protein ubiquitination
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PGG | PF13962 | 43 - 153 | 2.1e-23 | Domain of unknown function |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 22 |
| AccB1I | GGYRCC | 1 cut(s) | 22 |
| AclWI | GGATC | 1 cut(s) | 491 |
| AfaI | GTAC | 2 cut(s) | 24, 151 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 412 |
| AgsI | TTSAA | 1 cut(s) | 32 |
| AjnI | CCWGG | 2 cut(s) | 205, 583 |
| Alw21I | GWGCWC | 1 cut(s) | 166 |
| Alw26I | GTCTC | 1 cut(s) | 554 |
| AlwI | GGATC | 1 cut(s) | 491 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 74, 206 |
| Asp718I | GGTACC | 1 cut(s) | 22 |
| AspLEI | GCGC | 1 cut(s) | 73 |
| AspS9I | GGNCC | 1 cut(s) | 581 |
| AsuHPI | GGTGA | 4 cut(s) | 166, 233, 325, 394 |
| AvaII | GGWCC | 1 cut(s) | 581 |
| BaeGI | GKGCMC | 1 cut(s) | 451 |
| BanI | GGYRCC | 1 cut(s) | 22 |
| Bbv12I | GWGCWC | 1 cut(s) | 166 |
| BccI | CCATC | 2 cut(s) | 185, 424 |
| BciT130I | CCWGG | 2 cut(s) | 207, 585 |
| BcoDI | GTCTC | 1 cut(s) | 554 |
| BfmI | CTRYAG | 1 cut(s) | 189 |
| BfoI | RGCGCY | 1 cut(s) | 74 |
| Bme1390I | CCNGG | 2 cut(s) | 207, 585 |
| Bme18I | GGWCC | 1 cut(s) | 581 |
| BmgT120I | GGNCC | 1 cut(s) | 581 |
| BmiI | GGNNCC | 1 cut(s) | 24 |
| BmrFI | CCNGG | 2 cut(s) | 207, 585 |
| BmsI | GCATC | 1 cut(s) | 528 |
| BsaJI | CCNNGG | 1 cut(s) | 611 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 412 |
| Bse1I | ACTGG | 2 cut(s) | 236, 518 |
| BseBI | CCWGG | 2 cut(s) | 207, 585 |
| BseDI | CCNNGG | 1 cut(s) | 611 |
| BseGI | GGATG | 1 cut(s) | 543 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 412 |
| BseMII | CTCAG | 1 cut(s) | 485 |
| BseNI | ACTGG | 2 cut(s) | 236, 518 |
| BseRI | GAGGAG | 1 cut(s) | 125 |
| BseSI | GKGCMC | 1 cut(s) | 451 |
| BshNI | GGYRCC | 1 cut(s) | 22 |
| BsiHKAI | GWGCWC | 1 cut(s) | 166 |
| BslFI | GGGAC | 1 cut(s) | 148 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 412 |
| BsmAI | GTCTC | 1 cut(s) | 554 |
| BsmFI | GGGAC | 1 cut(s) | 148 |
| BsmI | GAATGC | 2 cut(s) | 194, 231 |
| Bsp1286I | GDGCHC | 2 cut(s) | 166, 451 |
| Bsp1407I | TGTACA | 1 cut(s) | 149 |
| Bsp143I | GATC | 1 cut(s) | 483 |
| BspCNI | CTCAG | 1 cut(s) | 486 |
| BspHI | TCATGA | 1 cut(s) | 261 |
| BspLI | GGNNCC | 1 cut(s) | 24 |
| BspPI | GGATC | 1 cut(s) | 491 |
| BspT107I | GGYRCC | 1 cut(s) | 22 |
| BsrGI | TGTACA | 1 cut(s) | 149 |
| BsrI | ACTGG | 2 cut(s) | 236, 518 |
| BssECI | CCNNGG | 1 cut(s) | 611 |
| BssMI | GATC | 1 cut(s) | 483 |
| BssT1I | CCWWGG | 1 cut(s) | 611 |
| Bst2UI | CCWGG | 2 cut(s) | 207, 585 |
| Bst4CI | ACNGT | 2 cut(s) | 154, 202 |
| BstAUI | TGTACA | 1 cut(s) | 149 |
| BstDEI | CTNAG | 1 cut(s) | 494 |
| BstF5I | GGATG | 1 cut(s) | 543 |
| BstH2I | RGCGCY | 1 cut(s) | 74 |
| BstHHI | GCGC | 1 cut(s) | 73 |
| BstKTI | GATC | 1 cut(s) | 486 |
| BstMAI | GTCTC | 1 cut(s) | 554 |
| BstMBI | GATC | 1 cut(s) | 483 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 43, 422 |
| BstNI | CCWGG | 2 cut(s) | 207, 585 |
| BstSCI | CCNGG | 2 cut(s) | 205, 583 |
| BstSFI | CTRYAG | 1 cut(s) | 189 |
| BstSLI | GKGCMC | 1 cut(s) | 451 |
| BtsCI | GGATG | 1 cut(s) | 543 |
| BtsIMutI | CAGTG | 2 cut(s) | 243, 525 |
| CaiI | CAGNNNCTG | 2 cut(s) | 74, 206 |
| CciI | TCATGA | 1 cut(s) | 261 |
| CfoI | GCGC | 1 cut(s) | 73 |
| Cfr13I | GGNCC | 1 cut(s) | 581 |
| Csp6I | GTAC | 2 cut(s) | 23, 150 |
| CviAII | CATG | 5 cut(s) | 38, 181, 262, 467, 480 |
| CviJI | RGCY | 1 cut(s) | 416 |
| CviKI_1 | RGCY | 1 cut(s) | 416 |
| CviQI | GTAC | 2 cut(s) | 23, 150 |
| DdeI | CTNAG | 1 cut(s) | 494 |
| DpnI | GATC | 1 cut(s) | 485 |
| DpnII | GATC | 1 cut(s) | 483 |
| Eco130I | CCWWGG | 1 cut(s) | 611 |
| Eco47I | GGWCC | 1 cut(s) | 581 |
| EcoRII | CCWGG | 2 cut(s) | 205, 583 |
| EcoT14I | CCWWGG | 1 cut(s) | 611 |
| EcoT22I | ATGCAT | 1 cut(s) | 39 |
| ErhI | CCWWGG | 1 cut(s) | 611 |
| FaeI | CATG | 5 cut(s) | 41, 184, 265, 470, 483 |
| FaqI | GGGAC | 1 cut(s) | 148 |
| FatI | CATG | 5 cut(s) | 37, 180, 261, 466, 479 |
| FokI | GGATG | 1 cut(s) | 550 |
| GlaI | GCGC | 1 cut(s) | 72 |
| HaeII | RGCGCY | 1 cut(s) | 74 |
| HhaI | GCGC | 1 cut(s) | 73 |
| Hin1II | CATG | 5 cut(s) | 41, 184, 265, 470, 483 |
| Hin6I | GCGC | 1 cut(s) | 71 |
| HinP1I | GCGC | 1 cut(s) | 71 |
| HinfI | GANTC | 1 cut(s) | 330 |
| HphI | GGTGA | 4 cut(s) | 166, 233, 325, 394 |
| Hpy166II | GTNNAC | 1 cut(s) | 91 |
| Hpy188I | TCNGA | 2 cut(s) | 280, 495 |
| Hpy188III | TCNNGA | 2 cut(s) | 262, 559 |
| Hpy8I | GTNNAC | 1 cut(s) | 91 |
| HpyCH4III | ACNGT | 2 cut(s) | 154, 202 |
| HpyCH4IV | ACGT | 1 cut(s) | 343 |
| HpyCH4V | TGCA | 6 cut(s) | 4, 37, 140, 350, 509, 541 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 43, 422 |
| HpyF3I | CTNAG | 1 cut(s) | 494 |
| HpySE526I | ACGT | 1 cut(s) | 343 |
| Hsp92II | CATG | 5 cut(s) | 41, 184, 265, 470, 483 |
| HspAI | GCGC | 1 cut(s) | 71 |
| KpnI | GGTACC | 1 cut(s) | 26 |
| Kzo9I | GATC | 1 cut(s) | 483 |
| LpnPI | CCDG | 8 cut(s) | 87, 192, 213, 219, 249, 531, 570, 597 |
| LweI | GCATC | 1 cut(s) | 528 |
| MaeII | ACGT | 1 cut(s) | 343 |
| MaeIII | GTNAC | 5 cut(s) | 55, 172, 221, 288, 433 |
| MalI | GATC | 1 cut(s) | 485 |
| MboI | GATC | 1 cut(s) | 483 |
| MboII | GAAGA | 2 cut(s) | 291, 482 |
| MhlI | GDGCHC | 2 cut(s) | 166, 451 |
| MluCI | AATT | 2 cut(s) | 62, 384 |
| MnlI | CCTC | 5 cut(s) | 103, 106, 344, 535, 558 |
| Mph1103I | ATGCAT | 1 cut(s) | 39 |
| MseI | TTAA | 1 cut(s) | 104 |
| MslI | CAYNNNNRTG | 2 cut(s) | 179, 236 |
| MspR9I | CCNGG | 2 cut(s) | 207, 585 |
| Mva1269I | GAATGC | 2 cut(s) | 194, 231 |
| MvaI | CCWGG | 2 cut(s) | 207, 585 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 43, 422 |
| NdeII | GATC | 1 cut(s) | 483 |
| NlaIII | CATG | 5 cut(s) | 41, 184, 265, 470, 483 |
| NlaIV | GGNNCC | 1 cut(s) | 24 |
| NmuCI | GTSAC | 4 cut(s) | 172, 221, 288, 433 |
| NsiI | ATGCAT | 1 cut(s) | 39 |
| PagI | TCATGA | 1 cut(s) | 261 |
| PctI | GAATGC | 2 cut(s) | 194, 231 |
| PfeI | GAWTC | 1 cut(s) | 330 |
| Psp6I | CCWGG | 2 cut(s) | 205, 583 |
| PspGI | CCWGG | 2 cut(s) | 205, 583 |
| PspN4I | GGNNCC | 1 cut(s) | 24 |
| PspPI | GGNCC | 1 cut(s) | 581 |
| PstNI | CAGNNNCTG | 2 cut(s) | 74, 206 |
| RsaI | GTAC | 2 cut(s) | 24, 151 |
| RsaNI | GTAC | 2 cut(s) | 23, 150 |
| RseI | CAYNNNNRTG | 2 cut(s) | 179, 236 |
| SaqAI | TTAA | 1 cut(s) | 104 |
| Sau3AI | GATC | 1 cut(s) | 483 |
| Sau96I | GGNCC | 1 cut(s) | 581 |
| ScrFI | CCNGG | 2 cut(s) | 207, 585 |
| SduI | GDGCHC | 2 cut(s) | 166, 451 |
| SetI | ASST | 4 cut(s) | 28, 346, 397, 613 |
| SfaNI | GCATC | 1 cut(s) | 528 |
| SfcI | CTRYAG | 1 cut(s) | 189 |
| SinI | GGWCC | 1 cut(s) | 581 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 179, 236 |
| Sse9I | AATT | 2 cut(s) | 62, 384 |
| SspI | AATATT | 2 cut(s) | 476, 591 |
| StyD4I | CCNGG | 2 cut(s) | 205, 583 |
| StyI | CCWWGG | 1 cut(s) | 611 |
| TaaI | ACNGT | 2 cut(s) | 154, 202 |
| TaiI | ACGT | 1 cut(s) | 346 |
| TaqI | TCGA | 1 cut(s) | 558 |
| TasI | AATT | 2 cut(s) | 62, 384 |
| TatI | WGTACW | 1 cut(s) | 149 |
| TfiI | GAWTC | 1 cut(s) | 330 |
| Tru1I | TTAA | 1 cut(s) | 104 |
| Tru9I | TTAA | 1 cut(s) | 104 |
| TscAI | CASTG | 2 cut(s) | 243, 525 |
| TseFI | GTSAC | 4 cut(s) | 172, 221, 288, 433 |
| Tsp45I | GTSAC | 4 cut(s) | 172, 221, 288, 433 |
| TspDTI | ATGAA | 6 cut(s) | 143, 232, 250, 455, 468, 556 |
| TspRI | CASTG | 2 cut(s) | 243, 525 |
| VpaK11BI | GGWCC | 1 cut(s) | 581 |
| Zsp2I | ATGCAT | 1 cut(s) | 39 |