
| BsaJI | CCNNGG | 2 cut(s) | 959, 1018 |
| BsaWI | WCCGGW | 1 cut(s) | 553 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 64, 94 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 164, 283, 575, 1024 |
| Bse1I | ACTGG | 4 cut(s) | 158, 470, 488, 607 |
| Bse3DI | GCAATG | 3 cut(s) | 882, 922, 934 |
| BseBI | CCWGG | 2 cut(s) | 1446, 2001 |
| BseCI | ATCGAT | 2 cut(s) | 1168, 1541 |
| BseDI | CCNNGG | 2 cut(s) | 959, 1018 |
| BseGI | GGATG | 3 cut(s) | 1279, 1959, 2070 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 164, 283, 575, 1024 |
| BseMI | GCAATG | 3 cut(s) | 882, 922, 934 |
| BseMII | CTCAG | 2 cut(s) | 93, 1173 |
| BseNI | ACTGG | 4 cut(s) | 158, 470, 488, 607 |
| BseXI | GCAGC | 2 cut(s) | 1397, 1619 |
| BsgI | GTGCAG | 3 cut(s) | 320, 1626, 2059 |
| Bsh1236I | CGCG | 1 cut(s) | 1853 |
| BshFI | GGCC | 6 cut(s) | 353, 668, 1118, 1131, 1647, 1812 |
| BshVI | ATCGAT | 2 cut(s) | 1168, 1541 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1582 |
| BsiSI | CCGG | 3 cut(s) | 554, 1114, 2032 |
| BsiWI | CGTACG | 1 cut(s) | 347 |
| BslFI | GGGAC | 3 cut(s) | 287, 564, 1357 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 164, 283, 575, 1024 |
| BsmAI | GTCTC | 3 cut(s) | 548, 1544, 2011 |
| BsmBI | CGTCTC | 3 cut(s) | 548, 1544, 2011 |
| BsmFI | GGGAC | 3 cut(s) | 287, 564, 1357 |
| BsmI | GAATGC | 3 cut(s) | 721, 728, 1929 |
| BsnI | GGCC | 6 cut(s) | 353, 668, 1118, 1131, 1647, 1812 |
| Bsp119I | TTCGAA | 1 cut(s) | 916 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1582 |
| Bsp1407I | TGTACA | 1 cut(s) | 1565 |
| Bsp143I | GATC | 3 cut(s) | 140, 369, 859 |
| Bsp19I | CCATGG | 1 cut(s) | 1018 |
| BspACI | CCGC | 1 cut(s) | 155 |
| BspANI | GGCC | 6 cut(s) | 353, 668, 1118, 1131, 1647, 1812 |
| BspCNI | CTCAG | 2 cut(s) | 94, 1174 |
| BspDI | ATCGAT | 2 cut(s) | 1168, 1541 |
| BspFNI | CGCG | 1 cut(s) | 1853 |
| BspLI | GGNNCC | 3 cut(s) | 275, 276, 580 |
| BspPI | GGATC | 2 cut(s) | 135, 867 |
| BspT104I | TTCGAA | 1 cut(s) | 916 |
| BspTI | CTTAAG | 1 cut(s) | 733 |
| BsrDI | GCAATG | 3 cut(s) | 882, 922, 934 |
| BsrGI | TGTACA | 1 cut(s) | 1565 |
| BsrI | ACTGG | 4 cut(s) | 158, 470, 488, 607 |
| BssECI | CCNNGG | 2 cut(s) | 959, 1018 |
| BssMI | GATC | 3 cut(s) | 140, 369, 859 |
| BssNAI | GTATAC | 1 cut(s) | 782 |
| BssT1I | CCWWGG | 2 cut(s) | 959, 1018 |
| Bst1107I | GTATAC | 1 cut(s) | 782 |
| Bst2UI | CCWGG | 2 cut(s) | 1446, 2001 |
| Bst4CI | ACNGT | 9 cut(s) | 338, 454, 578, 779, 1080, 1125, 1365, 1570, 1618 |
| Bst6I | CTCTTC | 3 cut(s) | 306, 840, 1360 |
| BstAFI | CTTAAG | 1 cut(s) | 733 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 26 |
| BstAUI | TGTACA | 1 cut(s) | 1565 |
| BstBAI | YACGTR | 1 cut(s) | 889 |
| BstBI | TTCGAA | 1 cut(s) | 916 |
| BstC8I | GCNNGC | 4 cut(s) | 715, 719, 1923, 1927 |
| BstDEI | CTNAG | 2 cut(s) | 102, 1182 |
| BstDSI | CCRYGG | 1 cut(s) | 1018 |
| BstF5I | GGATG | 3 cut(s) | 1279, 1959, 2070 |
| BstFNI | CGCG | 1 cut(s) | 1853 |
| BstKTI | GATC | 3 cut(s) | 143, 372, 862 |
| BstMAI | GTCTC | 3 cut(s) | 548, 1544, 2011 |
| BstMBI | GATC | 3 cut(s) | 140, 369, 859 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 26, 904 |
| BstNI | CCWGG | 2 cut(s) | 1446, 2001 |
| BstNSI | RCATGY | 3 cut(s) | 721, 788, 1051 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 246 |
| BstSCI | CCNGG | 4 cut(s) | 1113, 1444, 1999, 2030 |
| BstUI | CGCG | 1 cut(s) | 1853 |
| BstV1I | GCAGC | 2 cut(s) | 1397, 1619 |
| BstV2I | GAAGAC | 3 cut(s) | 68, 242, 684 |
| BstX2I | RGATCY | 2 cut(s) | 140, 859 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1846 |
| BstYI | RGATCY | 2 cut(s) | 140, 859 |
| BstZ17I | GTATAC | 1 cut(s) | 782 |
| Bsu15I | ATCGAT | 2 cut(s) | 1168, 1541 |
| BsuRI | GGCC | 6 cut(s) | 353, 668, 1118, 1131, 1647, 1812 |
| BsuTUI | ATCGAT | 2 cut(s) | 1168, 1541 |
| BtgI | CCRYGG | 1 cut(s) | 1018 |
| BtgZI | GCGATG | 1 cut(s) | 308 |
| BtsCI | GGATG | 3 cut(s) | 1279, 1959, 2070 |
| BtsIMutI | CAGTG | 3 cut(s) | 450, 672, 775 |
| Cac8I | GCNNGC | 4 cut(s) | 715, 719, 1923, 1927 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1181, 1622 |
| Cfr13I | GGNCC | 4 cut(s) | 274, 578, 1116, 1997 |
| ClaI | ATCGAT | 2 cut(s) | 1168, 1541 |
| Csp6I | GTAC | 2 cut(s) | 348, 1566 |
| CviQI | GTAC | 2 cut(s) | 348, 1566 |
| DdeI | CTNAG | 2 cut(s) | 102, 1182 |
| DpnI | GATC | 3 cut(s) | 142, 371, 861 |
| DpnII | GATC | 3 cut(s) | 140, 369, 859 |
| DraI | TTTAAA | 1 cut(s) | 702 |
| DraIII | CACNNNGTG | 1 cut(s) | 26 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 422 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 422 |
| EaeI | YGGCCR | 2 cut(s) | 666, 1129 |
| Eam1104I | CTCTTC | 3 cut(s) | 306, 840, 1360 |
| EarI | CTCTTC | 3 cut(s) | 306, 840, 1360 |
| Eco130I | CCWWGG | 2 cut(s) | 959, 1018 |
| Eco147I | AGGCCT | 2 cut(s) | 1647, 1812 |
| Eco32I | GATATC | 1 cut(s) | 1312 |
| Eco47I | GGWCC | 3 cut(s) | 274, 578, 1997 |
| Eco57I | CTGAAG | 2 cut(s) | 696, 1710 |
| Eco72I | CACGTG | 1 cut(s) | 889 |
| EcoO109I | RGGNCCY | 1 cut(s) | 274 |
| EcoRII | CCWGG | 2 cut(s) | 1444, 1999 |
| EcoRV | GATATC | 1 cut(s) | 1312 |
| EcoT14I | CCWWGG | 2 cut(s) | 959, 1018 |
| EcoT22I | ATGCAT | 2 cut(s) | 723, 1049 |
| ErhI | CCWWGG | 2 cut(s) | 959, 1018 |
| Esp3I | CGTCTC | 3 cut(s) | 548, 1544, 2011 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 77, 109, 884, 916 |
| FaqI | GGGAC | 3 cut(s) | 287, 564, 1357 |
| FauI | CCCGC | 1 cut(s) | 162 |
| FbaI | TGATCA | 1 cut(s) | 369 |
| FblI | GTMKAC | 4 cut(s) | 447, 781, 1075, 1450 |
| Fnu4HI | GCNGC | 2 cut(s) | 1386, 1608 |
| FokI | GGATG | 3 cut(s) | 1286, 1966, 2077 |
| Fsp4HI | GCNGC | 2 cut(s) | 1386, 1608 |
| FspBI | CTAG | 3 cut(s) | 497, 960, 1154 |
| GluI | GCNGC | 2 cut(s) | 1386, 1608 |
| GsuI | CTGGAG | 1 cut(s) | 487 |
| HaeIII | GGCC | 6 cut(s) | 353, 668, 1118, 1131, 1647, 1812 |
| HapII | CCGG | 3 cut(s) | 554, 1114, 2032 |
| HincII | GTYRAC | 1 cut(s) | 415 |
| HindII | GTYRAC | 1 cut(s) | 415 |
| HinfI | GANTC | 7 cut(s) | 73, 850, 869, 964, 1277, 1289, 1507 |
| HpaII | CCGG | 3 cut(s) | 554, 1114, 2032 |
| HphI | GGTGA | 2 cut(s) | 350, 1930 |
| Hpy166II | GTNNAC | 6 cut(s) | 415, 448, 782, 1076, 1451, 1465 |
| Hpy188I | TCNGA | 6 cut(s) | 145, 428, 592, 615, 864, 1696 |
| Hpy188III | TCNNGA | 3 cut(s) | 38, 265, 1241 |
| Hpy8I | GTNNAC | 6 cut(s) | 415, 448, 782, 1076, 1451, 1465 |
| HpyAV | CCTTC | 3 cut(s) | 109, 876, 1658 |
| HpyCH4III | ACNGT | 9 cut(s) | 338, 454, 578, 779, 1080, 1125, 1365, 1570, 1618 |
| HpyCH4IV | ACGT | 4 cut(s) | 888, 1754, 2020, 2099 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 26, 904 |
| HpyF3I | CTNAG | 2 cut(s) | 102, 1182 |
| HpySE526I | ACGT | 4 cut(s) | 888, 1754, 2020, 2099 |
| KflI | GGGWCCC | 1 cut(s) | 274 |
| Ksp22I | TGATCA | 1 cut(s) | 369 |
| Kzo9I | GATC | 3 cut(s) | 140, 369, 859 |
| LmnI | GCTCC | 1 cut(s) | 1884 |
| Lsp1109I | GCAGC | 2 cut(s) | 1397, 1619 |
| LweI | GCATC | 5 cut(s) | 799, 1168, 1372, 1687, 1944 |
| MaeI | CTAG | 3 cut(s) | 497, 960, 1154 |
| MaeII | ACGT | 4 cut(s) | 888, 1754, 2020, 2099 |
| MaeIII | GTNAC | 3 cut(s) | 1057, 1144, 1755 |
| MalI | GATC | 3 cut(s) | 142, 371, 861 |
| MboI | GATC | 3 cut(s) | 140, 369, 859 |
| MfeI | CAATTG | 1 cut(s) | 514 |
| MflI | RGATCY | 2 cut(s) | 140, 859 |
| MhlI | GDGCHC | 1 cut(s) | 1582 |
| MlsI | TGGCCA | 2 cut(s) | 668, 1131 |
| MluNI | TGGCCA | 2 cut(s) | 668, 1131 |
| MlyI | GAGTC | 3 cut(s) | 82, 878, 958 |
| MmeI | TCCRAC | 1 cut(s) | 168 |
| Mox20I | TGGCCA | 2 cut(s) | 668, 1131 |
| Mph1103I | ATGCAT | 2 cut(s) | 723, 1049 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2051 |
| MscI | TGGCCA | 2 cut(s) | 668, 1131 |
| MseI | TTAA | 8 cut(s) | 84, 644, 701, 734, 972, 1217, 1751, 1971 |
| MslI | CAYNNNNRTG | 6 cut(s) | 377, 927, 999, 1089, 1844, 1948 |
| Msp20I | TGGCCA | 2 cut(s) | 668, 1131 |
| MspCI | CTTAAG | 1 cut(s) | 733 |
| MspI | CCGG | 3 cut(s) | 554, 1114, 2032 |
| MspR9I | CCNGG | 4 cut(s) | 1115, 1446, 2001, 2032 |
| MunI | CAATTG | 1 cut(s) | 514 |
| Mva1269I | GAATGC | 3 cut(s) | 721, 728, 1929 |
| MvaI | CCWGG | 2 cut(s) | 1446, 2001 |
| MvnI | CGCG | 1 cut(s) | 1853 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 26, 904 |
| NciI | CCSGG | 2 cut(s) | 1115, 2032 |
| NcoI | CCATGG | 1 cut(s) | 1018 |
| NdeII | GATC | 3 cut(s) | 140, 369, 859 |
| NlaIV | GGNNCC | 3 cut(s) | 275, 276, 580 |
| NmuCI | GTSAC | 2 cut(s) | 1057, 1755 |
| NsiI | ATGCAT | 2 cut(s) | 723, 1049 |
| NspI | RCATGY | 3 cut(s) | 721, 788, 1051 |
| NspV | TTCGAA | 1 cut(s) | 916 |
| PaeI | GCATGC | 1 cut(s) | 721 |
| PceI | AGGCCT | 2 cut(s) | 1647, 1812 |
| PciI | ACATGT | 1 cut(s) | 784 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1301, 2017 |
| PctI | GAATGC | 3 cut(s) | 721, 728, 1929 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2051 |
| PfeI | GAWTC | 4 cut(s) | 850, 1277, 1289, 1507 |
| Pfl23II | CGTACG | 1 cut(s) | 347 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 164 |
| PfoI | TCCNGGA | 1 cut(s) | 2030 |
| PkrI | GCNGC | 2 cut(s) | 1387, 1609 |
| PleI | GAGTC | 3 cut(s) | 81, 877, 958 |
| PmaCI | CACGTG | 1 cut(s) | 889 |
| PmlI | CACGTG | 1 cut(s) | 889 |
| PpsI | GAGTC | 3 cut(s) | 81, 877, 958 |
| Ppu21I | YACGTR | 1 cut(s) | 889 |
| PpuMI | RGGWCCY | 1 cut(s) | 274 |
| PscI | ACATGT | 1 cut(s) | 784 |
| PshAI | GACNNNNGTC | 1 cut(s) | 246 |
| PsiI | TTATAA | 3 cut(s) | 399, 474, 1254 |
| Psp5II | RGGWCCY | 1 cut(s) | 274 |
| Psp6I | CCWGG | 2 cut(s) | 1444, 1999 |
| PspCI | CACGTG | 1 cut(s) | 889 |
| PspGI | CCWGG | 2 cut(s) | 1444, 1999 |
| PspLI | CGTACG | 1 cut(s) | 347 |
| PspN4I | GGNNCC | 3 cut(s) | 275, 276, 580 |
| PspPI | GGNCC | 4 cut(s) | 274, 578, 1116, 1997 |
| PspPPI | RGGWCCY | 1 cut(s) | 274 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1181, 1622 |
| PsuI | RGATCY | 2 cut(s) | 140, 859 |
| RsaI | GTAC | 2 cut(s) | 349, 1567 |
| RsaNI | GTAC | 2 cut(s) | 348, 1566 |
| RseI | CAYNNNNRTG | 6 cut(s) | 377, 927, 999, 1089, 1844, 1948 |
| SaqAI | TTAA | 8 cut(s) | 84, 644, 701, 734, 972, 1217, 1751, 1971 |
| SatI | GCNGC | 2 cut(s) | 1386, 1608 |
| Sau3AI | GATC | 3 cut(s) | 140, 369, 859 |
| Sau96I | GGNCC | 4 cut(s) | 274, 578, 1116, 1997 |
| SchI | GAGTC | 3 cut(s) | 82, 878, 958 |
| ScrFI | CCNGG | 4 cut(s) | 1115, 1446, 2001, 2032 |
| SduI | GDGCHC | 1 cut(s) | 1582 |
| SfaNI | GCATC | 5 cut(s) | 799, 1168, 1372, 1687, 1944 |
| SfuI | TTCGAA | 1 cut(s) | 916 |
| SinI | GGWCC | 3 cut(s) | 274, 578, 1997 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 377, 927, 999, 1089, 1844, 1948 |
| SmlI | CTYRAG | 1 cut(s) | 733 |
| SmoI | CTYRAG | 1 cut(s) | 733 |
| SphI | GCATGC | 1 cut(s) | 721 |
| SseBI | AGGCCT | 2 cut(s) | 1647, 1812 |
| SsiI | CCGC | 1 cut(s) | 155 |
| SspI | AATATT | 3 cut(s) | 987, 1892, 2007 |
| SspMI | CTAG | 3 cut(s) | 497, 960, 1154 |
| StuI | AGGCCT | 2 cut(s) | 1647, 1812 |
| StyD4I | CCNGG | 4 cut(s) | 1113, 1444, 1999, 2030 |
| StyI | CCWWGG | 2 cut(s) | 959, 1018 |
| TaaI | ACNGT | 9 cut(s) | 338, 454, 578, 779, 1080, 1125, 1365, 1570, 1618 |
| TaiI | ACGT | 4 cut(s) | 891, 1757, 2023, 2102 |
| TaqI | TCGA | 4 cut(s) | 916, 1168, 1304, 1541 |
| TatI | WGTACW | 1 cut(s) | 1565 |
| TfiI | GAWTC | 4 cut(s) | 850, 1277, 1289, 1507 |
| Tru1I | TTAA | 8 cut(s) | 84, 644, 701, 734, 972, 1217, 1751, 1971 |
| Tru9I | TTAA | 8 cut(s) | 84, 644, 701, 734, 972, 1217, 1751, 1971 |
| TscAI | CASTG | 3 cut(s) | 457, 679, 782 |
| TseFI | GTSAC | 2 cut(s) | 1057, 1755 |
| TseI | GCWGC | 2 cut(s) | 1385, 1607 |
| Tsp45I | GTSAC | 2 cut(s) | 1057, 1755 |
| TspRI | CASTG | 3 cut(s) | 457, 679, 782 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 164 |
| Vha464I | CTTAAG | 1 cut(s) | 733 |
| VpaK11BI | GGWCC | 3 cut(s) | 274, 578, 1997 |
| XapI | RAATTY | 7 cut(s) | 14, 623, 661, 703, 1010, 1219, 2112 |
| XceI | RCATGY | 3 cut(s) | 721, 788, 1051 |
| XmaJI | CCTAGG | 1 cut(s) | 959 |
| XmiI | GTMKAC | 4 cut(s) | 447, 781, 1075, 1450 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2051 |
| XspI | CTAG | 3 cut(s) | 497, 960, 1154 |
| Zsp2I | ATGCAT | 2 cut(s) | 723, 1049 |