protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 177 - 288 | 1.1e-23 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 249 |
| AccII | CGCG | 1 cut(s) | 44 |
| AccIII | TCCGGA | 1 cut(s) | 771 |
| AciI | CCGC | 1 cut(s) | 645 |
| AclI | AACGTT | 2 cut(s) | 472, 1039 |
| AclWI | GGATC | 1 cut(s) | 272 |
| AcsI | RAATTY | 2 cut(s) | 100, 738 |
| AfaI | GTAC | 2 cut(s) | 413, 435 |
| AgsI | TTSAA | 1 cut(s) | 915 |
| AjiI | CACGTC | 2 cut(s) | 16, 747 |
| AjnI | CCWGG | 2 cut(s) | 373, 616 |
| AluBI | AGCT | 2 cut(s) | 40, 119 |
| AluI | AGCT | 2 cut(s) | 40, 119 |
| Alw21I | GWGCWC | 1 cut(s) | 577 |
| Alw26I | GTCTC | 2 cut(s) | 450, 539 |
| AlwI | GGATC | 1 cut(s) | 272 |
| Aor13HI | TCCGGA | 1 cut(s) | 771 |
| ApeKI | GCWGC | 4 cut(s) | 380, 394, 599, 854 |
| ApoI | RAATTY | 2 cut(s) | 100, 738 |
| AsuHPI | GGTGA | 1 cut(s) | 476 |
| AsuII | TTCGAA | 1 cut(s) | 114 |
| Bbv12I | GWGCWC | 1 cut(s) | 577 |
| BbvI | GCAGC | 4 cut(s) | 392, 406, 586, 841 |
| BccI | CCATC | 3 cut(s) | 191, 230, 352 |
| BciT130I | CCWGG | 2 cut(s) | 375, 618 |
| BcoDI | GTCTC | 2 cut(s) | 450, 539 |
| BfaI | CTAG | 2 cut(s) | 441, 734 |
| BisI | GCNGC | 4 cut(s) | 381, 395, 600, 855 |
| BlsI | GCNGC | 4 cut(s) | 382, 396, 601, 856 |
| Bme1390I | CCNGG | 2 cut(s) | 375, 618 |
| BmgBI | CACGTC | 2 cut(s) | 16, 747 |
| BmrFI | CCNGG | 2 cut(s) | 375, 618 |
| BmsI | GCATC | 3 cut(s) | 85, 679, 933 |
| BpmI | CTGGAG | 1 cut(s) | 639 |
| Bpu14I | TTCGAA | 1 cut(s) | 114 |
| BpuEI | CTTGAG | 1 cut(s) | 470 |
| Bsa29I | ATCGAT | 1 cut(s) | 654 |
| BsaBI | GATNNNNATC | 1 cut(s) | 75 |
| BsaI | GGTCTC | 1 cut(s) | 450 |
| BsaJI | CCNNGG | 2 cut(s) | 374, 482 |
| BsaWI | WCCGGW | 1 cut(s) | 771 |
| Bse118I | RCCGGY | 1 cut(s) | 635 |
| Bse1I | ACTGG | 1 cut(s) | 923 |
| Bse3DI | GCAATG | 3 cut(s) | 383, 413, 825 |
| Bse8I | GATNNNNATC | 1 cut(s) | 75 |
| BseAI | TCCGGA | 1 cut(s) | 771 |
| BseBI | CCWGG | 2 cut(s) | 375, 618 |
| BseCI | ATCGAT | 1 cut(s) | 654 |
| BseDI | CCNNGG | 2 cut(s) | 374, 482 |
| BseGI | GGATG | 3 cut(s) | 288, 543, 948 |
| BseJI | GATNNNNATC | 1 cut(s) | 75 |
| BseMI | GCAATG | 3 cut(s) | 383, 413, 825 |
| BseMII | CTCAG | 1 cut(s) | 267 |
| BseNI | ACTGG | 1 cut(s) | 923 |
| BseXI | GCAGC | 4 cut(s) | 392, 406, 586, 841 |
| Bsh1236I | CGCG | 1 cut(s) | 44 |
| BshVI | ATCGAT | 1 cut(s) | 654 |
| BsiHKAI | GWGCWC | 1 cut(s) | 577 |
| BsiSI | CCGG | 2 cut(s) | 636, 772 |
| BslFI | GGGAC | 1 cut(s) | 325 |
| BsmAI | GTCTC | 2 cut(s) | 450, 539 |
| BsmFI | GGGAC | 1 cut(s) | 325 |
| BsmI | GAATGC | 1 cut(s) | 647 |
| Bso31I | GGTCTC | 1 cut(s) | 450 |
| Bsp119I | TTCGAA | 1 cut(s) | 114 |
| Bsp1286I | GDGCHC | 1 cut(s) | 577 |
| Bsp13I | TCCGGA | 1 cut(s) | 771 |
| Bsp143I | GATC | 1 cut(s) | 264 |
| BspACI | CCGC | 1 cut(s) | 645 |
| BspCNI | CTCAG | 1 cut(s) | 268 |
| BspDI | ATCGAT | 1 cut(s) | 654 |
| BspEI | TCCGGA | 1 cut(s) | 771 |
| BspFNI | CGCG | 1 cut(s) | 44 |
| BspPI | GGATC | 1 cut(s) | 272 |
| BspT104I | TTCGAA | 1 cut(s) | 114 |
| BspTNI | GGTCTC | 1 cut(s) | 450 |
| BsrDI | GCAATG | 3 cut(s) | 383, 413, 825 |
| BsrFI | RCCGGY | 1 cut(s) | 635 |
| BsrI | ACTGG | 1 cut(s) | 923 |
| BssAI | RCCGGY | 1 cut(s) | 635 |
| BssECI | CCNNGG | 2 cut(s) | 374, 482 |
| BssMI | GATC | 1 cut(s) | 264 |
| BssT1I | CCWWGG | 1 cut(s) | 482 |
| Bst2UI | CCWGG | 2 cut(s) | 375, 618 |
| Bst4CI | ACNGT | 4 cut(s) | 291, 464, 509, 565 |
| Bst6I | CTCTTC | 1 cut(s) | 45 |
| BstBI | TTCGAA | 1 cut(s) | 114 |
| BstC8I | GCNNGC | 2 cut(s) | 42, 46 |
| BstDEI | CTNAG | 1 cut(s) | 276 |
| BstF5I | GGATG | 3 cut(s) | 288, 543, 948 |
| BstFNI | CGCG | 1 cut(s) | 44 |
| BstKTI | GATC | 1 cut(s) | 267 |
| BstMAI | GTCTC | 2 cut(s) | 450, 539 |
| BstMBI | GATC | 1 cut(s) | 264 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 104, 394, 403, 851 |
| BstNI | CCWGG | 2 cut(s) | 375, 618 |
| BstSCI | CCNGG | 2 cut(s) | 373, 616 |
| BstUI | CGCG | 1 cut(s) | 44 |
| BstV1I | GCAGC | 4 cut(s) | 392, 406, 586, 841 |
| BstX2I | RGATCY | 1 cut(s) | 264 |
| BstYI | RGATCY | 1 cut(s) | 264 |
| Bsu15I | ATCGAT | 1 cut(s) | 654 |
| BsuTUI | ATCGAT | 1 cut(s) | 654 |
| BtrI | CACGTC | 2 cut(s) | 16, 747 |
| BtsCI | GGATG | 3 cut(s) | 288, 543, 948 |
| BtsIMutI | CAGTG | 2 cut(s) | 514, 561 |
| Cac8I | GCNNGC | 2 cut(s) | 42, 46 |
| Cfr10I | RCCGGY | 1 cut(s) | 635 |
| ClaI | ATCGAT | 1 cut(s) | 654 |
| Csp6I | GTAC | 2 cut(s) | 412, 434 |
| CviAII | CATG | 2 cut(s) | 589, 835 |
| CviJI | RGCY | 5 cut(s) | 40, 119, 334, 428, 639 |
| CviKI_1 | RGCY | 5 cut(s) | 40, 119, 334, 428, 639 |
| CviQI | GTAC | 2 cut(s) | 412, 434 |
| DdeI | CTNAG | 1 cut(s) | 276 |
| DpnI | GATC | 1 cut(s) | 266 |
| DpnII | GATC | 1 cut(s) | 264 |
| DraI | TTTAAA | 1 cut(s) | 36 |
| Eam1104I | CTCTTC | 1 cut(s) | 45 |
| EarI | CTCTTC | 1 cut(s) | 45 |
| Eco130I | CCWWGG | 1 cut(s) | 482 |
| Eco31I | GGTCTC | 1 cut(s) | 450 |
| EcoRI | GAATTC | 2 cut(s) | 100, 738 |
| EcoRII | CCWGG | 2 cut(s) | 373, 616 |
| EcoT14I | CCWWGG | 1 cut(s) | 482 |
| EcoT22I | ATGCAT | 1 cut(s) | 78 |
| ErhI | CCWWGG | 1 cut(s) | 482 |
| FaeI | CATG | 2 cut(s) | 592, 838 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 345, 377 |
| FaqI | GGGAC | 1 cut(s) | 325 |
| FatI | CATG | 2 cut(s) | 588, 834 |
| FauI | CCCGC | 1 cut(s) | 652 |
| Fnu4HI | GCNGC | 4 cut(s) | 381, 395, 600, 855 |
| FokI | GGATG | 3 cut(s) | 295, 550, 955 |
| Fsp4HI | GCNGC | 4 cut(s) | 381, 395, 600, 855 |
| FspBI | CTAG | 2 cut(s) | 441, 734 |
| GluI | GCNGC | 4 cut(s) | 381, 395, 600, 855 |
| GsuI | CTGGAG | 1 cut(s) | 639 |
| HapII | CCGG | 2 cut(s) | 636, 772 |
| Hin1II | CATG | 2 cut(s) | 592, 838 |
| HincII | GTYRAC | 1 cut(s) | 19 |
| HindII | GTYRAC | 1 cut(s) | 19 |
| HinfI | GANTC | 2 cut(s) | 502, 895 |
| HpaII | CCGG | 2 cut(s) | 636, 772 |
| HphI | GGTGA | 1 cut(s) | 476 |
| Hpy166II | GTNNAC | 4 cut(s) | 13, 19, 401, 878 |
| Hpy188I | TCNGA | 1 cut(s) | 688 |
| Hpy188III | TCNNGA | 4 cut(s) | 170, 236, 449, 772 |
| Hpy8I | GTNNAC | 4 cut(s) | 13, 19, 401, 878 |
| HpyAV | CCTTC | 3 cut(s) | 195, 447, 869 |
| HpyCH4III | ACNGT | 4 cut(s) | 291, 464, 509, 565 |
| HpyCH4IV | ACGT | 6 cut(s) | 15, 472, 728, 746, 751, 1039 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 104, 394, 403, 851 |
| HpyF3I | CTNAG | 1 cut(s) | 276 |
| HpySE526I | ACGT | 6 cut(s) | 15, 472, 728, 746, 751, 1039 |
| Hsp92II | CATG | 2 cut(s) | 592, 838 |
| Kpn2I | TCCGGA | 1 cut(s) | 771 |
| Kzo9I | GATC | 1 cut(s) | 264 |
| LpnPI | CCDG | 8 cut(s) | 183, 360, 387, 603, 630, 649, 785, 936 |
| Lsp1109I | GCAGC | 4 cut(s) | 392, 406, 586, 841 |
| LweI | GCATC | 3 cut(s) | 85, 679, 933 |
| MaeI | CTAG | 2 cut(s) | 441, 734 |
| MaeII | ACGT | 6 cut(s) | 15, 472, 728, 746, 751, 1039 |
| MaeIII | GTNAC | 4 cut(s) | 503, 747, 752, 925 |
| MalI | GATC | 1 cut(s) | 266 |
| MboI | GATC | 1 cut(s) | 264 |
| MboII | GAAGA | 5 cut(s) | 16, 62, 103, 699, 773 |
| MflI | RGATCY | 1 cut(s) | 264 |
| MhlI | GDGCHC | 1 cut(s) | 577 |
| MluCI | AATT | 9 cut(s) | 100, 612, 662, 738, 798, 864, 947, 960, 966 |
| MlyI | GAGTC | 1 cut(s) | 511 |
| MmeI | TCCRAC | 1 cut(s) | 923 |
| MnlI | CCTC | 5 cut(s) | 271, 450, 517, 614, 965 |
| Mph1103I | ATGCAT | 1 cut(s) | 78 |
| MroI | TCCGGA | 1 cut(s) | 771 |
| MseI | TTAA | 4 cut(s) | 35, 56, 363, 1023 |
| MslI | CAYNNNNRTG | 1 cut(s) | 791 |
| MspI | CCGG | 2 cut(s) | 636, 772 |
| MspR9I | CCNGG | 2 cut(s) | 375, 618 |
| Mva1269I | GAATGC | 1 cut(s) | 647 |
| MvaI | CCWGG | 2 cut(s) | 375, 618 |
| MvnI | CGCG | 1 cut(s) | 44 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 104, 394, 403, 851 |
| NdeII | GATC | 1 cut(s) | 264 |
| NlaIII | CATG | 2 cut(s) | 592, 838 |
| NmuCI | GTSAC | 3 cut(s) | 503, 747, 925 |
| NsiI | ATGCAT | 1 cut(s) | 78 |
| NspV | TTCGAA | 1 cut(s) | 114 |
| PctI | GAATGC | 1 cut(s) | 647 |
| PfeI | GAWTC | 1 cut(s) | 895 |
| PfoI | TCCNGGA | 1 cut(s) | 616 |
| PkrI | GCNGC | 4 cut(s) | 382, 396, 601, 856 |
| PleI | GAGTC | 1 cut(s) | 510 |
| PpsI | GAGTC | 1 cut(s) | 510 |
| PsiI | TTATAA | 1 cut(s) | 249 |
| Psp1406I | AACGTT | 2 cut(s) | 472, 1039 |
| Psp6I | CCWGG | 2 cut(s) | 373, 616 |
| PspGI | CCWGG | 2 cut(s) | 373, 616 |
| PsuI | RGATCY | 1 cut(s) | 264 |
| RsaI | GTAC | 2 cut(s) | 413, 435 |
| RsaNI | GTAC | 2 cut(s) | 412, 434 |
| RseI | CAYNNNNRTG | 1 cut(s) | 791 |
| SaqAI | TTAA | 4 cut(s) | 35, 56, 363, 1023 |
| SatI | GCNGC | 4 cut(s) | 381, 395, 600, 855 |
| Sau3AI | GATC | 1 cut(s) | 264 |
| SchI | GAGTC | 1 cut(s) | 511 |
| ScrFI | CCNGG | 2 cut(s) | 375, 618 |
| SduI | GDGCHC | 1 cut(s) | 577 |
| SfaNI | GCATC | 3 cut(s) | 85, 679, 933 |
| SfuI | TTCGAA | 1 cut(s) | 114 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 791 |
| SmlI | CTYRAG | 1 cut(s) | 449 |
| SmoI | CTYRAG | 1 cut(s) | 449 |
| Sse9I | AATT | 9 cut(s) | 100, 612, 662, 738, 798, 864, 947, 960, 966 |
| SsiI | CCGC | 1 cut(s) | 645 |
| SspI | AATATT | 2 cut(s) | 996, 1020 |
| SspMI | CTAG | 2 cut(s) | 441, 734 |
| StyD4I | CCNGG | 2 cut(s) | 373, 616 |
| StyI | CCWWGG | 1 cut(s) | 482 |
| TaaI | ACNGT | 4 cut(s) | 291, 464, 509, 565 |
| TaiI | ACGT | 6 cut(s) | 18, 475, 731, 749, 754, 1042 |
| TaqI | TCGA | 4 cut(s) | 114, 225, 297, 654 |
| TasI | AATT | 9 cut(s) | 100, 612, 662, 738, 798, 864, 947, 960, 966 |
| TfiI | GAWTC | 1 cut(s) | 895 |
| Tru1I | TTAA | 4 cut(s) | 35, 56, 363, 1023 |
| Tru9I | TTAA | 4 cut(s) | 35, 56, 363, 1023 |
| TscAI | CASTG | 2 cut(s) | 514, 568 |
| TseFI | GTSAC | 3 cut(s) | 503, 747, 925 |
| TseI | GCWGC | 4 cut(s) | 380, 394, 599, 854 |
| Tsp45I | GTSAC | 3 cut(s) | 503, 747, 925 |
| TspDTI | ATGAA | 5 cut(s) | 17, 483, 554, 640, 672 |
| TspRI | CASTG | 2 cut(s) | 514, 568 |
| XapI | RAATTY | 2 cut(s) | 100, 738 |
| XspI | CTAG | 2 cut(s) | 441, 734 |
| Zsp2I | ATGCAT | 1 cut(s) | 78 |