MD17G1100900.v1.1

Domain of unknown function (DUF4219)

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Reverse (-)
8556898 .. 8559741
2844 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1100900.v1.1.491

Sequence Viewer

Length: 756 bp
ATGACAGACACAGCTGTCCCAAGTTTAATTGTTCATAAACTTCTAAACCAAAATAACTATGAAGTTTGGAGTTTGCGAGTTAAAACCTACCTATTGGCAAAAGATCTTTGGGACATTGTGGAAGCCACCACTGAGCCTCCTAAACGAGAAGATGGTGAAGTTGAATATACAGCTTGGAGGAAGAGTAATGCCGAGGCTTTGCACTTCATCCGGATTTCTTGTGGGGAGGATACTTTCTCTTTTATTAGGGGCACCAGCACAGCCAAAGTTGCCTGGCATATTTTGGCAGAAAAGTTGAAGCCAGCTGAAGCATCCCAAGCCACAGGAACCGGGGATATATCCAACAATCACACAAATAACAACCCAAACATTGTTGAGATAGAGCCAGAGAATGATGCCATAGAAGAATCGCTCGATGAAGGACACGAAGACAACCACGTTAATCAAGCTATTATGCATTTCGTGATGAGGGGTGATTGGGATGCTGCAATGGAGCTTCTTAAGCGACATCCCAAGGCAGTAACTGCAAGAATTAGGGAAGGTGGGACAATTCTTCACTGGGCATTCTTTTTTAAGAAGGTGGACATTGCAAAAGAAATGGTGCACTTAATGAGACCAAAAGACTTGGAAATACAAGACTGTGGGTCTTACCGCTCTTCATCGTGTTATAACCGGTATTCCAGAAAGCGTCGAACTAGCAAAATGCATGGTAGAAAAGAACAAGAAGTTACTCAGTATTGTCCTTCCTCCCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

252

Amino Acids

28.85

Weight (kDa)

6.42

Isoelectric Point (pI)

45.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4219 PF13961 15 - 41 1.1e-10 Domain of unknown function (DUF4219)
Retrotran_gag_2 PF14223 28 - 98 4e-09 gag-polypeptide of LTR copia-type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000027)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G18670 AT3G18670 AT3G54065
fragaria_vesca FvH4_1g26570 FvH4_1g26570 FvH4_5g19270 FvH4_5g19273 FvH4_5g35840 FvH4_5g36340 FvH4_5g36630 FvH4_5g37181 FvH4_5g37182 FvH4_5g37185 FvH4_5g37240 FvH4_5g37260 FvH4_6g21440 FvH4_6g44571 FvH4_6g44572 FvH4_6g44610 FvH4_6g44620 FvH4_6g44650 FvH4_6g44660 FvH4_6g45151 FvH4_6g45152 FvH4_6g45152 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45153 FvH4_6g45154 FvH4_6g51440 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090 FvH4_7g08090
malus_domestica MD00G1010300.v1.1 MD00G1010400.v1.1 MD00G1010500.v1.1 MD00G1011000.v1.1 MD00G1011200.v1.1 MD00G1011500.v1.1 MD00G1011900.v1.1 MD03G1133900.v1.1 MD03G1134100.v1.1 MD09G1086300.v1.1 MD09G1086500.v1.1 MD09G1086900.v1.1 MD09G1087000.v1.1 MD09G1088000.v1.1 MD09G1088100.v1.1 MD09G1088200.v1.1 MD09G1088300.v1.1 MD09G1089000.v1.1 MD09G1089300.v1.1 MD09G1133800.v1.1 MD16G1219400.v1.1 MD17G1027900.v1.1 MD17G1028400.v1.1 MD17G1028600.v1.1 MD17G1028700.v1.1 MD17G1028900.v1.1 MD17G1029000.v1.1 MD17G1029100.v1.1 MD17G1029200.v1.1 MD17G1075400.v1.1 MD17G1076000.v1.1 MD17G1077000.v1.1 MD17G1077100.v1.1 MD17G1077800.v1.1 MD17G1078000.v1.1 MD17G1078100.v1.1 MD17G1078300.v1.1 MD17G1100900.v1.1 MD17G1101100.v1.1 MD17G1101400.v1.1 MD17G1104200.v1.1 MD17G1104500.v1.1 MD17G1121300.v1.1 MD17G1121600.v1.1 MD17G1121900.v1.1 MD17G1122700.v1.1 MD17G1218800.v1.1
prunus_persica Prupe.2G033800_v2.0.a1 Prupe.2G033900_v2.0.a1 Prupe.2G080300_v2.0.a1 Prupe.2G080700_v2.0.a1 Prupe.2G080900_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081100_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081200_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G081700_v2.0.a1 Prupe.2G082000_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082100_v2.0.a1 Prupe.2G082200_v2.0.a1 Prupe.2G082300_v2.0.a1 Prupe.2G082700_v2.0.a1 Prupe.2G082800_v2.0.a1 Prupe.2G082900_v2.0.a1 Prupe.3G235600_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236300_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236600_v2.0.a1 Prupe.3G236800_v2.0.a1 Prupe.3G237000_v2.0.a1 Prupe.3G237100_v2.0.a1 Prupe.3G237300_v2.0.a1 Prupe.3G237400_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.3G237500_v2.0.a1 Prupe.4G282500_v2.0.a1 Prupe.4G282500_v2.0.a1
pyrus_communis pycom03g08990 pycom03g09000 pycom09g01180 pycom09g01190 pycom09g01220 pycom09g01230 pycom09g01360 pycom09g01370 pycom09g01380 pycom09g01410 pycom09g05500 pycom11g10280 pycom11g10290 pycom11g10310 pycom16g18270 pycom16g18280 pycom17g02280 pycom17g02290 pycom17g02300 pycom17g02360 pycom17g02390 pycom17g02410 pycom17g02440 pycom17g02460 pycom17g02470 pycom17g02480 pycom17g02510 pycom17g02530 pycom17g02540 pycom17g02550 pycom17g02560 pycom17g02570 pycom17g02580 pycom17g02630 pycom17g02640 pycom17g04970 pycom17g04980 pycom17g05010 pycom17g07090 pycom17g07620 pycom17g07630 pycom17g07640 pycom17g07650 pycom17g07660 pycom17g07740 pycom17g07760 pycom17g07770 pycom17g09580 pycom17g11170 pycom17g11200 pycom17g11220 pycom17g11240 pycom17g11250 pycom17g11300 pycom17g11340 pycom17g11380 pycom17g11440
rosa_chinensis RchiOBHm_Chr1g0332901 RchiOBHm_Chr1g0338981 RchiOBHm_Chr1g0338991 RchiOBHm_Chr1g0341201 RchiOBHm_Chr1g0341211 RchiOBHm_Chr1g0342721 RchiOBHm_Chr1g0343191 RchiOBHm_Chr2g0146761 RchiOBHm_Chr2g0161791 RchiOBHm_Chr2g0161801 RchiOBHm_Chr2g0161841 RchiOBHm_Chr2g0162041 RchiOBHm_Chr2g0162651 RchiOBHm_Chr2g0162691 RchiOBHm_Chr2g0162701 RchiOBHm_Chr2g0162711 RchiOBHm_Chr2g0162721 RchiOBHm_Chr2g0162811 RchiOBHm_Chr2g0162831 RchiOBHm_Chr2g0162841 RchiOBHm_Chr4g0416381 RchiOBHm_Chr4g0416391 RchiOBHm_Chr5g0075981 RchiOBHm_Chr6g0276101 RchiOBHm_Chr7g0214581 RchiOBHm_Chr7g0214631 RchiOBHm_Chr7g0214651 RchiOBHm_Chr7g0214721 RchiOBHm_Chr7g0223161 RchiOBHm_Chr7g0230661 RchiOBHm_Chr7g0230751 RchiOBHm_Chr7g0230781 RchiOBHm_Chr7g0234581 RchiOBHm_Chr7g0234601 RchiOBHm_Chr7g0237561 RchiOBHm_Chr7g0237571 RchiOBHm_Chr7g0238781 RchiOBHm_Chr7g0238811 RchiOBHm_Chr7g0242161 RchiOBHm_Chr7g0242401 RchiOBHm_Chr7g0242451 RchiOBHm_Chr7g0242921 RchiOBHm_Chr7g0242981 RchiOBHm_Chr7g0243111 RchiOBHm_Chr7g0243251 RchiOBHm_Chr7g0243331
rosa_laevigata RLG00000000803 RLG00000000807 RLG00000000809 RLG00000000811 RLG00000000814 RLG00000000854 RLG00000000859 RLG00000000864 RLG00000000994 RLG00000000995 RLG00000001458 RLG00000001461 RLG00000001474 RLG00000001476 RLG00000002729 RLG00000002730 RLG00000003505 RLG00000008871 RLG00000008873 RLG00000018513 RLG00000021300 RLG00000021303 RLG00000021318 RLG00000021356 RLG00000021357 RLG00000029070 RLG00000029071 RLG00000029171 RLG00000029189 RLG00000029190 RLG00000029640 RLG00000034635
rosa_multiflora Rmu_co8149086.1_g000001 Rmu_co8460577.1_g000001 Rmu_sc0000429.1_g000062 Rmu_sc0000429.1_g000071 Rmu_sc0000429.1_g000081 Rmu_sc0000863.1_g000020 Rmu_sc0001488.1_g000011 Rmu_sc0001545.1_g000007 Rmu_sc0001849.1_g000068 Rmu_sc0001993.1_g000003 Rmu_sc0002222.1_g000002 Rmu_sc0002308.1_g000053 Rmu_sc0002308.1_g000069 Rmu_sc0002480.1_g000007 Rmu_sc0003179.1_g000041 Rmu_sc0004213.1_g000011 Rmu_sc0007101.1_g000012 Rmu_sc0008565.1_g000011 Rmu_sc0009298.1_g000003 Rmu_sc0010407.1_g000009 Rmu_sc0010407.1_g000013 Rmu_sc0026966.1_g000004 Rmu_ssc0000152.1_g000012 Rmu_ssc0000152.1_g000014 Rmu_ssc0000295.1_g000021 Rmu_ssc0000295.1_g000026
rosa_roxburghii Rroxscaffold_1G00029600 Rroxscaffold_2G00087790 Rroxscaffold_2G00087800 Rroxscaffold_2G00088360 Rroxscaffold_2G00088500 Rroxscaffold_2G00088530 Rroxscaffold_2G00088590 Rroxscaffold_3G00221570 Rroxscaffold_3G00222190 Rroxscaffold_3G00222240 Rroxscaffold_3G00222880 Rroxscaffold_3G00222900 Rroxscaffold_3G00223990 Rroxscaffold_3G00229750 Rroxscaffold_3G00229760 Rroxscaffold_3G00245140 Rroxscaffold_3G00245150 Rroxscaffold_3G00245200 Rroxscaffold_3G00253520 Rroxscaffold_3G00253530 Rroxscaffold_4G00294500 Rroxscaffold_4G00311800 Rroxscaffold_4G00311830 Rroxscaffold_4G00311850 Rroxscaffold_4G00313180 Rroxscaffold_4G00313210 Rroxscaffold_4G00316270 Rroxscaffold_4G00317910 Rroxscaffold_4G00317920 Rroxscaffold_5G00349290 Rroxscaffold_5G00349300 Rroxscaffold_5G00349310 Rroxscaffold_5G00351950 Rroxscaffold_5G00351960 Rroxscaffold_5G00353390 Rroxscaffold_7G00192540
rosa_rugosa Rorug01G0102500 Rorug01G0102600 Rorug01G0146400.1 Rorug01G0146500.1 Rorug01G0159400.1 Rorug01G0159500.1 Rorug02G0491900 Rorug02G0492000 Rorug02G0492100 Rorug02G0492200 Rorug02G0492300 Rorug02G0492400 Rorug02G0492500 Rorug02G0492700 Rorug02G0498500 Rorug02G0498600 Rorug02G0498800 Rorug04G0006900 Rorug04G0053700 Rorug06G0002000 Rorug06G0002100 Rorug07G0304700 Rorug07G0304800 Rorug07G0304800 Rorug07G0304800 Rorug07G0305300 Rorug07G0305400 Rorug07G0305500 Rorug07G0305500 Rorug07G0318300 Rorug07G0318600 Rorug07G0323600
rosa_samantha Rh1AG128900 Rh1AG162500 Rh1AG163000 Rh1AG164000 Rh1AG164700 Rh1AG173200 Rh1AG173300 Rh1AG173800 Rh1BG098100 Rh1BG129800 Rh1BG130600 Rh1BG141300 Rh1BG141500 Rh1BG141600 Rh1CG122700 Rh1CG151900 Rh1CG152400 Rh1CG153100 Rh1CG153500 Rh1CG161400 Rh1CG161600 Rh1DG134200 Rh1DG173500 Rh1DG173700 Rh2AG558100 Rh2AG558500 Rh2AG560200 Rh2AG564700 Rh2AG564800 Rh2BG465600 Rh2BG571700 Rh2BG572000 Rh2BG573500 Rh2CG439800 Rh2CG541800 Rh2CG542100 Rh2CG542200 Rh2CG543800 Rh2CG547300 Rh2DG474700 Rh2DG580600 Rh2DG580900 Rh2DG581200 Rh2DG581700 Rh2DG581800 Rh2DG583500 Rh2DG587200 Rh2DG587300 Rh2DG587400 Rh4AG128900 Rh4AG203800 Rh4AG319900 Rh4AG320000 Rh4BG122200 Rh4BG201100 Rh4CG136000 Rh4DG122400 Rh4DG201100 Rh4DG323600 Rh6BG077000 Rh6DG206200 Rh7AG282300 Rh7AG282500 Rh7AG283400 Rh7AG358600 Rh7AG414500 Rh7AG415200 Rh7AG415500 Rh7AG461700 Rh7AG469300 Rh7AG477800 Rh7BG273900 Rh7BG274000 Rh7BG390400 Rh7BG390500 Rh7BG391500 Rh7BG391800 Rh7BG408300 Rh7BG432000 Rh7BG439200 Rh7BG449200 Rh7BG449900 Rh7BG450400 Rh7BG450500 Rh7CG220900 Rh7CG301600 Rh7CG302700 Rh7CG377000 Rh7CG433900 Rh7CG434200 Rh7CG478800 Rh7DG286200 Rh7DG354000 Rh7DG424600 Rh7DG448000 Rh7DG462800 Rh7DG462900
rosa_wichuraiana Rw0G003440 Rw0G011970 Rw0G017120 Rw0G017130 Rw0G017140 Rw0G018470 Rw0G018480 Rw0G020440 Rw1G010470 Rw2G046180 Rw2G046210 Rw2G046230 Rw2G046390 Rw2G046400 Rw2G046710 Rw2G046720 Rw2G046730 Rw3G025310 Rw4G010410 Rw4G017250 Rw6G018270 Rw7G018180 Rw7G024130 Rw7G024160 Rw7G024170 Rw7G034060 Rw7G034250 Rw7G034260 Rw7G034400 Rw7G034410 Rw7G038210 Rw7G039020 Rw7G039060 Rw7G039280 Rw7G039400 Rw7G039470 Rw7G039880 Rw7G039890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 669
AasI GACNNNNNNGTC 1 cut(s) 14
AccB1I GGYRCC 1 cut(s) 251
AccBSI CCGCTC 1 cut(s) 654
AccIII TCCGGA 1 cut(s) 210
AciI CCGC 1 cut(s) 652
AcuI CTGAAG 1 cut(s) 327
AflII CTTAAG 1 cut(s) 500
AgeI ACCGGT 1 cut(s) 672
AgsI TTSAA 2 cut(s) 164, 298
AhdI GACNNNNNGTC 1 cut(s) 643
AjnI CCWGG 1 cut(s) 272
AluBI AGCT 5 cut(s) 14, 173, 305, 449, 496
AluI AGCT 5 cut(s) 14, 173, 305, 449, 496
Alw21I GWGCWC 1 cut(s) 606
Alw26I GTCTC 1 cut(s) 607
Alw44I GTGCAC 1 cut(s) 602
AlwNI CAGNNNCTG 1 cut(s) 524
Aor13HI TCCGGA 1 cut(s) 210
ApaLI GTGCAC 1 cut(s) 602
ApeKI GCWGC 1 cut(s) 485
AsiGI ACCGGT 1 cut(s) 672
AsuC2I CCSGG 1 cut(s) 331
AsuHPI GGTGA 2 cut(s) 167, 485
BaeGI GKGCMC 2 cut(s) 254, 606
BanI GGYRCC 1 cut(s) 251
BbsI GAAGAC 1 cut(s) 435
Bbv12I GWGCWC 1 cut(s) 606
BbvI GCAGC 1 cut(s) 472
BccI CCATC 1 cut(s) 146
BciT130I CCWGG 1 cut(s) 274
BciVI GTATCC 1 cut(s) 223
BcnI CCSGG 1 cut(s) 331
BcoDI GTCTC 1 cut(s) 607
BfaI CTAG 1 cut(s) 696
BfrI CTTAAG 1 cut(s) 500
BfuI GTATCC 1 cut(s) 223
BglII AGATCT 1 cut(s) 103
BisI GCNGC 1 cut(s) 486
BlsI GCNGC 1 cut(s) 487
Bme1390I CCNGG 2 cut(s) 274, 331
BmeRI GACNNNNNGTC 1 cut(s) 643
BmiI GGNNCC 2 cut(s) 253, 328
BmrFI CCNGG 2 cut(s) 274, 331
BmrI ACTGGG 1 cut(s) 568
BmsI GCATC 3 cut(s) 320, 385, 472
BmuI ACTGGG 1 cut(s) 568
BpiI GAAGAC 1 cut(s) 435
BpuMI CCSGG 1 cut(s) 331
BsaI GGTCTC 1 cut(s) 607
BsaJI CCNNGG 3 cut(s) 192, 330, 513
BsaWI WCCGGW 2 cut(s) 210, 672
BsaXI ACNNNNNCTCC 4 cut(s) 121, 151, 169, 199
Bse118I RCCGGY 1 cut(s) 672
Bse1I ACTGG 1 cut(s) 563
Bse3DI GCAATG 2 cut(s) 495, 585
BseAI TCCGGA 1 cut(s) 210
BseBI CCWGG 1 cut(s) 274
BseDI CCNNGG 3 cut(s) 192, 330, 513
BseGI GGATG 4 cut(s) 207, 311, 487, 508
BseMI GCAATG 2 cut(s) 495, 585
BseMII CTCAG 2 cut(s) 123, 746
BseNI ACTGG 1 cut(s) 563
BseSI GKGCMC 2 cut(s) 254, 606
BseXI GCAGC 1 cut(s) 472
BshNI GGYRCC 1 cut(s) 251
BshTI ACCGGT 1 cut(s) 672
BsiHKAI GWGCWC 1 cut(s) 606
BsiSI CCGG 3 cut(s) 211, 330, 673
BslFI GGGAC 3 cut(s) 2, 125, 559
BsmAI GTCTC 1 cut(s) 607
BsmFI GGGAC 3 cut(s) 2, 125, 559
BsmI GAATGC 1 cut(s) 563
Bso31I GGTCTC 1 cut(s) 607
Bsp1286I GDGCHC 2 cut(s) 254, 606
Bsp13I TCCGGA 1 cut(s) 210
Bsp143I GATC 1 cut(s) 103
BspACI CCGC 1 cut(s) 652
BspCNI CTCAG 2 cut(s) 124, 745
BspEI TCCGGA 1 cut(s) 210
BspLI GGNNCC 2 cut(s) 253, 328
BspQI GCTCTTC 1 cut(s) 661
BspT107I GGYRCC 1 cut(s) 251
BspTI CTTAAG 1 cut(s) 500
BspTNI GGTCTC 1 cut(s) 607
BsrBI CCGCTC 1 cut(s) 654
BsrDI GCAATG 2 cut(s) 495, 585
BsrFI RCCGGY 1 cut(s) 672
BsrI ACTGG 1 cut(s) 563
BssAI RCCGGY 1 cut(s) 672
BssECI CCNNGG 3 cut(s) 192, 330, 513
BssMI GATC 1 cut(s) 103
BssT1I CCWWGG 1 cut(s) 513
Bst2UI CCWGG 1 cut(s) 274
Bst4CI ACNGT 1 cut(s) 641
Bst6I CTCTTC 2 cut(s) 176, 661
BstAFI CTTAAG 1 cut(s) 500
BstAPI GCANNNNNTGC 1 cut(s) 524
BstC8I GCNNGC 1 cut(s) 303
BstDEI CTNAG 2 cut(s) 132, 732
BstF5I GGATG 4 cut(s) 207, 311, 487, 508
BstKTI GATC 1 cut(s) 106
BstMAI GTCTC 1 cut(s) 607
BstMBI GATC 1 cut(s) 103
BstMWI GCNNNNNNNGC 4 cut(s) 269, 317, 502, 524
BstNI CCWGG 1 cut(s) 274
BstSCI CCNGG 2 cut(s) 272, 329
BstSLI GKGCMC 2 cut(s) 254, 606
BstV1I GCAGC 1 cut(s) 472
BstV2I GAAGAC 1 cut(s) 435
BstX2I RGATCY 1 cut(s) 103
BstYI RGATCY 1 cut(s) 103
BsuI GTATCC 1 cut(s) 223
BtsCI GGATG 4 cut(s) 207, 311, 487, 508
BtsIMutI CAGTG 2 cut(s) 129, 556
Cac8I GCNNGC 1 cut(s) 303
CaiI CAGNNNCTG 1 cut(s) 524
Cfr10I RCCGGY 1 cut(s) 672
CseI GACGC 1 cut(s) 677
CspAI ACCGGT 1 cut(s) 672
CviAII CATG 1 cut(s) 707
DdeI CTNAG 2 cut(s) 132, 732
DpnI GATC 1 cut(s) 105
DpnII GATC 1 cut(s) 103
DrdI GACNNNNNNGTC 1 cut(s) 14
DriI GACNNNNNGTC 1 cut(s) 643
DseDI GACNNNNNNGTC 1 cut(s) 14
Eam1104I CTCTTC 2 cut(s) 176, 661
Eam1105I GACNNNNNGTC 1 cut(s) 643
EarI CTCTTC 2 cut(s) 176, 661
Eco130I CCWWGG 1 cut(s) 513
Eco31I GGTCTC 1 cut(s) 607
Eco57I CTGAAG 1 cut(s) 327
EcoRII CCWGG 1 cut(s) 272
EcoT14I CCWWGG 1 cut(s) 513
EcoT22I ATGCAT 2 cut(s) 459, 708
ErhI CCWWGG 1 cut(s) 513
FaeI CATG 1 cut(s) 710
FaiI YATR 9 cut(s) 36, 60, 168, 279, 338, 401, 455, 669, 708
FaqI GGGAC 3 cut(s) 2, 125, 559
FatI CATG 1 cut(s) 706
Fnu4HI GCNGC 1 cut(s) 486
FokI GGATG 4 cut(s) 194, 298, 494, 495
Fsp4HI GCNGC 1 cut(s) 486
FspBI CTAG 1 cut(s) 696
GluI GCNGC 1 cut(s) 486
HapII CCGG 3 cut(s) 211, 330, 673
HgaI GACGC 1 cut(s) 677
Hin1II CATG 1 cut(s) 710
HinfI GANTC 1 cut(s) 407
HpaII CCGG 3 cut(s) 211, 330, 673
HphI GGTGA 2 cut(s) 167, 485
Hpy166II GTNNAC 2 cut(s) 583, 604
Hpy188III TCNNGA 4 cut(s) 211, 463, 681, 750
Hpy8I GTNNAC 2 cut(s) 583, 604
Hpy99I CGWCG 1 cut(s) 693
HpyAV CCTTC 4 cut(s) 413, 533, 571, 753
HpyCH4III ACNGT 1 cut(s) 641
HpyCH4IV ACGT 1 cut(s) 438
HpyCH4V TGCA 7 cut(s) 202, 457, 488, 527, 590, 604, 706
HpyF10VI GCNNNNNNNGC 4 cut(s) 269, 317, 502, 524
HpyF3I CTNAG 2 cut(s) 132, 732
HpySE526I ACGT 1 cut(s) 438
Hsp92II CATG 1 cut(s) 710
Kpn2I TCCGGA 1 cut(s) 210
Kzo9I GATC 1 cut(s) 103
LguI GCTCTTC 1 cut(s) 661
LmnI GCTCC 1 cut(s) 493
Lsp1109I GCAGC 1 cut(s) 472
LweI GCATC 3 cut(s) 320, 385, 472
MaeI CTAG 1 cut(s) 696
MaeII ACGT 1 cut(s) 438
MaeIII GTNAC 2 cut(s) 520, 727
MalI GATC 1 cut(s) 105
MbiI CCGCTC 1 cut(s) 654
MboI GATC 1 cut(s) 103
MboII GAAGA 6 cut(s) 161, 193, 416, 440, 545, 648
MflI RGATCY 1 cut(s) 103
MhlI GDGCHC 2 cut(s) 254, 606
MluCI AATT 3 cut(s) 27, 531, 549
MmeI TCCRAC 1 cut(s) 366
MnlI CCTC 5 cut(s) 147, 171, 187, 220, 462
Mph1103I ATGCAT 2 cut(s) 459, 708
MroI TCCGGA 1 cut(s) 210
MseI TTAA 6 cut(s) 26, 81, 441, 501, 573, 608
MspA1I CMGCKG 2 cut(s) 14, 305
MspCI CTTAAG 1 cut(s) 500
MspI CCGG 3 cut(s) 211, 330, 673
MspR9I CCNGG 2 cut(s) 274, 331
Mva1269I GAATGC 1 cut(s) 563
MvaI CCWGG 1 cut(s) 274
MwoI GCNNNNNNNGC 4 cut(s) 269, 317, 502, 524
NciI CCSGG 1 cut(s) 331
NdeII GATC 1 cut(s) 103
NlaIII CATG 1 cut(s) 710
NlaIV GGNNCC 2 cut(s) 253, 328
NmeAIII GCCGAG 1 cut(s) 217
NsiI ATGCAT 2 cut(s) 459, 708
PciSI GCTCTTC 1 cut(s) 661
PctI GAATGC 1 cut(s) 563
PfeI GAWTC 1 cut(s) 407
PinAI ACCGGT 1 cut(s) 672
PkrI GCNGC 1 cut(s) 487
PsiI TTATAA 1 cut(s) 669
Psp6I CCWGG 1 cut(s) 272
PspGI CCWGG 1 cut(s) 272
PspN4I GGNNCC 2 cut(s) 253, 328
PstNI CAGNNNCTG 1 cut(s) 524
PsuI RGATCY 1 cut(s) 103
PvuII CAGCTG 2 cut(s) 14, 305
SapI GCTCTTC 1 cut(s) 661
SaqAI TTAA 6 cut(s) 26, 81, 441, 501, 573, 608
SatI GCNGC 1 cut(s) 486
Sau3AI GATC 1 cut(s) 103
ScrFI CCNGG 2 cut(s) 274, 331
SduI GDGCHC 2 cut(s) 254, 606
SfaNI GCATC 3 cut(s) 320, 385, 472
SmlI CTYRAG 1 cut(s) 500
SmoI CTYRAG 1 cut(s) 500
Sse9I AATT 3 cut(s) 27, 531, 549
SsiI CCGC 1 cut(s) 652
SspMI CTAG 1 cut(s) 696
StyD4I CCNGG 2 cut(s) 272, 329
StyI CCWWGG 1 cut(s) 513
TaaI ACNGT 1 cut(s) 641
TaiI ACGT 1 cut(s) 441
TaqI TCGA 2 cut(s) 414, 691
TasI AATT 3 cut(s) 27, 531, 549
TfiI GAWTC 1 cut(s) 407
Tru1I TTAA 6 cut(s) 26, 81, 441, 501, 573, 608
Tru9I TTAA 6 cut(s) 26, 81, 441, 501, 573, 608
TscAI CASTG 2 cut(s) 136, 563
TseI GCWGC 1 cut(s) 485
TspDTI ATGAA 5 cut(s) 23, 75, 196, 432, 648
TspRI CASTG 2 cut(s) 136, 563
Vha464I CTTAAG 1 cut(s) 500
VneI GTGCAC 1 cut(s) 602
XspI CTAG 1 cut(s) 696
Zsp2I ATGCAT 2 cut(s) 459, 708
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.