Rh7CG377000

Domain of unknown function

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
47451940 .. 47461986
10047 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG377000.1

Sequence Viewer

Length: 1611 bp
ATGTCACTATGCTTCGAATGCTTTGGCCCCCTCTCTGATTGCTGCAGAAGCTTTGGCTCTACAACTGACGAGAATTCTGAAGATGACTTGGATTACGACACCTGCTCAAGTGATGGTGATGCTGACTCGGAAATAGAAGCGGTTCAAGTATATGAGAAAGATGGACCTTTCTTCAGACCAAAAATGACTAAATATCTTTATTCGGTTACTCCACTTGAAAAGCTAAGGAGTAAGGACCGCGCTGAACTAATTTCTACGGGTTTGAGAGTAAGACGTTTAGATATTTCGTTGGACTTACTACAACGCTTTCCAAGCTTGGGCATTGCTAAAGACCATTCCAGTGGATCCCCTTTAAATGAATTGGCTAGTACGCGTGCGGGATTATTCTCAAATTCAAGCCATCTCAAAATATGGGAACGATGGATTTATAACCGTATACACATACCACCTGCACCAAAATATACCCGTGAAGTTTGTATAGATGTTCAGAATGAAGAGGAAGATCAAGGCAATCGGAAGCAACTCCTTCGGAAAGTTACATGTTTCTTTGGAAGACTGGTTGCCAATCTCTATCACCTCTCTGGAATCAATGGTCTATATCAAATGAAATTGCTCCATGTCCGGACCATCGAAATTCTAGAGCACATGTGTGTAGTGTTAAGAAGGGAAGAGAATCTCAACTATATGCAAAGTAAATTTTTCCAAAAAGCACTCTTCCAAGCAGTAGAACGAGGACATCTTACGTTCATTGCATACATGCGTAGACATGATTTCCGAAGGTTCCTTGATATCACTAATGAATATGGCAAGACCGTATTTCAATTTGCTGCTGAGCATCGTCAAGACAAAATCTTTAGTATAATACTTACGTTTGTGAAAGAAAGGAGAGAAGAAATTGTAGGCAAGAAAGATGAGTTTGGGAATAACATGCTGCACGTGGTAGGAAAGTTGTCCCCATCAACACATATTGTTCATATTCGAGGTGCAGCTTTTCAAATGCAGAATGAACTACAATGGTTCAAGAAGGTGGAGCGCATGGCAAATCTCAAGGATATTAATTGTGTAAATTCTGATGGTTTGACACCACAAGAGGTATTTACTGTGAACCACAGAGATTTGGTGAAGGCAGGAGAATTGGCAATGAAAGAAACTGCAACTTCTTCTTCGGCACTTGTAGCTGCTCTTATCATTACCATTATGTTCGCTGCAGCAGTGACAGTTCCTGGTGGACTTAATGGGGACACAGGTATTCCCATATACTTACACACTAAGGCATTTAGGATTTTTATAGTTGCAGACGTTATATCGCTCTGCTCTTCCACAACTTCAGTAATGGTGTTTTTGGGGATCCTCACATCACGTTTTGCAGAAGAAGATTTCCTCACATCCTTACCCAAAAAATTGATAATTGGCTTTTTGACCCTTTTTTTATCTATTGGGGCCATGATGATTGCATTTTCTTCTGCCATTTTCATTATGCTTCCGGAAAAACCATCTATTGTTATTCCATCTATCGTACTCGCTAGTGTTCCAATTGCCTCATTCCTATGGATGCAACTTCCGTTCCTTATTGAGATCATTATTTCTACTTACGGATTCAGATATTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

536

Amino Acids

60.86

Weight (kDa)

7.21

Isoelectric Point (pI)

42.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PGG PF13962 383 - 492 7.1e-23 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000027)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18670 AT3G18670 AT3G54065
fragaria_vesca FvH4_1g26570 FvH4_1g26570 FvH4_5g19270 FvH4_5g19273 FvH4_5g35840 FvH4_5g36340 FvH4_5g36630 FvH4_5g37181 FvH4_5g37182 FvH4_5g37185 FvH4_5g37240 FvH4_5g37260 FvH4_6g21440 FvH4_6g44571 FvH4_6g44572 FvH4_6g44610 FvH4_6g44620 FvH4_6g44650 FvH4_6g44660 FvH4_6g45151 FvH4_6g45152 FvH4_6g45152 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45154 FvH4_6g51440 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090
malus_domestica MD00G1010300.v1.1 MD00G1010400.v1.1 MD00G1010500.v1.1 MD00G1011000.v1.1 MD00G1011200.v1.1 MD00G1011500.v1.1 MD00G1011900.v1.1 MD03G1133900.v1.1 MD03G1134100.v1.1 MD09G1086300.v1.1 MD09G1086500.v1.1 MD09G1086900.v1.1 MD09G1087000.v1.1 MD09G1088000.v1.1 MD09G1088100.v1.1 MD09G1088200.v1.1 MD09G1088300.v1.1 MD09G1089000.v1.1 MD09G1089300.v1.1 MD09G1133800.v1.1 MD16G1219400.v1.1 MD17G1027900.v1.1 MD17G1028400.v1.1 MD17G1028600.v1.1 MD17G1028700.v1.1 MD17G1028900.v1.1 MD17G1029000.v1.1 MD17G1029100.v1.1 MD17G1029200.v1.1 MD17G1075400.v1.1 MD17G1076000.v1.1 MD17G1077000.v1.1 MD17G1077100.v1.1 MD17G1077800.v1.1 MD17G1078000.v1.1 MD17G1078100.v1.1 MD17G1078300.v1.1 MD17G1100900.v1.1 MD17G1101100.v1.1 MD17G1101400.v1.1 MD17G1104200.v1.1 MD17G1104500.v1.1 MD17G1121300.v1.1 MD17G1121600.v1.1 MD17G1121900.v1.1 MD17G1122700.v1.1 MD17G1218800.v1.1
prunus_persica Prupe.2G033800_v2.0.a1 Prupe.2G033900_v2.0.a1 Prupe.2G080300_v2.0.a1 Prupe.2G080700_v2.0.a1 Prupe.2G080900_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G082000_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082200_v2.0.a1 Prupe.2G082300_v2.0.a1 Prupe.2G082700_v2.0.a1 Prupe.2G082800_v2.0.a1 Prupe.2G082900_v2.0.a1 Prupe.3G235600_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236800_v2.0.a1 Prupe.3G237000_v2.0.a1 Prupe.3G237100_v2.0.a1 Prupe.3G237300_v2.0.a1 Prupe.3G237400_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.4G282500_v2.0.a1 Prupe.4G282500_v2.0.a1
pyrus_communis pycom03g08990 pycom03g09000 pycom09g01180 pycom09g01190 pycom09g01220 pycom09g01230 pycom09g01360 pycom09g01370 pycom09g01380 pycom09g01410 pycom09g05500 pycom11g10280 pycom11g10290 pycom11g10310 pycom16g18270 pycom16g18280 pycom17g02280 pycom17g02290 pycom17g02300 pycom17g02360 pycom17g02390 pycom17g02410 pycom17g02440 pycom17g02460 pycom17g02470 pycom17g02480 pycom17g02510 pycom17g02530 pycom17g02540 pycom17g02550 pycom17g02560 pycom17g02570 pycom17g02580 pycom17g02630 pycom17g02640 pycom17g04970 pycom17g04980 pycom17g05010 pycom17g07090 pycom17g07620 pycom17g07630 pycom17g07640 pycom17g07650 pycom17g07660 pycom17g07740 pycom17g07760 pycom17g07770 pycom17g09580 pycom17g11170 pycom17g11200 pycom17g11220 pycom17g11240 pycom17g11250 pycom17g11300 pycom17g11340 pycom17g11380 pycom17g11440
rosa_chinensis RchiOBHm_Chr1g0332901 RchiOBHm_Chr1g0338981 RchiOBHm_Chr1g0338991 RchiOBHm_Chr1g0341201 RchiOBHm_Chr1g0341211 RchiOBHm_Chr1g0342721 RchiOBHm_Chr1g0343191 RchiOBHm_Chr2g0146761 RchiOBHm_Chr2g0161791 RchiOBHm_Chr2g0161801 RchiOBHm_Chr2g0161841 RchiOBHm_Chr2g0162041 RchiOBHm_Chr2g0162651 RchiOBHm_Chr2g0162691 RchiOBHm_Chr2g0162701 RchiOBHm_Chr2g0162711 RchiOBHm_Chr2g0162721 RchiOBHm_Chr2g0162811 RchiOBHm_Chr2g0162831 RchiOBHm_Chr2g0162841 RchiOBHm_Chr4g0416381 RchiOBHm_Chr4g0416391 RchiOBHm_Chr5g0075981 RchiOBHm_Chr6g0276101 RchiOBHm_Chr7g0214581 RchiOBHm_Chr7g0214631 RchiOBHm_Chr7g0214651 RchiOBHm_Chr7g0214721 RchiOBHm_Chr7g0223161 RchiOBHm_Chr7g0230661 RchiOBHm_Chr7g0230751 RchiOBHm_Chr7g0230781 RchiOBHm_Chr7g0234581 RchiOBHm_Chr7g0234601 RchiOBHm_Chr7g0237561 RchiOBHm_Chr7g0237571 RchiOBHm_Chr7g0238781 RchiOBHm_Chr7g0238811 RchiOBHm_Chr7g0242161 RchiOBHm_Chr7g0242401 RchiOBHm_Chr7g0242451 RchiOBHm_Chr7g0242921 RchiOBHm_Chr7g0242981 RchiOBHm_Chr7g0243111 RchiOBHm_Chr7g0243251 RchiOBHm_Chr7g0243331
rosa_laevigata RLG00000000803 RLG00000000807 RLG00000000809 RLG00000000811 RLG00000000814 RLG00000000854 RLG00000000859 RLG00000000864 RLG00000000994 RLG00000000995 RLG00000001458 RLG00000001461 RLG00000001474 RLG00000001476 RLG00000002729 RLG00000002730 RLG00000003505 RLG00000008871 RLG00000008873 RLG00000018513 RLG00000021300 RLG00000021303 RLG00000021318 RLG00000021356 RLG00000021357 RLG00000029070 RLG00000029071 RLG00000029171 RLG00000029189 RLG00000029190 RLG00000029640 RLG00000034635
rosa_multiflora Rmu_co8149086.1_g000001 Rmu_co8460577.1_g000001 Rmu_sc0000429.1_g000062 Rmu_sc0000429.1_g000071 Rmu_sc0000429.1_g000081 Rmu_sc0000863.1_g000020 Rmu_sc0001488.1_g000011 Rmu_sc0001545.1_g000007 Rmu_sc0001849.1_g000068 Rmu_sc0001993.1_g000003 Rmu_sc0002222.1_g000002 Rmu_sc0002308.1_g000053 Rmu_sc0002308.1_g000069 Rmu_sc0002480.1_g000007 Rmu_sc0003179.1_g000041 Rmu_sc0004213.1_g000011 Rmu_sc0007101.1_g000012 Rmu_sc0008565.1_g000011 Rmu_sc0009298.1_g000003 Rmu_sc0010407.1_g000009 Rmu_sc0010407.1_g000013 Rmu_sc0026966.1_g000004 Rmu_ssc0000152.1_g000012 Rmu_ssc0000152.1_g000014 Rmu_ssc0000295.1_g000021 Rmu_ssc0000295.1_g000026
rosa_roxburghii Rroxscaffold_1G00029600 Rroxscaffold_2G00087790 Rroxscaffold_2G00087800 Rroxscaffold_2G00088360 Rroxscaffold_2G00088500 Rroxscaffold_2G00088530 Rroxscaffold_2G00088590 Rroxscaffold_3G00221570 Rroxscaffold_3G00222190 Rroxscaffold_3G00222240 Rroxscaffold_3G00222880 Rroxscaffold_3G00222900 Rroxscaffold_3G00223990 Rroxscaffold_3G00229750 Rroxscaffold_3G00229760 Rroxscaffold_3G00245140 Rroxscaffold_3G00245150 Rroxscaffold_3G00245200 Rroxscaffold_3G00253520 Rroxscaffold_3G00253530 Rroxscaffold_4G00294500 Rroxscaffold_4G00311800 Rroxscaffold_4G00311830 Rroxscaffold_4G00311850 Rroxscaffold_4G00313180 Rroxscaffold_4G00313210 Rroxscaffold_4G00316270 Rroxscaffold_4G00317910 Rroxscaffold_4G00317920 Rroxscaffold_5G00349290 Rroxscaffold_5G00349300 Rroxscaffold_5G00349310 Rroxscaffold_5G00351950 Rroxscaffold_5G00351960 Rroxscaffold_5G00353390 Rroxscaffold_7G00192540
rosa_rugosa Rorug01G0102500 Rorug01G0102600 Rorug01G0146400.1 Rorug01G0146500.1 Rorug01G0159400.1 Rorug01G0159500.1 Rorug02G0491900 Rorug02G0492000 Rorug02G0492100 Rorug02G0492200 Rorug02G0492300 Rorug02G0492400 Rorug02G0492500 Rorug02G0492700 Rorug02G0498500 Rorug02G0498600 Rorug02G0498800 Rorug04G0006900 Rorug04G0053700 Rorug06G0002000 Rorug06G0002100 Rorug07G0304700 Rorug07G0304800 Rorug07G0304800 Rorug07G0304800 Rorug07G0305300 Rorug07G0305400 Rorug07G0305500 Rorug07G0305500 Rorug07G0318300 Rorug07G0318600 Rorug07G0323600
rosa_samantha Rh1AG128900 Rh1AG162500 Rh1AG163000 Rh1AG164000 Rh1AG164700 Rh1AG173200 Rh1AG173300 Rh1AG173800 Rh1BG098100 Rh1BG129800 Rh1BG130600 Rh1BG141300 Rh1BG141500 Rh1BG141600 Rh1CG122700 Rh1CG151900 Rh1CG152400 Rh1CG153100 Rh1CG153500 Rh1CG161400 Rh1CG161600 Rh1DG134200 Rh1DG173500 Rh1DG173700 Rh2AG558100 Rh2AG558500 Rh2AG560200 Rh2AG564700 Rh2AG564800 Rh2BG465600 Rh2BG571700 Rh2BG572000 Rh2BG573500 Rh2CG439800 Rh2CG541800 Rh2CG542100 Rh2CG542200 Rh2CG543800 Rh2CG547300 Rh2DG474700 Rh2DG580600 Rh2DG580900 Rh2DG581200 Rh2DG581700 Rh2DG581800 Rh2DG583500 Rh2DG587200 Rh2DG587300 Rh2DG587400 Rh4AG128900 Rh4AG203800 Rh4AG319900 Rh4AG320000 Rh4BG122200 Rh4BG201100 Rh4CG136000 Rh4DG122400 Rh4DG201100 Rh4DG323600 Rh6BG077000 Rh6DG206200 Rh7AG282300 Rh7AG282500 Rh7AG283400 Rh7AG358600 Rh7AG414500 Rh7AG415200 Rh7AG415500 Rh7AG461700 Rh7AG469300 Rh7AG477800 Rh7BG273900 Rh7BG274000 Rh7BG390400 Rh7BG390500 Rh7BG391500 Rh7BG391800 Rh7BG408300 Rh7BG432000 Rh7BG439200 Rh7BG449200 Rh7BG449900 Rh7BG450400 Rh7BG450500 Rh7CG220900 Rh7CG301600 Rh7CG302700 Rh7CG377000 Rh7CG433900 Rh7CG434200 Rh7CG478800 Rh7DG286200 Rh7DG354000 Rh7DG424600 Rh7DG448000 Rh7DG462800 Rh7DG462900
rosa_wichuraiana Rw0G003440 Rw0G011970 Rw0G017120 Rw0G017130 Rw0G017140 Rw0G018470 Rw0G018480 Rw0G020440 Rw1G010470 Rw2G046180 Rw2G046210 Rw2G046230 Rw2G046390 Rw2G046400 Rw2G046710 Rw2G046720 Rw2G046730 Rw3G025310 Rw4G010410 Rw4G017250 Rw6G018270 Rw7G018180 Rw7G024130 Rw7G024160 Rw7G024170 Rw7G034060 Rw7G034250 Rw7G034260 Rw7G034400 Rw7G034410 Rw7G038210 Rw7G039020 Rw7G039060 Rw7G039280 Rw7G039400 Rw7G039470 Rw7G039880 Rw7G039890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 429
AarI CACCTGC 2 cut(s) 110, 457
Acc36I ACCTGC 2 cut(s) 110, 457
AccI GTMKAC 2 cut(s) 436, 763
AccII CGCG 2 cut(s) 240, 373
AccIII TCCGGA 2 cut(s) 621, 1483
AciI CCGC 3 cut(s) 140, 238, 377
AclWI GGATC 4 cut(s) 339, 352, 1342, 1355
AcsI RAATTY 5 cut(s) 73, 391, 633, 695, 1066
AcuI CTGAAG 3 cut(s) 99, 157, 1311
AcvI CACGTG 1 cut(s) 937
AfaI GTAC 2 cut(s) 370, 1518
AfiI CCNNNNNNNGG 1 cut(s) 317
AflIII ACRYGT 3 cut(s) 371, 539, 645
AgsI TTSAA 6 cut(s) 146, 218, 396, 821, 995, 1021
AjnI CCWGG 1 cut(s) 1222
AleI CACNNNNGTG 1 cut(s) 648
AluBI AGCT 5 cut(s) 51, 223, 315, 989, 1178
AluI AGCT 5 cut(s) 51, 223, 315, 989, 1178
Alw21I GWGCWC 1 cut(s) 645
AlwI GGATC 4 cut(s) 339, 352, 1342, 1355
AlwNI CAGNNNCTG 1 cut(s) 1223
Aor13HI TCCGGA 2 cut(s) 621, 1483
AoxI GGCC 2 cut(s) 25, 1440
ApeKI GCWGC 7 cut(s) 42, 827, 931, 986, 1178, 1205, 1208
ApoI RAATTY 5 cut(s) 73, 391, 633, 695, 1066
AseI ATTAAT 1 cut(s) 1056
Asp700I GAANNNNTTC 1 cut(s) 141
AspLEI GCGC 2 cut(s) 242, 1035
AspS9I GGNCC 5 cut(s) 26, 164, 235, 624, 1440
AsuHPI GGTGA 3 cut(s) 128, 566, 1132
AsuII TTCGAA 1 cut(s) 15
AvaII GGWCC 3 cut(s) 164, 235, 624
BamHI GGATCC 2 cut(s) 344, 1347
BbrPI CACGTG 1 cut(s) 937
BbsI GAAGAC 1 cut(s) 559
Bbv12I GWGCWC 1 cut(s) 645
BbvI GCAGC 7 cut(s) 29, 814, 918, 998, 1165, 1192, 1220
BccI CCATC 9 cut(s) 107, 155, 408, 414, 635, 964, 1067, 1501, 1516
BcgI CGANNNNNNTGC 2 cut(s) 509, 543
BciT130I CCWGG 1 cut(s) 1224
BfaI CTAG 3 cut(s) 366, 638, 1524
BfmI CTRYAG 2 cut(s) 43, 1206
BfuAI ACCTGC 2 cut(s) 110, 457
BisI GCNGC 7 cut(s) 43, 828, 932, 987, 1179, 1206, 1209
BlpI GCTNAGC 1 cut(s) 831
BlsI GCNGC 7 cut(s) 44, 829, 933, 988, 1180, 1207, 1210
Bme1390I CCNGG 1 cut(s) 1224
Bme18I GGWCC 3 cut(s) 164, 235, 624
BmgT120I GGNCC 5 cut(s) 26, 164, 235, 624, 1440
BmiI GGNNCC 5 cut(s) 28, 346, 782, 1349, 1441
BmrFI CCNGG 1 cut(s) 1224
BmsI GCATC 3 cut(s) 109, 844, 1542
BpiI GAAGAC 1 cut(s) 559
Bpu10I CCTNAGC 1 cut(s) 224
Bpu1102I GCTNAGC 1 cut(s) 831
Bpu14I TTCGAA 1 cut(s) 15
BpuEI CTTGAG 2 cut(s) 91, 1031
BsaAI YACGTR 1 cut(s) 937
BsaWI WCCGGW 2 cut(s) 621, 1483
Bsc4I CCNNNNNNNGG 1 cut(s) 317
Bse1I ACTGG 2 cut(s) 339, 561
Bse3DI GCAATG 3 cut(s) 321, 747, 1146
BseAI TCCGGA 2 cut(s) 621, 1483
BseBI CCWGG 1 cut(s) 1224
BseGI GGATG 2 cut(s) 1385, 1557
BseLI CCNNNNNNNGG 1 cut(s) 317
BseMI GCAATG 3 cut(s) 321, 747, 1146
BseMII CTCAG 1 cut(s) 822
BseNI ACTGG 2 cut(s) 339, 561
BseXI GCAGC 7 cut(s) 29, 814, 918, 998, 1165, 1192, 1220
BsgI GTGCAG 3 cut(s) 435, 917, 1005
Bsh1236I CGCG 2 cut(s) 240, 373
BshFI GGCC 2 cut(s) 27, 1442
BsiHKAI GWGCWC 1 cut(s) 645
BsiSI CCGG 2 cut(s) 622, 1484
BslFI GGGAC 2 cut(s) 937, 1253
BslI CCNNNNNNNGG 1 cut(s) 317
BsmFI GGGAC 2 cut(s) 937, 1253
BsmI GAATGC 1 cut(s) 23
BsnI GGCC 2 cut(s) 27, 1442
Bsp119I TTCGAA 1 cut(s) 15
Bsp1286I GDGCHC 1 cut(s) 645
Bsp13I TCCGGA 2 cut(s) 621, 1483
Bsp143I GATC 4 cut(s) 344, 502, 1347, 1575
Bsp1720I GCTNAGC 1 cut(s) 831
BspACI CCGC 3 cut(s) 140, 238, 377
BspANI GGCC 2 cut(s) 27, 1442
BspCNI CTCAG 1 cut(s) 823
BspEI TCCGGA 2 cut(s) 621, 1483
BspFNI CGCG 2 cut(s) 240, 373
BspLI GGNNCC 5 cut(s) 28, 346, 782, 1349, 1441
BspMAI CTGCAG 2 cut(s) 47, 1210
BspMI ACCTGC 2 cut(s) 110, 457
BspPI GGATC 4 cut(s) 339, 352, 1342, 1355
BspQI GCTCTTC 1 cut(s) 1321
BspT104I TTCGAA 1 cut(s) 15
BsrDI GCAATG 3 cut(s) 321, 747, 1146
BsrI ACTGG 2 cut(s) 339, 561
BssMI GATC 4 cut(s) 344, 502, 1347, 1575
BssNAI GTATAC 1 cut(s) 437
Bst1107I GTATAC 1 cut(s) 437
Bst2UI CCWGG 1 cut(s) 1224
Bst4CI ACNGT 4 cut(s) 434, 814, 1102, 1219
Bst6I CTCTTC 4 cut(s) 489, 663, 719, 1321
BstBAI YACGTR 1 cut(s) 937
BstBI TTCGAA 1 cut(s) 15
BstC8I GCNNGC 1 cut(s) 375
BstDEI CTNAG 3 cut(s) 224, 831, 1269
BstF5I GGATG 2 cut(s) 1385, 1557
BstFNI CGCG 2 cut(s) 240, 373
BstHHI GCGC 2 cut(s) 242, 1035
BstKTI GATC 4 cut(s) 347, 505, 1350, 1578
BstMBI GATC 4 cut(s) 344, 502, 1347, 1575
BstMWI GCNNNNNNNGC 4 cut(s) 18, 48, 312, 1175
BstNI CCWGG 1 cut(s) 1224
BstNSI RCATGY 4 cut(s) 543, 649, 760, 931
BstSCI CCNGG 1 cut(s) 1222
BstSFI CTRYAG 2 cut(s) 43, 1206
BstUI CGCG 2 cut(s) 240, 373
BstV1I GCAGC 7 cut(s) 29, 814, 918, 998, 1165, 1192, 1220
BstV2I GAAGAC 1 cut(s) 559
BstX2I RGATCY 2 cut(s) 344, 1347
BstXI CCANNNNNNTGG 1 cut(s) 341
BstYI RGATCY 2 cut(s) 344, 1347
BstZ17I GTATAC 1 cut(s) 437
BsuRI GGCC 2 cut(s) 27, 1442
BtsCI GGATG 2 cut(s) 1385, 1557
BtsI GCAGTG 1 cut(s) 1218
BtsIMutI CAGTG 2 cut(s) 346, 1218
BveI ACCTGC 2 cut(s) 110, 457
Cac8I GCNNGC 1 cut(s) 375
CaiI CAGNNNCTG 1 cut(s) 1223
CfoI GCGC 2 cut(s) 242, 1035
Cfr13I GGNCC 5 cut(s) 26, 164, 235, 624, 1440
Csp6I GTAC 2 cut(s) 369, 1517
CviAII CATG 8 cut(s) 540, 617, 646, 757, 767, 928, 1036, 1444
CviQI GTAC 2 cut(s) 369, 1517
DdeI CTNAG 3 cut(s) 224, 831, 1269
DpnI GATC 4 cut(s) 346, 504, 1349, 1577
DpnII GATC 4 cut(s) 344, 502, 1347, 1575
DraI TTTAAA 1 cut(s) 354
Eam1104I CTCTTC 4 cut(s) 489, 663, 719, 1321
EarI CTCTTC 4 cut(s) 489, 663, 719, 1321
Eco32I GATATC 1 cut(s) 790
Eco47I GGWCC 3 cut(s) 164, 235, 624
Eco57I CTGAAG 3 cut(s) 99, 157, 1311
Eco72I CACGTG 1 cut(s) 937
EcoRI GAATTC 1 cut(s) 73
EcoRII CCWGG 1 cut(s) 1222
EcoRV GATATC 1 cut(s) 790
FaeI CATG 8 cut(s) 543, 620, 649, 760, 770, 931, 1039, 1447
FaqI GGGAC 2 cut(s) 937, 1253
FatI CATG 8 cut(s) 539, 616, 645, 756, 766, 927, 1035, 1443
FauI CCCGC 1 cut(s) 370
FblI GTMKAC 2 cut(s) 436, 763
Fnu4HI GCNGC 7 cut(s) 43, 828, 932, 987, 1179, 1206, 1209
FokI GGATG 2 cut(s) 1372, 1564
Fsp4HI GCNGC 7 cut(s) 43, 828, 932, 987, 1179, 1206, 1209
FspBI CTAG 3 cut(s) 366, 638, 1524
GlaI GCGC 2 cut(s) 241, 1034
GluI GCNGC 7 cut(s) 43, 828, 932, 987, 1179, 1206, 1209
HaeIII GGCC 2 cut(s) 27, 1442
HapII CCGG 2 cut(s) 622, 1484
HhaI GCGC 2 cut(s) 242, 1035
Hin1II CATG 8 cut(s) 543, 620, 649, 760, 770, 931, 1039, 1447
Hin6I GCGC 2 cut(s) 240, 1033
HinP1I GCGC 2 cut(s) 240, 1033
HindIII AAGCTT 2 cut(s) 49, 313
HinfI GANTC 4 cut(s) 125, 585, 673, 1596
HpaII CCGG 2 cut(s) 622, 1484
HphI GGTGA 3 cut(s) 128, 566, 1132
Hpy166II GTNNAC 4 cut(s) 437, 764, 1105, 1229
Hpy188III TCNNGA 6 cut(s) 582, 622, 638, 842, 1021, 1484
Hpy8I GTNNAC 4 cut(s) 437, 764, 1105, 1229
HpyAV CCTTC 5 cut(s) 536, 657, 771, 1018, 1117
HpyCH4III ACNGT 4 cut(s) 434, 814, 1102, 1219
HpyCH4IV ACGT 6 cut(s) 274, 743, 869, 936, 1299, 1360
HpyF10VI GCNNNNNNNGC 4 cut(s) 18, 48, 312, 1175
HpyF3I CTNAG 3 cut(s) 224, 831, 1269
HpySE526I ACGT 6 cut(s) 274, 743, 869, 936, 1299, 1360
Hsp92II CATG 8 cut(s) 543, 620, 649, 760, 770, 931, 1039, 1447
HspAI GCGC 2 cut(s) 240, 1033
Kpn2I TCCGGA 2 cut(s) 621, 1483
Kzo9I GATC 4 cut(s) 344, 502, 1347, 1575
LguI GCTCTTC 1 cut(s) 1321
LmnI GCTCC 2 cut(s) 618, 1030
Lsp1109I GCAGC 7 cut(s) 29, 814, 918, 998, 1165, 1192, 1220
LweI GCATC 3 cut(s) 109, 844, 1542
MaeI CTAG 3 cut(s) 366, 638, 1524
MaeII ACGT 6 cut(s) 274, 743, 869, 936, 1299, 1360
MaeIII GTNAC 4 cut(s) 3, 205, 535, 1213
MalI GATC 4 cut(s) 346, 504, 1349, 1577
MboI GATC 4 cut(s) 344, 502, 1347, 1575
MfeI CAATTG 1 cut(s) 1533
MflI RGATCY 2 cut(s) 344, 1347
MhlI GDGCHC 1 cut(s) 645
MluI ACGCGT 1 cut(s) 371
MlyI GAGTC 1 cut(s) 119
MmeI TCCRAC 1 cut(s) 270
MnlI CCTC 9 cut(s) 41, 490, 587, 725, 974, 1084, 1361, 1391, 1549
MroI TCCGGA 2 cut(s) 621, 1483
MroXI GAANNNNTTC 1 cut(s) 141
MseI TTAA 4 cut(s) 353, 659, 1056, 1233
MslI CAYNNNNRTG 3 cut(s) 339, 648, 1546
MspI CCGG 2 cut(s) 622, 1484
MspR9I CCNGG 1 cut(s) 1224
MunI CAATTG 1 cut(s) 1533
Mva1269I GAATGC 1 cut(s) 23
MvaI CCWGG 1 cut(s) 1224
MvnI CGCG 2 cut(s) 240, 373
MwoI GCNNNNNNNGC 4 cut(s) 18, 48, 312, 1175
NdeII GATC 4 cut(s) 344, 502, 1347, 1575
NlaIII CATG 8 cut(s) 543, 620, 649, 760, 770, 931, 1039, 1447
NlaIV GGNNCC 5 cut(s) 28, 346, 782, 1349, 1441
NmuCI GTSAC 2 cut(s) 3, 1213
NspI RCATGY 4 cut(s) 543, 649, 760, 931
NspV TTCGAA 1 cut(s) 15
OliI CACNNNNGTG 1 cut(s) 648
PaqCI CACCTGC 2 cut(s) 110, 457
PciI ACATGT 2 cut(s) 539, 645
PciSI GCTCTTC 1 cut(s) 1321
PctI GAATGC 1 cut(s) 23
PdmI GAANNNNTTC 1 cut(s) 141
PfeI GAWTC 3 cut(s) 585, 673, 1596
PkrI GCNGC 7 cut(s) 44, 829, 933, 988, 1180, 1207, 1210
PleI GAGTC 1 cut(s) 119
PmaCI CACGTG 1 cut(s) 937
PmlI CACGTG 1 cut(s) 937
PpsI GAGTC 1 cut(s) 119
Ppu21I YACGTR 1 cut(s) 937
PscI ACATGT 2 cut(s) 539, 645
PshBI ATTAAT 1 cut(s) 1056
PsiI TTATAA 1 cut(s) 429
Psp6I CCWGG 1 cut(s) 1222
PspCI CACGTG 1 cut(s) 937
PspGI CCWGG 1 cut(s) 1222
PspN4I GGNNCC 5 cut(s) 28, 346, 782, 1349, 1441
PspPI GGNCC 5 cut(s) 26, 164, 235, 624, 1440
PstI CTGCAG 2 cut(s) 47, 1210
PstNI CAGNNNCTG 1 cut(s) 1223
PsuI RGATCY 2 cut(s) 344, 1347
RsaI GTAC 2 cut(s) 370, 1518
RsaNI GTAC 2 cut(s) 369, 1517
RseI CAYNNNNRTG 3 cut(s) 339, 648, 1546
SapI GCTCTTC 1 cut(s) 1321
SaqAI TTAA 4 cut(s) 353, 659, 1056, 1233
SatI GCNGC 7 cut(s) 43, 828, 932, 987, 1179, 1206, 1209
Sau3AI GATC 4 cut(s) 344, 502, 1347, 1575
Sau96I GGNCC 5 cut(s) 26, 164, 235, 624, 1440
SchI GAGTC 1 cut(s) 119
ScrFI CCNGG 1 cut(s) 1224
SduI GDGCHC 1 cut(s) 645
SfaNI GCATC 3 cut(s) 109, 844, 1542
SfcI CTRYAG 2 cut(s) 43, 1206
SfuI TTCGAA 1 cut(s) 15
SinI GGWCC 3 cut(s) 164, 235, 624
SmiMI CAYNNNNRTG 3 cut(s) 339, 648, 1546
SmlI CTYRAG 2 cut(s) 106, 1046
SmoI CTYRAG 2 cut(s) 106, 1046
SsiI CCGC 3 cut(s) 140, 238, 377
SspMI CTAG 3 cut(s) 366, 638, 1524
StyD4I CCNGG 1 cut(s) 1222
TaaI ACNGT 4 cut(s) 434, 814, 1102, 1219
TaiI ACGT 6 cut(s) 277, 746, 872, 939, 1302, 1363
TaqI TCGA 3 cut(s) 15, 630, 979
TfiI GAWTC 3 cut(s) 585, 673, 1596
Tru1I TTAA 4 cut(s) 353, 659, 1056, 1233
Tru9I TTAA 4 cut(s) 353, 659, 1056, 1233
TscAI CASTG 2 cut(s) 346, 1218
TseFI GTSAC 2 cut(s) 3, 1213
TseI GCWGC 7 cut(s) 42, 827, 931, 986, 1178, 1205, 1208
Tsp45I GTSAC 2 cut(s) 3, 1213
TspDTI ATGAA 9 cut(s) 372, 507, 620, 736, 813, 962, 1020, 1157, 1462
TspGWI ACGGA 2 cut(s) 1551, 1608
TspRI CASTG 2 cut(s) 346, 1218
VpaK11BI GGWCC 3 cut(s) 164, 235, 624
VspI ATTAAT 1 cut(s) 1056
XapI RAATTY 5 cut(s) 73, 391, 633, 695, 1066
XbaI TCTAGA 1 cut(s) 637
XceI RCATGY 4 cut(s) 543, 649, 760, 931
XmiI GTMKAC 2 cut(s) 436, 763
XmnI GAANNNNTTC 1 cut(s) 141
XspI CTAG 3 cut(s) 366, 638, 1524
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.